>TBC2_CHLRE (Q8VXP3) Tbc2 translation factor, chloroplast precursor|
          Length = 1115

 Score = 30.8 bits (68), Expect = 0.90
 Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 19/84 (22%)
 Frame = +1

Query: 70   LTAAAAGNELRSLLAATLSADK---------TSVDAATAGLDRISAAGDPRFPIALLAVA 222
            LT A +  +L  L AA   AD           +  AA AG    +AAGD    ++ +  A
Sbjct: 898  LTLAVSLAQLHQLHAAGAVADTPLLLPGAAAAAAAAAPAGASSAAAAGDSPAALSAVPAA 957

Query: 223  AGDG----------DQGTRIAAAA 264
            AGDG          D GT   AAA
Sbjct: 958  AGDGALVPSFMSIDDDGTAAVAAA 981

>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)|
          Length = 3164

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
 Frame = +1

Query: 73   TAAAAGNELRSLLAATLSADKTSVDAATAGLDRISAAGDPRFPIALLAVAAGDGD---QG 243
            +AA A  +  S + A + A +  VDA TA     +AA DP  P+A LA  A       + 
Sbjct: 1179 SAAVATADPASTVDAAVRAHRVLVDAVTA---LGAAASDPASPLAFLAAMADSAAGYVKA 1235

Query: 244  TRIAAAAYLKI 276
            TR+A  A + I
Sbjct: 1236 TRLALDARVAI 1246

>SPER_STRPU (P16264) Egg peptide speract receptor precursor|
          Length = 532

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
 Frame = +1

Query: 1   KKGGKRQRTS*GLLCSMEVDAAYL----TAAAAGNELRSLLAATLSADKTSVDAATAGLD 168
           K G  R   S  +    +++A ++    T +   NE  S     +SAD T        + 
Sbjct: 425 KWGASRAAGSAEVSAPFDLEAPFIIDGITCSGVENETLSQCQMKVSADMTCATGDVGVVC 484

Query: 169 RISAAGDPRFPIALLAVAAGDGDQGTRIAAAAYLKIFARRNMEGG 303
             S A      IA++  AAG G  G  +AA A+  I   +   GG
Sbjct: 485 EGSTAPPSGMSIAVIGGAAGGGVAGLAVAAFAFYYIKFVKPAGGG 529

>MMPL3_MYCTU (O53657) Putative membrane protein mmpL3|
          Length = 944

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 9/62 (14%)
 Frame = +1

Query: 79   AAAGNELRSLLAATLSADKTSVDAATAGLDRI---------SAAGDPRFPIALLAVAAGD 231
            AAAG  ++S  A+T     T   A +AG  R           AAGDP  P A L +   D
Sbjct: 844  AAAGRSVQSP-ASTPPPTPTPPSAPSAGQTRAMPLAANRSTDAAGDPAEPTAALPIIRSD 902

Query: 232  GD 237
            GD
Sbjct: 903  GD 904

>UTH1_YEAST (P36135) Protein UTH1|
          Length = 450

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +1

Query: 61  AAYLTAAAAGNELRSLLAATLSADKTSVDAATAGLDRISAAGDPRFPIALLAVAAGDGDQ 240
           A   T+AAA  ++ S+ AAT +   T+  AAT      S++       +  +V +GD + 
Sbjct: 138 ATTATSAAADGKVESVAAATTTLSSTAA-AATTSAAASSSSSSSSSSSSSSSVGSGDFED 196

Query: 241 GT 246
           GT
Sbjct: 197 GT 198

>AMI3_MYCLE (O33040) Putative amidase amiC (EC 3.5.1.4)|
          Length = 468

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = +1

Query: 34  GLLCSMEVDAAYLTAAAAGNELRSLLAATLSADKTSVDAATAGLDRISAAGDPRFPIALL 213
           GLL +M+V    L   A GN            D+T +D+ T GLDR ++    R P A++
Sbjct: 311 GLLAAMQVRTGRL---AFGNTF----------DRTKLDSLTLGLDRHASRNMHRLPKAIM 357

>CH60_THEBR (Q60024) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 540

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 139 SVDAATAGLDRISAAGDPRFPIALLA-VAAGDGDQGTRIAAA 261
           +VDAA  GL RIS   D +  IA +A ++A D + G  IA A
Sbjct: 121 AVDAAVEGLKRISKPIDNKESIAHVASISAADEEIGKLIAEA 162


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,882,184
Number of Sequences: 219361
Number of extensions: 287124
Number of successful extensions: 984
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)