ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl50a09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-ass... 31 1.8
2KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-ass... 31 1.8
3KRA59_HUMAN (P26371) Keratin-associated protein 5-9 (Keratin-ass... 30 3.1
4GCSP_ARATH (O80988) Glycine dehydrogenase [decarboxylating], mit... 29 6.8
5KRUC_SHEEP (P26372) Keratin, ultra high-sulfur matrix protein (U... 28 8.9
6PSV_DICDI (P08798) Prespore vesicle protein precursor (PSV) 28 8.9

>KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-associated protein|
           5.6) (Ultrahigh sulfur keratin-associated protein 5.6)
          Length = 129

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = -2

Query: 111 CSAGCAWECAFVDWIGVRGAARVCGSSCCWAFLCC 7
           CS GC   C      G       CGSSCC    CC
Sbjct: 6   CSGGCGSGCG-----GCGSGCGGCGSSCCVPICCC 35



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>KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-associated protein|
           5.8) (Ultrahigh sulfur keratin-associated protein 5.8)
           (Keratin, ultra high-sulfur matrix protein B) (UHS
           keratin B) (UHS KerB)
          Length = 187

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = -2

Query: 111 CSAGCAWECAFVDWIGVRGAARVCGSSCCWAFLCC 7
           CS GC   C      G       CGSSCC    CC
Sbjct: 6   CSGGCGSGCG-----GCGSGCGGCGSSCCVPICCC 35



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>KRA59_HUMAN (P26371) Keratin-associated protein 5-9 (Keratin-associated protein|
           5.9) (Ultrahigh sulfur keratin-associated protein 5.9)
           (Keratin, cuticle, ultrahigh sulfur 1) (Keratin, ultra
           high-sulfur matrix protein A) (UHS keratin A) (UHS KerA)
          Length = 169

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
 Frame = -2

Query: 111 CSAGCAWECAFVDW-IGVRGAA-RVCGSSCCWAFLCC 7
           CS GC   C   D   G  G+  R CG SCC    CC
Sbjct: 6   CSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCC 42



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>GCSP_ARATH (O80988) Glycine dehydrogenase [decarboxylating], mitochondrial|
           precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine
           cleavage system P-protein)
          Length = 1044

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 2   SKQHRNAQQQLLPHTRAAPRTPIQSTNAHSHAQPAEQRTDFT 127
           +K+HRN +  LLP T   P   + S ++  H +     + FT
Sbjct: 20  TKRHRNGESSLLPTTTVTPSRYVSSVSSFLHRRRDVSGSAFT 61



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>KRUC_SHEEP (P26372) Keratin, ultra high-sulfur matrix protein (UHS keratin)|
          Length = 182

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = -2

Query: 111 CSAGCAWECAFVDWIGVRGAARVCGSSCCWAFLCC 7
           CS GC   C      G       C SSCC    CC
Sbjct: 6   CSGGCGSSCG-----GCGSRCGGCSSSCCVPVCCC 35



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>PSV_DICDI (P08798) Prespore vesicle protein precursor (PSV)|
          Length = 513

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +2

Query: 8   QHRNAQQQLLPHTRAAPRTPIQSTNAHSHAQPAEQRTDFT 127
           QH  AQQ   P    A + P+Q   A  HA+PA +    T
Sbjct: 420 QHNAAQQHAKPAAHTAAK-PVQHNAAQQHAKPAAKPAKLT 458


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,750,408
Number of Sequences: 219361
Number of extensions: 601644
Number of successful extensions: 2160
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2153
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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