Clone Name | bastl47h10 |
---|---|
Clone Library Name | barley_pub |
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16 Length = 349635 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 89 ctctggcaccggcaacggcctcctca 114 ||||||| |||||||||||||||||| Sbjct: 256544 ctctggctccggcaacggcctcctca 256569
>gb|AC096625.25| Mus musculus strain C57BL/6J clone rp23-388i7 map 1, complete sequence Length = 191415 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 gcctcatcagctgcggcggctacc 66 ||||||||||||||||| |||||| Sbjct: 49794 gcctcatcagctgcggctgctacc 49817
>gb|AC163613.5| Mus musculus BAC clone RP24-150N2 from chromosome 1, complete sequence Length = 135256 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 gcctcatcagctgcggcggctacc 66 ||||||||||||||||| |||||| Sbjct: 676 gcctcatcagctgcggctgctacc 653
>gb|AC091158.11| Mus musculus Strain C57BL6/J chromosome 6 BAC, RP23-109E8, Complete Sequence, complete sequence Length = 195048 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 agaagcaaagctccagaagc 86 |||||||||||||||||||| Sbjct: 187805 agaagcaaagctccagaagc 187824
>gb|AC117392.4| Homo sapiens 3 BAC RP11-6F2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147520 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gacaccagcctcatcagctg 55 |||||||||||||||||||| Sbjct: 6708 gacaccagcctcatcagctg 6689
>dbj|AK125374.1| Homo sapiens cDNA FLJ43384 fis, clone OCBBF2006148, moderately similar to P53-BINDING PROTEIN 2 Length = 3137 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 gaagcttctctggcaccggc 101 |||||||||||||||||||| Sbjct: 88 gaagcttctctggcaccggc 69
>gb|AC025475.5| Homo sapiens chromosome 5 clone RP11-351N6, complete sequence Length = 186462 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gctgctgccaagacaccagc 44 |||||||||||||||||||| Sbjct: 9060 gctgctgccaagacaccagc 9041
>gb|AC113431.2| Homo sapiens chromosome 5 clone RP11-90F2, complete sequence Length = 156789 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gctgctgccaagacaccagc 44 |||||||||||||||||||| Sbjct: 148737 gctgctgccaagacaccagc 148718
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 acggcctcctcaccgcgggtgtag 126 |||||||||||||||| ||||||| Sbjct: 3985224 acggcctcctcaccgccggtgtag 3985247
>emb|AL049840.8|CNS0000K Human chromosome 14 DNA sequence BAC R-73M18 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 165617 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 gaagcttctctggcaccggc 101 |||||||||||||||||||| Sbjct: 109196 gaagcttctctggcaccggc 109177
>gb|AC138622.4| Mus musculus BAC clone RP23-100J15 from chromosome 6, complete sequence Length = 194611 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 agaagcaaagctccagaagc 86 |||||||||||||||||||| Sbjct: 49613 agaagcaaagctccagaagc 49632
>dbj|AB070950.1| Streptomyces avermitilis peptide-1 biosynthetic gene cluster Length = 21391 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 103 acggcctcctcaccgcgggtgtag 126 |||||||||||||||| ||||||| Sbjct: 10968 acggcctcctcaccgccggtgtag 10945 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,663,700 Number of Sequences: 3902068 Number of extensions: 1663700 Number of successful extensions: 105723 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 105636 Number of HSP's gapped (non-prelim): 87 length of query: 202 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 180 effective length of database: 17,147,199,772 effective search space: 3086495958960 effective search space used: 3086495958960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)