Clone Information

BLAST Search Result

Clone Name	bastl47h05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	SEC9_KLULA (Q6CSD1) Protein transport protein SEC9	42	0.001
2	NU100_YEAST (Q02629) Nucleoporin NUP100/NSP100 (Nuclear pore pro...	40	0.004
3	NUP98_RAT (P49793) Nuclear pore complex protein Nup98 (Nucleopor...	39	0.007
4	NU153_RAT (P49791) Nuclear pore complex protein Nup153 (Nucleopo...	38	0.015
5	NU116_YEAST (Q02630) Nucleoporin NUP116/NSP116 (Nuclear pore pro...	37	0.025
6	NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleo...	37	0.033
7	YAUF_SCHPO (Q10168) Hypothetical protein C26A3.15c in chromosome I	35	0.073
8	BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-assoc...	34	0.16
9	NUP98_HUMAN (P52948) Nuclear pore complex protein Nup98-Nup96 pr...	34	0.16
10	ESAM_HUMAN (Q96AP7) Endothelial cell-selective adhesion molecule...	34	0.21
11	NU214_DROME (Q9W1X4) Nuclear pore complex protein Nup214 (Nucleo...	33	0.36
12	BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associa...	33	0.47
13	NU153_HUMAN (P49790) Nuclear pore complex protein Nup153 (Nucleo...	33	0.47
14	NU189_SCHPO (Q9UTK4) Nucleoporin nup189 (Nuclear pore protein nu...	33	0.47
15	FGD1_MOUSE (P52734) FYVE, RhoGEF and PH domain-containing protei...	32	0.62
16	IF2_LEIXX (Q6AG49) Translation initiation factor IF-2	32	0.80
17	LRP2_HHV1F (P17589) Latency-related protein 2	32	0.80
18	NUPL1_DROME (Q9VDV3) Probable nucleoporin Nup58	32	1.0
19	NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nu...	32	1.0
20	LP61_EIMTE (P15714) Antigen LPMC-61 (Fragment)	32	1.0
21	ESAM_MACFA (Q95KI3) Endothelial cell-selective adhesion molecule...	31	1.4
22	PO121_RAT (P52591) Nuclear envelope pore membrane protein POM 12...	31	1.8
23	ENAH_HUMAN (Q8N8S7) Protein enabled homolog	31	1.8
24	RFA1_HUMAN (P27694) Replication protein A 70 kDa DNA-binding sub...	31	1.8
25	TMG4_HUMAN (Q9BZD6) Transmembrane gamma-carboxyglutamic acid pro...	31	1.8
26	GLH4_CAEEL (O76743) ATP-dependent RNA helicase glh-4 (EC 3.6.1.-...	31	1.8
27	FGD1_HUMAN (P98174) FYVE, RhoGEF and PH domain-containing protei...	31	1.8
28	GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H...	30	2.3
29	NUP42_YEAST (P49686) Nucleoporin NUP42 (Nuclear pore protein NUP42)	30	2.3
30	TFE2_RAT (P21677) Transcription factor E2-alpha (Immunoglobulin ...	30	2.3
31	UBQL2_MOUSE (Q9QZM0) Ubiquilin-2 (Protein linking IAP with cytos...	30	3.1
32	FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncog...	30	3.1
33	BAT3_HUMAN (P46379) Large proline-rich protein BAT3 (HLA-B-assoc...	30	3.1
34	YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein P...	30	3.1
35	UBAP1_RAT (Q5XIS7) Ubiquitin-associated protein 1 (UBAP)	30	3.1
36	RGA7_SCHPO (O94466) Probable Rho-GTPase-activating protein 7	30	4.0
37	GDB3_WHEAT (P04730) Gamma-gliadin (Gliadin B-III) (Fragment)	30	4.0
38	YAE6_SCHPO (Q09847) Hypothetical protein C23D3.06c in chromosome I	30	4.0
39	YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I	29	5.2
40	SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)	29	5.2
41	PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM ...	29	5.2
42	ZDHC8_MOUSE (Q5Y5T5) Probable palmitoyltransferase ZDHHC8 (EC 2....	29	5.2
43	TNFL6_PIG (Q9BEA8) Tumor necrosis factor ligand superfamily memb...	29	5.2
44	SMR1_MOUSE (Q61900) Submaxillary gland androgen-regulated protei...	29	5.2
45	EP15R_MOUSE (Q60902) Epidermal growth factor receptor substrate ...	29	5.2
46	UBAP1_HUMAN (Q9NZ09) Ubiquitin-associated protein 1 (UBAP)	29	5.2
47	AMPH_CHICK (P50478) Amphiphysin	29	6.8
48	RFA1_PONPY (Q5R7Q4) Replication protein A 70 kDa DNA-binding sub...	29	6.8
49	TNFL6_HUMAN (P48023) Tumor necrosis factor ligand superfamily me...	29	6.8
50	ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline...	29	6.8
51	WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting ...	29	6.8
52	EP15R_HUMAN (Q9UBC2) Epidermal growth factor receptor substrate ...	29	6.8
53	FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)	28	8.9
54	STF1_HORSE (Q9GKL2) Steroidogenic factor 1 (STF-1) (SF-1)	28	8.9
55	SEC9_DEBHA (Q6BKU3) Protein transport protein SEC9	28	8.9
56	IE18_PRVKA (P33479) Immediate-early protein IE180	28	8.9
57	TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-d...	28	8.9
58	EP15_MOUSE (P42567) Epidermal growth factor receptor substrate 1...	28	8.9
59	ARGI_BACCD (P53608) Arginase (EC 3.5.3.1)	28	8.9
60	GFC1_HUMAN (P63117) HERV-F(c)1_Xq21.33 provirus ancestral Gag po...	28	8.9
61	YETS2_HUMAN (Q9ULM3) YEATS domain-containing protein 2	28	8.9
62	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	28	8.9

>SEC9_KLULA (Q6CSD1) Protein transport protein SEC9|
          Length = 556

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
 Frame = +2

Query: 176 NPLGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXFGA 355
           +P G S +SP+G  S +P+ T  G+  P   NNNP+                     +G+
Sbjct: 118 SPYGNSDSSPYGNASASPYDT--GYNAPLQQNNNPYG----------SMNNSYSNKSYGS 165

Query: 356 TS----TFGQPSAPAFGATSTGAFGQQ 424
            S    T+  PS  A  + + GA GQ+
Sbjct: 166 NSYSGDTYASPSPQASSSNNNGATGQR 192

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>NU100_YEAST (Q02629) Nucleoporin NUP100/NSP100 (Nuclear pore protein|
           NUP100/NSP100)
          Length = 959

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 17/106 (16%)
 Frame = +2

Query: 161 MFGA-NNPLGQSSASPFGQTSTNPFGT--QQG--FGQPSTTNNNPFAPKPFXXXXXXXXX 325
           +FGA NN    ++ S FG   ++ FGT  QQG  FGQ S   NN F  +           
Sbjct: 188 IFGAGNNSQSNTTGSLFGNQQSSAFGTNNQQGSLFGQQSQNTNNAFGNQNQLGGSSFGSK 247

Query: 326 XXXXXXXFGATST------------FGQPSAPAFGATSTGAFGQQS 427
                  FG ++             FGQ ++   G++++G FGQ S
Sbjct: 248 PVGSGSLFGQSNNTLGNTTNNRNGLFGQMNSSNQGSSNSGLFGQNS 293



 Score = 31.6 bits (70), Expect = 1.0
 Identities = 30/96 (31%), Positives = 37/96 (38%), Gaps = 9/96 (9%)
 Frame = +2

Query: 161 MFGANNPLGQSSASPFGQTSTNPFGTQQG------FGQPSTTNNNPFAPKPFXXXXXXXX 322
           MFG N P+   S   FG ++T+ FG QQ       FG  +  NN+               
Sbjct: 1   MFGNNRPMFGGSNLSFG-SNTSSFGGQQSQQPNSLFGNSNNNNNS--------------T 45

Query: 323 XXXXXXXXFGATSTFGQPSAPAFGATST---GAFGQ 421
                    G TS  G  S   FG  +T   GAFGQ
Sbjct: 46  SNNAQSGFGGFTSAAGSNSNSLFGNNNTQNNGAFGQ 81

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>NUP98_RAT (P49793) Nuclear pore complex protein Nup98 (Nucleoporin Nup98) (98|
           kDa nucleoporin)
          Length = 937

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 38/125 (30%), Positives = 43/125 (34%), Gaps = 35/125 (28%)
 Frame = +2

Query: 161 MFGANNPLGQSSAS-PFGQTSTNP-----FGTQQGFGQPSTTNNNPF----APKPFXXXX 310
           +FG  N    S  S PFGQ +T P     FG     GQPST     F    A +P     
Sbjct: 272 LFGQQNQQTTSLFSKPFGQATTTPNTGFSFGNTSTLGQPSTNTMGLFGVTQASQPGGLFG 331

Query: 311 XXXXXXXXXXXXFGATSTFGQP-------------------------SAPAFGATSTGAF 415
                        G T  FGQP                         SAP+FG TS G F
Sbjct: 332 TATNTSTGTAFGTG-TGLFGQPNTGFGAVGSTLFGNNKLTTFGTSTTSAPSFGTTSGGLF 390

Query: 416 GQQST 430
           G + T
Sbjct: 391 GNKPT 395

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>NU153_RAT (P49791) Nuclear pore complex protein Nup153 (Nucleoporin Nup153)|
            (153 kDa nucleoporin)
          Length = 1468

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 16/103 (15%)
 Frame = +2

Query: 161  MFG-ANNPLGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXX 337
            +FG A+NP+  S+     ++ST+        G+P+TT++   A  PF             
Sbjct: 1220 VFGQASNPVSSSAFGNSAESSTSQPLLFPQDGKPATTSSTASAAPPFVFGTGASSNSTVS 1279

Query: 338  XX-XFGATST---------FGQ----PSA-PAFGATSTGAFGQ 421
                FGAT+T         FG     PSA PAFGA  T  FGQ
Sbjct: 1280 SGFTFGATTTSSSSGSFFVFGTGHSAPSASPAFGANQTPTFGQ 1322

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>NU116_YEAST (Q02630) Nucleoporin NUP116/NSP116 (Nuclear pore protein|
           NUP116/NSP116)
          Length = 1113

 Score = 37.0 bits (84), Expect = 0.025
 Identities = 28/92 (30%), Positives = 34/92 (36%), Gaps = 2/92 (2%)
 Frame = +2

Query: 158 AMFGANNPLGQSSASPFGQTSTNPFGTQQG--FGQPSTTNNNPFAPKPFXXXXXXXXXXX 331
           ++FG NN   QS+   FGQ   N   +Q G  FGQ +  NN PF                
Sbjct: 468 SIFGQNNQQQQSTGGLFGQ-QNNQSQSQPGGLFGQTNQNNNQPFGQNGLQQPQQNNSLFG 526

Query: 332 XXXXXFGATSTFGQPSAPAFGATSTGAFGQQS 427
                FG TS F   +       S     QQS
Sbjct: 527 AKPTGFGNTSLFSNSTTNQSNGISGNNLQQQS 558



 Score = 31.6 bits (70), Expect = 1.0
 Identities = 29/93 (31%), Positives = 35/93 (37%), Gaps = 4/93 (4%)
 Frame = +2

Query: 164 FGANNPLGQSSASPFGQTSTNPFGTQQGFG----QPSTTNNNPFAPKPFXXXXXXXXXXX 331
           FGAN P   +S   FG T+ NP       G    Q S TN   F  +             
Sbjct: 249 FGANKPA--TSGGLFGNTTNNPTNGTNNTGLFGQQNSNTNGGLFGQQQ------------ 294

Query: 332 XXXXXFGATSTFGQPSAPAFGATSTGAFGQQST 430
                FGA +     +  AFG  + GAF QQ T
Sbjct: 295 ---NSFGANNV---SNGGAFGQVNRGAFPQQQT 321

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>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
            (214 kDa nucleoporin) (CAN protein)
          Length = 2090

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
 Frame = +2

Query: 158  AMFGANNPLGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXX 337
            ++FGA +    SS+  FGQ+S N  G    FGQ   +N   F   P              
Sbjct: 1770 SVFGAASSTSSSSSFSFGQSSPNTGGGL--FGQ---SNAPAFGQSPGFGQGGSVFGGTSA 1824

Query: 338  XXXFGATSTFGQPSAPAFGATSTGA-FGQQST 430
                 ATS F    A  FG+++TG+ FGQ ++
Sbjct: 1825 ATTTAATSGFSFCQASGFGSSNTGSVFGQAAS 1856



 Score = 29.6 bits (65), Expect = 4.0
 Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
 Frame = +2

Query: 191  SSASPFGQTSTNPFGTQQGF-----GQPS--TTNNNPFAPKPFXXXXXXXXXXXXXXXXF 349
            SS S FG  +T   G   GF     G+PS    N NPF+                    F
Sbjct: 1869 SSGSVFGSGNTGRGG---GFFSGLGGKPSQDAANKNPFS---------------SASGGF 1910

Query: 350  GATST------FGQPSAPAFGATSTGAFGQQ 424
            G+T+T      FG   A  FG  ++ +FG+Q
Sbjct: 1911 GSTATSNTSNLFGNSGAKTFGGFASSSFGEQ 1941



 Score = 29.3 bits (64), Expect = 5.2
 Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
 Frame = +2

Query: 179  PLGQSSASPFGQ----TSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXX 346
            P   SS+S F Q    T+T P  T   FGQ + +     AP  F                
Sbjct: 1648 PPAASSSSAFNQLTNNTATAPSATPV-FGQVAAST----APSLFGQQTGSTASTAAATPQ 1702

Query: 347  FGATSTFGQPSAPAFGATSTGAFGQ 421
              ++      S+PAFG T+ G FGQ
Sbjct: 1703 VSSSGF----SSPAFGTTAPGVFGQ 1723

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>YAUF_SCHPO (Q10168) Hypothetical protein C26A3.15c in chromosome I|
          Length = 598

 Score = 35.4 bits (80), Expect = 0.073
 Identities = 34/110 (30%), Positives = 44/110 (40%), Gaps = 21/110 (19%)
 Frame = +2

Query: 164 FGANNPLGQ--SSASPFGQTSTNPFGTQQGFGQPSTT--NNNPFAPKPFXXXXXXXXXXX 331
           F    P GQ  S+A+  G T+T+  GT   FG+P+TT   N P AP              
Sbjct: 270 FSFGKPAGQAASTATDKGTTTTSSAGTGFSFGKPATTEDTNKPTAPNSAFTKPATSTGDN 329

Query: 332 XXXXXFGATS----------TFGQP----SAPAFGATSTG---AFGQQST 430
                FG TS          T   P    + PA GA  T    +FG+ +T
Sbjct: 330 KPTFSFGNTSKPTENTSTTATSAPPLSNNTKPAEGANQTSSGFSFGKPAT 379



 Score = 30.0 bits (66), Expect = 3.1
 Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
 Frame = +2

Query: 167 GANNPLGQSS----ASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXX 334
           G+ N  G  S    +S  G  +TNP G+   FG   ++NN+    KP             
Sbjct: 112 GSANSTGDKSKNTASSATGAATTNPSGSTFNFG---SSNNSFNFGKPASTTNTTTPAAAS 168

Query: 335 XXXXFGATSTFGQPS-APAFGATST 406
               FG  +  G  S AP   +TST
Sbjct: 169 TGSLFGKPAATGTTSNAPPASSTST 193

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>BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-associated|
           transcript 3)
          Length = 1154

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 222 PTPSGPNRALASPAPPTTIPSHPNPS 299
           P P+GP  A  +PAP T  P+HP+P+
Sbjct: 250 PAPAGPAPAGPAPAPETNAPNHPSPA 275

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>NUP98_HUMAN (P52948) Nuclear pore complex protein Nup98-Nup96 precursor|
           [Contains: Nuclear pore complex protein Nup98
           (Nucleoporin Nup98) (98 kDa nucleoporin); Nuclear pore
           complex protein Nup96 (Nucleoporin Nup96) (96 kDa
           nucleoporin)]
          Length = 1729

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 28/72 (38%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
 Frame = +2

Query: 185 GQSSASPFGQTSTNPFGTQQG--FGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXFGAT 358
           GQ+  + FG TST  FGT  G  FGQ +    + F+ KPF                FG T
Sbjct: 253 GQNKTA-FG-TSTTGFGTNPGGLFGQQNQQTTSLFS-KPFGQATTTQNTGFS----FGNT 305

Query: 359 STFGQPSAPAFG 394
           ST GQPS    G
Sbjct: 306 STIGQPSTNTMG 317



 Score = 33.5 bits (75), Expect = 0.28
 Identities = 37/124 (29%), Positives = 43/124 (34%), Gaps = 34/124 (27%)
 Frame = +2

Query: 161 MFGANNPLGQSSAS-PFGQTSTNP-----FGTQQGFGQPSTTNNNPF----APKP----- 295
           +FG  N    S  S PFGQ +T       FG     GQPST     F    A +P     
Sbjct: 273 LFGQQNQQTTSLFSKPFGQATTTQNTGFSFGNTSTIGQPSTNTMGLFGVTQASQPGGLFG 332

Query: 296 FXXXXXXXXXXXXXXXXFGATST-----------------FGQP--SAPAFGATSTGAFG 418
                            FG T+T                 FG    SAP+FG TS G FG
Sbjct: 333 TATNTSTGTAFGTGTGLFGQTNTGFGAVGSTLFGNNKLTTFGSSTTSAPSFGTTSGGLFG 392

Query: 419 QQST 430
            + T
Sbjct: 393 NKPT 396

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>ESAM_HUMAN (Q96AP7) Endothelial cell-selective adhesion molecule precursor|
          Length = 390

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = +3

Query: 192 HLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 296
           H P   G   PTPS  ++AL SP  PTT  +HP P
Sbjct: 323 HGPPRPGALTPTPSLSSQALPSPRLPTTDGAHPQP 357

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>NU214_DROME (Q9W1X4) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
            (214 kDa nucleoporin) (DNup214)
          Length = 1711

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 27/103 (26%), Positives = 37/103 (35%), Gaps = 10/103 (9%)
 Frame = +2

Query: 152  QPAMFGANNPLGQSSASPFGQTSTN-PFG---------TQQGFGQPSTTNNNPFAPKPFX 301
            +P++FG     G S  S FG  S + PFG         TQ   G P+  + + F  K F 
Sbjct: 1454 KPSVFGQPAQAGDSGGSIFGGGSASTPFGSSSIFGGGNTQGAVGAPAAGSTSIFGQKVFG 1513

Query: 302  XXXXXXXXXXXXXXXFGATSTFGQPSAPAFGATSTGAFGQQST 430
                              ++  G P A  FG      FG  +T
Sbjct: 1514 QSSAAAPAAGGNIF----SNPVGSPQASPFGGGGNSIFGSPAT 1552



 Score = 30.8 bits (68), Expect = 1.8
 Identities = 24/93 (25%), Positives = 32/93 (34%), Gaps = 11/93 (11%)
 Frame = +2

Query: 173  NNPLGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXFG 352
            +NP+G   ASPFG    + FG+      P  +  + F                     FG
Sbjct: 1528 SNPVGSPQASPFGGGGNSIFGSPA--TAPPASGGSIFGGGSSSGGFGSFTQTTPAQGGFG 1585

Query: 353  -----------ATSTFGQPSAPAFGATSTGAFG 418
                       A + FG P AP    T+ G FG
Sbjct: 1586 GGFGQGGGGSVAQTGFGSPQAPQQQTTTPGGFG 1618

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>BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associated|
           transcript 3)
          Length = 1096

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +3

Query: 228 PSGPNRALASPAPPTTIPSHPNPS 299
           PSGP  A  +PAP T  P+HP+P+
Sbjct: 246 PSGPAPAGPAPAPETNAPNHPSPA 269

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>NU153_HUMAN (P49790) Nuclear pore complex protein Nup153 (Nucleoporin Nup153)|
            (153 kDa nucleoporin)
          Length = 1475

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 36/106 (33%), Positives = 46/106 (43%), Gaps = 19/106 (17%)
 Frame = +2

Query: 161  MFG-ANNPLGQSSASPFGQTSTNPFGTQQGFGQPS---TTNNNPFAPKPFXXX-XXXXXX 325
            +FG ++NP+   S+S FG T+ +       F Q S   TT++   A  PF          
Sbjct: 1227 VFGQSSNPV---SSSAFGNTAESSTSQSLLFSQDSKLATTSSTGTAVTPFVFGPGASSNN 1283

Query: 326  XXXXXXXFGATST---------FGQ----PSA-PAFGATSTGAFGQ 421
                   FGAT+T         FG     PSA PAFGA  T  FGQ
Sbjct: 1284 TTTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPAFGANQTPTFGQ 1329

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>NU189_SCHPO (Q9UTK4) Nucleoporin nup189 (Nuclear pore protein nup189)|
          Length = 1778

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 31/92 (33%), Positives = 35/92 (38%), Gaps = 3/92 (3%)
 Frame = +2

Query: 164 FGANNPLG-QSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXX 340
           FGANN    + S   FG T+T P      FGQ    NN   APKP               
Sbjct: 437 FGANNNAATKPSGFGFGSTTTTPASGGFSFGQ--NANN---APKPAFGSTATTAPKPAGT 491

Query: 341 XXFGATSTFGQPSAPAFGATSTGA--FGQQST 430
             FG     G  +  A  AT TG   FG  +T
Sbjct: 492 GLFGGLGA-GANTNTATNATGTGGSLFGNANT 522



 Score = 31.6 bits (70), Expect = 1.0
 Identities = 29/93 (31%), Positives = 35/93 (37%), Gaps = 13/93 (13%)
 Frame = +2

Query: 164 FGANNPLGQSSASPFGQTSTNP----FGTQQ----GFGQPST-----TNNNPFAPKPFXX 304
           FG NN   Q +   FG  S  P    FG+Q     GFGQ +T     +N N      F  
Sbjct: 17  FGQNN---QQTGGLFGSNSNTPGNTLFGSQNTSTTGFGQNTTQPLFGSNTNGGL---FGN 70

Query: 305 XXXXXXXXXXXXXXFGATSTFGQPSAPAFGATS 403
                            T  FGQ + PAFG T+
Sbjct: 71  RNNTTTTGGTGFGMSSGTGMFGQSNTPAFGGTN 103

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>FGD1_MOUSE (P52734) FYVE, RhoGEF and PH domain-containing protein 1|
           (Faciogenital dysplasia 1 protein homolog) (Zinc finger
           FYVE domain-containing protein 3) (Rho/Rac guanine
           nucleotide exchange factor FGD1) (Rho/Rac GEF)
          Length = 960

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 219 QPTPSGPNRALASPAPPTTIPSHPNPS 299
           +P P GP R  + P PPT IP  P PS
Sbjct: 124 EPHPEGPQRLRSDPGPPTEIPG-PRPS 149

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>IF2_LEIXX (Q6AG49) Translation initiation factor IF-2|
          Length = 916

 Score = 32.0 bits (71), Expect = 0.80
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +2

Query: 164 FGANNPLGQSSASPFGQTSTNPFGTQQGFGQ-PSTTN-NNPFAPKP 295
           F +N  +GQ  ++P  +   NPF + QG GQ PS +N   P  P+P
Sbjct: 162 FASNQGMGQRPSAP--RPGNNPFSSSQGMGQRPSPSNIPRPAPPRP 205

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>LRP2_HHV1F (P17589) Latency-related protein 2|
          Length = 107

 Score = 32.0 bits (71), Expect = 0.80
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = +3

Query: 159 PCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSA 302
           P +    H  SH P L   R PTP+ P+ + A P P T  P+HP+  A
Sbjct: 6   PRTPTPTHPHSHAPPL--PRTPTPAHPH-SHAPPLPRTPTPTHPHSHA 50

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>NUPL1_DROME (Q9VDV3) Probable nucleoporin Nup58|
          Length = 546

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 25/85 (29%), Positives = 31/85 (36%), Gaps = 5/85 (5%)
 Frame = +2

Query: 173 NNPLGQSSASP----FGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXX 340
           NN +G ++A+     FG            FG  + T+   F   P               
Sbjct: 7   NNAIGGATAATGAFAFGARPATTTAPPPSFG--AATSTPTFGAAPATTSLFAAPAATPAF 64

Query: 341 XXFGATSTFGQP-SAPAFGATSTGA 412
               AT  FG P S P FGATST A
Sbjct: 65  GAPAATPAFGAPASTPGFGATSTAA 89

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>NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nup124)|
          Length = 1159

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 36/110 (32%), Positives = 42/110 (38%), Gaps = 16/110 (14%)
 Frame = +2

Query: 152  QPA-MFGANNPLGQSSASPFG-QTSTNPFGTQQGFGQPSTTNNNP------FAPKPFXXX 307
            QPA MFG + P   SSA  FG Q+ TNP       G  +T  NNP      F P      
Sbjct: 1007 QPASMFGTSTP-APSSAFAFGNQSGTNPAAPAGFGGITNTATNNPPSTGFTFTPSNAGST 1065

Query: 308  XXXXXXXXXXXXXFG----ATSTF----GQPSAPAFGATSTGAFGQQSTP 433
                          G    A+  F    G+PS PA    STG     +TP
Sbjct: 1066 AAPMFGAGNTPNPSGSINNASQAFAFGSGEPSNPASNPPSTGFSFGAATP 1115

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>LP61_EIMTE (P15714) Antigen LPMC-61 (Fragment)|
          Length = 255

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -1

Query: 428 WTAGQRRQLMWRQRPERMAGQRWR*RQKARWSLSAPQMQ 312
           W  GQR+QL   Q+ ++   Q  + +Q+ +W    PQMQ
Sbjct: 49  WPEGQRQQLWPEQQQQQWPEQHQQAQQQQQWPQQQPQMQ 87



 Score = 30.8 bits (68), Expect = 1.8
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -1

Query: 416 QRRQLMWRQRPERMAGQRWR*RQKARWSLSAPQMQ 312
           Q++Q  W ++PE+   Q+W  +Q+ +WS    Q Q
Sbjct: 147 QQQQQQWPEQPEQQQQQQWPEQQQQQWSDQNQQQQ 181

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>ESAM_MACFA (Q95KI3) Endothelial cell-selective adhesion molecule precursor|
          Length = 390

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +3

Query: 192 HLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 296
           H P   G   PTPS  ++AL SP  PTT  ++P P
Sbjct: 323 HGPPRPGALTPTPSLSSQALPSPRLPTTDGANPQP 357

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>PO121_RAT (P52591) Nuclear envelope pore membrane protein POM 121 (Pore|
            membrane protein of 121 kDa) (P145)
          Length = 1199

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
 Frame = +2

Query: 170  ANNPLGQ-SSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXX 346
            + N LG  S +SPF  +  +   ++  FG  ST      AP P                 
Sbjct: 1098 SQNTLGAPSQSSPFAFSVGSTPESKPVFGGTSTPTFGQSAPAPGVGTT------------ 1145

Query: 347  FGATSTFGQPSAPAFGATSTGAFG 418
             G++ +FG PS PA G    G FG
Sbjct: 1146 -GSSLSFGAPSTPAQGFVGVGPFG 1168

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>ENAH_HUMAN (Q8N8S7) Protein enabled homolog|
          Length = 591

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = +3

Query: 132 AAAATTINQPCSALTIHSGSHLPALLGRRQP--TPSGPNRALASPAPPTTIPSHPNPSAA 305
           AAA  ++  P +++   S +  P L    QP  TPS     L   APP   P  P P+ A
Sbjct: 267 AAAPASVETPLNSVLGDSSASEPGLQAASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQA 326

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>RFA1_HUMAN (P27694) Replication protein A 70 kDa DNA-binding subunit (RP-A)|
           (RF-A) (Replication factor-A protein 1) (Single-stranded
           DNA-binding protein) (p70)
          Length = 616

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 7/79 (8%)
 Frame = +2

Query: 194 SASPFGQTSTNPFGTQQGFGQPSTTNNNPFA-------PKPFXXXXXXXXXXXXXXXXFG 352
           SA   G    NP    +G GQP      P A       P+P                 +G
Sbjct: 104 SAEAVGVKIGNPVPYNEGLGQPQVAPPAPAASPAASSRPQP---QNGSSGMGSTVSKAYG 160

Query: 353 ATSTFGQPSAPAFGATSTG 409
           A+ TFG+ + P+   TS G
Sbjct: 161 ASKTFGKAAGPSLSHTSGG 179

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>TMG4_HUMAN (Q9BZD6) Transmembrane gamma-carboxyglutamic acid protein 4|
           precursor (Proline-rich Gla protein 4) (Proline-rich
           gamma-carboxyglutamic acid protein 4)
          Length = 226

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 150 INQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPT 272
           +  PCS+     G H P+++ RR      P  A  SP PP+
Sbjct: 146 LQHPCSSAVYERGRHTPSIIFRR------PEEAALSPLPPS 180

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>GLH4_CAEEL (O76743) ATP-dependent RNA helicase glh-4 (EC 3.6.1.-) (Germline|
           helicase 4)
          Length = 1156

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 29/99 (29%), Positives = 35/99 (35%), Gaps = 18/99 (18%)
 Frame = +2

Query: 176 NPLGQSSASPFGQTSTNPFG--TQQGFG--QPSTTNNNPFAPKPFXXXXXXXXXXXX--- 334
           N  G  S+S FG  S   FG  +  G G  +P  T ++ F  K                 
Sbjct: 328 NGFGGDSSSSFGSGSKAGFGGTSSSGIGGQKPGATESSGFPTKETSTSGGTFGSGFGGKP 387

Query: 335 XXXXFGATST-----------FGQPSAPAFGATSTGAFG 418
               FGA ST           FG  S P FG  S+  FG
Sbjct: 388 TSTGFGAPSTTDSSSGQQTAGFGGASKPGFGGDSSTGFG 426

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>FGD1_HUMAN (P98174) FYVE, RhoGEF and PH domain-containing protein 1|
           (Faciogenital dysplasia 1 protein) (Zinc finger FYVE
           domain-containing protein 3) (Rho/Rac guanine nucleotide
           exchange factor FGD1) (Rho/Rac GEF)
          Length = 961

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +3

Query: 219 QPTPSGPNRALASPAPPTTIPS-HPNP 296
           +P P GP R  + P PPT  PS  P+P
Sbjct: 124 EPHPEGPQRLRSDPGPPTETPSQRPSP 150

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>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor|
           (Hydroxyproline-rich glycoprotein 1)
          Length = 555

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 222 PTPSGPNRALASPAPPTTIPSHPNP 296
           P+P+ P+ A  SPAPP+  P  P P
Sbjct: 46  PSPAPPSPAPPSPAPPSPAPPSPGP 70



 Score = 30.0 bits (66), Expect = 3.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 198 PALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 296
           PA      P+P+ P+ A  SPAPP+  P  P P
Sbjct: 86  PAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAP 118



 Score = 30.0 bits (66), Expect = 3.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 198 PALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 296
           PA      P+P+ P+ A  SPAPP+  P  P P
Sbjct: 81  PAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAP 113



 Score = 29.6 bits (65), Expect = 4.0
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 222 PTPSGPNRALASPAPPTTIPSHPNP 296
           P+P+ P+ A  SPAPP+  P  P P
Sbjct: 79  PSPAPPSPAPPSPAPPSPAPPSPAP 103



 Score = 29.6 bits (65), Expect = 4.0
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 222 PTPSGPNRALASPAPPTTIPSHPNP 296
           P+P+ P+ A  SPAPP+  P  P P
Sbjct: 41  PSPAPPSPAPPSPAPPSPAPPSPAP 65



 Score = 29.6 bits (65), Expect = 4.0
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +3

Query: 135 AAATTINQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 296
           A   + N  C    I +    PA      P+P+ P+ A  SPAPP+  P  P P
Sbjct: 22  AFVASANAQCVPGGIFNCPPSPAPPSPAPPSPAPPSPAPPSPAPPSPGPPSPAP 75



 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +3

Query: 198 PALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSAA 305
           PA      P+P+ P+ A  SPAPP+  P  P PS A
Sbjct: 91  PAPPSPAPPSPAPPSPAPPSPAPPSPAPPSP-PSPA 125

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>NUP42_YEAST (P49686) Nucleoporin NUP42 (Nuclear pore protein NUP42)|
          Length = 430

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 28/91 (30%), Positives = 34/91 (37%), Gaps = 1/91 (1%)
 Frame = +2

Query: 164 FGANNP-LGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXX 340
           FG N    G +S S FG TS         FG P+  ++ P    P               
Sbjct: 65  FGTNTGNTGNTSISAFGNTSNA--AKPSAFGAPAFGSSAPINVNPPST------------ 110

Query: 341 XXFGATSTFGQPSAPAFGATSTGAFGQQSTP 433
                TS FG   AP+FG+T  GA    S P
Sbjct: 111 -----TSAFG---APSFGSTGFGAMAATSNP 133

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>TFE2_RAT (P21677) Transcription factor E2-alpha (Immunoglobulin|
           enhancer-binding factor E12/E47) (Transcription factor
           3) (TCF-3) (Transcription regulator Pan)
          Length = 649

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = +3

Query: 138 AATTINQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSAA 305
           A  T  +  S  T+     LP  LG   P P  P+   +S    T+ PS+P   AA
Sbjct: 108 AYATFGRDTSVGTLSQAGFLPGELGLSSPGPLSPSGVKSSSQYYTSFPSNPRRRAA 163

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>UBQL2_MOUSE (Q9QZM0) Ubiquilin-2 (Protein linking IAP with cytoskeleton 2)|
           (PLIC-2) (Ubiquitin-like product Chap1/Dsk2) (DSK2
           homolog) (Chap1)
          Length = 638

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 25/99 (25%), Positives = 36/99 (36%), Gaps = 5/99 (5%)
 Frame = +2

Query: 152 QPAMFGANNPLGQSSASPFGQTSTNPFGTQQGFGQPSTTNN-----NPFAPKPFXXXXXX 316
           +P +  A    G +  +  G +ST+  GT     QPS T N     NP+AP P       
Sbjct: 288 EPMLNAAQEQFGGNPFATVGSSSTSGEGT-----QPSRTENRDPLPNPWAPPPTTQTAAT 342

Query: 317 XXXXXXXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTP 433
                      G+ S+    +A    A +       STP
Sbjct: 343 TTTTTTTSSGSGSGSSSSSTTAGNTMAAANYVASIFSTP 381

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>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)|
           (Translocated in liposarcoma protein) (POMp75) (75 kDa
           DNA-pairing protein)
          Length = 526

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 22/88 (25%), Positives = 35/88 (39%)
 Frame = +2

Query: 170 ANNPLGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXF 349
           A+N   Q +   +G   T P    QG+ Q S+    P+  + +                 
Sbjct: 2   ASNDYTQQATQSYGAYPTQP---GQGYSQQSS---QPYGQQSYSGYSQSTD--------- 46

Query: 350 GATSTFGQPSAPAFGATSTGAFGQQSTP 433
             TS +GQ S  ++G +    +G QSTP
Sbjct: 47  --TSGYGQSSYSSYGQSQNTGYGTQSTP 72

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>BAT3_HUMAN (P46379) Large proline-rich protein BAT3 (HLA-B-associated|
           transcript 3) (Protein G3)
          Length = 1132

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 222 PTPSGPNRALASPAPPTTIPSHPNPS 299
           P P+GP     +PAP T  P+HP+P+
Sbjct: 254 PAPAGP-----TPAPETNAPNHPSPA 274

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>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c|
           precursor
          Length = 943

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 3/88 (3%)
 Frame = +2

Query: 173 NNPLGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPK---PFXXXXXXXXXXXXXXX 343
           + PL  S+ +P    +++ F T  G   P+++ + P +     P                
Sbjct: 606 STPLSNSTVAPTSTFTSSGFNTTSGL--PTSSVSTPLSNSSAYPSSGSSTFSRLSSTLTS 663

Query: 344 XFGATSTFGQPSAPAFGATSTGAFGQQS 427
               T TFG  S  A G   TG+  Q S
Sbjct: 664 SIIPTETFGSTSGSATGTRPTGSSSQGS 691

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>UBAP1_RAT (Q5XIS7) Ubiquitin-associated protein 1 (UBAP)|
          Length = 502

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +3

Query: 165 SALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPS 284
           SAL ++SG+ +PAL   + P+ S  +      +PP+T P+
Sbjct: 322 SALNLNSGTEVPALTSSQMPSLSILSVCTEESSPPSTCPT 361

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>RGA7_SCHPO (O94466) Probable Rho-GTPase-activating protein 7|
          Length = 695

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +3

Query: 135 AAATTINQPCSALTIHSGSHLPALLGRRQPTPSG-PNRALASPAPPTTIPSHPNPSAA 305
           ++A   N P +  TI   + +P+ L    P PS  PN ++ASPA P +  S+P+ + A
Sbjct: 344 SSAGKTNPPVNP-TIKVTAAIPSPLQNTNPAPSTFPNPSVASPAFPNSSTSNPSTAPA 400

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>GDB3_WHEAT (P04730) Gamma-gliadin (Gliadin B-III) (Fragment)|
          Length = 244

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = +3

Query: 189 SHLPALLGRRQPTPSGPNRA--LASPAPPTTIPSHPNPSAA 305
           S  P L   +QP+P  P +   + SPA PTTIPS   P++A
Sbjct: 17  SQQPFLQQPQQPSPQ-PQQVVQIISPATPTTIPSAGKPTSA 56

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>YAE6_SCHPO (Q09847) Hypothetical protein C23D3.06c in chromosome I|
          Length = 1325

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
 Frame = +2

Query: 152 QPAMFGANNPLGQSSASPFGQTSTNPFGTQQG---FGQPSTTNNNPFAPKPFXXXXXXXX 322
           Q + FG N   GQ+++   G ++    G +     FGQPST    P   +P         
Sbjct: 484 QSSAFG-NFKFGQATSFDKGLSTDASSGAKSNTPVFGQPSTFGQAPVFGQP--------- 533

Query: 323 XXXXXXXXFGATSTFGQPSAPAFGATS 403
                   FG    FGQPS  AFG +S
Sbjct: 534 ------SAFGQAPVFGQPS--AFGQSS 552

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>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I|
          Length = 1794

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 222  PTPSGPNRALASPAPPTTIPSHPNP 296
            P P+GP  A   P P ++ PS PNP
Sbjct: 1722 PMPAGPPSAPPPPLPASSAPSVPNP 1746

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>SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)|
          Length = 582

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = +3

Query: 222 PTPSGPNRALASPAPPTTIPS---HPNPSAA 305
           P P GP  A AS APPT  P     P P++A
Sbjct: 37  PPPPGPGAASASAAPPTASPGPERKPPPASA 67

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>PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 121 (Pore|
            membrane protein of 121 kDa)
          Length = 1200

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 27/101 (26%), Positives = 34/101 (33%), Gaps = 7/101 (6%)
 Frame = +2

Query: 152  QPAMFGANNPLGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPK---PFXXXXXXXX 322
            QP           S  S FG T T          QP+ T +N   P    PF        
Sbjct: 866  QPLASSTQTAASNSGFSGFGSTLTTSTSAPATTSQPTLTFSNTVTPTFNIPFSSSAKPAL 925

Query: 323  XX---XXXXXXFGATSTFGQPS-APAFGATSTGAFGQQSTP 433
                       FGAT    +P+ AP+FG++ T      S P
Sbjct: 926  PTYPGANSQPTFGATDGATKPALAPSFGSSFTFGNSVASAP 966



 Score = 28.9 bits (63), Expect = 6.8
 Identities = 30/92 (32%), Positives = 33/92 (35%), Gaps = 4/92 (4%)
 Frame = +2

Query: 164  FGANNPLGQSSAS---PFGQTSTNPFGTQQGFGQPS-TTNNNPFAPKPFXXXXXXXXXXX 331
            FG +   G SS S    FG   +   GT   FG  S  T   P    PF           
Sbjct: 1064 FGLSATPGTSSTSGTFSFGSGQSGTPGTTTSFGSLSQNTLGAPSQGSPFA---------- 1113

Query: 332  XXXXXFGATSTFGQPSAPAFGATSTGAFGQQS 427
                 F   ST    S P FG TST  FGQ +
Sbjct: 1114 -----FSVGST--PESKPVFGGTSTPTFGQSA 1138

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>ZDHC8_MOUSE (Q5Y5T5) Probable palmitoyltransferase ZDHHC8 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 8) (DHHC-8)
          Length = 762

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 23/93 (24%), Positives = 31/93 (33%)
 Frame = +2

Query: 155 PAMFGANNPLGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXX 334
           P   GA NP  Q+S S    + +    T     Q    NNN   P+P             
Sbjct: 611 PGFGGARNPALQTSLSSLSSSMSRAPRTSSSSLQADQANNNAPGPRP-------GSGSHR 663

Query: 335 XXXXFGATSTFGQPSAPAFGATSTGAFGQQSTP 433
                G  S  G P +P++  +   AF     P
Sbjct: 664 SPARQGLPSPPGTPRSPSYTGSKAVAFIHTDLP 696

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>TNFL6_PIG (Q9BEA8) Tumor necrosis factor ligand superfamily member 6 (Fas|
           antigen ligand) (Fas ligand) (CD178 antigen) (CD95L
           protein) [Contains: Tumor necrosis factor ligand
           superfamily member 6, membrane form; Tumor necrosis
           factor ligand superfamily m
          Length = 282

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +3

Query: 195 LPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 296
           +P   G+R+P P  P      P PPT +PS P P
Sbjct: 36  VPGRPGQRRPPPPPP----PPPPPPTLLPSRPLP 65

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>SMR1_MOUSE (Q61900) Submaxillary gland androgen-regulated protein 1 precursor|
           (Salivary protein MSG1)
          Length = 147

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = +3

Query: 207 LGRRQPTPSGPNRALASPAPP-TTIPSHPNP 296
           +GR  P P GP      P PP   +P HP P
Sbjct: 58  IGRPPPPPFGPGIGRPPPPPPCPPVPPHPRP 88

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>EP15R_MOUSE (Q60902) Epidermal growth factor receptor substrate 15-like 1|
           (Eps15-related protein) (Eps15R) (Epidermal growth
           factor receptor pathway substrate 15-related sequence)
           (Eps15-rs)
          Length = 907

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 10/51 (19%)
 Frame = +2

Query: 167 GANNPLGQSSAS----------PFGQTSTNPFGTQQGFGQPSTTNNNPFAP 289
           G + P+ Q  +S          P G  S  PF  ++GFG P  +  +PFAP
Sbjct: 792 GQSTPVSQLGSSDFPESPDPFQPLGADSGEPFQNKKGFGDP-FSGKDPFAP 841

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>UBAP1_HUMAN (Q9NZ09) Ubiquitin-associated protein 1 (UBAP)|
          Length = 502

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 165 SALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPS 299
           SAL + SG+ +PAL   + P+ S  +      +PP T P+   P+
Sbjct: 322 SALNLDSGTEMPALTSSQMPSLSVLSVCTEESSPPNTGPTVTPPN 366

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>AMPH_CHICK (P50478) Amphiphysin|
          Length = 682

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 222 PTPSGPNRALASPAPPTTIPSHPNPSAA 305
           P+ SGP R   +P+PP  +   P+P+A+
Sbjct: 249 PSDSGPLRIAKTPSPPEEVSPLPSPTAS 276

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>RFA1_PONPY (Q5R7Q4) Replication protein A 70 kDa DNA-binding subunit (RP-A)|
           (RF-A) (Replication factor-A protein 1) (p70)
          Length = 616

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 21/79 (26%), Positives = 28/79 (35%), Gaps = 7/79 (8%)
 Frame = +2

Query: 194 SASPFGQTSTNPFGTQQGFGQPSTTNNNPFA-------PKPFXXXXXXXXXXXXXXXXFG 352
           SA   G    NP    +G GQP      P A       P+P                 +G
Sbjct: 104 SAEVVGVKIGNPVPYNEGLGQPQVAPPAPAASPAASSRPQP---QNGTSGAGSTVSKAYG 160

Query: 353 ATSTFGQPSAPAFGATSTG 409
           A+ TFG+ + P+    S G
Sbjct: 161 ASKTFGKAAGPSLSHNSGG 179

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>TNFL6_HUMAN (P48023) Tumor necrosis factor ligand superfamily member 6 (Fas|
           antigen ligand) (Fas ligand) (CD178 antigen) (CD95L
           protein) (Apoptosis antigen ligand) (APTL) [Contains:
           Tumor necrosis factor ligand superfamily member 6,
           membrane form; Tumor
          Length = 281

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 195 LPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 296
           +P   G+R+P P  P   L  P PP  +P  P P
Sbjct: 36  VPRRPGQRRPPPPPPPPPLPPPPPPPPLPPLPLP 69

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>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein|
           1) (NDPP-1)
          Length = 802

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = +3

Query: 222 PTPSGPNRALASPAPPTTIPSHPNPS 299
           P PSGP  A A P PP   P  P PS
Sbjct: 550 PLPSGPAYASALPPPPGPPPPPPLPS 575

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>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 487

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = +3

Query: 198 PALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 296
           P     + P PS P     S APP   PS P P
Sbjct: 272 PPSQNSKPPVPSTPRPGAGSQAPPPPPPSRPGP 304

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>EP15R_HUMAN (Q9UBC2) Epidermal growth factor receptor substrate 15-like 1|
           (Eps15-related protein) (Eps15R)
          Length = 864

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 170 ANNPLGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAP 289
           A+ P       P G  S +PF +++GFG P  +  +PF P
Sbjct: 805 ADFPEAPDPFQPLGADSGDPFQSKKGFGDP-FSGKDPFVP 843

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>FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)|
          Length = 518

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 23/94 (24%), Positives = 32/94 (34%), Gaps = 3/94 (3%)
 Frame = +2

Query: 152 QPAMFGANNPLGQSS-ASPFGQTSTNPFGTQQGFG--QPSTTNNNPFAPKPFXXXXXXXX 322
           QPA    +   G SS +S +GQ  +  +G Q G+G  Q S          P         
Sbjct: 104 QPAPSSTSGSYGGSSQSSSYGQPQSGGYGQQSGYGGQQQSYGQQQSSYNPPQGYGQQNQY 163

Query: 323 XXXXXXXXFGATSTFGQPSAPAFGATSTGAFGQQ 424
                    G    +GQ  +   G    G +G Q
Sbjct: 164 NSSSGGGGGGGGGNYGQDQSSMSGGGGGGGYGNQ 197

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>STF1_HORSE (Q9GKL2) Steroidogenic factor 1 (STF-1) (SF-1)|
          Length = 461

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 186 GSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSA 302
           G H+P   G     P+GP     +PA P  +PS   P A
Sbjct: 143 GLHVPEPKGLASGPPAGPLGDFGAPALPMAVPSTNGPLA 181

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>SEC9_DEBHA (Q6BKU3) Protein transport protein SEC9|
          Length = 490

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
 Frame = +2

Query: 170 ANNPLGQSS--ASPFGQ------TSTNPFGTQQGFGQPSTTNNNPF 283
           ANNP G  +  AS  G+      T TNP+G  +  G+ S +  NP+
Sbjct: 111 ANNPYGNGNVGASSRGERAGGRNTQTNPYGGARASGRASGSKPNPY 156

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>IE18_PRVKA (P33479) Immediate-early protein IE180|
          Length = 1446

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +3

Query: 201 ALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSAA 305
           AL       P GP R+  S A P +    P PSAA
Sbjct: 152 ALAAAEAGAPGGPGRSSPSAASPASSSGSPGPSAA 186

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>TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-derived tau|
           kinase)
          Length = 1321

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +3

Query: 147 TINQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHP 290
           T   P      HS  H      RR+  P+GP R + S APP  +   P
Sbjct: 629 TSQPPTPGSPSHSPLHSGPRPRRRESDPTGPQRQVFSVAPPFEVNGLP 676

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>EP15_MOUSE (P42567) Epidermal growth factor receptor substrate 15 (Protein|
           Eps15) (AF-1p protein)
          Length = 897

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = +2

Query: 188 QSSASPFGQTSTNPFGTQQGFGQPST---TNNNPFAP 289
           Q+S  PF  +ST+PF         S     +N+PFAP
Sbjct: 661 QTSTDPFTTSSTDPFSASSNSSNTSVETWKHNDPFAP 697

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>ARGI_BACCD (P53608) Arginase (EC 3.5.3.1)|
          Length = 299

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +2

Query: 164 FGANNPLGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPK 292
           + A+  +  +  SP G     P     GFG P+ T    ++PK
Sbjct: 121 YDAHGDVNTAETSPSGNIHGMPLAASLGFGHPALTQIGGYSPK 163

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>GFC1_HUMAN (P63117) HERV-F(c)1_Xq21.33 provirus ancestral Gag polyprotein (Gag|
           polyprotein) [Contains: Matrix protein; Capsid protein]
          Length = 469

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 20/55 (36%), Positives = 27/55 (49%)
 Frame = +3

Query: 141 ATTINQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSAA 305
           ++ +++P  AL +     LPA L    P  SGP    A P PPT   S  NP A+
Sbjct: 118 SSPLSEPPEALALPP---LPAALPPPYPGSSGPTPT-APPLPPTPPSSPANPPAS 168

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>YETS2_HUMAN (Q9ULM3) YEATS domain-containing protein 2|
          Length = 1422

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = +3

Query: 183  SGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPS 299
            S S  PA+L    PTP  P+ A A+ A   T P  P PS
Sbjct: 1081 STSKPPAILPVAAPTPVVPSSAPAAVAKVKTEPETPGPS 1119

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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
 Frame = +3

Query: 183 SGSHLPALLGRRQPTPSG--PNRALASPAPPTTIPSHPNPS 299
           S  HLP  +G   P      P+R    P  P   PSHP PS
Sbjct: 81  SHGHLPPSVGGPPPHRGHLPPSRGFNPPPSPVISPSHPPPS 121


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,372,141
Number of Sequences: 219361
Number of extensions: 948043
Number of successful extensions: 5232
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 4248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5138
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result