Clone Name | bastl47g10 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_478067.1| Oryza sativa (japonica cultivar-group), mRNA Length = 408 Score = 54.0 bits (27), Expect = 6e-05 Identities = 36/39 (92%) Strand = Plus / Plus Query: 43 gagggtggcggtggttggcggcggggtgagcgggctggc 81 ||||||||| ||||| |||| |||||||||||||||||| Sbjct: 205 gagggtggcagtggtgggcgccggggtgagcgggctggc 243
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 6e-05 Identities = 36/39 (92%) Strand = Plus / Plus Query: 43 gagggtggcggtggttggcggcggggtgagcgggctggc 81 ||||||||| ||||| |||| |||||||||||||||||| Sbjct: 17044547 gagggtggcagtggtgggcgccggggtgagcgggctggc 17044585
>dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0016H06 Length = 148158 Score = 54.0 bits (27), Expect = 6e-05 Identities = 36/39 (92%) Strand = Plus / Plus Query: 43 gagggtggcggtggttggcggcggggtgagcgggctggc 81 ||||||||| ||||| |||| |||||||||||||||||| Sbjct: 123958 gagggtggcagtggtgggcgccggggtgagcgggctggc 123996
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 52.0 bits (26), Expect = 2e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 41 atgagggtggcggtggttggcggcggggtgagcgggctggcg 82 ||||||||||||||||| |||| ||| || |||||||||||| Sbjct: 9528051 atgagggtggcggtggtgggcgccggagtaagcgggctggcg 9528092
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 52.0 bits (26), Expect = 2e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 41 atgagggtggcggtggttggcggcggggtgagcgggctggcg 82 ||||||||||||||||| |||| ||| || |||||||||||| Sbjct: 9527936 atgagggtggcggtggtgggcgccggagtaagcgggctggcg 9527977
>emb|AL731874.4|CNS08C8E Oryza sativa chromosome 12, . BAC OSJNBb0077C18 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 123766 Score = 52.0 bits (26), Expect = 2e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 41 atgagggtggcggtggttggcggcggggtgagcgggctggcg 82 ||||||||||||||||| |||| ||| || |||||||||||| Sbjct: 113275 atgagggtggcggtggtgggcgccggagtaagcgggctggcg 113316
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 46.1 bits (23), Expect = 0.014 Identities = 29/31 (93%) Strand = Plus / Plus Query: 52 ggtggttggcggcggggtgagcgggctggcg 82 |||||| ||||||||| |||||||||||||| Sbjct: 1569222 ggtggtgggcggcgggctgagcgggctggcg 1569252
>emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; segment 2/2 Length = 178073 Score = 46.1 bits (23), Expect = 0.014 Identities = 23/23 (100%) Strand = Plus / Minus Query: 59 ggcggcggggtgagcgggctggc 81 ||||||||||||||||||||||| Sbjct: 132031 ggcggcggggtgagcgggctggc 132009
>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2 Length = 178000 Score = 46.1 bits (23), Expect = 0.014 Identities = 23/23 (100%) Strand = Plus / Plus Query: 59 ggcggcggggtgagcgggctggc 81 ||||||||||||||||||||||| Sbjct: 46043 ggcggcggggtgagcgggctggc 46065
>dbj|AB012703.1| Daucus carota mRNA for 181, partial cds Length = 1513 Score = 44.1 bits (22), Expect = 0.055 Identities = 28/30 (93%) Strand = Plus / Minus Query: 46 ggtggcggtggttggcggcggggtgagcgg 75 |||||||||||||| ||||||| ||||||| Sbjct: 62 ggtggcggtggttgtcggcgggatgagcgg 33
>gb|AC125360.4| Mus musculus BAC clone RP23-58E21 from 12, complete sequence Length = 170040 Score = 42.1 bits (21), Expect = 0.22 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 agagagcagagagcagagcggagca 25 ||||||||||||||||||| ||||| Sbjct: 109652 agagagcagagagcagagcagagca 109676 Score = 42.1 bits (21), Expect = 0.22 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 agagagcagagagcagagcggagca 25 ||||||||||||||||||| ||||| Sbjct: 109611 agagagcagagagcagagcagagca 109635 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 109832 agagcagagagcagagcagagca 109854 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 agagagcagagagcagagc 19 ||||||||||||||||||| Sbjct: 109818 agagagcagagagcagagc 109836 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 agagagcagagagcagagc 19 ||||||||||||||||||| Sbjct: 109761 agagagcagagagcagagc 109779 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 109729 agagcagagagcagagcagagca 109751 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 agagagcagagagcagagc 19 ||||||||||||||||||| Sbjct: 109592 agagagcagagagcagagc 109610 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 109570 agagcagagagcagagcagagca 109592 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 109553 agagcagagagcagagcagagca 109575 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 109471 agagcagagagcagagcagagca 109493 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 109353 agagcagagagcagagcagagca 109375 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 109336 agagcagagagcagagcagagca 109358 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 109271 agagcagagagcagagcagagca 109293 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 agagagcagagagcagagc 19 ||||||||||||||||||| Sbjct: 109235 agagagcagagagcagagc 109253
>gb|AC122291.4| Mus musculus BAC clone RP23-255N20 from 15, complete sequence Length = 184378 Score = 42.1 bits (21), Expect = 0.22 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 agagagcagagagcagagcggagca 25 ||||||||||||||||||| ||||| Sbjct: 130376 agagagcagagagcagagcagagca 130400 Score = 42.1 bits (21), Expect = 0.22 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 agagagcagagagcagagcggagca 25 ||||||||||||||||||| ||||| Sbjct: 130306 agagagcagagagcagagcagagca 130330 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 130279 agagcagagagcagagcagagca 130301 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 130206 agagcagagagcagagcagagca 130228 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 130163 agagcagagagcagagcagagca 130185 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 130100 agagcagagagcagagcagagca 130122
>gb|AC139029.10| Mus musculus chromosome 14, clone RP23-393A18, complete sequence Length = 204943 Score = 42.1 bits (21), Expect = 0.22 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 agagagcagagagcagagcggagca 25 ||||||||||||||||||| ||||| Sbjct: 167258 agagagcagagagcagagcagagca 167234 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 167239 agagcagagagcagagcagagca 167217 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 agagagcagagagcagagc 19 ||||||||||||||||||| Sbjct: 167164 agagagcagagagcagagc 167146 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 167119 agagcagagagcagagcagagca 167097
>emb|AL645802.11| Mouse DNA sequence from clone RP23-128D9 on chromosome 11 Contains the gene for olfactory receptor MOR275-2, an olfactory receptor (MOR275-3) pseudogene, the gene for olfactory receptor MOR275-5, a novel gene (2210407C18Rik), the gene olfactory receptor MOR107-1, a novel gene (LOC216781), a novel olfactory receptor protein, a novel gene similar to olfactory receptor MOR285-1 (LOC216783), a novel gene similar to olfactory receptor MOR285-2 (LOC216784), a novel gene similar to olfactory receptor MOR285-1 (LOC194664), the gene for olfactory receptor MOR256-47 and a novel gene similar to olfactory receptor MOR285-1 (LOC193147), complete sequence Length = 226520 Score = 42.1 bits (21), Expect = 0.22 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 agagagcagagagcagagcggagca 25 ||||||||||||||||||| ||||| Sbjct: 64954 agagagcagagagcagagcagagca 64978 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 agagagcagagagcagagc 19 ||||||||||||||||||| Sbjct: 64781 agagagcagagagcagagc 64799
>dbj|AK038810.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230065C20 product:unclassifiable, full insert sequence Length = 1987 Score = 42.1 bits (21), Expect = 0.22 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 agagagcagagagcagagcggagca 25 ||||||||||||||||||| ||||| Sbjct: 594 agagagcagagagcagagcagagca 570 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 575 agagcagagagcagagcagagca 553 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 agagagcagagagcagagc 19 ||||||||||||||||||| Sbjct: 500 agagagcagagagcagagc 482 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 455 agagcagagagcagagcagagca 433
>emb|CT025556.12| Mouse DNA sequence from clone RP24-91G8 on chromosome 13, complete sequence Length = 225239 Score = 42.1 bits (21), Expect = 0.22 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 agagagcagagagcagagcggagca 25 ||||||||||||||||||| ||||| Sbjct: 85657 agagagcagagagcagagcagagca 85633 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 209498 agagcagagagcagagcagagca 209520 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 209481 agagcagagagcagagcagagca 209503
>gb|AC133954.3| Mus musculus BAC clone RP23-154C17 from chromosome 5, complete sequence Length = 199991 Score = 40.1 bits (20), Expect = 0.86 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 agagagcagagagcagagcg 20 |||||||||||||||||||| Sbjct: 149575 agagagcagagagcagagcg 149594
>ref|XM_850251.1| PREDICTED: Canis familiaris similar to PTK6 protein tyrosine kinase 6 (LOC612522), mRNA Length = 2265 Score = 40.1 bits (20), Expect = 0.86 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gcggggtgagcgggctggcg 82 |||||||||||||||||||| Sbjct: 720 gcggggtgagcgggctggcg 739
>gb|BT009331.1| Triticum aestivum clone wlm24.pk0027.a6:fis, full insert mRNA sequence Length = 1634 Score = 40.1 bits (20), Expect = 0.86 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 gcagagagcagagcggagca 25 |||||||||||||||||||| Sbjct: 21 gcagagagcagagcggagca 2
>gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184334 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 123255 agggtggcggtgtttggcggcggg 123278
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 0.86 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ggtggcggtggttggcggcg 65 |||||||||||||||||||| Sbjct: 2129671 ggtggcggtggttggcggcg 2129690
>ref|NM_078543.2| Drosophila melanogaster Downstream of raf1 CG15793-RA (Dsor1), mRNA Length = 1344 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 873 agggtggcggtgtttggcggcggg 850
>ref|XM_693189.1| PREDICTED: Danio rerio similar to C61 protein (LOC569780), mRNA Length = 2001 Score = 40.1 bits (20), Expect = 0.86 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 agagagcagagagcagagcg 20 |||||||||||||||||||| Sbjct: 1696 agagagcagagagcagagcg 1677
>gb|AY058692.1| Drosophila melanogaster LD41207 full length cDNA Length = 1365 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 873 agggtggcggtgtttggcggcggg 850
>gb|AY135093.1| Drosophila melanogaster strain 5-17-88b#1 Makindu Kenyan MAPKK signal transduction kinase (Dsor1) gene, complete cds Length = 1825 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 1430 agggtggcggtgtttggcggcggg 1407
>gb|AY135092.1| Drosophila melanogaster strain 7-21-88b#1 Kakamega Kenyan MAPKK signal transduction kinase (Dsor1) gene, complete cds Length = 1825 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 1430 agggtggcggtgtttggcggcggg 1407
>gb|AY135091.1| Drosophila melanogaster strain 5-17-88a#6 Hunter's Lodge Kenyan MAPKK signal transduction kinase (Dsor1) gene, complete cds Length = 1825 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 1430 agggtggcggtgtttggcggcggg 1407
>gb|AY135090.1| Drosophila melanogaster strain 5-17-88a#4 Hunter's Lodge Kenyan MAPKK signal transduction kinase (Dsor1) gene, complete cds Length = 1823 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 1428 agggtggcggtgtttggcggcggg 1405
>gb|AY135089.1| Drosophila melanogaster strain 5-17-88b#5 Makindu Kenyan MAPKK signal transduction kinase (Dsor1) gene, complete cds Length = 1825 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 1430 agggtggcggtgtttggcggcggg 1407
>gb|AY135088.1| Drosophila melanogaster strain 7-21-88b#4 Kakamega Kenyan MAPKK signal transduction kinase (Dsor1) gene, complete cds Length = 1825 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 1430 agggtggcggtgtttggcggcggg 1407
>gb|AY135087.1| Drosophila melanogaster strain 7-21-88b#2 Kakamega Kenyan MAPKK signal transduction kinase (Dsor1) gene, complete cds Length = 1825 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 1430 agggtggcggtgtttggcggcggg 1407
>gb|AY135086.1| Drosophila melanogaster strain CA2 Cape Town Kenyan MAPKK signal transduction kinase (Dsor1) gene, complete cds Length = 1825 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 1430 agggtggcggtgtttggcggcggg 1407
>gb|AY135085.1| Drosophila melanogaster strain 5-17-88#b1 Makindu Kenyan MAPKK signal transduction kinase (Dsor1) gene, complete cds Length = 1825 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 1430 agggtggcggtgtttggcggcggg 1407
>gb|AY135084.1| Drosophila melanogaster strain 7-21-88#b2 Kakamega Kenyan MAPKK signal transduction kinase (Dsor1) gene, complete cds Length = 1825 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 1430 agggtggcggtgtttggcggcggg 1407
>gb|AY135083.1| Drosophila melanogaster strain Wild5b Georgia, USA MAPKK signal transduction kinase (Dsor1) gene, complete cds Length = 1825 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 1430 agggtggcggtgtttggcggcggg 1407
>gb|AY135082.1| Drosophila melanogaster strain Reids2 Madiera Portugese MAPKK signal transduction kinase (Dsor1) gene, complete cds Length = 1825 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 1430 agggtggcggtgtttggcggcggg 1407
>gb|AY135081.1| Drosophila melanogaster strain PYR2 Pyrenees Spanish MAPKK signal transduction kinase (Dsor1) gene, complete cds Length = 1825 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 1430 agggtggcggtgtttggcggcggg 1407
>gb|AY135080.1| Drosophila melanogaster strain M2 Australian MAPKK signal transduction kinase (Dsor1) gene, complete cds Length = 1825 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 1430 agggtggcggtgtttggcggcggg 1407
>gb|AY135079.1| Drosophila melanogaster strain 20 MAPKK signal transduction kinase (Dsor1) gene, complete cds Length = 1825 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 1430 agggtggcggtgtttggcggcggg 1407
>gb|AY135078.1| Drosophila melanogaster strain 18 MAPKK signal transduction kinase (Dsor1) gene, complete cds Length = 1825 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 1430 agggtggcggtgtttggcggcggg 1407
>gb|AY135077.1| Drosophila melanogaster strain 16 MAPKK signal transduction kinase (Dsor1) gene, complete cds Length = 1825 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 1430 agggtggcggtgtttggcggcggg 1407
>gb|AY135075.1| Drosophila melanogaster strain 1 MAPKK signal transduction kinase (Dsor1) gene, complete cds Length = 1822 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 1427 agggtggcggtgtttggcggcggg 1404
>gb|AY135138.1| Drosophila simulans MAPKK signal transduction kinase (Dsor1) gene, complete cds Length = 1811 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 1416 agggtggcggtgtttggcggcggg 1393
>emb|BX539340.7| Zebrafish DNA sequence from clone DKEY-57K2 in linkage group 2, complete sequence Length = 234470 Score = 40.1 bits (20), Expect = 0.86 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 agcagagagcagagcggagc 24 |||||||||||||||||||| Sbjct: 66481 agcagagagcagagcggagc 66462
>emb|AJ334740.1|HSA334740 Homo sapiens genomic sequence surrounding NotI site, clone NB1-649R Length = 778 Score = 40.1 bits (20), Expect = 0.86 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ggcggcggggtgagcgggct 78 |||||||||||||||||||| Sbjct: 480 ggcggcggggtgagcgggct 461
>emb|AL954831.17| Zebrafish DNA sequence from clone DKEY-12H9 in linkage group 20, complete sequence Length = 230844 Score = 40.1 bits (20), Expect = 0.86 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 agagagcagagagcagagcg 20 |||||||||||||||||||| Sbjct: 82743 agagagcagagagcagagcg 82724
>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete sequence Length = 290970 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 200466 agggtggcggtgtttggcggcggg 200443
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 0.86 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 ggtggttggcggcggggtga 71 |||||||||||||||||||| Sbjct: 717348 ggtggttggcggcggggtga 717367
>dbj|D13782.1|DRODSOR1 D.melanogaster gene for Dsor1, complete cds Length = 2777 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agggtggcggtggttggcggcggg 67 |||||||||||| ||||||||||| Sbjct: 2109 agggtggcggtgtttggcggcggg 2086
>gb|AC154900.1| Prunus persica (peach) BAC clone 28F08, complete sequence Length = 66255 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 agagagcagagagcagagc 19 ||||||||||||||||||| Sbjct: 37480 agagagcagagagcagagc 37462
>gb|AC164597.11| Mus musculus chromosome 15, clone RP23-108H23, complete sequence Length = 190235 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 agagagcagagagcagagc 19 ||||||||||||||||||| Sbjct: 74329 agagagcagagagcagagc 74311
>gb|AY632772.1| Mycobacterium avium hypothetical protein (MA3075ptb) gene, complete cds Length = 1530 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 45 gggtggcggtggttggcggcggg 67 ||||||||||||| ||||||||| Sbjct: 89 gggtggcggtggtgggcggcggg 111
>gb|AC008285.7| Drosophila melanogaster clone BACR31P16, complete sequence Length = 177084 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 agagagcagagagcagagc 19 ||||||||||||||||||| Sbjct: 54659 agagagcagagagcagagc 54641
>gb|AC123048.4| Mus musculus BAC clone RP24-394D5 from chromosome 18, complete sequence Length = 148673 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 agagagcagagagcagagc 19 ||||||||||||||||||| Sbjct: 42694 agagagcagagagcagagc 42676 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 agagagcagagagcagagc 19 ||||||||||||||||||| Sbjct: 42558 agagagcagagagcagagc 42540
>gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940128D9, complete sequence Length = 128585 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 49 ggcggtggttggcggcggggtga 71 ||||||||| ||||||||||||| Sbjct: 22399 ggcggtggtgggcggcggggtga 22421
>gb|AC127597.5| Mus musculus BAC clone RP23-71A1 from chromosome 14, complete sequence Length = 235368 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 1 agagagcagagagcagagcggag 23 |||||||||||||||||| |||| Sbjct: 75531 agagagcagagagcagagaggag 75509
>emb|AJ246971.1|ARA246971 Ascochyta rabiei microsatellite DNA, clone ArR01D Length = 364 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 agagagcagagagcagagcggag 23 |||||||||||||||||| |||| Sbjct: 68 agagagcagagagcagaggggag 90
>gb|AC138314.4| Mus musculus BAC clone RP23-218B5 from chromosome 14, complete sequence Length = 211932 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 agagagcagagagcagagcggag 23 |||||||||||||||||| |||| Sbjct: 107485 agagagcagagagcagagaggag 107507
>gb|AC139886.3| Mus musculus BAC clone RP23-120M10 from chromosome 15, complete sequence Length = 211336 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 agagagcagagagcagagc 19 ||||||||||||||||||| Sbjct: 126325 agagagcagagagcagagc 126307
>ref|XM_813065.1| Trypanosoma cruzi strain CL Brener U6 snRNA-associated Sm-like protein LSm6p (Tc00.1047053508501.165) partial mRNA Length = 240 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 34 gagaagaatgagggtggcggtgg 56 |||||||| |||||||||||||| Sbjct: 196 gagaagaaggagggtggcggtgg 218
>gb|AC123831.4| Mus musculus BAC clone RP24-125K16 from chromosome 14, complete sequence Length = 181266 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 1 agagagcagagagcagagcggag 23 |||||||||||||||||| |||| Sbjct: 36671 agagagcagagagcagagaggag 36649
>emb|AL513187.6| Human DNA sequence from clone RP11-436H6 on chromosome 1 Contains part of the NTNG1 gene for netrin G1, complete sequence Length = 122032 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 42 tgagggtggcggtggttgg 60 ||||||||||||||||||| Sbjct: 65228 tgagggtggcggtggttgg 65210
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 38.2 bits (19), Expect = 3.4 Identities = 25/27 (92%) Strand = Plus / Minus Query: 53 gtggttggcggcggggtgagcgggctg 79 ||||| ||||||||||||| ||||||| Sbjct: 30108 gtggtcggcggcggggtgatcgggctg 30082
>gb|AE012192.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 100 of 460 of the complete genome Length = 11053 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 gtggcggtggttggcggcg 65 ||||||||||||||||||| Sbjct: 7469 gtggcggtggttggcggcg 7451
>gb|AC112217.2| Homo sapiens chromosome 3 clone CTD-2028L5, complete sequence Length = 156545 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 38 agaatgagggtggcggtgg 56 ||||||||||||||||||| Sbjct: 5010 agaatgagggtggcggtgg 4992
>gb|AC099054.2| Homo sapiens chromosome 3 clone RP11-489C3, complete sequence Length = 201564 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 38 agaatgagggtggcggtgg 56 ||||||||||||||||||| Sbjct: 56695 agaatgagggtggcggtgg 56713
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 Length = 1913118 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 40 aatgagggtggcggtggtt 58 ||||||||||||||||||| Sbjct: 517521 aatgagggtggcggtggtt 517503
>dbj|AK137936.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130041F12 product:hypothetical protein, full insert sequence Length = 1711 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 1033 agagcagagagcagagcagagca 1011
>ref|XM_690292.1| PREDICTED: Danio rerio similar to budding uninhibited by benzimidazoles 1 homolog, beta (LOC567006), partial mRNA Length = 1146 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 agagagcagagagcagagc 19 ||||||||||||||||||| Sbjct: 1068 agagagcagagagcagagc 1086
>gb|AE008686.1|AE008686 Mus musculus T-cell receptor alpha/delta locus section 4 of 4 of the complete region Length = 461875 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 442842 agagcagagagcagagcagagca 442820 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 442805 agagcagagagcagagcagagca 442783
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 48 tggcggtggttggcggcgg 66 ||||||||||||||||||| Sbjct: 3837076 tggcggtggttggcggcgg 3837058
>gb|AC158356.2| Mus musculus BAC clone RP23-475P8 from chromosome 13, complete sequence Length = 210995 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 110862 agagcagagagcagagcagagca 110884 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 110845 agagcagagagcagagcagagca 110867
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 gtggcggtggttggcggcg 65 ||||||||||||||||||| Sbjct: 3944961 gtggcggtggttggcggcg 3944979
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 59 ggcggcggggtgagcgggc 77 ||||||||||||||||||| Sbjct: 15829944 ggcggcggggtgagcgggc 15829962
>gb|AC008135.12|AC008135 Drosophila melanogaster, chromosome 3R, region 98A-98A, BAC clone BACR27H07, complete sequence Length = 168306 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 agagagcagagagcagagc 19 ||||||||||||||||||| Sbjct: 86466 agagagcagagagcagagc 86448
>dbj|AP003536.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1096D03 Length = 184422 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 59 ggcggcggggtgagcgggc 77 ||||||||||||||||||| Sbjct: 57613 ggcggcggggtgagcgggc 57631
>gb|AE003760.3| Drosophila melanogaster chromosome 3R, section 98 of 118 of the complete sequence Length = 197156 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 agagagcagagagcagagc 19 ||||||||||||||||||| Sbjct: 162278 agagagcagagagcagagc 162260
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 39 gaatgagggtggcggtggt 57 ||||||||||||||||||| Sbjct: 3492137 gaatgagggtggcggtggt 3492119
>emb|CR974592.5| Mouse DNA sequence from clone RP23-56C15 on chromosome 12, complete sequence Length = 201549 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 agagagcagagagcagagc 19 ||||||||||||||||||| Sbjct: 164079 agagagcagagagcagagc 164097
>gb|AC173480.1| Mus musculus BAC clone RP23-422D12 from chromosome 6, complete sequence Length = 185966 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 45898 agagcagagagcagagcagagca 45920
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome Length = 2056416 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 ggttggcggcggggtgagc 73 ||||||||||||||||||| Sbjct: 1298908 ggttggcggcggggtgagc 1298926
>emb|AL807830.10| Mouse DNA sequence from clone RP23-303I9 on chromosome 4, complete sequence Length = 79426 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 gagagcagagagcagagcg 20 ||||||||||||||||||| Sbjct: 5983 gagagcagagagcagagcg 6001
>emb|AL671993.7| Mouse DNA sequence from clone RP23-428E5 on chromosome X, complete sequence Length = 194106 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 agagagcagagagcagagcggag 23 |||||||||||||||||| |||| Sbjct: 68956 agagagcagagagcagagaggag 68978
>gb|M64239.1|MUSTCRA Mouse T-cell receptor alpha/delta chain locus Length = 94647 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 75614 agagcagagagcagagcagagca 75592 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 agagcagagagcagagcggagca 25 ||||||||||||||||| ||||| Sbjct: 75577 agagcagagagcagagcagagca 75555 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 604,961 Number of Sequences: 3902068 Number of extensions: 604961 Number of successful extensions: 49280 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 48671 Number of HSP's gapped (non-prelim): 608 length of query: 82 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 61 effective length of database: 17,151,101,840 effective search space: 1046217212240 effective search space used: 1046217212240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)