ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl47g03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 50 0.006
2emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete ... 48 0.024
3emb|BX640429.1| Bordetella parapertussis strain 12822, complete ... 48 0.024
4gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 44 0.37
5gb|AF321227.1|AF321227 Tribolium castaneum Ftz (ftz), Scr (scr),... 44 0.37
6gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.37
7emb|BX572608.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.5
8emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.5
9gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 1.5
10gb|AE005710.1| Caulobacter crescentus CB15 section 36 of 359 of ... 42 1.5
11gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 1.5
12gb|AF172724.1|AF172724 Caulobacter crescentus structural mainten... 42 1.5
13gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple... 42 1.5
14ref|NM_122570.2| Arabidopsis thaliana RNA binding / RNA methyltr... 40 5.8
15ref|NM_126752.2| Arabidopsis thaliana unknown protein AT2G07708 ... 40 5.8
16gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 5.8
17ref|NM_192267.1| Oryza sativa (japonica cultivar-group), predic... 40 5.8
18ref|XM_477135.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
19gb|AY649235.1| Arabidopsis thaliana hypothetical protein (At2g07... 40 5.8
20ref|NM_033036.1| Homo sapiens galactose-3-O-sulfotransferase 3 (... 40 5.8
21gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 5.8
22gb|AC183919.2| Pan troglodytes BAC clone CH251-691O9 from chromo... 40 5.8
23ref|XM_417312.1| PREDICTED: Gallus gallus similar to retinoblast... 40 5.8
24gb|AY456696.1| Arthrobacter aurescens strain TC1 plasmid pAA1 at... 40 5.8
25ref|XM_589866.2| PREDICTED: Bos taurus similar to CG10632-PA (LO... 40 5.8
26ref|XM_566696.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 5.8
27gb|AY231406.1| Arabidopsis thaliana hypothetical protein (At2g07... 40 5.8
28emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.8
29emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 40 5.8
30emb|BX640417.1| Bordetella pertussis strain Tohama I, complete g... 40 5.8
31emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 40 5.8
32emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete ... 40 5.8
33gb|BC036505.2| Homo sapiens cDNA clone IMAGE:5265532 40 5.8
34gb|AC064801.10| Homo sapiens chromosome 18, clone RP11-120K19, c... 40 5.8
35dbj|AB053232.1| Homo sapiens GAL3ST2 mRNA for galactose-3-O-sulf... 40 5.8
36gb|AE006008.1| Caulobacter crescentus CB15 section 334 of 359 of... 40 5.8
37ref|NM_166595.1| Drosophila melanogaster CG11079-RB, transcript ... 40 5.8
38ref|NM_137941.1| Drosophila melanogaster CG11079-RA, transcript ... 40 5.8
39gb|AC007729.3| Arabidopsis thaliana chromosome 2 BAC T18C6 genom... 40 5.8
40gb|AC100843.2| Homo sapiens chromosome 18, clone RP11-640A1, com... 40 5.8
41gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.8
42gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 5.8
43gb|AY026481.1| Homo sapiens beta-galactose-3-O-sulfotransferase ... 40 5.8
44gb|AF007270.1|F2P16 Arabidopsis thaliana BAC F2P16, complete seq... 40 5.8
45dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
46dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
47dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
48dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
49gb|AC008304.3|AC008304 Drosophila melanogaster, chromosome 2R, r... 40 5.8
50gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 5.8
51gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glyco... 40 5.8
52dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.8
53gb|AC106891.3| Homo sapiens BAC clone RP11-18K19 from 2, complet... 40 5.8
54dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
55dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
56dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
57dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
58dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.8
59dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
60dbj|AK111736.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
61ref|NM_207841.1| Eremothecium gossypii AAL054Wp (AAL054W), mRNA 40 5.8
62emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome 40 5.8
63gb|AE003460.2| Drosophila melanogaster chromosome 2R, section 68... 40 5.8
64dbj|AP006287.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 5.8
65emb|CT009564.11| Mouse DNA sequence from clone RP23-16F13 on chr... 40 5.8
66gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.8
67gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 5.8
68gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 5.8
69gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
70gb|AF075603.1|AF075603 Oryza sativa kinase associated protein ph... 40 5.8
71emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.8
72dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome 40 5.8
73gb|AY885227.1| Anas platyrhynchos major histocompatibility compl... 40 5.8
74emb|AL121840.4|CNS01DSR Human chromosome 14 DNA sequence BAC C-2... 40 5.8
75gb|DQ069799.1| Arabidopsis thaliana hypothetical protein (At2g07... 40 5.8
76dbj|AP001201.7| Homo sapiens genomic DNA, chromosome 11, clone:R... 40 5.8 
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 198     gccaccgcccgcgccagcgccgcgtcgtc 226
               |||| ||||||||||||||||||||||||
Sbjct: 1087491 gccagcgcccgcgccagcgccgcgtcgtc 1087463
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>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16
          Length = 348624

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 199    ccaccgcccgcgccagcgccgcgt 222
              ||||||||||||||||||||||||
Sbjct: 209270 ccaccgcccgcgccagcgccgcgt 209247
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>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14
          Length = 344321

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 199    ccaccgcccgcgccagcgccgcgt 222
              ||||||||||||||||||||||||
Sbjct: 155667 ccaccgcccgcgccagcgccgcgt 155644
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 203    cgcccgcgccagcgccgcgtcg 224
              ||||||||||||||||||||||
Sbjct: 983869 cgcccgcgccagcgccgcgtcg 983848
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>gb|AF321227.1|AF321227 Tribolium castaneum Ftz (ftz), Scr (scr), Dfd (dfd), Zen (zen), and
             Zen2 (zen2) genes, complete cds; and Pb (pb) gene, partial
             cds
          Length = 133406

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 90    cgcttctcgattccgctccgac 111
             ||||||||||||||||||||||
Sbjct: 53879 cgcttctcgattccgctccgac 53900
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 133     cgccgccgcccgcggcgagccc 154
               ||||||||||||||||||||||
Sbjct: 3945057 cgccgccgcccgcggcgagccc 3945078



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 199     ccaccgcccgcgccagcgccg 219
               |||||||||||||||||||||
Sbjct: 2020389 ccaccgcccgcgccagcgccg 2020409



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 198     gccaccgcccgcgccagcgccgcgt 222
               |||| ||||||||||||||||||||
Sbjct: 1730118 gccagcgcccgcgccagcgccgcgt 1730094



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 139     cgcccgcggcgagcccgccg 158
               ||||||||||||||||||||
Sbjct: 3925268 cgcccgcggcgagcccgccg 3925287



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 202     ccgcccgcgccagcgccgcg 221
               ||||||||||||||||||||
Sbjct: 3829454 ccgcccgcgccagcgccgcg 3829435



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 207     cgcgccagcgccgcgtcgtc 226
               ||||||||||||||||||||
Sbjct: 3286221 cgcgccagcgccgcgtcgtc 3286240



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 202     ccgcccgcgccagcgccgcg 221
               ||||||||||||||||||||
Sbjct: 2534861 ccgcccgcgccagcgccgcg 2534880



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 153    ccgccgtcgaggcccccgggcgcg 176
              ||||||||||||||| ||||||||
Sbjct: 516038 ccgccgtcgaggcccgcgggcgcg 516015
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>emb|BX572608.1| Rhodopseudomonas palustris CGA009 complete genome; segment 16/16
          Length = 227214

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 204   gcccgcgccagcgccgcgtcg 224
             |||||||||||||||||||||
Sbjct: 40542 gcccgcgccagcgccgcgtcg 40562
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>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16
          Length = 349315

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 141   cccgcggcgagcccgccgtcgaggc 165
             |||||||||||||||||| ||||||
Sbjct: 69813 cccgcggcgagcccgccgacgaggc 69837
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 200     caccgcccgcgccagcgccgcgtcg 224
               ||||||||||||| |||||||||||
Sbjct: 3626619 caccgcccgcgcctgcgccgcgtcg 3626643
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>gb|AE005710.1| Caulobacter crescentus CB15 section 36 of 359 of the complete genome
          Length = 11283

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 201  accgcccgcgccagcgccgcg 221
            |||||||||||||||||||||
Sbjct: 7294 accgcccgcgccagcgccgcg 7274
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 205     cccgcgccagcgccgcgtcgt 225
               |||||||||||||||||||||
Sbjct: 4594053 cccgcgccagcgccgcgtcgt 4594073
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>gb|AF172724.1|AF172724 Caulobacter crescentus structural maintenance of chromosomes
           protein homolog Smc (smc) gene, complete cds
          Length = 3701

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 201 accgcccgcgccagcgccgcg 221
           |||||||||||||||||||||
Sbjct: 883 accgcccgcgccagcgccgcg 903
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>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 132    ccgccgccgcccgcggcgagc 152
              |||||||||||||||||||||
Sbjct: 151667 ccgccgccgcccgcggcgagc 151687



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 132    ccgccgccgcccgcggcgagc 152
              |||||||||||||||||||||
Sbjct: 131636 ccgccgccgcccgcggcgagc 131616
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>ref|NM_122570.2| Arabidopsis thaliana RNA binding / RNA methyltransferase
          AT5G26880 mRNA, complete cds
          Length = 1085

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 73 ccctcgcctcccttctccgc 92
          ||||||||||||||||||||
Sbjct: 39 ccctcgcctcccttctccgc 20
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>ref|NM_126752.2| Arabidopsis thaliana unknown protein AT2G07708 mRNA, complete cds
          Length = 1183

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 48  ttcaggcctcctcgtccatcccgt 71
           ||||||||||||| ||||||||||
Sbjct: 913 ttcaggcctcctcttccatcccgt 890
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   ccgggcgcgtcggaggagcc 187
             ||||||||||||||||||||
Sbjct: 58159 ccgggcgcgtcggaggagcc 58178
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>ref|NM_192267.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1191

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 132 ccgccgccgcccgcggcgagcccg 155
           |||||||||||||| |||||||||
Sbjct: 104 ccgccgccgcccgctgcgagcccg 127
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>ref|XM_477135.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1758

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 130 atccgccgccgcccgcggcg 149
           ||||||||||||||||||||
Sbjct: 147 atccgccgccgcccgcggcg 128
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>gb|AY649235.1| Arabidopsis thaliana hypothetical protein (At2g07708) gene,
           complete cds
          Length = 426

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 48  ttcaggcctcctcgtccatcccgt 71
           ||||||||||||| ||||||||||
Sbjct: 413 ttcaggcctcctcttccatcccgt 390
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>ref|NM_033036.1| Homo sapiens galactose-3-O-sulfotransferase 3 (GAL3ST3), mRNA
          Length = 2103

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 202  ccgcccgcgccagcgccgcg 221
            ||||||||||||||||||||
Sbjct: 1141 ccgcccgcgccagcgccgcg 1122
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>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
              sequence
          Length = 2300533

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    cgccagcgccgcgtcgtcca 228
              ||||||||||||||||||||
Sbjct: 925604 cgccagcgccgcgtcgtcca 925585
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>gb|AC183919.2| Pan troglodytes BAC clone CH251-691O9 from chromosome 7, complete
             sequence
          Length = 188947

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    cctcgtccatcccgtcccct 76
             ||||||||||||||||||||
Sbjct: 56715 cctcgtccatcccgtcccct 56734
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>ref|XM_417312.1| PREDICTED: Gallus gallus similar to retinoblastoma-like protein 1
            isoform a; cellular protein 107; 107 kDa
            retinoblastoma-associated protein (LOC419126), mRNA
          Length = 4771

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 10   gtcatcactcctgttgcctc 29
            ||||||||||||||||||||
Sbjct: 2158 gtcatcactcctgttgcctc 2177
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>gb|AY456696.1| Arthrobacter aurescens strain TC1 plasmid pAA1 atrazine catabolic
            region, partial sequence
          Length = 161264

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 124  ggatggatccgccgccgccc 143
            ||||||||||||||||||||
Sbjct: 8412 ggatggatccgccgccgccc 8393
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>ref|XM_589866.2| PREDICTED: Bos taurus similar to CG10632-PA (LOC512359), mRNA
          Length = 4104

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 198 gccaccgcccgcgccagcgccgcg 221
           ||||||||| ||||||||||||||
Sbjct: 634 gccaccgccagcgccagcgccgcg 657
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>ref|XM_566696.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNA03560) partial mRNA
          Length = 4416

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 209  cgccagcgccgcgtcgtcca 228
            ||||||||||||||||||||
Sbjct: 4124 cgccagcgccgcgtcgtcca 4105
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>gb|AY231406.1| Arabidopsis thaliana hypothetical protein (At2g07708/T18C6.16)
           mRNA, complete cds
          Length = 1212

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 48  ttcaggcctcctcgtccatcccgt 71
           ||||||||||||| ||||||||||
Sbjct: 913 ttcaggcctcctcttccatcccgt 890
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>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 202    ccgcccgcgccagcgccgcgtcgt 225
              |||| |||||||||||||||||||
Sbjct: 205001 ccgcgcgcgccagcgccgcgtcgt 204978
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>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 202    ccgcccgcgccagcgccgcgtcgt 225
              |||| |||||||||||||||||||
Sbjct: 123748 ccgcgcgcgccagcgccgcgtcgt 123725
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>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 202    ccgcccgcgccagcgccgcgtcgt 225
              |||| |||||||||||||||||||
Sbjct: 154493 ccgcgcgcgccagcgccgcgtcgt 154516
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>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    gcccgccgtcgaggcccccg 170
              ||||||||||||||||||||
Sbjct: 263425 gcccgccgtcgaggcccccg 263444
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>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 132    ccgccgccgcccgcggcgagcccg 155
              ||||||||||||| ||||||||||
Sbjct: 123217 ccgccgccgcccgaggcgagcccg 123240
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>gb|BC036505.2| Homo sapiens cDNA clone IMAGE:5265532
          Length = 1822

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ccgcccgcgccagcgccgcg 221
           ||||||||||||||||||||
Sbjct: 68  ccgcccgcgccagcgccgcg 87
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>gb|AC064801.10| Homo sapiens chromosome 18, clone RP11-120K19, complete sequence
          Length = 167843

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 370   cacatttgggtgataattca 389
             ||||||||||||||||||||
Sbjct: 19486 cacatttgggtgataattca 19505
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>dbj|AB053232.1| Homo sapiens GAL3ST2 mRNA for galactose-3-O-sulfotransferase,
            complete cds
          Length = 2103

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 202  ccgcccgcgccagcgccgcg 221
            ||||||||||||||||||||
Sbjct: 1141 ccgcccgcgccagcgccgcg 1122
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>gb|AE006008.1| Caulobacter crescentus CB15 section 334 of 359 of the complete genome
          Length = 14619

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   ccgccgccgcccgcggcgag 151
             ||||||||||||||||||||
Sbjct: 13646 ccgccgccgcccgcggcgag 13665
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>ref|NM_166595.1| Drosophila melanogaster CG11079-RB, transcript variant B (CG11079),
           mRNA
          Length = 1319

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 123 cggatggatccgccgccgcc 142
           ||||||||||||||||||||
Sbjct: 150 cggatggatccgccgccgcc 131
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>ref|NM_137941.1| Drosophila melanogaster CG11079-RA, transcript variant A (CG11079),
           mRNA
          Length = 1093

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 123 cggatggatccgccgccgcc 142
           ||||||||||||||||||||
Sbjct: 150 cggatggatccgccgccgcc 131
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>gb|AC007729.3| Arabidopsis thaliana chromosome 2 BAC T18C6 genomic sequence, complete
             sequence
          Length = 114068

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 48    ttcaggcctcctcgtccatcccgt 71
             ||||||||||||| ||||||||||
Sbjct: 59174 ttcaggcctcctcttccatcccgt 59151
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>gb|AC100843.2| Homo sapiens chromosome 18, clone RP11-640A1, complete sequence
          Length = 180160

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 370  cacatttgggtgataattca 389
            ||||||||||||||||||||
Sbjct: 5371 cacatttgggtgataattca 5352
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    ccgcggcgagcccgccgtcg 161
              ||||||||||||||||||||
Sbjct: 620977 ccgcggcgagcccgccgtcg 620958
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>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I,
              complete sequence
          Length = 691920

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 202    ccgcccgcgccagcgccgcg 221
              ||||||||||||||||||||
Sbjct: 251216 ccgcccgcgccagcgccgcg 251197
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>gb|AY026481.1| Homo sapiens beta-galactose-3-O-sulfotransferase 3 mRNA, complete cds
          Length = 1599

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 202  ccgcccgcgccagcgccgcg 221
            ||||||||||||||||||||
Sbjct: 1019 ccgcccgcgccagcgccgcg 1000
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>gb|AF007270.1|F2P16 Arabidopsis thaliana BAC F2P16, complete sequence
          Length = 110946

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    ccctcgcctcccttctccgc 92
             ||||||||||||||||||||
Sbjct: 60626 ccctcgcctcccttctccgc 60645
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 132     ccgccgccgcccgcggcgag 151
               ||||||||||||||||||||
Sbjct: 3936599 ccgccgccgcccgcggcgag 3936580
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 130     atccgccgccgcccgcggcg 149
               ||||||||||||||||||||
Sbjct: 6083623 atccgccgccgcccgcggcg 6083604
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 132      ccgccgccgcccgcggcgag 151
                ||||||||||||||||||||
Sbjct: 30722807 ccgccgccgcccgcggcgag 30722788
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 132      ccgccgccgcccgcggcgagcccg 155
                |||||||||||||| |||||||||
Sbjct: 25749342 ccgccgccgcccgctgcgagcccg 25749319



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 72       cccctcgcctcccttctccgcttc 95
                ||||| ||||||||||||||||||
Sbjct: 18037993 cccctggcctcccttctccgcttc 18038016
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>gb|AC008304.3|AC008304 Drosophila melanogaster, chromosome 2R, region 59D2-59D3, BAC clone
              BACR04G19, complete sequence
          Length = 181955

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    cggatggatccgccgccgcc 142
              ||||||||||||||||||||
Sbjct: 126890 cggatggatccgccgccgcc 126871
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 134     gccgccgcccgcggcgagcc 153
               ||||||||||||||||||||
Sbjct: 3144068 gccgccgcccgcggcgagcc 3144087
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>gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glycosyltransferase,
              polyketide synthase type Is, acyl transferase, membrane
              protein, ABC transporter, sugar dehydratase/epimerase,
              sugar epimerase, sugar nucleotidyltransferase, sugar
              dehydratase/epimerase, thioesterase, acyl CoA ligase, amine
              oxidase, phosphopantetheinyl transferase, transcriptional
              regulator, carboxylase/carboxyltransferase,
              amidinohydrolase, amide synthetase, 5-aminolevulinate
              synthase, and acyl CoA ligase genes, complete cds; and
              unknown gene
          Length = 161719

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 138    ccgcccgcggcgagcccgccgtcg 161
              ||||||||||||||||||| ||||
Sbjct: 102974 ccgcccgcggcgagcccgctgtcg 102951
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 199     ccaccgcccgcgccagcgcc 218
               ||||||||||||||||||||
Sbjct: 4699844 ccaccgcccgcgccagcgcc 4699863



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 202     ccgcccgcgccagcgccgcg 221
               ||||||||||||||||||||
Sbjct: 4316747 ccgcccgcgccagcgccgcg 4316766
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>gb|AC106891.3| Homo sapiens BAC clone RP11-18K19 from 2, complete sequence
          Length = 36852

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 66    tcccgtcccctcgcctcccttctccgcttctc 97
             |||| ||||||| |||||||||||| ||||||
Sbjct: 27981 tcccctcccctcccctcccttctcctcttctc 28012
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>dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0054L14
          Length = 150022

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 72    cccctcgcctcccttctccgcttc 95
             ||||| ||||||||||||||||||
Sbjct: 65234 cccctggcctcccttctccgcttc 65257
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>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0504D03
          Length = 139201

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 72    cccctcgcctcccttctccgcttc 95
             ||||| ||||||||||||||||||
Sbjct: 14434 cccctggcctcccttctccgcttc 14457
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>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0487D09
          Length = 161531

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   ccgccgccgcccgcggcgag 151
             ||||||||||||||||||||
Sbjct: 62954 ccgccgccgcccgcggcgag 62935
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>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0039G05
          Length = 138429

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 132   ccgccgccgcccgcggcgagcccg 155
             |||||||||||||| |||||||||
Sbjct: 51806 ccgccgccgcccgctgcgagcccg 51783
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 132     ccgccgccgcccgcggcgag 151
               ||||||||||||||||||||
Sbjct: 2585227 ccgccgccgcccgcggcgag 2585246
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>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0008C11
          Length = 157205

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 130    atccgccgccgcccgcggcg 149
              ||||||||||||||||||||
Sbjct: 138793 atccgccgccgcccgcggcg 138774
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>dbj|AK111736.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047L09, full
           insert sequence
          Length = 1632

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 72  cccctcgcctcccttctccgcttc 95
           ||||| ||||||||||||||||||
Sbjct: 126 cccctggcctcccttctccgcttc 149
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>ref|NM_207841.1| Eremothecium gossypii AAL054Wp (AAL054W), mRNA
          Length = 369

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 202 ccgcccgcgccagcgccgcg 221
           ||||||||||||||||||||
Sbjct: 49  ccgcccgcgccagcgccgcg 30
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>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome
          Length = 366924

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 48     ttcaggcctcctcgtccatcccgt 71
              ||||||||||||| ||||||||||
Sbjct: 131380 ttcaggcctcctcttccatcccgt 131357
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>gb|AE003460.2| Drosophila melanogaster chromosome 2R, section 68 of 73 of the complete
              sequence
          Length = 299331

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    cggatggatccgccgccgcc 142
              ||||||||||||||||||||
Sbjct: 179367 cggatggatccgccgccgcc 179348
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>dbj|AP006287.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-1167A19, complete
              sequence
          Length = 208726

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    ccgcccgcgccagcgccgcg 221
              ||||||||||||||||||||
Sbjct: 158195 ccgcccgcgccagcgccgcg 158214
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>emb|CT009564.11| Mouse DNA sequence from clone RP23-16F13 on chromosome 17, complete
             sequence
          Length = 157729

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 66    tcccgtcccctcgcctcccttctc 89
             |||||||||||| |||||||||||
Sbjct: 50727 tcccgtcccctcccctcccttctc 50750
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 207     cgcgccagcgccgcgtcgtc 226
               ||||||||||||||||||||
Sbjct: 2808357 cgcgccagcgccgcgtcgtc 2808376



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 198    gccaccgcccgcgccagcgccgcg 221
              |||||||| |||||||||||||||
Sbjct: 187499 gccaccgcgcgcgccagcgccgcg 187522
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    cctgccaccgcccgcgccag 214
              ||||||||||||||||||||
Sbjct: 659212 cctgccaccgcccgcgccag 659193
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    cgtcggatggatccgccgcc 139
              ||||||||||||||||||||
Sbjct: 665981 cgtcggatggatccgccgcc 666000
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 132     ccgccgccgcccgcggcgag 151
               ||||||||||||||||||||
Sbjct: 3936573 ccgccgccgcccgcggcgag 3936554
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>gb|AF075603.1|AF075603 Oryza sativa kinase associated protein phosphatase (kapp) mRNA,
           complete cds
          Length = 1866

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 130 atccgccgccgcccgcggcg 149
           ||||||||||||||||||||
Sbjct: 172 atccgccgccgcccgcggcg 153
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>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152090

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   ccgccgccgcccgcggcgag 151
             ||||||||||||||||||||
Sbjct: 98575 ccgccgccgcccgcggcgag 98556
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>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome
          Length = 221853

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 48    ttcaggcctcctcgtccatcccgt 71
             ||||||||||||| ||||||||||
Sbjct: 10491 ttcaggcctcctcttccatcccgt 10514
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>gb|AY885227.1| Anas platyrhynchos major histocompatibility complex class I region,
             partial sequence
          Length = 36769

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 66    tcccgtcccctcgcctcccttctc 89
             |||||||||||| |||||||||||
Sbjct: 19224 tcccgtcccctctcctcccttctc 19201
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>emb|AL121840.4|CNS01DSR Human chromosome 14 DNA sequence BAC C-2251F13 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 93432

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   tcacagacactgctgacagt 260
             ||||||||||||||||||||
Sbjct: 82229 tcacagacactgctgacagt 82210
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>gb|DQ069799.1| Arabidopsis thaliana hypothetical protein (At2g07708) mRNA, complete
            cds
          Length = 1891

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 48   ttcaggcctcctcgtccatcccgt 71
            ||||||||||||| ||||||||||
Sbjct: 1607 ttcaggcctcctcttccatcccgt 1584
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>dbj|AP001201.7| Homo sapiens genomic DNA, chromosome 11, clone:RP11-821O7, complete
              sequence
          Length = 182547

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    ccgcccgcgccagcgccgcg 221
              ||||||||||||||||||||
Sbjct: 177902 ccgcccgcgccagcgccgcg 177921


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,979,168
Number of Sequences: 3902068
Number of extensions: 2979168
Number of successful extensions: 74398
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71733
Number of HSP's gapped (non-prelim): 2665
length of query: 435
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 413
effective length of database: 17,147,199,772
effective search space: 7081793505836
effective search space used: 7081793505836
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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