>GLYA_ANAMM (Q5PBM8) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine|
           methylase) (SHMT)
          Length = 430

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -2

Query: 126 LLANIANTETLALGSCFPRLPFLHTHICIS 37
           LLA+IA+   L  G C+P  PF H H+  S
Sbjct: 200 LLADIAHYSGLIAGGCYPS-PFGHAHVVTS 228

>ENV_GALV (P21415) Env polyprotein precursor [Contains: Coat protein GP70;|
           Spike protein p15E]
          Length = 667

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 14/48 (29%)
 Frame = -2

Query: 105 TETLALGSCFPRLPFLHTHICIS------------LLPLQQRW--CST 4
           TE    G C  ++PF H H+C              LLP    W  CST
Sbjct: 394 TEVSGHGLCIGKVPFTHQHLCNQTLSINSSGDHQYLLPSNHSWWACST 441

>RIN2_HUMAN (Q8WYP3) Ras and Rab interactor 2 (Ras interaction/interference|
           protein 2) (Ras inhibitor JC265) (Ras association domain
           family 4)
          Length = 895

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -3

Query: 239 SDSADEDP*GAPPLLRPIIDDGMCLAGI 156
           S  AD  P   PP  RP+  DG+C A +
Sbjct: 213 SSPADSKPPNLPPPHRPLSSDGVCPASL 240

>PQQB_PSEFL (P55172) Coenzyme PQQ synthesis protein B (Pyrroloquinoline quinone|
           biosynthesis protein B)
          Length = 303

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = -3

Query: 245 WPSDSADEDP*GAPPLLRPII--DDGMCLAGIVMVRTYSLPCC*PI*LTPKP*RSAPASR 72
           W +D   ED     PL + +   + G+    I + +++S+P C  +  TP P RSA    
Sbjct: 109 WCTDMVHEDLSTGFPLFKMLSHWNGGLSWNRIELDQSFSIPACPNLRFTPLPLRSAAPPY 168

Query: 71  AFHFF 57
           + H F
Sbjct: 169 SPHRF 173


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,952,790
Number of Sequences: 219361
Number of extensions: 458703
Number of successful extensions: 911
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)