Clone Name | bastl47f02 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 504 bits (254), Expect = e-139 Identities = 392/438 (89%) Strand = Plus / Plus Query: 1 ggaagctcttcaagatacaactcttataattcttgctatctgcgcctttgtctcgttagt 60 |||||| |||||||||||||||||||||||||||||| |||| |||||||| ||||| || Sbjct: 24520522 ggaagcacttcaagatacaactcttataattcttgctgtctgtgcctttgtatcgttggt 24520581 Query: 61 tgttggcattacgatggaaggatggccaaaaggtgctcatgatggtctaggaattgttgc 120 |||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 24520582 tgttggcattgccatggaaggatggccaaaaggtgctcatgatggtctgggaattgttgc 24520641 Query: 121 aagtatcctcttggtcgttttcgttaccgcgacaagtgactatcggcagtcgctgcaatt 180 |||||||||||||||||| || |||||||| ||||||||||||||||| || | || || Sbjct: 24520642 aagtatcctcttggtcgtgtttgttaccgcaacaagtgactatcggcaatccttacagtt 24520701 Query: 181 caaggacctggacaaggagaaaagaaaaattcaagtgcacgttacaaggaaaggtttcag 240 ||||||| ||||||||||||||| ||||| |||||||| || |||||||| ||||| || Sbjct: 24520702 caaggacttggacaaggagaaaaagaaaatacaagtgcaagtcacaaggaatggttttag 24520761 Query: 241 gcaaagaatatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcggaga 300 ||||| ||||||||||||||||||||||||||||||| ||| || | ||||| || || Sbjct: 24520762 acaaaggctatcaatatatgatcttcttcctggagatgttgtccatttagcaattggtga 24520821 Query: 301 tcaggttcctgctgatgggctcttcatttctgggttttctctgttgattagtgagtccag 360 ||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| Sbjct: 24520822 tcaggttcctgctgatgggctattcatttctgggttttctctactgattaatgagtccag 24520881 Query: 361 cctaactggtgagagtgaacctgttgtggtaaatgaagaaaacccttttcttttgtcggg 420 || ||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 24520882 tctcactggcgagagtgaacctgttgttgtaaatgaagataatccttttcttttgtcggg 24520941 Query: 421 taccaaggtccaagatgg 438 ||||| || |||||||| Sbjct: 24520942 gaccaaagttcaagatgg 24520959
>dbj|AK100436.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088M17, full insert sequence Length = 2965 Score = 504 bits (254), Expect = e-139 Identities = 392/438 (89%) Strand = Plus / Plus Query: 1 ggaagctcttcaagatacaactcttataattcttgctatctgcgcctttgtctcgttagt 60 |||||| |||||||||||||||||||||||||||||| |||| |||||||| ||||| || Sbjct: 766 ggaagcacttcaagatacaactcttataattcttgctgtctgtgcctttgtatcgttggt 825 Query: 61 tgttggcattacgatggaaggatggccaaaaggtgctcatgatggtctaggaattgttgc 120 |||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 826 tgttggcattgccatggaaggatggccaaaaggtgctcatgatggtctgggaattgttgc 885 Query: 121 aagtatcctcttggtcgttttcgttaccgcgacaagtgactatcggcagtcgctgcaatt 180 |||||||||||||||||| || |||||||| ||||||||||||||||| || | || || Sbjct: 886 aagtatcctcttggtcgtgtttgttaccgcaacaagtgactatcggcaatccttacagtt 945 Query: 181 caaggacctggacaaggagaaaagaaaaattcaagtgcacgttacaaggaaaggtttcag 240 ||||||| ||||||||||||||| ||||| |||||||| || |||||||| ||||| || Sbjct: 946 caaggacttggacaaggagaaaaagaaaatacaagtgcaagtcacaaggaatggttttag 1005 Query: 241 gcaaagaatatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcggaga 300 ||||| ||||||||||||||||||||||||||||||| ||| || | ||||| || || Sbjct: 1006 acaaaggctatcaatatatgatcttcttcctggagatgttgtccatttagcaattggtga 1065 Query: 301 tcaggttcctgctgatgggctcttcatttctgggttttctctgttgattagtgagtccag 360 ||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| Sbjct: 1066 tcaggttcctgctgatgggctattcatttctgggttttctctactgattaatgagtccag 1125 Query: 361 cctaactggtgagagtgaacctgttgtggtaaatgaagaaaacccttttcttttgtcggg 420 || ||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 1126 tctcactggcgagagtgaacctgttgttgtaaatgaagataatccttttcttttgtcggg 1185 Query: 421 taccaaggtccaagatgg 438 ||||| || |||||||| Sbjct: 1186 gaccaaagttcaagatgg 1203
>dbj|AK066259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H11, full insert sequence Length = 3668 Score = 504 bits (254), Expect = e-139 Identities = 392/438 (89%) Strand = Plus / Plus Query: 1 ggaagctcttcaagatacaactcttataattcttgctatctgcgcctttgtctcgttagt 60 |||||| |||||||||||||||||||||||||||||| |||| |||||||| ||||| || Sbjct: 783 ggaagcacttcaagatacaactcttataattcttgctgtctgtgcctttgtatcgttggt 842 Query: 61 tgttggcattacgatggaaggatggccaaaaggtgctcatgatggtctaggaattgttgc 120 |||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 843 tgttggcattgccatggaaggatggccaaaaggtgctcatgatggtctgggaattgttgc 902 Query: 121 aagtatcctcttggtcgttttcgttaccgcgacaagtgactatcggcagtcgctgcaatt 180 |||||||||||||||||| || |||||||| ||||||||||||||||| || | || || Sbjct: 903 aagtatcctcttggtcgtgtttgttaccgcaacaagtgactatcggcaatccttacagtt 962 Query: 181 caaggacctggacaaggagaaaagaaaaattcaagtgcacgttacaaggaaaggtttcag 240 ||||||| ||||||||||||||| ||||| |||||||| || |||||||| ||||| || Sbjct: 963 caaggacttggacaaggagaaaaagaaaatacaagtgcaagtcacaaggaatggttttag 1022 Query: 241 gcaaagaatatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcggaga 300 ||||| ||||||||||||||||||||||||||||||| ||| || | ||||| || || Sbjct: 1023 acaaaggctatcaatatatgatcttcttcctggagatgttgtccatttagcaattggtga 1082 Query: 301 tcaggttcctgctgatgggctcttcatttctgggttttctctgttgattagtgagtccag 360 ||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| Sbjct: 1083 tcaggttcctgctgatgggctattcatttctgggttttctctactgattaatgagtccag 1142 Query: 361 cctaactggtgagagtgaacctgttgtggtaaatgaagaaaacccttttcttttgtcggg 420 || ||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 1143 tctcactggcgagagtgaacctgttgttgtaaatgaagataatccttttcttttgtcggg 1202 Query: 421 taccaaggtccaagatgg 438 ||||| || |||||||| Sbjct: 1203 gaccaaagttcaagatgg 1220
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 504 bits (254), Expect = e-139 Identities = 392/438 (89%) Strand = Plus / Plus Query: 1 ggaagctcttcaagatacaactcttataattcttgctatctgcgcctttgtctcgttagt 60 |||||| |||||||||||||||||||||||||||||| |||| |||||||| ||||| || Sbjct: 24448728 ggaagcacttcaagatacaactcttataattcttgctgtctgtgcctttgtatcgttggt 24448787 Query: 61 tgttggcattacgatggaaggatggccaaaaggtgctcatgatggtctaggaattgttgc 120 |||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 24448788 tgttggcattgccatggaaggatggccaaaaggtgctcatgatggtctgggaattgttgc 24448847 Query: 121 aagtatcctcttggtcgttttcgttaccgcgacaagtgactatcggcagtcgctgcaatt 180 |||||||||||||||||| || |||||||| ||||||||||||||||| || | || || Sbjct: 24448848 aagtatcctcttggtcgtgtttgttaccgcaacaagtgactatcggcaatccttacagtt 24448907 Query: 181 caaggacctggacaaggagaaaagaaaaattcaagtgcacgttacaaggaaaggtttcag 240 ||||||| ||||||||||||||| ||||| |||||||| || |||||||| ||||| || Sbjct: 24448908 caaggacttggacaaggagaaaaagaaaatacaagtgcaagtcacaaggaatggttttag 24448967 Query: 241 gcaaagaatatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcggaga 300 ||||| ||||||||||||||||||||||||||||||| ||| || | ||||| || || Sbjct: 24448968 acaaaggctatcaatatatgatcttcttcctggagatgttgtccatttagcaattggtga 24449027 Query: 301 tcaggttcctgctgatgggctcttcatttctgggttttctctgttgattagtgagtccag 360 ||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| Sbjct: 24449028 tcaggttcctgctgatgggctattcatttctgggttttctctactgattaatgagtccag 24449087 Query: 361 cctaactggtgagagtgaacctgttgtggtaaatgaagaaaacccttttcttttgtcggg 420 || ||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 24449088 tctcactggcgagagtgaacctgttgttgtaaatgaagataatccttttcttttgtcggg 24449147 Query: 421 taccaaggtccaagatgg 438 ||||| || |||||||| Sbjct: 24449148 gaccaaagttcaagatgg 24449165
>emb|AL844880.3|CNS08CB3 Oryza sativa chromosome 12, . BAC OSJNBb0049H14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120071 Score = 504 bits (254), Expect = e-139 Identities = 392/438 (89%) Strand = Plus / Plus Query: 1 ggaagctcttcaagatacaactcttataattcttgctatctgcgcctttgtctcgttagt 60 |||||| |||||||||||||||||||||||||||||| |||| |||||||| ||||| || Sbjct: 91553 ggaagcacttcaagatacaactcttataattcttgctgtctgtgcctttgtatcgttggt 91612 Query: 61 tgttggcattacgatggaaggatggccaaaaggtgctcatgatggtctaggaattgttgc 120 |||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 91613 tgttggcattgccatggaaggatggccaaaaggtgctcatgatggtctgggaattgttgc 91672 Query: 121 aagtatcctcttggtcgttttcgttaccgcgacaagtgactatcggcagtcgctgcaatt 180 |||||||||||||||||| || |||||||| ||||||||||||||||| || | || || Sbjct: 91673 aagtatcctcttggtcgtgtttgttaccgcaacaagtgactatcggcaatccttacagtt 91732 Query: 181 caaggacctggacaaggagaaaagaaaaattcaagtgcacgttacaaggaaaggtttcag 240 ||||||| ||||||||||||||| ||||| |||||||| || |||||||| ||||| || Sbjct: 91733 caaggacttggacaaggagaaaaagaaaatacaagtgcaagtcacaaggaatggttttag 91792 Query: 241 gcaaagaatatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcggaga 300 ||||| ||||||||||||||||||||||||||||||| ||| || | ||||| || || Sbjct: 91793 acaaaggctatcaatatatgatcttcttcctggagatgttgtccatttagcaattggtga 91852 Query: 301 tcaggttcctgctgatgggctcttcatttctgggttttctctgttgattagtgagtccag 360 ||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| Sbjct: 91853 tcaggttcctgctgatgggctattcatttctgggttttctctactgattaatgagtccag 91912 Query: 361 cctaactggtgagagtgaacctgttgtggtaaatgaagaaaacccttttcttttgtcggg 420 || ||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 91913 tctcactggcgagagtgaacctgttgttgtaaatgaagataatccttttcttttgtcggg 91972 Query: 421 taccaaggtccaagatgg 438 ||||| || |||||||| Sbjct: 91973 gaccaaagttcaagatgg 91990
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 442 bits (223), Expect = e-121 Identities = 379/431 (87%) Strand = Plus / Plus Query: 8 cttcaagatacaactcttataattcttgctatctgcgcctttgtctcgttagttgttggc 67 |||||||||||||||||||||||||| ||| ||||||| || || ||| | |||||||| Sbjct: 8038 cttcaagatacaactcttataattctcgctgtctgcgcgttcgtgtcgctggttgttggt 8097 Query: 68 attacgatggaaggatggccaaaaggtgctcatgatggtctaggaattgttgcaagtatc 127 ||| ||||||||| ||||||||||| ||||||||||| || |||||||||||||||||| Sbjct: 8098 attgtgatggaagggtggccaaaaggcgctcatgatggccttggaattgttgcaagtatc 8157 Query: 128 ctcttggtcgttttcgttaccgcgacaagtgactatcggcagtcgctgcaattcaaggac 187 |||||||| || || || || ||||||||||||||||||||||||||||| ||||||||| Sbjct: 8158 ctcttggttgtgtttgtgactgcgacaagtgactatcggcagtcgctgcagttcaaggac 8217 Query: 188 ctggacaaggagaaaagaaaaattcaagtgcacgttacaaggaaaggtttcaggcaaaga 247 |||||||||||||||| ||||| ||||| || |||||||||| |||||||||||||| Sbjct: 8218 ctggacaaggagaaaaagaaaatccaagtacaggttacaaggagtggtttcaggcaaagg 8277 Query: 248 atatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcggagatcaggtt 307 |||| |||||||||||||||||||| ||||| ||| || | ||||| ||||||||||| Sbjct: 8278 ctatcgatatatgatcttcttcctggcgatgttgtccatttagcaattggagatcaggtc 8337 Query: 308 cctgctgatgggctcttcatttctgggttttctctgttgattagtgagtccagcctaact 367 ||||||||||||||||||||||| ||||| ||||| ||||| | ||| |||||||||||| Sbjct: 8338 cctgctgatgggctcttcatttcagggttctctctattgatcaatgaatccagcctaact 8397 Query: 368 ggtgagagtgaacctgttgtggtaaatgaagaaaacccttttcttttgtcgggtaccaag 427 ||||| ||||||||||||| ||||||||||| |||||||| || |||||||| ||||| Sbjct: 8398 ggtgaaagtgaacctgttgctgtaaatgaagataaccctttcctgttgtcggggaccaaa 8457 Query: 428 gtccaagatgg 438 || |||||||| Sbjct: 8458 gtacaagatgg 8468
>gb|AY661658.1| Sorghum bicolor clone BAC 796all, complete sequence Length = 103167 Score = 442 bits (223), Expect = e-121 Identities = 379/431 (87%) Strand = Plus / Plus Query: 8 cttcaagatacaactcttataattcttgctatctgcgcctttgtctcgttagttgttggc 67 |||||||||||||||||||||||||| ||| ||||||| || || ||| | |||||||| Sbjct: 87294 cttcaagatacaactcttataattctcgctgtctgcgcgttcgtgtcgctggttgttggt 87353 Query: 68 attacgatggaaggatggccaaaaggtgctcatgatggtctaggaattgttgcaagtatc 127 ||| ||||||||| ||||||||||| ||||||||||| || |||||||||||||||||| Sbjct: 87354 attgtgatggaagggtggccaaaaggcgctcatgatggccttggaattgttgcaagtatc 87413 Query: 128 ctcttggtcgttttcgttaccgcgacaagtgactatcggcagtcgctgcaattcaaggac 187 |||||||| || || || || ||||||||||||||||||||||||||||| ||||||||| Sbjct: 87414 ctcttggttgtgtttgtgactgcgacaagtgactatcggcagtcgctgcagttcaaggac 87473 Query: 188 ctggacaaggagaaaagaaaaattcaagtgcacgttacaaggaaaggtttcaggcaaaga 247 |||||||||||||||| ||||| ||||| || |||||||||| |||||||||||||| Sbjct: 87474 ctggacaaggagaaaaagaaaatccaagtacaggttacaaggagtggtttcaggcaaagg 87533 Query: 248 atatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcggagatcaggtt 307 |||| |||||||||||||||||||| ||||| ||| || | ||||| ||||||||||| Sbjct: 87534 ctatcgatatatgatcttcttcctggcgatgttgtccatttagcaattggagatcaggtc 87593 Query: 308 cctgctgatgggctcttcatttctgggttttctctgttgattagtgagtccagcctaact 367 ||||||||||||||||||||||| ||||| ||||| ||||| | ||| |||||||||||| Sbjct: 87594 cctgctgatgggctcttcatttcagggttctctctattgatcaatgaatccagcctaact 87653 Query: 368 ggtgagagtgaacctgttgtggtaaatgaagaaaacccttttcttttgtcgggtaccaag 427 ||||| ||||||||||||| ||||||||||| |||||||| || |||||||| ||||| Sbjct: 87654 ggtgaaagtgaacctgttgctgtaaatgaagataaccctttcctgttgtcggggaccaaa 87713 Query: 428 gtccaagatgg 438 || |||||||| Sbjct: 87714 gtacaagatgg 87724
>gb|AC135557.5| Oryza sativa chromosome 3 BAC OJ1285_H07 genomic sequence, complete sequence Length = 113685 Score = 190 bits (96), Expect = 3e-45 Identities = 291/356 (81%) Strand = Plus / Minus Query: 59 gttgttggcattacgatggaaggatggccaaaaggtgctcatgatggtctaggaattgtt 118 ||||||||||| || | |||||||||||| |||| || |||||||| | || |||||| Sbjct: 16477 gttgttggcataaccacagaaggatggccacaaggagcccatgatggcgttggcattgtt 16418 Query: 119 gcaagtatcctcttggtcgttttcgttaccgcgacaagtgactatcggcagtcgctgcaa 178 |||||||||||| | || |||| ||||||| |||||| |||||| |||||| ||||| Sbjct: 16417 gcaagtatcctccttgttgtttctgttaccggaacaagtaactatcagcagtccttgcaa 16358 Query: 179 ttcaaggacctggacaaggagaaaagaaaaattcaagtgcacgttacaaggaaaggtttc 238 |||| |||||| |||||||||||||| ||||||| || || || |||||||| || || Sbjct: 16357 ttcagggaccttgacaaggagaaaaggaaaattcttgttcaagtcacaaggaatggcttg 16298 Query: 239 aggcaaagaatatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcgga 298 || |||||| || ||| |||| ||||||||||| |||| ||| |||| || | ||| Sbjct: 16297 agacaaagagtactgatagatgaccttcttcctggtgatgctgtccatcttgctgttgga 16238 Query: 299 gatcaggttcctgctgatgggctcttcatttctgggttttctctgttgattagtgagtcc 358 |||||||||||||| ||||| || || ||||||||||||||| ||||| | |||||| Sbjct: 16237 gatcaggttcctgcagatggcctatttatttctgggttttctgtgttggtcgatgagtct 16178 Query: 359 agcctaactggtgagagtgaacctgttgtggtaaatgaagaaaacccttttctttt 414 || |||||||| ||||||||||||||| | ||||| ||||| ||||||| |||||| Sbjct: 16177 agtctaactggggagagtgaacctgtttttgtaaacgaagataacccttatctttt 16122
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 190 bits (96), Expect = 3e-45 Identities = 291/356 (81%) Strand = Plus / Plus Query: 59 gttgttggcattacgatggaaggatggccaaaaggtgctcatgatggtctaggaattgtt 118 ||||||||||| || | |||||||||||| |||| || |||||||| | || |||||| Sbjct: 23150849 gttgttggcataaccacagaaggatggccacaaggagcccatgatggcgttggcattgtt 23150908 Query: 119 gcaagtatcctcttggtcgttttcgttaccgcgacaagtgactatcggcagtcgctgcaa 178 |||||||||||| | || |||| ||||||| |||||| |||||| |||||| ||||| Sbjct: 23150909 gcaagtatcctccttgttgtttctgttaccggaacaagtaactatcagcagtccttgcaa 23150968 Query: 179 ttcaaggacctggacaaggagaaaagaaaaattcaagtgcacgttacaaggaaaggtttc 238 |||| |||||| |||||||||||||| ||||||| || || || |||||||| || || Sbjct: 23150969 ttcagggaccttgacaaggagaaaaggaaaattcttgttcaagtcacaaggaatggcttg 23151028 Query: 239 aggcaaagaatatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcgga 298 || |||||| || ||| |||| ||||||||||| |||| ||| |||| || | ||| Sbjct: 23151029 agacaaagagtactgatagatgaccttcttcctggtgatgctgtccatcttgctgttgga 23151088 Query: 299 gatcaggttcctgctgatgggctcttcatttctgggttttctctgttgattagtgagtcc 358 |||||||||||||| ||||| || || ||||||||||||||| ||||| | |||||| Sbjct: 23151089 gatcaggttcctgcagatggcctatttatttctgggttttctgtgttggtcgatgagtct 23151148 Query: 359 agcctaactggtgagagtgaacctgttgtggtaaatgaagaaaacccttttctttt 414 || |||||||| ||||||||||||||| | ||||| ||||| ||||||| |||||| Sbjct: 23151149 agtctaactggggagagtgaacctgtttttgtaaacgaagataacccttatctttt 23151204 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 134 gtcgttttcgttaccgcgacaagtgactatcggcagtcgctgcaattcaaggacctggac 193 ||||| ||||| || ||||| || ||||| |||||||||||||| ||||||||||| ||| Sbjct: 5404863 gtcgtcttcgtcacggcgaccagcgactaccggcagtcgctgcagttcaaggacctcgac 5404922 Query: 194 aaggagaa 201 |||||||| Sbjct: 5404923 aaggagaa 5404930
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 190 bits (96), Expect = 3e-45 Identities = 291/356 (81%) Strand = Plus / Plus Query: 59 gttgttggcattacgatggaaggatggccaaaaggtgctcatgatggtctaggaattgtt 118 ||||||||||| || | |||||||||||| |||| || |||||||| | || |||||| Sbjct: 23143877 gttgttggcataaccacagaaggatggccacaaggagcccatgatggcgttggcattgtt 23143936 Query: 119 gcaagtatcctcttggtcgttttcgttaccgcgacaagtgactatcggcagtcgctgcaa 178 |||||||||||| | || |||| ||||||| |||||| |||||| |||||| ||||| Sbjct: 23143937 gcaagtatcctccttgttgtttctgttaccggaacaagtaactatcagcagtccttgcaa 23143996 Query: 179 ttcaaggacctggacaaggagaaaagaaaaattcaagtgcacgttacaaggaaaggtttc 238 |||| |||||| |||||||||||||| ||||||| || || || |||||||| || || Sbjct: 23143997 ttcagggaccttgacaaggagaaaaggaaaattcttgttcaagtcacaaggaatggcttg 23144056 Query: 239 aggcaaagaatatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcgga 298 || |||||| || ||| |||| ||||||||||| |||| ||| |||| || | ||| Sbjct: 23144057 agacaaagagtactgatagatgaccttcttcctggtgatgctgtccatcttgctgttgga 23144116 Query: 299 gatcaggttcctgctgatgggctcttcatttctgggttttctctgttgattagtgagtcc 358 |||||||||||||| ||||| || || ||||||||||||||| ||||| | |||||| Sbjct: 23144117 gatcaggttcctgcagatggcctatttatttctgggttttctgtgttggtcgatgagtct 23144176 Query: 359 agcctaactggtgagagtgaacctgttgtggtaaatgaagaaaacccttttctttt 414 || |||||||| ||||||||||||||| | ||||| ||||| ||||||| |||||| Sbjct: 23144177 agtctaactggggagagtgaacctgtttttgtaaacgaagataacccttatctttt 23144232 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 134 gtcgttttcgttaccgcgacaagtgactatcggcagtcgctgcaattcaaggacctggac 193 ||||| ||||| || ||||| || ||||| |||||||||||||| ||||||||||| ||| Sbjct: 5404078 gtcgtcttcgtcacggcgaccagcgactaccggcagtcgctgcagttcaaggacctcgac 5404137 Query: 194 aaggagaa 201 |||||||| Sbjct: 5404138 aaggagaa 5404145
>dbj|AK065088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001L20, full insert sequence Length = 3446 Score = 190 bits (96), Expect = 3e-45 Identities = 291/356 (81%) Strand = Plus / Plus Query: 59 gttgttggcattacgatggaaggatggccaaaaggtgctcatgatggtctaggaattgtt 118 ||||||||||| || | |||||||||||| |||| || |||||||| | || |||||| Sbjct: 588 gttgttggcataaccacagaaggatggccacaaggagcccatgatggcgttggcattgtt 647 Query: 119 gcaagtatcctcttggtcgttttcgttaccgcgacaagtgactatcggcagtcgctgcaa 178 |||||||||||| | || |||| ||||||| |||||| |||||| |||||| ||||| Sbjct: 648 gcaagtatcctccttgttgtttctgttaccggaacaagtaactatcagcagtccttgcaa 707 Query: 179 ttcaaggacctggacaaggagaaaagaaaaattcaagtgcacgttacaaggaaaggtttc 238 |||| |||||| |||||||||||||| ||||||| || || || |||||||| || || Sbjct: 708 ttcagggaccttgacaaggagaaaaggaaaattcttgttcaagtcacaaggaatggcttg 767 Query: 239 aggcaaagaatatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcgga 298 || |||||| || ||| |||| ||||||||||| |||| ||| |||| || | ||| Sbjct: 768 agacaaagagtactgatagatgaccttcttcctggtgatgctgtccatcttgctgttgga 827 Query: 299 gatcaggttcctgctgatgggctcttcatttctgggttttctctgttgattagtgagtcc 358 |||||||||||||| ||||| || || ||||||||||||||| ||||| | |||||| Sbjct: 828 gatcaggttcctgcagatggcctatttatttctgggttttctgtgttggtcgatgagtct 887 Query: 359 agcctaactggtgagagtgaacctgttgtggtaaatgaagaaaacccttttctttt 414 || |||||||| ||||||||||||||| | ||||| ||||| ||||||| |||||| Sbjct: 888 agtctaactggggagagtgaacctgtttttgtaaacgaagataacccttatctttt 943
>gb|AC146856.8| Medicago truncatula clone mth2-16l23, complete sequence Length = 145382 Score = 85.7 bits (43), Expect = 1e-13 Identities = 285/363 (78%), Gaps = 2/363 (0%) Strand = Plus / Minus Query: 77 gaaggatggccaaaaggtgctcatgatggtctaggaattgttgcaagtatcctcttggtc 136 ||||||||||| || ||||||||||||||||| || |||||||| |||||| | |||||| Sbjct: 114951 gaaggatggcctaagggtgctcatgatggtcttgggattgttgccagtatcttattggtc 114892 Query: 137 gttttcgttaccgcgacaagtgactatcggcagtcgctgcaattcaaggacctggacaag 196 || || || || || |||||||| ||||| || || | || |||||||| |||||||| Sbjct: 114891 gtctttgtgacagcaacaagtgattatcgccaatcattacagttcaaggatttggacaag 114832 Query: 197 gagaa-aagaaaaattcaagtgcacgttacaaggaaaggtttcaggcaaagaatatcaat 255 ||||| ||||||| ||| | | || || ||||| || || | ||||| | ||| || || Sbjct: 114831 gagaagaagaaaatttcca-ttcaggtcacaagaaatggatataggcagaaaatgtctat 114773 Query: 256 atatgatcttcttcctggagatgtcgtcaatctggcaatcggagatcaggttcctgctga 315 |||||| | |||||||| ||| | || |||| || || || || || || |||||||| Sbjct: 114772 atatgaattacttcctggtgatatagtgcatcttgccattggtgaccaagtgcctgctga 114713 Query: 316 tgggctcttcatttctgggttttctctgttgattagtgagtccagcctaactggtgagag 375 ||| ||||| |||| || ||||||||||||||| |||||| || |||| || ||||| Sbjct: 114712 tggactctttgtttcaggattttctctgttgattgatgagtcaagtttaacaggagagag 114653 Query: 376 tgaacctgttgtggtaaatgaagaaaacccttttcttttgtcgggtaccaaggtccaaga 435 || ||||| ||||| || ||||| || |||||| | || || |||||||||||||| Sbjct: 114652 cgagcctgtggtggtgaacactgaaaatccatttcttctttcaggaaccaaggtccaaga 114593 Query: 436 tgg 438 ||| Sbjct: 114592 tgg 114590
>gb|AY103493.1| Medicago truncatula type IIB calcium ATPase MCA5 (MCA5) mRNA, complete cds Length = 3487 Score = 85.7 bits (43), Expect = 1e-13 Identities = 285/363 (78%), Gaps = 2/363 (0%) Strand = Plus / Plus Query: 77 gaaggatggccaaaaggtgctcatgatggtctaggaattgttgcaagtatcctcttggtc 136 ||||||||||| || ||||||||||||||||| || |||||||| |||||| | |||||| Sbjct: 713 gaaggatggcctaagggtgctcatgatggtcttgggattgttgccagtatcttattggtc 772 Query: 137 gttttcgttaccgcgacaagtgactatcggcagtcgctgcaattcaaggacctggacaag 196 || || || || || |||||||| ||||| || || | || |||||||| |||||||| Sbjct: 773 gtctttgtgacagcaacaagtgattatcgccaatcattacagttcaaggatttggacaag 832 Query: 197 gagaa-aagaaaaattcaagtgcacgttacaaggaaaggtttcaggcaaagaatatcaat 255 ||||| ||||||| ||| | | || || ||||| || || | ||||| | ||| || || Sbjct: 833 gagaagaagaaaatttcca-ttcaggtcacaagaaatggatataggcagaaaatgtctat 891 Query: 256 atatgatcttcttcctggagatgtcgtcaatctggcaatcggagatcaggttcctgctga 315 |||||| | |||||||| ||| | || |||| || || || || || || |||||||| Sbjct: 892 atatgaattacttcctggtgatatagtgcatcttgccattggtgaccaagtgcctgctga 951 Query: 316 tgggctcttcatttctgggttttctctgttgattagtgagtccagcctaactggtgagag 375 ||| ||||| |||| || ||||||||||||||| |||||| || |||| || ||||| Sbjct: 952 tggactctttgtttcaggattttctctgttgattgatgagtcaagtttaacaggagagag 1011 Query: 376 tgaacctgttgtggtaaatgaagaaaacccttttcttttgtcgggtaccaaggtccaaga 435 || ||||| ||||| || ||||| || |||||| | || || |||||||||||||| Sbjct: 1012 cgagcctgtggtggtgaacactgaaaatccatttcttctttcaggaaccaaggtccaaga 1071 Query: 436 tgg 438 ||| Sbjct: 1072 tgg 1074
>gb|AF195028.1|AF195028 Glycine max plasma membrane Ca2+-ATPase (SCA1) mRNA, complete cds Length = 3496 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 77 gaaggatggccaaaaggtgctcatgatggtctaggaattgttgcaagtatc 127 |||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 690 gaaggatggccaaagggtgctcatgatggtcttggaattgttgcaagtatc 740
>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0009J13, from chromosome 3, complete sequence Length = 147205 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 134 gtcgttttcgttaccgcgacaagtgactatcggcagtcgctgcaattcaaggacctggac 193 ||||| ||||| || ||||| || ||||| |||||||||||||| ||||||||||| ||| Sbjct: 111031 gtcgtcttcgtcacggcgaccagcgactaccggcagtcgctgcagttcaaggacctcgac 111090 Query: 194 aaggagaa 201 |||||||| Sbjct: 111091 aaggagaa 111098
>gb|AC123568.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1345H02, from chromosome 3, complete sequence Length = 145290 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 134 gtcgttttcgttaccgcgacaagtgactatcggcagtcgctgcaattcaaggacctggac 193 ||||| ||||| || ||||| || ||||| |||||||||||||| ||||||||||| ||| Sbjct: 1457 gtcgtcttcgtcacggcgaccagcgactaccggcagtcgctgcagttcaaggacctcgac 1516 Query: 194 aaggagaa 201 |||||||| Sbjct: 1517 aaggagaa 1524
>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006P09, complete sequence Length = 153950 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 134 gtcgttttcgttaccgcgacaagtgactatcggcagtcgctgcaattcaaggacctggac 193 ||||| ||||| || ||||| || ||||| |||||||||||||| ||||||||||| ||| Sbjct: 134681 gtcgtcttcgtcacggcgaccagcgactaccggcagtcgctgcagttcaaggacctcgac 134740 Query: 194 aaggagaa 201 |||||||| Sbjct: 134741 aaggagaa 134748
>dbj|AK121250.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101G05, full insert sequence Length = 3548 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 134 gtcgttttcgttaccgcgacaagtgactatcggcagtcgctgcaattcaaggacctggac 193 ||||| ||||| || ||||| || ||||| |||||||||||||| ||||||||||| ||| Sbjct: 699 gtcgtcttcgtcacggcgaccagcgactaccggcagtcgctgcagttcaaggacctcgac 758 Query: 194 aaggagaa 201 |||||||| Sbjct: 759 aaggagaa 766
>dbj|AK100415.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087M18, full insert sequence Length = 3726 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 134 gtcgttttcgttaccgcgacaagtgactatcggcagtcgctgcaattcaaggacctggac 193 ||||| ||||| || ||||| || ||||| |||||||||||||| ||||||||||| ||| Sbjct: 1017 gtcgtcttcgtcacggcgaccagcgactaccggcagtcgctgcagttcaaggacctcgac 1076 Query: 194 aaggagaa 201 |||||||| Sbjct: 1077 aaggagaa 1084
>gb|AC147000.32| Medicago truncatula clone mth2-124a16, complete sequence Length = 113682 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 77 gaaggatggccaaaaggtgctcatgatggtctaggaattgttgcaagtatc 127 ||||||||||| ||||| |||||||||||||| ||||| |||||||||||| Sbjct: 110517 gaaggatggccgaaaggagctcatgatggtcttggaatagttgcaagtatc 110567
>dbj|AP006662.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10F06, TM0347b, complete sequence Length = 71349 Score = 67.9 bits (34), Expect = 3e-08 Identities = 238/306 (77%) Strand = Plus / Minus Query: 76 ggaaggatggccaaaaggtgctcatgatggtctaggaattgttgcaagtatcctcttggt 135 |||||||||||| |||| ||||||||||||| |||||||||||||||||| | | || Sbjct: 34316 ggaaggatggccccaaggatctcatgatggtcttggaattgttgcaagtatcttactagt 34257 Query: 136 cgttttcgttaccgcgacaagtgactatcggcagtcgctgcaattcaaggacctggacaa 195 || || || || || |||||||| ||||| || || | ||||||||||| ||||||| Sbjct: 34256 tgtatttgtgacagcaacaagtgattatcgccaatcattacaattcaaggatttggacaa 34197 Query: 196 ggagaaaagaaaaattcaagtgcacgttacaaggaaaggtttcaggcaaagaatatcaat 255 ||||| | ||| ||| | || |||||||| || || | ||||| | ||| ||||| Sbjct: 34196 agagaagaaaaagatttccattcaggttacaagaaatggctataggcagaaaatgtcaat 34137 Query: 256 atatgatcttcttcctggagatgtcgtcaatctggcaatcggagatcaggttcctgctga 315 |||| || | |||||||| ||| | || |||| | || |||||||| || ||| | || Sbjct: 34136 atataatttacttcctggtgatcttgtgcatctttctattggagatcaagtccctacaga 34077 Query: 316 tgggctcttcatttctgggttttctctgttgattagtgagtccagcctaactggtgagag 375 |||| | || ||||||| |||||| |||||||| |||||| || ||||||||||||| Sbjct: 34076 tgggttatttgtttctggattttctgtgttgattgatgagtcaagtttaactggtgagag 34017 Query: 376 tgaacc 381 |||||| Sbjct: 34016 tgaacc 34011
>ref|NM_190089.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3132 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 166 gcagtcgctgcaattcaaggacctggacaaggagaa 201 |||||||||||| |||| |||||||||||||||||| Sbjct: 678 gcagtcgctgcagttcagggacctggacaaggagaa 713
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 166 gcagtcgctgcaattcaaggacctggacaaggagaa 201 |||||||||||| |||| |||||||||||||||||| Sbjct: 41215763 gcagtcgctgcagttcagggacctggacaaggagaa 41215798
>dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1150F11 Length = 130355 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 166 gcagtcgctgcaattcaaggacctggacaaggagaa 201 |||||||||||| |||| |||||||||||||||||| Sbjct: 32678 gcagtcgctgcagttcagggacctggacaaggagaa 32713
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504E02 Length = 137468 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 166 gcagtcgctgcaattcaaggacctggacaaggagaa 201 |||||||||||| |||| |||||||||||||||||| Sbjct: 112818 gcagtcgctgcagttcagggacctggacaaggagaa 112853
>dbj|AK070064.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041B03, full insert sequence Length = 3785 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 166 gcagtcgctgcaattcaaggacctggacaaggagaa 201 |||||||||||| |||| |||||||||||||||||| Sbjct: 1011 gcagtcgctgcagttcagggacctggacaaggagaa 1046
>dbj|AP004523.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03J05, TM0050, complete sequence Length = 86209 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 251 tcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcggagatcaggttcct 310 |||||||||||||| |||||||| ||| | ||| |||| || ||||||||||| ||| Sbjct: 191 tcaatatatgatctacttcctggtgatatagtccatcttaatattggagatcaggtccct 132 Query: 311 gctgatgggct 321 ||||||||||| Sbjct: 131 gctgatgggct 121 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ggaagctcttcaagatacaactct 24 |||||||||||||||||| ||||| Sbjct: 441 ggaagctcttcaagatacgactct 418
>ref|NM_119927.2| Arabidopsis thaliana ACA2 (CALCIUM ATPASE 2); calmodulin binding AT4G37640 (ACA2) mRNA, complete cds Length = 3426 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 285 atctggcaatcggagatcaggttcctgctgatgg 318 ||||||| || ||||||||||||||||||||||| Sbjct: 915 atctggcgattggagatcaggttcctgctgatgg 948
>ref|NM_102542.1| Arabidopsis thaliana ACA1; calmodulin binding AT1G27770 (ACA1) transcript variant AT1G27770.2 mRNA, complete cds Length = 3262 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 239 aggcaaagaatatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcgga 298 ||||||| ||| |||||||||||||| || ||||||||||| || |||| | || ||| Sbjct: 889 aggcaaaaaatctcaatatatgatctactccctggagatgttgttcatcttggcattgga 948 Query: 299 gatcaggttcctgctgatgggctcttcatttctgggttttct 340 || ||| |||| || |||||||| || || || ||||||||| Sbjct: 949 gaccagattccagcagatgggctttttatctcagggttttct 990 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 155 agtgactatcggcagtcgctgcaattcaaggacctgga 192 ||||| ||| |||| || |||||||||||||||||||| Sbjct: 805 agtgattataggcaatccctgcaattcaaggacctgga 842
>ref|NM_179385.1| Arabidopsis thaliana ACA1; calcium-transporting ATPase/ calmodulin binding AT1G27770 (ACA1) transcript variant AT1G27770.1 mRNA, complete cds Length = 3484 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 239 aggcaaagaatatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcgga 298 ||||||| ||| |||||||||||||| || ||||||||||| || |||| | || ||| Sbjct: 889 aggcaaaaaatctcaatatatgatctactccctggagatgttgttcatcttggcattgga 948 Query: 299 gatcaggttcctgctgatgggctcttcatttctgggttttct 340 || ||| |||| || |||||||| || || || ||||||||| Sbjct: 949 gaccagattccagcagatgggctttttatctcagggttttct 990 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 155 agtgactatcggcagtcgctgcaattcaaggacctgga 192 ||||| ||| |||| || |||||||||||||||||||| Sbjct: 805 agtgattataggcaatccctgcaattcaaggacctgga 842
>gb|BT010592.1| Arabidopsis thaliana At4g37640 gene, complete cds Length = 3045 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 285 atctggcaatcggagatcaggttcctgctgatgg 318 ||||||| || ||||||||||||||||||||||| Sbjct: 782 atctggcgattggagatcaggttcctgctgatgg 815
>emb|X69941.1|CHATACA1B A.thaliana chloroplast ACA1 mRNA encoding envelope Ca2+-ATPase Length = 3262 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 239 aggcaaagaatatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcgga 298 ||||||| ||| |||||||||||||| || ||||||||||| || |||| | || ||| Sbjct: 889 aggcaaaaaatctcaatatatgatctactccctggagatgttgttcatcttggcattgga 948 Query: 299 gatcaggttcctgctgatgggctcttcatttctgggttttct 340 || ||| |||| || |||||||| || || || ||||||||| Sbjct: 949 gaccagattccagcagatgggctttttatctcagggttttct 990 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 155 agtgactatcggcagtcgctgcaattcaaggacctgga 192 ||||| ||| |||| || |||||||||||||||||||| Sbjct: 805 agtgattataggcaatccctgcaattcaaggacctgga 842
>emb|X69940.1|CHATACA1A A.thaliana chloroplast ACA1 mRNA encoding envelope Ca2+-ATPase Length = 4667 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 239 aggcaaagaatatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcgga 298 ||||||| ||| |||||||||||||| || ||||||||||| || |||| | || ||| Sbjct: 1654 aggcaaaaaatctcaatatatgatctactccctggagatgttgttcatcttggcattgga 1713 Query: 299 gatcaggttcctgctgatgggctcttcatttctgggttttct 340 || ||| |||| || |||||||| || || || ||||||||| Sbjct: 1714 gaccagattccagcagatgggctttttatctcagggttttct 1755 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 155 agtgactatcggcagtcgctgcaattcaaggacctgga 192 ||||| ||| |||| || |||||||||||||||||||| Sbjct: 1570 agtgattataggcaatccctgcaattcaaggacctgga 1607
>emb|AL161591.2|ATCHRIV87 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 87 Length = 196339 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 285 atctggcaatcggagatcaggttcctgctgatgg 318 ||||||| || ||||||||||||||||||||||| Sbjct: 179587 atctggcgattggagatcaggttcctgctgatgg 179554
>gb|AY062484.1| Arabidopsis thaliana plasma membrane-type calcium ATPase (ACA2) (At4g37640; F19F18.130) mRNA, complete cds Length = 3426 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 285 atctggcaatcggagatcaggttcctgctgatgg 318 ||||||| || ||||||||||||||||||||||| Sbjct: 915 atctggcgattggagatcaggttcctgctgatgg 948
>emb|BX827273.1|CNS0A4B8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS30ZH07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 3218 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 285 atctggcaatcggagatcaggttcctgctgatgg 318 ||||||| || ||||||||||||||||||||||| Sbjct: 899 atctggcgattggagatcaggttcctgctgatgg 932
>gb|AC079280.4|AC079280 Arabidopsis thaliana chromosome 1 BAC F28L5 genomic sequence, complete sequence Length = 48404 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Minus Query: 239 aggcaaagaatatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcgga 298 ||||||| ||| |||||||||||||| || ||||||||||| || |||| | || ||| Sbjct: 3778 aggcaaaaaatctcaatatatgatctactccctggagatgttgttcatcttggcattgga 3719 Query: 299 gatcaggttcctgctgatgggctcttcatttctgggttttct 340 || ||| |||| || |||||||| || || || ||||||||| Sbjct: 3718 gaccagattccagcagatgggctttttatctcagggttttct 3677 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 155 agtgactatcggcagtcgctgcaattcaaggacctgga 192 ||||| ||| |||| || |||||||||||||||||||| Sbjct: 3862 agtgattataggcaatccctgcaattcaaggacctgga 3825
>gb|AC012375.3|AC012375 Genomic sequence for Arabidopsis thaliana BAC T22C5 from chromosome I, complete sequence Length = 106753 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Minus Query: 239 aggcaaagaatatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcgga 298 ||||||| ||| |||||||||||||| || ||||||||||| || |||| | || ||| Sbjct: 86706 aggcaaaaaatctcaatatatgatctactccctggagatgttgttcatcttggcattgga 86647 Query: 299 gatcaggttcctgctgatgggctcttcatttctgggttttct 340 || ||| |||| || |||||||| || || || ||||||||| Sbjct: 86646 gaccagattccagcagatgggctttttatctcagggttttct 86605 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 155 agtgactatcggcagtcgctgcaattcaaggacctgga 192 ||||| ||| |||| || |||||||||||||||||||| Sbjct: 86790 agtgattataggcaatccctgcaattcaaggacctgga 86753
>gb|AF025842.1|AF025842 Arabidopsis thaliana plasma membrane-type calcium ATPase (ACA2) mRNA, complete cds Length = 3339 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 285 atctggcaatcggagatcaggttcctgctgatgg 318 ||||||| || ||||||||||||||||||||||| Sbjct: 862 atctggcgattggagatcaggttcctgctgatgg 895
>dbj|D13984.1|ATHDCECAA Arabidopsis thaliana ACA1 gene for chloroplast envelope Ca2+-ATPase, complete cds Length = 4667 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 239 aggcaaagaatatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcgga 298 ||||||| ||| |||||||||||||| || ||||||||||| || |||| | || ||| Sbjct: 1654 aggcaaaaaatctcaatatatgatctactccctggagatgttgttcatcttggcattgga 1713 Query: 299 gatcaggttcctgctgatgggctcttcatttctgggttttct 340 || ||| |||| || |||||||| || || || ||||||||| Sbjct: 1714 gaccagattccagcagatgggctttttatctcagggttttct 1755 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 155 agtgactatcggcagtcgctgcaattcaaggacctgga 192 ||||| ||| |||| || |||||||||||||||||||| Sbjct: 1570 agtgattataggcaatccctgcaattcaaggacctgga 1607
>dbj|D13983.1|ATHRCECAA Arabidopsis thaliana mRNA for chloroplast envelope Ca2+-ATPase, complete cds Length = 3262 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 239 aggcaaagaatatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcgga 298 ||||||| ||| |||||||||||||| || ||||||||||| || |||| | || ||| Sbjct: 889 aggcaaaaaatctcaatatatgatctactccctggagatgttgttcatcttggcattgga 948 Query: 299 gatcaggttcctgctgatgggctcttcatttctgggttttct 340 || ||| |||| || |||||||| || || || ||||||||| Sbjct: 949 gaccagattccagcagatgggctttttatctcagggttttct 990 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 155 agtgactatcggcagtcgctgcaattcaaggacctgga 192 ||||| ||| |||| || |||||||||||||||||||| Sbjct: 805 agtgattataggcaatccctgcaattcaaggacctgga 842
>gb|L08469.1|ATHARAB2TH Arabidopsis thaliana envelope Ca2+-ATPase (PEA1) gene, chloroplast gene encoding chloroplast protein, complete cds Length = 4888 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 239 aggcaaagaatatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcgga 298 ||||||| ||| |||||||||||||| || ||||||||||| || |||| | || ||| Sbjct: 1653 aggcaaaaaatctcaatatatgatctactccctggagatgttgttcatcttggcattgga 1712 Query: 299 gatcaggttcctgctgatgggctcttcatttctgggttttct 340 || ||| |||| || |||||||| || || || ||||||||| Sbjct: 1713 gaccagattccagcagatgggctttttatctcagggttttct 1754 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 155 agtgactatcggcagtcgctgcaattcaaggacctgga 192 ||||| ||| |||| || |||||||||||||||||||| Sbjct: 1569 agtgattataggcaatccctgcaattcaaggacctgga 1606
>gb|L08468.1|ATHARAB1TH Arabidopsis thaliana envelope Ca2+-ATPase (PEA1) mRNA, chloroplast gene encoding chloroplast protein, complete cds Length = 3484 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 239 aggcaaagaatatcaatatatgatcttcttcctggagatgtcgtcaatctggcaatcgga 298 ||||||| ||| |||||||||||||| || ||||||||||| || |||| | || ||| Sbjct: 889 aggcaaaaaatctcaatatatgatctactccctggagatgttgttcatcttggcattgga 948 Query: 299 gatcaggttcctgctgatgggctcttcatttctgggttttct 340 || ||| |||| || |||||||| || || || ||||||||| Sbjct: 949 gaccagattccagcagatgggctttttatctcagggttttct 990 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 155 agtgactatcggcagtcgctgcaattcaaggacctgga 192 ||||| ||| |||| || |||||||||||||||||||| Sbjct: 805 agtgattataggcaatccctgcaattcaaggacctgga 842
>emb|AL035605.1|ATF19F18 Arabidopsis thaliana DNA chromosome 4, BAC clone F19F18 (ESSA project) Length = 91740 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 285 atctggcaatcggagatcaggttcctgctgatgg 318 ||||||| || ||||||||||||||||||||||| Sbjct: 56165 atctggcgattggagatcaggttcctgctgatgg 56132
>gb|AF195029.1|AF195029 Glycine max plasma membrane Ca2+-ATPase (SCA2) mRNA, complete cds Length = 3768 Score = 48.1 bits (24), Expect = 0.024 Identities = 93/116 (80%) Strand = Plus / Plus Query: 8 cttcaagatacaactcttataattcttgctatctgcgcctttgtctcgttagttgttggc 67 |||||||||||||| || || || |||||| |||| ||||| ||||| || || ||||| Sbjct: 788 cttcaagatacaaccctcatgatacttgctgtctgtgccttggtctctttggtggttggt 847 Query: 68 attacgatggaaggatggccaaaaggtgctcatgatggtctaggaattgttgcaag 123 || | |||||||| ||||| || ||||| || ||||| | || ||||||||||| Sbjct: 848 ataataatggaagggtggcccaagggtgcacaggatggaattggtattgttgcaag 903
>ref|NM_127860.1| Arabidopsis thaliana calcium-transporting ATPase/ calmodulin binding AT2G22950 mRNA, complete cds Length = 3048 Score = 44.1 bits (22), Expect = 0.38 Identities = 100/126 (79%) Strand = Plus / Plus Query: 1 ggaagctcttcaagatacaactcttataattcttgctatctgcgcctttgtctcgttagt 60 |||||| |||||||||| |||||||| ||||||| | | || || || ||||| || | Sbjct: 501 ggaagcacttcaagatatgactcttatgattcttggtgtttgtgctttcgtctctttgat 560 Query: 61 tgttggcattacgatggaaggatggccaaaaggtgctcatgatggtctaggaattgttgc 120 |||||| ||| | | ||||||||||| |||| | ||||||||||| || |||||||| Sbjct: 561 tgttgggattgcaactgaaggatggcctcaaggatcgcatgatggtcttggcattgttgc 620 Query: 121 aagtat 126 ||||| Sbjct: 621 tagtat 626 Score = 42.1 bits (21), Expect = 1.5 Identities = 54/65 (83%) Strand = Plus / Plus Query: 254 atatatgatcttcttcctggagatgtcgtcaatctggcaatcggagatcaggttcctgct 313 ||||||||| | || ||||||||||| || |||| || ||||||||||| || ||||| Sbjct: 754 atatatgatttgctccctggagatgttgttcatcttgctatcggagatcaagtccctgca 813 Query: 314 gatgg 318 ||||| Sbjct: 814 gatgg 818
>gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1764_D01, complete sequence Length = 164709 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcttcttcctggagatgtcgtc 283 |||||||||||||||||||||| Sbjct: 139969 tcttcttcctggagatgtcgtc 139948
>gb|AC004786.3| Arabidopsis thaliana chromosome 2 clone T20K9 map CIC06C07, complete sequence Length = 86686 Score = 44.1 bits (22), Expect = 0.38 Identities = 100/126 (79%) Strand = Plus / Plus Query: 1 ggaagctcttcaagatacaactcttataattcttgctatctgcgcctttgtctcgttagt 60 |||||| |||||||||| |||||||| ||||||| | | || || || ||||| || | Sbjct: 62557 ggaagcacttcaagatatgactcttatgattcttggtgtttgtgctttcgtctctttgat 62616 Query: 61 tgttggcattacgatggaaggatggccaaaaggtgctcatgatggtctaggaattgttgc 120 |||||| ||| | | ||||||||||| |||| | ||||||||||| || |||||||| Sbjct: 62617 tgttgggattgcaactgaaggatggcctcaaggatcgcatgatggtcttggcattgttgc 62676 Query: 121 aagtat 126 ||||| Sbjct: 62677 tagtat 62682 Score = 42.1 bits (21), Expect = 1.5 Identities = 54/65 (83%) Strand = Plus / Plus Query: 254 atatatgatcttcttcctggagatgtcgtcaatctggcaatcggagatcaggttcctgct 313 ||||||||| | || ||||||||||| || |||| || ||||||||||| || ||||| Sbjct: 62810 atatatgatttgctccctggagatgttgttcatcttgctatcggagatcaagtccctgca 62869 Query: 314 gatgg 318 ||||| Sbjct: 62870 gatgg 62874
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcttcttcctggagatgtcgtc 283 |||||||||||||||||||||| Sbjct: 18972591 tcttcttcctggagatgtcgtc 18972570
>gb|AF145478.1|AF145478 Mesembryanthemum crystallinum calcium ATPase mRNA, partial cds Length = 2569 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 401 aacccttttcttttgtcgggtaccaaggtccaagatgg 438 |||||||||||| | || |||||||||||||| ||||| Sbjct: 12 aacccttttcttctatctggtaccaaggtccaggatgg 49
>gb|AC107679.19| Mus musculus chromosome 1, clone RP23-256H11, complete sequence Length = 168732 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tttctctgttgattagtgagt 356 ||||||||||||||||||||| Sbjct: 116568 tttctctgttgattagtgagt 116548
>ref|NM_001003243.1| Canis familiaris tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) (TFPI), mRNA Length = 1260 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 230 aaaggtttcaggcaaagaatatcaa 254 |||||||||| |||||||||||||| Sbjct: 1126 aaaggtttcatgcaaagaatatcaa 1150
>gb|AC116106.18| Mus musculus chromosome 16, clone RP23-23D5, complete sequence Length = 252718 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggacaaggagaaaagaaaaat 210 ||||||||||||||||||||| Sbjct: 70041 ggacaaggagaaaagaaaaat 70021
>gb|AC125374.4| Mus musculus BAC clone RP23-438P19 from chromosome 9, complete sequence Length = 175440 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 aggagaaaagaaaaattcaag 215 ||||||||||||||||||||| Sbjct: 140466 aggagaaaagaaaaattcaag 140486
>gb|AC129602.3| Mus musculus BAC clone RP23-37L24 from 16, complete sequence Length = 185729 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggacaaggagaaaagaaaaat 210 ||||||||||||||||||||| Sbjct: 17116 ggacaaggagaaaagaaaaat 17136
>emb|AL162873.1|ATF8F6 Arabidopsis thaliana DNA chromosome 5, BAC clone F8F6 (ESSA project) Length = 96936 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 tctgggttttctctgttgatt 349 ||||||||||||||||||||| Sbjct: 78909 tctgggttttctctgttgatt 78929
>emb|BX908740.5| Zebrafish DNA sequence from clone DKEY-88E10 in linkage group 1, complete sequence Length = 90443 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 gatgtcgtcaatctggcaatc 295 ||||||||||||||||||||| Sbjct: 31349 gatgtcgtcaatctggcaatc 31369
>gb|S75369.1| tissue factor pathway inhibitor=factor Xa-dependent inhibitor of factor VIIa-tissue factor complex of blood coagulation [dogs, endothelial cells, mRNA, 1260 nt] Length = 1260 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 230 aaaggtttcaggcaaagaatatcaa 254 |||||||||| |||||||||||||| Sbjct: 1126 aaaggtttcatgcaaagaatatcaa 1150
>gb|AC140278.2| Mus musculus BAC clone RP24-313J18 from chromosome 17, complete sequence Length = 180727 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagaaaagaaaaattcaagt 216 |||||||||||||||||||| Sbjct: 128011 gagaaaagaaaaattcaagt 127992
>ref|NM_001032619.1| Ciona intestinalis alpha3-fucosyltransferase (ona1), mRNA Length = 1497 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 tggtctaggaattgttgcaa 122 |||||||||||||||||||| Sbjct: 233 tggtctaggaattgttgcaa 214
>emb|BX649297.15| Zebrafish DNA sequence from clone DKEY-246E14 in linkage group 7, complete sequence Length = 151318 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ggacaaggagaaaagaaaaa 209 |||||||||||||||||||| Sbjct: 31796 ggacaaggagaaaagaaaaa 31777
>emb|AL645730.10| Human DNA sequence from clone RP11-93G23 on chromosome 1 Contains the 5' end of a the gene for a novel protein and a pseudogene similar to part of NADH dehydrogenase 2 (MTND2), complete sequence Length = 153702 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 gacaaggagaaaagaaaaat 210 |||||||||||||||||||| Sbjct: 19704 gacaaggagaaaagaaaaat 19723
>gb|AC139256.5| Homo sapiens chromosome 16 clone RP11-1186N24, complete sequence Length = 143783 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagaaaagaaaaattcaagt 216 |||||||||||||||||||| Sbjct: 84368 gagaaaagaaaaattcaagt 84349
>gb|AC182429.3| Pan troglodytes BAC clone CH251-654H2 from chromosome 16, complete sequence Length = 173460 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gagaaaagaaaaattcaagt 216 |||||||||||||||||||| Sbjct: 105763 gagaaaagaaaaattcaagt 105782
>gb|AC097268.10| Pan troglodytes BAC RP43-43O8 (Roswell Park Cancer Institute) complete sequence Length = 241278 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagaaaagaaaaattcaagt 216 |||||||||||||||||||| Sbjct: 141144 gagaaaagaaaaattcaagt 141125
>gb|AC092562.4| Papio hamadryas BAC RP41-285I13 (Rosewell Park Cancer Institute BAC Library) complete sequence Length = 183586 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gagaaaagaaaaattcaagt 216 |||||||||||||||||||| Sbjct: 71267 gagaaaagaaaaattcaagt 71286
>gb|AC079403.3| Homo sapiens BAC clone RP11-704A20 from 4, complete sequence Length = 180699 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 aaggagaaaagaaaaattca 213 |||||||||||||||||||| Sbjct: 48281 aaggagaaaagaaaaattca 48300
>gb|AC079399.5| Homo sapiens BAC clone RP11-414P19 from 4, complete sequence Length = 169035 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 aaggagaaaagaaaaattca 213 |||||||||||||||||||| Sbjct: 80392 aaggagaaaagaaaaattca 80411
>gb|AC024941.30|AC024941 Homo sapiens 12 BAC RP11-900F13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172246 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tttctctgttgattagtgag 355 |||||||||||||||||||| Sbjct: 92575 tttctctgttgattagtgag 92594
>gb|AC018616.5|AC018616 Homo sapiens chromosome 8, clone RP11-157I4, complete sequence Length = 165948 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ctgggttttctctgttgatt 349 |||||||||||||||||||| Sbjct: 11287 ctgggttttctctgttgatt 11306
>gb|AC092137.3| Homo sapiens chromosome 16 clone RP11-344H15, complete sequence Length = 184891 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gagaaaagaaaaattcaagt 216 |||||||||||||||||||| Sbjct: 31108 gagaaaagaaaaattcaagt 31127
>gb|AC106788.3| Homo sapiens chromosome 16 clone RP11-368J21, complete sequence Length = 170613 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagaaaagaaaaattcaagt 216 |||||||||||||||||||| Sbjct: 155052 gagaaaagaaaaattcaagt 155033
>gb|AC092375.4| Homo sapiens chromosome 16 clone RP11-645C24, complete sequence Length = 173275 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gagaaaagaaaaattcaagt 216 |||||||||||||||||||| Sbjct: 26121 gagaaaagaaaaattcaagt 26140
>gb|AC136026.3| Homo sapiens chromosome 16 clone RP11-447K24, complete sequence Length = 184471 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gagaaaagaaaaattcaagt 216 |||||||||||||||||||| Sbjct: 142729 gagaaaagaaaaattcaagt 142748
>emb|CR942535.2| Xenopus tropicalis finished cDNA, clone TEgg138l01 Length = 3195 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ctgctgatgggctcttcatt 328 |||||||||||||||||||| Sbjct: 2920 ctgctgatgggctcttcatt 2939
>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome Length = 1267782 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 aggcaaagaatatcaatata 258 |||||||||||||||||||| Sbjct: 191647 aggcaaagaatatcaatata 191628
>gb|AF001549.1|HUAF001549 Human Chromosome 16 BAC clone CIT987SK-A-270G1, complete sequence Length = 202004 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagaaaagaaaaattcaagt 216 |||||||||||||||||||| Sbjct: 66203 gagaaaagaaaaattcaagt 66184
>emb|CT009579.20| Mouse DNA sequence from clone CH29-133M20 on chromosome 17, complete sequence Length = 219682 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gagaaaagaaaaattcaagt 216 |||||||||||||||||||| Sbjct: 15060 gagaaaagaaaaattcaagt 15079
>emb|AJ537528.1|CIN537528 Ciona intestinalis mRNA for alpha3-fucosyltransferase (ona1 gene) Length = 1497 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 tggtctaggaattgttgcaa 122 |||||||||||||||||||| Sbjct: 233 tggtctaggaattgttgcaa 214 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,243,970 Number of Sequences: 3902068 Number of extensions: 5243970 Number of successful extensions: 140134 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 139703 Number of HSP's gapped (non-prelim): 428 length of query: 438 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 416 effective length of database: 17,147,199,772 effective search space: 7133235105152 effective search space used: 7133235105152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)