ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl47e11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY136627.1| Hordeum vulgare subsp. vulgare plasma membrane P-type proton pump ATPase (Ha1) mRNA, complete cds Length = 3446 Score = 73.8 bits (37), Expect = 4e-11 Identities = 37/37 (100%) Strand = Plus / Plus Query: 19 tccccaccccaagaactccattccatctgcggaggca 55 ||||||||||||||||||||||||||||||||||||| Sbjct: 22 tccccaccccaagaactccattccatctgcggaggca 58
>dbj|BS000108.1| Pan troglodytes chromosome 22 clone:PTB-237C02, map 22, complete sequences Length = 106901 Score = 42.1 bits (21), Expect = 0.14 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 ctccactccccaccccaagaa 33 ||||||||||||||||||||| Sbjct: 33337 ctccactccccaccccaagaa 33317
>dbj|AP001709.1| Homo sapiens genomic DNA, chromosome 21q, section 53/105 Length = 340000 Score = 42.1 bits (21), Expect = 0.14 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 ctccactccccaccccaagaa 33 ||||||||||||||||||||| Sbjct: 171131 ctccactccccaccccaagaa 171111
>gb|AC091332.8| Mus musculus chromosome 17, clone RP23-12K1, complete sequence Length = 216370 Score = 42.1 bits (21), Expect = 0.14 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ccaagaactccattccatctg 47 ||||||||||||||||||||| Sbjct: 121536 ccaagaactccattccatctg 121516
>dbj|AP000244.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:B282I5, complete sequence Length = 149898 Score = 42.1 bits (21), Expect = 0.14 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 ctccactccccaccccaagaa 33 ||||||||||||||||||||| Sbjct: 89238 ctccactccccaccccaagaa 89218
>dbj|AP000205.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone f43D11-119B8, segment 3/12, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 0.14 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 ctccactccccaccccaagaa 33 ||||||||||||||||||||| Sbjct: 6119 ctccactccccaccccaagaa 6099
>ref|XM_479197.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1305 Score = 40.1 bits (20), Expect = 0.54 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 actccactccactccccacc 26 |||||||||||||||||||| Sbjct: 6 actccactccactccccacc 25
>ref|XM_418212.1| PREDICTED: Gallus gallus similar to DNA-binding protein RFX2 (LOC420092), mRNA Length = 3711 Score = 40.1 bits (20), Expect = 0.54 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ccactccactccccacccca 29 |||||||||||||||||||| Sbjct: 1141 ccactccactccccacccca 1122
>gb|AC144848.6| Mus musculus chromosome 12, clone RP24-277O16, complete sequence Length = 174668 Score = 40.1 bits (20), Expect = 0.54 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 ccccaccccaagaactccattcca 43 |||||||||||||||| ||||||| Sbjct: 132253 ccccaccccaagaactacattcca 132276
>gb|AC153793.4| Mus musculus BAC clone RP23-154L21 from chromosome 12, complete sequence Length = 232433 Score = 40.1 bits (20), Expect = 0.54 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 ccccaccccaagaactccattcca 43 |||||||||||||||| ||||||| Sbjct: 122029 ccccaccccaagaactacattcca 122052
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 0.54 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 actccactccactccccacc 26 |||||||||||||||||||| Sbjct: 25754168 actccactccactccccacc 25754149 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 ccactccactccccacccc 28 ||||||||||||||||||| Sbjct: 6068136 ccactccactccccacccc 6068154 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 2 caagtactccactccact 19 |||||||||||||||||| Sbjct: 29022734 caagtactccactccact 29022751
>gb|AC098812.3| Papio anubis clone RP41-440G22, complete sequence Length = 171720 Score = 40.1 bits (20), Expect = 0.54 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ccccaccccaagaactccat 39 |||||||||||||||||||| Sbjct: 107243 ccccaccccaagaactccat 107262
>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524E08 Length = 154696 Score = 40.1 bits (20), Expect = 0.54 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 actccactccactccccacc 26 |||||||||||||||||||| Sbjct: 71330 actccactccactccccacc 71311
>dbj|AK063642.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-G12, full insert sequence Length = 1305 Score = 40.1 bits (20), Expect = 0.54 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 actccactccactccccacc 26 |||||||||||||||||||| Sbjct: 6 actccactccactccccacc 25
>gb|AC005304.1|AC005304 Homo sapiens chromosome 17, clone hRPK.131_K_5, complete sequence Length = 164017 Score = 40.1 bits (20), Expect = 0.54 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ccactccactccccacccca 29 |||||||||||||||||||| Sbjct: 80172 ccactccactccccacccca 80153
>emb|AL954388.5| Mouse DNA sequence from clone RP23-395P6 on chromosome 2, complete sequence Length = 131825 Score = 40.1 bits (20), Expect = 0.54 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ccactccactccccacccca 29 |||||||||||||||||||| Sbjct: 120808 ccactccactccccacccca 120789
>gb|AC115341.6| Rattus norvegicus 3 BAC CH230-248O1 (Children's Hospital Oakland Research Institute) complete sequence Length = 237425 Score = 38.2 bits (19), Expect = 2.1 Identities = 25/27 (92%) Strand = Plus / Minus Query: 7 actccactccactccccaccccaagaa 33 |||||||||||| ||||||||| |||| Sbjct: 37476 actccactccacaccccacccccagaa 37450
>ref|XM_329613.1| Neurospora crassa OR74A hypothetical protein (NCU08569.1) partial mRNA Length = 1341 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 30 agaactccattccatctgc 48 ||||||||||||||||||| Sbjct: 1227 agaactccattccatctgc 1209
>ref|XM_957738.1| Neurospora crassa OR74A hypothetical protein (NCU08569.1) partial mRNA Length = 1341 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 30 agaactccattccatctgc 48 ||||||||||||||||||| Sbjct: 1227 agaactccattccatctgc 1209
>gb|AC107837.11| Mus musculus chromosome 1, clone RP23-272H13, complete sequence Length = 189415 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 actccactccccaccccaa 30 ||||||||||||||||||| Sbjct: 137806 actccactccccaccccaa 137824
>gb|AC124552.3| Mus musculus BAC clone RP23-222M11 from chromosome 19, complete sequence Length = 237281 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 ccactccactccccacccc 28 ||||||||||||||||||| Sbjct: 73766 ccactccactccccacccc 73784
>gb|AC102551.8| Mus musculus chromosome 16, clone RP23-154N19, complete sequence Length = 232454 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 cactccactccccacccca 29 ||||||||||||||||||| Sbjct: 199439 cactccactccccacccca 199457
>gb|AC138174.9| Mus musculus, clone RP24-198I22, complete sequence Length = 177516 Score = 38.2 bits (19), Expect = 2.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 7 actccactccactccccacccca 29 |||||||||||||||||| |||| Sbjct: 113705 actccactccactccccaaccca 113727
>emb|AL132825.35|HSDJ756N5 Human DNA sequence from clone RP4-756N5 on chromosome 20q11.21-12 Contains the MYH7B gene for myosin heavy polypeptide 7B (cardiac muscle) beta, the C20orf188 gene for a novel protein similar to Trp4-associated protein TAP1 (ABCB2) and two CpG islands, complete sequence Length = 123782 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 actccactccccaccccaa 30 ||||||||||||||||||| Sbjct: 36285 actccactccccaccccaa 36267
>emb|AL596095.18| Mouse DNA sequence from clone RP23-188H3 on chromosome 11 Contains the 3' end of the Il4 gene for interleukin 4, the Kif3a gene for kinesin family member 3A, a novel gene, the Sept8 gene for septin 8, a ribosomal protein L9 (RPL9) pseudogene, three novel genes (A830006N08) (1300007L22Rik) and six CpG islands, complete sequence Length = 170943 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 ctccactccccaccccaag 31 ||||||||||||||||||| Sbjct: 44041 ctccactccccaccccaag 44023
>gb|AC010711.5| Drosophila melanogaster 3L BAC RP98-22D12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187438 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 actccactccactccccac 25 ||||||||||||||||||| Sbjct: 100101 actccactccactccccac 100119
>gb|AC091128.2| Drosophila melanogaster 3L BAC RP98-17O7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170465 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 actccactccactccccac 25 ||||||||||||||||||| Sbjct: 19770 actccactccactccccac 19788
>tpg|BK001862.1| TPA: TPA_inf: Drosophila melanogaster HDC07870 (HDC07870) gene, complete cds Length = 1836 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 actccactccactccccac 25 ||||||||||||||||||| Sbjct: 486 actccactccactccccac 504
>gb|AC004155.1|AC004155 Mus musculus DNA from BAC 10818 containing the Ercc-4 gene, complete sequence Length = 128026 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 actccactccactccccac 25 ||||||||||||||||||| Sbjct: 4798 actccactccactccccac 4780
>gb|AC009132.9| Homo sapiens chromosome 16 clone RP11-503F24, complete sequence Length = 216342 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ccccaccccaagaactcca 38 ||||||||||||||||||| Sbjct: 135202 ccccaccccaagaactcca 135184
>gb|AC068043.7| Homo sapiens BAC clone RP11-505B22 from 2, complete sequence Length = 162217 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 25 ccccaagaactccattcca 43 ||||||||||||||||||| Sbjct: 145764 ccccaagaactccattcca 145782
>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008C11 Length = 157205 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 ccactccactccccacccc 28 ||||||||||||||||||| Sbjct: 123306 ccactccactccccacccc 123324
>dbj|AB111465.1| Galago senegalensis SWS pseudogene for blue sensitive cone opsin Length = 4567 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 ccactccactccccacccc 28 ||||||||||||||||||| Sbjct: 488 ccactccactccccacccc 506
>emb|AJ322838.1|HSA322838 Homo sapiens genomic sequence surrounding NotI site, clone NR1-TE3R Length = 647 Score = 38.2 bits (19), Expect = 2.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 32 aactccattccatctgcggaggc 54 |||||||||||| |||||||||| Sbjct: 72 aactccattccagctgcggaggc 94
>gb|AE003470.4| Drosophila melanogaster chromosome 3L, section 4 of 83 of the complete sequence Length = 318699 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 actccactccactccccac 25 ||||||||||||||||||| Sbjct: 224649 actccactccactccccac 224667
>dbj|AP000654.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-9H2, complete sequence Length = 108232 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 ctccactccccaccccaag 31 ||||||||||||||||||| Sbjct: 3451 ctccactccccaccccaag 3433
>dbj|AP000463.2| Homo sapiens genomic DNA, chromosome 11q clone:P198, complete sequences Length = 87523 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 ctccactccactccccacc 26 ||||||||||||||||||| Sbjct: 71415 ctccactccactccccacc 71433
>emb|AL833804.16| Mouse DNA sequence from clone RP23-20A6 on chromosome 2, complete sequence Length = 200521 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 ccactccactccccacccc 28 ||||||||||||||||||| Sbjct: 173830 ccactccactccccacccc 173848
>emb|CT010568.14| Mouse DNA sequence from clone RP23-290F22 on chromosome 16, complete sequence Length = 203101 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 cactccactccccacccca 29 ||||||||||||||||||| Sbjct: 78032 cactccactccccacccca 78050
>emb|AL731700.12| Mouse DNA sequence from clone RP23-239G1 on chromosome 2, complete sequence Length = 187667 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 19 tccccaccccaagaactcc 37 ||||||||||||||||||| Sbjct: 185809 tccccaccccaagaactcc 185827
>dbj|AB017653.1| Homo sapiens genomic DNA, chromosome 11q23.2, clone:P198, complete sequence Length = 87523 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 ctccactccactccccacc 26 ||||||||||||||||||| Sbjct: 16109 ctccactccactccccacc 16091
>emb|AL732542.5| Mouse DNA sequence from clone RP23-92H5 on chromosome 2, complete sequence Length = 72586 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 19 tccccaccccaagaactcc 37 ||||||||||||||||||| Sbjct: 142 tccccaccccaagaactcc 160
>dbj|AP003179.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-713B9, complete sequence Length = 112998 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 ctccactccactccccacc 26 ||||||||||||||||||| Sbjct: 13638 ctccactccactccccacc 13656
>gb|AC150429.2| Branchiostoma floridae clone CH302-92H15, complete sequence Length = 112163 Score = 36.2 bits (18), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 12 actccactccccaccccaagaa 33 |||||||| ||||||||||||| Sbjct: 48576 actccactgcccaccccaagaa 48597
>gb|AC169669.1| Mus musculus chromosome 7, clone wi1-1415D6, complete sequence Length = 37683 Score = 36.2 bits (18), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 15 ccactccccaccccaagaactc 36 |||| ||||||||||||||||| Sbjct: 20243 ccaccccccaccccaagaactc 20222
>gb|AC102735.9| Mus musculus chromosome 5, clone RP24-237I4, complete sequence Length = 167871 Score = 36.2 bits (18), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 17 actccccaccccaagaactcca 38 |||||||| ||||||||||||| Sbjct: 4276 actccccagcccaagaactcca 4297
>ref|XM_481934.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1535 Score = 36.2 bits (18), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 8 ctccactccactccccacccca 29 |||||||||||||||| ||||| Sbjct: 63 ctccactccactcccctcccca 84
>ref|XM_519743.1| PREDICTED: Pan troglodytes similar to ribosomal protein L10a (LOC464158), mRNA Length = 720 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 tccactccccaccccaag 31 |||||||||||||||||| Sbjct: 200 tccactccccaccccaag 217
>gb|BC107066.1| Homo sapiens cDNA clone IMAGE:40007824, partial cds Length = 2425 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 ctccactccactccccac 25 |||||||||||||||||| Sbjct: 1877 ctccactccactccccac 1894
>ref|XM_524750.1| PREDICTED: Pan troglodytes similar to ribosomal protein L10a (LOC469365), mRNA Length = 558 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 tccactccccaccccaag 31 |||||||||||||||||| Sbjct: 73 tccactccccaccccaag 90
>gb|AC158943.9| Mus musculus chromosome 1, clone RP24-272N10, complete sequence Length = 186003 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 ctccactccactccccac 25 |||||||||||||||||| Sbjct: 124776 ctccactccactccccac 124759
>gb|AC131303.8| Mus musculus chromosome 1, clone RP24-119O19, complete sequence Length = 187110 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 20 ccccaccccaagaactcc 37 |||||||||||||||||| Sbjct: 164592 ccccaccccaagaactcc 164609
>gb|AC099582.7| Mus musculus chromosome 1, clone RP23-188D7, complete sequence Length = 192016 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 20 ccccaccccaagaactcc 37 |||||||||||||||||| Sbjct: 12709 ccccaccccaagaactcc 12726
>gb|AC118934.9| Mus musculus chromosome 19, clone RP24-172J14, complete sequence Length = 152728 Score = 36.2 bits (18), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 8 ctccactccactccccacccca 29 |||||| ||||||||||||||| Sbjct: 80366 ctccaccccactccccacccca 80387
>gb|AC125446.12| Mus musculus chromosome 14, clone RP24-501J23, complete sequence Length = 159722 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 ctccactccccaccccaa 30 |||||||||||||||||| Sbjct: 100575 ctccactccccaccccaa 100592
>gb|AC138026.4| Mus musculus BAC clone RP24-501L6 from chromosome 10, complete sequence Length = 183477 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 20 ccccaccccaagaactcc 37 |||||||||||||||||| Sbjct: 121624 ccccaccccaagaactcc 121641
>gb|AC004891.1| Homo sapiens PAC clone RP4-800L12 from 7, complete sequence Length = 112621 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 ctccactccactccccac 25 |||||||||||||||||| Sbjct: 673 ctccactccactccccac 656
>gb|AC125357.4| Mus musculus BAC clone RP23-235J18 from chromosome 9, complete sequence Length = 217511 Score = 36.2 bits (18), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 7 actccactccactccccacccc 28 |||||||||| ||||||||||| Sbjct: 140680 actccactcctctccccacccc 140701
>gb|AC139350.3| Mus musculus BAC clone RP24-254D18 from chromosome 15, complete sequence Length = 161300 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 cactccactccccacccc 28 |||||||||||||||||| Sbjct: 109882 cactccactccccacccc 109899
>gb|AC124444.4| Mus musculus BAC clone RP24-185P7 from chromosome 7, complete sequence Length = 184996 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 ctccactccactccccac 25 |||||||||||||||||| Sbjct: 101512 ctccactccactccccac 101529
>gb|AC121994.4| Mus musculus BAC clone RP24-301N9 from chromosome 6, complete sequence Length = 165506 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 cactccactccccacccc 28 |||||||||||||||||| Sbjct: 51827 cactccactccccacccc 51844
>gb|AC123857.4| Mus musculus BAC clone RP23-344L21 from chromosome 13, complete sequence Length = 192371 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 ctccactccccaccccaa 30 |||||||||||||||||| Sbjct: 136133 ctccactccccaccccaa 136150
>emb|CR456637.3| Platypus DNA sequence from clone XX-104A18, complete sequence Length = 110477 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 13 ctccactccccaccccaa 30 |||||||||||||||||| Sbjct: 92825 ctccactccccaccccaa 92808
>gb|AC122287.4| Mus musculus BAC clone RP23-253A15 from 1, complete sequence Length = 226926 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 13 ctccactccccaccccaa 30 |||||||||||||||||| Sbjct: 81539 ctccactccccaccccaa 81522
>gb|AC122912.2| Mus musculus BAC clone RP23-61E5 from 7, complete sequence Length = 255062 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 ctccactccactccccac 25 |||||||||||||||||| Sbjct: 251163 ctccactccactccccac 251146
>gb|AY242112.1| Sus scrofa EWB tyrosine hydroxylase (TH) gene, exon 14 and partial cds; preproinsulin (INS) gene, complete cds; and insulin-like growth factor 2 preproprotein (IGF2) gene, complete cds, alternatively spliced Length = 28397 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 ctccccaccccaagaact 35 |||||||||||||||||| Sbjct: 10041 ctccccaccccaagaact 10058
>gb|AY242111.1| Sus scrofa H205 tyrosine hydroxylase (TH) gene, exon 14; preproinsulin (INS) gene, complete cds; and insulin-like growth factor 2 preproprotein (IGF2) gene, complete cds, alternatively spliced Length = 28190 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 ctccccaccccaagaact 35 |||||||||||||||||| Sbjct: 9884 ctccccaccccaagaact 9901
>gb|AY242110.1| Sus scrofa H254 tyrosine hydroxylase (TH) gene, exon 14; preproinsulin (INS) gene, complete cds; and insulin-like growth factor 2 preproprotein (IGF2) gene, complete cds, alternatively spliced Length = 28177 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 ctccccaccccaagaact 35 |||||||||||||||||| Sbjct: 9887 ctccccaccccaagaact 9904
>gb|AY242109.1| Sus scrofa JWB tyrosine hydroxylase (TH) gene, exon 14; preproinsulin (INS) gene, complete cds; and insulin-like growth factor 2 preproprotein (IGF2) gene, complete cds, alternatively spliced Length = 28188 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 ctccccaccccaagaact 35 |||||||||||||||||| Sbjct: 9911 ctccccaccccaagaact 9928
>gb|AY242108.1| Sus scrofa LRJ tyrosine hydroxylase (TH) gene, exon 14 and partial cds; preproinsulin (INS) gene, complete cds; and insulin-like growth factor 2 preproprotein (IGF2) gene, complete cds, alternatively spliced Length = 28209 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 ctccccaccccaagaact 35 |||||||||||||||||| Sbjct: 9936 ctccccaccccaagaact 9953
>gb|AY242107.1| Sus scrofa LW1224 tyrosine hydroxylase (TH) gene, exon 14 and partial cds; preproinsulin (INS) gene, complete cds; and insulin-like growth factor 2 preproprotein (IGF2) gene, complete cds, alternatively spliced Length = 28658 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 ctccccaccccaagaact 35 |||||||||||||||||| Sbjct: 10133 ctccccaccccaagaact 10150
>gb|AY242106.1| Sus scrofa LW1461 tyrosine hydroxylase (TH) gene, exon 14 and partial cds; preproinsulin (INS) gene, complete cds; and insulin-like growth factor 2 preproprotein (IGF2) gene, complete cds, alternatively spliced Length = 28658 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 ctccccaccccaagaact 35 |||||||||||||||||| Sbjct: 10133 ctccccaccccaagaact 10150
>gb|AY242105.1| Sus scrofa LW197 tyrosine hydroxylase (TH) gene, exon 14 and partial cds; preproinsulin (INS) gene, complete cds; and insulin-like growth factor 2 preproprotein (IGF2) gene, complete cds, alternatively spliced Length = 28267 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 ctccccaccccaagaact 35 |||||||||||||||||| Sbjct: 9953 ctccccaccccaagaact 9970
>gb|AY242104.1| Sus scrofa LW209 tyrosine hydroxylase (TH) gene, exon 14 and partial cds; preproinsulin (INS) gene, complete cds; and insulin-like growth factor 2 preproprotein (IGF2) gene, complete cds, alternatively spliced Length = 28684 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 ctccccaccccaagaact 35 |||||||||||||||||| Sbjct: 10160 ctccccaccccaagaact 10177
>gb|AY242103.1| Sus scrofa LW3 tyrosine hydroxylase (TH) gene, exon 14 and partial cds; preproinsulin (INS) gene, complete cds; and insulin-like growth factor 2 preproprotein (IGF2) gene, complete cds, alternatively spliced Length = 28376 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 ctccccaccccaagaact 35 |||||||||||||||||| Sbjct: 10036 ctccccaccccaagaact 10053
>gb|AY242102.1| Sus scrofa LW33361 tyrosine hydroxylase (TH) gene, exon 14 and partial cds; preproinsulin (INS) gene, complete cds; and insulin-like growth factor 2 preproprotein (IGF2) gene, complete cds, alternatively spliced Length = 28661 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 ctccccaccccaagaact 35 |||||||||||||||||| Sbjct: 10140 ctccccaccccaagaact 10157
>gb|AY242101.1| Sus scrofa LW419 tyrosine hydroxylase (TH) gene, exon 14 and partial cds; preproinsulin (INS) gene, complete cds; and insulin-like growth factor 2 preproprotein (IGF2) gene, complete cds, alternatively spliced Length = 28659 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 ctccccaccccaagaact 35 |||||||||||||||||| Sbjct: 10134 ctccccaccccaagaact 10151
>gb|AY242100.1| Sus scrofa LW463 tyrosine hydroxylase (TH) gene, exon 14 and partial cds; preproinsulin (INS) gene, complete cds; and insulin-like growth factor 2 preproprotein (IGF2) gene, complete cds, alternatively spliced Length = 28649 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 ctccccaccccaagaact 35 |||||||||||||||||| Sbjct: 10127 ctccccaccccaagaact 10144
>gb|AY242099.1| Sus scrofa M220 tyrosine hydroxylase (TH) gene, exon 14; preproinsulin (INS) gene, complete cds; and insulin-like growth factor 2 preproprotein (IGF2) gene, complete cds, alternatively spliced Length = 28219 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 ctccccaccccaagaact 35 |||||||||||||||||| Sbjct: 9912 ctccccaccccaagaact 9929
>gb|AY242098.1| Sus scrofa P208 tyrosine hydroxylase (TH) gene, exon 14 and partial cds; preproinsulin (INS) gene, complete cds; and insulin-like growth factor 2 preproprotein (IGF2) gene, complete cds, alternatively spliced Length = 28593 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 ctccccaccccaagaact 35 |||||||||||||||||| Sbjct: 10120 ctccccaccccaagaact 10137
>emb|CR716275.2|CNS0GFMK Tetraodon nigroviridis full-length cDNA Length = 473 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 35 tccattccatctgcggag 52 |||||||||||||||||| Sbjct: 248 tccattccatctgcggag 231
>gb|AC091731.4| Homo sapiens BAC clone RP11-343F24 from 7, complete sequence Length = 114253 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 actccactccactcccca 24 |||||||||||||||||| Sbjct: 62307 actccactccactcccca 62290
>gb|AC093172.3| Homo sapiens BAC clone RP11-747K3 from 7, complete sequence Length = 24934 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 ctccactccactccccac 25 |||||||||||||||||| Sbjct: 1328 ctccactccactccccac 1345
>gb|AC142299.1| Pan troglodytes BAC clone RP43-121O18 from 7, complete sequence Length = 146878 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 ctccactccccaccccaa 30 |||||||||||||||||| Sbjct: 16659 ctccactccccaccccaa 16676
>gb|AC142340.1| Pan troglodytes BAC clone RP43-43B11 from 7, complete sequence Length = 173662 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 ctccactccactccccac 25 |||||||||||||||||| Sbjct: 101492 ctccactccactccccac 101475
>emb|AL606537.10| Human DNA sequence from clone RP11-53A1 on chromosome 1 Contains the 3' end of the PROX1 gene for prospero-related homeobox protein 1, complete sequence Length = 116821 Score = 36.2 bits (18), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 15 ccactccccaccccaagaactc 36 |||| ||||||||||||||||| Sbjct: 51750 ccaccccccaccccaagaactc 51729
>emb|AL356952.18| Human DNA sequence from clone RP11-809M12 on chromosome 10 Contains a novel gene and a CpG island, complete sequence Length = 129950 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 13 ctccactccccaccccaa 30 |||||||||||||||||| Sbjct: 10832 ctccactccccaccccaa 10815
>emb|AL359375.16| Human DNA sequence from clone RP11-93K18 on chromosome 10, complete sequence Length = 126846 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 tccactccccaccccaag 31 |||||||||||||||||| Sbjct: 75111 tccactccccaccccaag 75094
>emb|AL357632.11| Human DNA sequence from clone RP11-432D22 on chromosome 1 Contains a ribosomal protein L10a (RPL10A) pseudogene, complete sequence Length = 24813 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 tccactccccaccccaag 31 |||||||||||||||||| Sbjct: 23952 tccactccccaccccaag 23969
>gb|AC098563.6| Rattus norvegicus 1 BAC CH230-123A15 (Children's Hospital Oakland Research Institute) complete sequence Length = 250414 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 actccccaccccaagaac 34 |||||||||||||||||| Sbjct: 93940 actccccaccccaagaac 93923
>emb|AL137002.19| Human DNA sequence from clone RP11-98F14 on chromosome 13q22.1-31.1 Contains the 3' end of the MCF2L gene for MCF.2 cell line derived transforming sequence-like, the F7 gene for coagulation factor VII (serum prothrombin conversion accelerator), the F10 gene for coagulation factor X, a lysyl-tRNA synthetase (KARS) pseudogene, the PROZ gene for protein Z, vitamin K-dependent plasma glycoprotein (PZ), the 3' end of a novel gene (FLJ11305) and six CpG islands, complete sequence Length = 132933 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 ctccactccactccccac 25 |||||||||||||||||| Sbjct: 22487 ctccactccactccccac 22504
>emb|AL133215.17| Human DNA sequence from clone RP11-108L7 on chromosome 10 Contains the 3' end of the C10orf6 gene for chromosome 10 open reading frame 6, the SEMA4G gene for sema domain immunoglobulin domain (Ig) transmembrane domain (TM) and short cytoplasmic domain (semaphorin) 4G, the MRPL43 gene for mitochondrial ribosomal protein L43, the C10orf2 gene for chromosome 10 open reading frame 2, the gene for a novel protein (KIAA1813) (LAPSER1), a novel gene, the gene for a novel protein (FLJ23209 FLJ00011), the gene for a novel tricarboxylate carrier domain containing protein (FLJ34185 FLJ35692), the gene for a novel kazal-type serine protease inhibitor domain and immunoglobulin domain containing protein (FKSG28) (FKSG4), the 3' end of a novel gene and six CpG islands, complete sequence Length = 181086 Score = 36.2 bits (18), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 7 actccactccactccccacccc 28 |||||||||||| ||||||||| Sbjct: 146128 actccactccaccccccacccc 146107
>gb|AC015813.12| Homo sapiens, clone RP11-159D12, complete sequence Length = 181494 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 ctccactccactccccac 25 |||||||||||||||||| Sbjct: 92703 ctccactccactccccac 92720
>emb|AL714011.12| Mouse DNA sequence from clone RP23-380O17 on chromosome 4 Contains a CpG island, complete sequence Length = 166093 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 ccactccactccccaccc 27 |||||||||||||||||| Sbjct: 132870 ccactccactccccaccc 132853
>gb|AC120036.5| Homo sapiens chromosome 8, clone RP11-1134I14, complete sequence Length = 177423 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 tccactccccaccccaag 31 |||||||||||||||||| Sbjct: 124205 tccactccccaccccaag 124222
>gb|AC103874.2| Homo sapiens chromosome 15, clone RP11-907B8, complete sequence Length = 158897 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 cactccactccccacccc 28 |||||||||||||||||| Sbjct: 89032 cactccactccccacccc 89049
>gb|AY044828.1| Sus scrofa tyrosine hydroxylase gene, partial cds; and preproinsulin (INS) and insulin-like-growth factor 2 preproprotein (IGF2) genes, complete cds, alternatively spliced Length = 32467 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 ctccccaccccaagaact 35 |||||||||||||||||| Sbjct: 12135 ctccccaccccaagaact 12152
>gb|AC119428.2| Homo sapiens chromosome 1 clone RP11-117D22, complete sequence Length = 67437 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 39 ttccatctgcggaggcat 56 |||||||||||||||||| Sbjct: 9914 ttccatctgcggaggcat 9897
>gb|AC083963.6| Homo sapiens chromosome 8, clone RP11-91A19, complete sequence Length = 146377 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 tccactccccaccccaag 31 |||||||||||||||||| Sbjct: 107590 tccactccccaccccaag 107607
>gb|AF230637.5| Homo sapiens chromosome 8 clone RP1-84O15 map 8p21-p11, complete sequence Length = 90636 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 tccactccccaccccaag 31 |||||||||||||||||| Sbjct: 63568 tccactccccaccccaag 63551
>gb|AC011483.7| Homo sapiens chromosome 19 clone CTB-147C22, complete sequence Length = 107487 Score = 36.2 bits (18), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 8 ctccactccactccccacccca 29 |||||| ||||||||||||||| Sbjct: 43667 ctccaccccactccccacccca 43688
>dbj|AK123267.1| Homo sapiens cDNA FLJ41273 fis, clone BRAMY2036567, moderately similar to GUANINE NUCLEOTIDE EXCHANGE FACTOR DBS Length = 3027 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 ctccactccactccccac 25 |||||||||||||||||| Sbjct: 2323 ctccactccactccccac 2340
>dbj|AK092739.1| Homo sapiens cDNA FLJ35420 fis, clone SMINT2001183 Length = 3206 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 ctccactccactccccac 25 |||||||||||||||||| Sbjct: 2504 ctccactccactccccac 2521
>gb|AC079269.8| Homo sapiens chromosome 10 clone RP11-379L21, complete sequence Length = 196004 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 tccactccccaccccaag 31 |||||||||||||||||| Sbjct: 54441 tccactccccaccccaag 54424
>gb|AC104471.6| Homo sapiens 3 BAC RP11-80B17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160698 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 actccactccactcccca 24 |||||||||||||||||| Sbjct: 84210 actccactccactcccca 84193
>gb|AC093849.2| Homo sapiens BAC clone RP11-489G11 from 4, complete sequence Length = 156195 Score = 36.2 bits (18), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 11 cactccactccccaccccaaga 32 |||||| ||||||||||||||| Sbjct: 112017 cactcccctccccaccccaaga 111996
>gb|AC093154.2| Homo sapiens chromosome 1 clone RP3-445O10, complete sequence Length = 145658 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 tccactccccaccccaag 31 |||||||||||||||||| Sbjct: 1139 tccactccccaccccaag 1156
>gb|AC092803.2| Homo sapiens chromosome 1 clone RP11-61J19, complete sequence Length = 188345 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 cactccactccccacccc 28 |||||||||||||||||| Sbjct: 136560 cactccactccccacccc 136577
>ref|XM_940214.1| PREDICTED: Homo sapiens similar to ribosomal protein L10a (LOC137107), mRNA Length = 648 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 tccactccccaccccaag 31 |||||||||||||||||| Sbjct: 169 tccactccccaccccaag 186
>ref|XM_070233.3| PREDICTED: Homo sapiens similar to ribosomal protein L10a (LOC137107), mRNA Length = 648 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 tccactccccaccccaag 31 |||||||||||||||||| Sbjct: 169 tccactccccaccccaag 186
>gb|AC018347.17| Homo sapiens chromosome 15 clone RP11-410F2, complete sequence Length = 149399 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 cactccactccccacccc 28 |||||||||||||||||| Sbjct: 110876 cactccactccccacccc 110893
>gb|AC090993.5| Homo sapiens chromosome 8, clone RP1-84O15, complete sequence Length = 90623 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 tccactccccaccccaag 31 |||||||||||||||||| Sbjct: 63555 tccactccccaccccaag 63538
>gb|AC103582.17| Homo sapiens chromosome 22 clone ll22nc01-74c1 map 22q11, complete sequence Length = 48797 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 agtactccactccactcc 21 |||||||||||||||||| Sbjct: 48642 agtactccactccactcc 48659
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 36.2 bits (18), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 8 ctccactccactccccacccca 29 |||||||||||||||| ||||| Sbjct: 16516630 ctccactccactcccctcccca 16516609
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 actccactccactcccca 24 |||||||||||||||||| Sbjct: 17375723 actccactccactcccca 17375706
>gb|AC154290.1| Mus musculus BAC clone RP23-443K24 from chromosome 13, complete sequence Length = 193345 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 actccactccactcccca 24 |||||||||||||||||| Sbjct: 60119 actccactccactcccca 60102
>gb|AC005035.2| Homo sapiens BAC clone RP11-353P23 from 2, complete sequence Length = 193708 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 13 ctccactccccaccccaa 30 |||||||||||||||||| Sbjct: 56447 ctccactccccaccccaa 56430
>gb|AC007563.2| Homo sapiens BAC clone RP11-506C8 from 2, complete sequence Length = 179859 Score = 36.2 bits (18), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 7 actccactccactccccacccc 28 ||||||||| |||||||||||| Sbjct: 38624 actccactcaactccccacccc 38645
>gb|AF243527.1|AF243527 Homo sapiens serine protease gene cluster, complete sequence Length = 230000 Score = 36.2 bits (18), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 8 ctccactccactccccacccca 29 |||||| ||||||||||||||| Sbjct: 125996 ctccaccccactccccacccca 126017
>gb|AC064853.6| Homo sapiens BAC clone RP11-185H21 from 2, complete sequence Length = 137247 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 cactccactccccacccc 28 |||||||||||||||||| Sbjct: 78503 cactccactccccacccc 78486
>gb|AC019254.12| Homo sapiens chromosome 15, clone RP11-424I19, complete sequence Length = 179030 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 tccactccccaccccaag 31 |||||||||||||||||| Sbjct: 132087 tccactccccaccccaag 132104
>gb|AC011700.5|AC011700 Homo sapiens Chromosome 1 BAC RP11-478J18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154732 Score = 36.2 bits (18), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 15 ccactccccaccccaagaactc 36 |||| ||||||||||||||||| Sbjct: 31277 ccaccccccaccccaagaactc 31298
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 2 caagtactccactccact 19 |||||||||||||||||| Sbjct: 140271 caagtactccactccact 140288
>dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0579G08 Length = 164452 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 actccactccactcccca 24 |||||||||||||||||| Sbjct: 148406 actccactccactcccca 148389
>dbj|AP005523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0488B06 Length = 154764 Score = 36.2 bits (18), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 8 ctccactccactccccacccca 29 |||||||||||||||| ||||| Sbjct: 127286 ctccactccactcccctcccca 127265
>dbj|AK073298.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028F04, full insert sequence Length = 1533 Score = 36.2 bits (18), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 8 ctccactccactccccacccca 29 |||||||||||||||| ||||| Sbjct: 63 ctccactccactcccctcccca 84
>gb|AC133598.4| Mus musculus BAC clone RP24-374G16 from 13, complete sequence Length = 170544 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 tccactccccaccccaag 31 |||||||||||||||||| Sbjct: 68707 tccactccccaccccaag 68724
>gb|AC151978.3| Mus musculus BAC clone RP24-545C19 from 19, complete sequence Length = 163426 Score = 36.2 bits (18), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 7 actccactccactccccacccc 28 ||||||||||||||| |||||| Sbjct: 62299 actccactccactcctcacccc 62320
>dbj|AK060942.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-D03, full insert sequence Length = 862 Score = 36.2 bits (18), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 8 ctccactccactccccacccca 29 |||||||||||||||| ||||| Sbjct: 95 ctccactccactcccctcccca 116
>gb|AC174724.3| Mus musculus BAC clone RP23-101A6 from chromosome 15, complete sequence Length = 203823 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 cactccactccccacccc 28 |||||||||||||||||| Sbjct: 18587 cactccactccccacccc 18604
>gb|AC162300.3| Mus musculus chromosome 3, clone RP23-224F23, complete sequence Length = 162774 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 ccactccactccccaccc 27 |||||||||||||||||| Sbjct: 114755 ccactccactccccaccc 114738
>gb|AC170734.3| Sorex araneus clone SA_Ba-257D3, complete sequence Length = 122469 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 22 ccaccccaagaactccat 39 |||||||||||||||||| Sbjct: 79890 ccaccccaagaactccat 79907
>gb|BC107067.1| Homo sapiens MCF.2 cell line derived transforming sequence-like, mRNA (cDNA clone IMAGE:40007827), partial cds Length = 1883 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 ctccactccactccccac 25 |||||||||||||||||| Sbjct: 1335 ctccactccactccccac 1352
>gb|AC102272.20| Mus musculus chromosome 3, clone RP24-283P8, complete sequence Length = 161178 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccactccactccccaccc 27 |||||||||||||||||| Sbjct: 156287 ccactccactccccaccc 156304
>gb|AC140673.4| Mus musculus BAC clone RP23-325N1 from 15, complete sequence Length = 187392 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 cactccactccccacccc 28 |||||||||||||||||| Sbjct: 100102 cactccactccccacccc 100119
>gb|AC152412.2| Mus musculus BAC clone RP23-383B18 from 7, complete sequence Length = 196399 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 ctccactccactccccac 25 |||||||||||||||||| Sbjct: 173253 ctccactccactccccac 173270
>emb|CT010583.8| Mouse DNA sequence from clone RP23-203B24 on chromosome 16, complete sequence Length = 234878 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 actccactccccacccca 29 |||||||||||||||||| Sbjct: 171327 actccactccccacccca 171310
>gb|L14658.1|HUMFAH01 Human fumarylacetoacetate hydrolase (FAH) gene, intron 1, 5' end Length = 93 Score = 36.2 bits (18), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 7 actccactccactccccacccc 28 ||||||||||||||||| |||| Sbjct: 52 actccactccactcccctcccc 31
>dbj|AP003775.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-206H19, complete sequences Length = 179680 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 ccactccactccccaccc 27 |||||||||||||||||| Sbjct: 14996 ccactccactccccaccc 14979
>dbj|AB002360.1| Human mRNA for KIAA0362 gene, partial cds Length = 5391 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 ctccactccactccccac 25 |||||||||||||||||| Sbjct: 4686 ctccactccactccccac 4703
>dbj|AP000812.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-807H22, complete sequence Length = 120528 Score = 36.2 bits (18), Expect = 8.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 actccactccactcccca 24 |||||||||||||||||| Sbjct: 51409 actccactccactcccca 51392 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 504,192 Number of Sequences: 3902068 Number of extensions: 504192 Number of successful extensions: 44344 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44027 Number of HSP's gapped (non-prelim): 317 length of query: 59 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 38 effective length of database: 17,151,101,840 effective search space: 651741869920 effective search space used: 651741869920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)
