ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl47e09 |
|---|---|
| Clone Library Name | barley_pub |
>VPP3_HUMAN (Q13488) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 3 (V-ATPase 116-kDa isoform a3) (Osteoclastic proton pump 116 kDa subunit) (OC-116 kDa) (OC116) (T-cell immune regulator 1) (T cell immune response cDNA7 protein) (TIRC7) Length = 830 Score = 63.5 bits (153), Expect = 1e-10 Identities = 28/58 (48%), Positives = 42/58 (72%) Frame = +2 Query: 143 LMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNAD*SPFQRTYAVQIKRCAEM 316 + RSE + L+Q+ +PT +A+ VS LG+LGL++F+DLNA S FQR + V + RC E+ Sbjct: 4 MFRSEEVALVQLFLPTAAAYTCVSRLGELGLVEFRDLNASVSAFQRRFVVDVWRCEEL 61
>VPP1_MOUSE (Q9Z1G4) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 839 Score = 62.4 bits (150), Expect = 3e-10 Identities = 28/59 (47%), Positives = 42/59 (71%) Frame = +2 Query: 140 DLMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNAD*SPFQRTYAVQIKRCAEM 316 +L RSE M L Q+ + +E+A+ VS LG+LG +QF+DLN D + FQR + +++RC EM Sbjct: 3 ELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEM 61
>VPP1_BOVIN (Q29466) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 838 Score = 62.4 bits (150), Expect = 3e-10 Identities = 28/59 (47%), Positives = 42/59 (71%) Frame = +2 Query: 140 DLMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNAD*SPFQRTYAVQIKRCAEM 316 +L RSE M L Q+ + +E+A+ VS LG+LG +QF+DLN D + FQR + +++RC EM Sbjct: 3 ELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEM 61
>VPP1_PONPY (Q5R422) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) Length = 837 Score = 62.4 bits (150), Expect = 3e-10 Identities = 28/59 (47%), Positives = 42/59 (71%) Frame = +2 Query: 140 DLMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNAD*SPFQRTYAVQIKRCAEM 316 +L RSE M L Q+ + +E+A+ VS LG+LG +QF+DLN D + FQR + +++RC EM Sbjct: 3 ELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEM 61
>VPP1_HUMAN (Q93050) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 837 Score = 62.4 bits (150), Expect = 3e-10 Identities = 28/59 (47%), Positives = 42/59 (71%) Frame = +2 Query: 140 DLMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNAD*SPFQRTYAVQIKRCAEM 316 +L RSE M L Q+ + +E+A+ VS LG+LG +QF+DLN D + FQR + +++RC EM Sbjct: 3 ELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEM 61
>VPP1_CAEEL (P30628) Probable vacuolar proton translocating ATPase 116 kDa| subunit a (Uncoordinated protein 32) Length = 905 Score = 62.0 bits (149), Expect = 4e-10 Identities = 28/62 (45%), Positives = 43/62 (69%) Frame = +2 Query: 131 PSMDLMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNAD*SPFQRTYAVQIKRCA 310 P + RSE M L Q+ + +++++ V+ LG+LGL+QF+DLN D S FQR Y +++RC Sbjct: 12 PQPGIYRSEQMCLAQLYLQSDASYQCVAELGELGLVQFRDLNPDVSSFQRKYVNEVRRCD 71 Query: 311 EM 316 EM Sbjct: 72 EM 73
>VPP4_MOUSE (Q920R6) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 4 (V-ATPase 116-kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform) Length = 833 Score = 59.7 bits (143), Expect = 2e-09 Identities = 27/58 (46%), Positives = 41/58 (70%) Frame = +2 Query: 143 LMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNAD*SPFQRTYAVQIKRCAEM 316 + RSE M L QV + E+A+ V+ LG+LGL+QFKDLNA+ + FQR + +++RC + Sbjct: 4 VFRSEEMCLSQVFLQVEAAYCCVAELGELGLVQFKDLNANVNSFQRKFVNEVRRCESL 61
>VPP1_RAT (P25286) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase su Length = 838 Score = 59.3 bits (142), Expect = 2e-09 Identities = 27/59 (45%), Positives = 41/59 (69%) Frame = +2 Query: 140 DLMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNAD*SPFQRTYAVQIKRCAEM 316 +L RSE M L Q+ + +E+A+ VS L +LG +QF+DLN D + FQR + +++RC EM Sbjct: 3 ELFRSEEMTLAQLFLQSEAAYCCVSELEELGKVQFRDLNPDVNVFQRKFVNEVRRCEEM 61
>VPP4_HUMAN (Q9HBG4) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 4 (V-ATPase 116-kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform) Length = 840 Score = 56.6 bits (135), Expect = 2e-08 Identities = 25/58 (43%), Positives = 40/58 (68%) Frame = +2 Query: 143 LMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNAD*SPFQRTYAVQIKRCAEM 316 + RSE M L Q+ + E+A+ V+ LG+LGL+QFKDLN + + FQR + +++RC + Sbjct: 4 VFRSEEMCLSQLFLQVEAAYCCVAELGELGLVQFKDLNMNVNSFQRKFVNEVRRCESL 61
>VPP2_MOUSE (P15920) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7) Length = 856 Score = 55.8 bits (133), Expect = 3e-08 Identities = 26/58 (44%), Positives = 41/58 (70%) Frame = +2 Query: 143 LMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNAD*SPFQRTYAVQIKRCAEM 316 L RSE+M L Q+ + + +A+ +S LG+ GL+QF+DLN + S FQR + ++KRC E+ Sbjct: 4 LFRSESMCLAQLFLQSGTAYECLSALGEKGLVQFRDLNQNVSSFQRKFVGEVKRCEEL 61
>VPP2_HUMAN (Q9Y487) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 2 (V-ATPase 116-kDa isoform a2) (TJ6) Length = 856 Score = 55.5 bits (132), Expect = 3e-08 Identities = 26/58 (44%), Positives = 40/58 (68%) Frame = +2 Query: 143 LMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNAD*SPFQRTYAVQIKRCAEM 316 L RSE M L Q+ + + +A+ +S LG+ GL+QF+DLN + S FQR + ++KRC E+ Sbjct: 4 LFRSETMCLAQLFLQSGTAYECLSALGEKGLVQFRDLNQNVSSFQRKFVGEVKRCEEL 61
>VPP2_BOVIN (O97681) Vacuolar proton translocating ATPase 116 kDa subunit A| isoform 2 (V-ATPase 116-kDa isoform a2) Length = 854 Score = 53.9 bits (128), Expect = 1e-07 Identities = 25/58 (43%), Positives = 40/58 (68%) Frame = +2 Query: 143 LMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNAD*SPFQRTYAVQIKRCAEM 316 L RSE M L Q+ + + +A+ +S LG+ GL++F+DLN + S FQR + ++KRC E+ Sbjct: 4 LFRSETMCLAQLFLQSGTAYECLSVLGEKGLVEFRDLNQNVSSFQRKFVGEVKRCEEL 61
>VPH1_YEAST (P32563) Vacuolar ATP synthase subunit a, vacuolar isoform (EC| 3.6.3.14) (V-ATPase a subunit) (Vacuolar proton pump a subunit) (V-ATPase 95 kDa subunit) (Vacuolar pH protein 1) Length = 839 Score = 47.8 bits (112), Expect = 7e-06 Identities = 24/54 (44%), Positives = 34/54 (62%) Frame = +2 Query: 143 LMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNAD*SPFQRTYAVQIKR 304 + RS M L+Q IP E + + LG LGL+QF+DLN+ FQRT+ +I+R Sbjct: 7 IFRSAEMALVQFYIPQEISRDSAYTLGQLGLVQFRDLNSKVRAFQRTFVNEIRR 60
>VPH1_NEUCR (Q01290) Vacuolar ATP synthase 98 kDa subunit (Vacuolar ATPase 98| kDa subunit) Length = 856 Score = 44.3 bits (103), Expect = 8e-05 Identities = 21/52 (40%), Positives = 32/52 (61%) Frame = +2 Query: 149 RSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNAD*SPFQRTYAVQIKR 304 RS M ++Q+ I E + LG+LGL+ F+DLN++ S FQR + I+R Sbjct: 10 RSADMSMVQLYISNEIGREVCNALGELGLVHFRDLNSELSAFQRAFTQDIRR 61
>STV1_YEAST (P37296) Vacuolar ATP synthase subunit a, Golgi isoform (EC| 3.6.3.14) (V-ATPase 101 kDa subunit) (V-ATPase subunit AC115) (Similar to VPH1 protein 1) Length = 890 Score = 36.2 bits (82), Expect = 0.021 Identities = 20/58 (34%), Positives = 29/58 (50%) Frame = +2 Query: 143 LMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNAD*SPFQRTYAVQIKRCAEM 316 + RS M +Q+ IP E LG + + DLN D + FQR Y Q++R E+ Sbjct: 7 IFRSADMTYVQLYIPLEVIREVTFLLGKMSVFMVMDLNKDLTAFQRGYVNQLRRFDEV 64
>VPH1_SCHPO (O13742) Probable vacuolar ATP synthase 91 kDa subunit (Vacuolar| ATPase 91 kDa subunit) Length = 805 Score = 34.7 bits (78), Expect = 0.062 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = +2 Query: 209 VSHLGDLGLIQFKDLNAD*SPFQRTYAVQIKRCAE 313 +S LG+L I FKDLN D FQR++ +I+R + Sbjct: 1 MSALGELSTIHFKDLNPDVVAFQRSFVREIRRLTD 35
>FLCN_BOVIN (Q3B7L5) Folliculin| Length = 579 Score = 32.0 bits (71), Expect = 0.40 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Frame = -2 Query: 271 RALVCVEVFELDEAQIAEVGDGEVRGLGGDND---LQELHRLRPHQIHRGAAAPSAA 110 R L C EV Q A GDG RG D + +Q R+R H GA+A S++ Sbjct: 17 RTLFCTEVLHAPLPQGAGSGDGAGRGEPADEEEGGIQMSSRIRAHSPAEGASAESSS 73
>GEMI5_HUMAN (Q8TEQ6) Gem-associated protein 5 (Gemin5)| Length = 1508 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Frame = -3 Query: 231 PRSPRWETARCADSV--GI--MTCRSCIASDRIRSIEGQQP--PPLRAM 103 P SP W ARC+D+V G+ R+ + R+ G+ P PP R + Sbjct: 9 PPSPNWYCARCSDAVPGGLFGFAARTSVFLVRVGPGAGESPGTPPFRVI 57 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,203,445 Number of Sequences: 219361 Number of extensions: 435137 Number of successful extensions: 1470 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1452 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1469 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
