Clone Information

BLAST Search Result

Clone Name	bastl47e09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AK119298.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	184	1e-43
2	dbj\|AK101151.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	184	1e-43
3	ref\|NM_195204.1\| Oryza sativa (japonica cultivar-group) putative...	176	3e-41
4	gb\|AC093568.2\| Oryza sativa chromosome 10 clone OSJNBa0029P16, c...	165	1e-37
5	dbj\|AP008216.1\| Oryza sativa (japonica cultivar-group) genomic D...	165	1e-37
6	gb\|AE016959.3\| Oryza sativa (japonica cultivar-group) chromosome...	165	1e-37
7	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	149	6e-33
8	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	149	6e-33
9	gb\|AC134240.2\| Oryza sativa (japonica cultivar-group) chromosome...	149	6e-33
10	gb\|AC134235.2\| Oryza sativa (japonica cultivar-group) chromosome...	149	6e-33
11	ref\|NM_120068.3\| Arabidopsis thaliana ATPase AT4G39080 mRNA, com...	52	0.001
12	gb\|AY060557.1\| Arabidopsis thaliana AT4g39080/F19H22_180 mRNA, c...	52	0.001
13	gb\|BT002615.1\| Arabidopsis thaliana At4g39080/F19H22_180 mRNA, c...	52	0.001
14	ref\|NM_127713.3\| Arabidopsis thaliana ATPase AT2G21410 mRNA, com...	46	0.068
15	emb\|AJ580823.1\|LCO580823 Lotus corniculatus var. japonicus ORF1,...	46	0.068
16	gb\|AY124855.1\| Arabidopsis thaliana At2g21410/F3K23.17 mRNA, com...	46	0.068
17	gb\|AY099690.1\| Arabidopsis thaliana putative vacuolar proton-ATP...	46	0.068
18	gb\|AC006841.7\| Arabidopsis thaliana chromosome 2 clone F3K23 map...	46	0.068
19	gb\|AF424556.1\|AF424556 Arabidopsis thaliana At2g21410/F3K23.17 m...	46	0.068
20	gb\|AY053417.1\| Arabidopsis thaliana At2g21410/F3K23.17 mRNA, com...	46	0.068
21	dbj\|AP005666.1\| Lotus japonicus genomic DNA, chromosome 3, clone...	46	0.068
22	dbj\|AB092808.1\| Lotus japonicus gene for hypothetical proteins, ...	46	0.068
23	ref\|XM_518361.1\| PREDICTED: Pan troglodytes similar to Valyl-tRN...	42	1.1
24	gb\|AF134726.1\| Homo sapiens BAC clone 215O12 NG35, NG36, G9A, NG...	42	1.1
25	ref\|NM_006295.2\| Homo sapiens valyl-tRNA synthetase (VARS), mRNA	42	1.1
26	emb\|AL929592.8\| Human DNA sequence from clone DAQB-147D11 on chr...	42	1.1
27	emb\|AL671762.10\| Human DNA sequence from clone XXbac-254B15 on c...	42	1.1
28	emb\|AL662834.8\| Human DNA sequence from clone XXbac-40G17 on chr...	42	1.1
29	emb\|AL939108.1\|SCO939108 Streptomyces coelicolor A3(2) complete ...	42	1.1
30	emb\|AL591985.1\|RME591985 Sinorhizobium meliloti 1021 complete pSymB	42	1.1
31	emb\|CR925765.2\| Human DNA sequence from clone DADB-149K5 on chro...	42	1.1
32	emb\|CR759915.6\| Human DNA sequence from clone DAAP-21F2 on chrom...	42	1.1
33	emb\|CR759787.4\| Human DNA sequence from clone DAMC-117B11 on chr...	42	1.1
34	dbj\|BA000025.2\| Homo sapiens genomic DNA, chromosome 6p21.3, HLA...	42	1.1
35	emb\|AJ438978.1\|MCR438978 Mesembryanthemum crystallinum mRNA for ...	42	1.1
36	emb\|AL132713.11\|HSDJ71I17 Human DNA sequence from clone RP1-71I1...	42	1.1
37	gb\|AC158397.2\| Mus musculus BAC clone RP23-274H19 from chromosom...	40	4.2
38	ref\|XM_428696.1\| PREDICTED: Gallus gallus similar to DEAD (Asp-G...	40	4.2
39	ref\|XM_614019.2\| PREDICTED: Bos taurus similar to meteorin, glia...	40	4.2
40	emb\|Y18000.1\|HSAY18000 Homo sapiens NF2 gene	40	4.2
41	gb\|CP000283.1\| Rhodopseudomonas palustris BisB5, complete genome	40	4.2
42	emb\|BX640440.1\| Bordetella bronchiseptica strain RB50, complete ...	40	4.2
43	emb\|BX640426.1\| Bordetella parapertussis strain 12822, complete ...	40	4.2
44	emb\|AL161594.2\|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, ...	40	4.2
45	emb\|AL035679.1\|ATF19H22 Arabidopsis thaliana DNA chromosome 4, B...	40	4.2
46	gb\|AC004882.3\| Homo sapiens PAC clone RP1-76B20 from 22, complet...	40	4.2
47	gb\|AF043491.1\|AF043491 Oryctolagus cuniculus prostaglandin E2 re...	40	4.2
48	gb\|AC005529.7\| Homo sapiens chromosome 22 clone bk256d12 map 22q...	40	4.2
49	dbj\|BA000030.2\| Streptomyces avermitilis MA-4680 genomic DNA, co...	40	4.2
50	gb\|CP000157.1\| Erythrobacter litoralis HTCC2594, complete genome	40	4.2
51	ref\|XM_236613.3\| PREDICTED: Rattus norvegicus similar to hypothe...	40	4.2
52	gb\|CP000251.1\| Anaeromyxobacter dehalogenans 2CP-C, complete genome	40	4.2
53	emb\|X89531.1\|EV1VP2GEN Echovirus 1 DNA for 5'UTR and VP2 capsid ...	40	4.2
54	dbj\|AK065325.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	40	4.2
55	emb\|CR376852.17\| Zebrafish DNA sequence from clone CH211-181B18 ...	40	4.2
56	emb\|AL672182.18\| Mouse DNA sequence from clone RP23-293I3 on chr...	40	4.2

>dbj|AK119298.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-E09, full
           insert sequence
          Length = 3025

 Score =  184 bits (93), Expect = 1e-43
 Identities = 188/219 (85%), Gaps = 3/219 (1%)
 Strand = Plus / Plus

                                                                       
Query: 101 gccatggcgcgcagcggagggggc---tgctgcccctcgatggatctgatgcggtcggag 157
           |||||||||||| |||| || |||   ||||||||  |||||||||||||||||||||||
Sbjct: 192 gccatggcgcgcggcgggggcggcgggtgctgcccgccgatggatctgatgcggtcggag 251

                                                                       
Query: 158 gcgatgcagctcctgcaggtcattatccccaccgagtccgcgcacctcgccgtctcccac 217
           |||||||||||  |||||||||| |||||||| ||||| ||||||||| |||||||| ||
Sbjct: 252 gcgatgcagctggtgcaggtcatcatccccacggagtcggcgcacctcaccgtctcctac 311

                                                                       
Query: 218 ctcggcgatctgggcctcatccagttcaaagacctcaacgcagactaaagcccgtttcaa 277
           |||||||| || |||||| ||||||| |||||||| ||||||||| | || || ||||||
Sbjct: 312 ctcggcgaactcggcctcctccagttgaaagaccttaacgcagacaagagtccttttcaa 371

                                                  
Query: 278 cgcacctacgctgtacagatcaaaaggtgtgctgaaatg 316
           || || || ||||  ||||| |||||||||| |||||||
Sbjct: 372 cgaacatatgctgcccagataaaaaggtgtggtgaaatg 410

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>dbj|AK101151.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027C12, full
           insert sequence
          Length = 3018

 Score =  184 bits (93), Expect = 1e-43
 Identities = 188/219 (85%), Gaps = 3/219 (1%)
 Strand = Plus / Plus

                                                                       
Query: 101 gccatggcgcgcagcggagggggc---tgctgcccctcgatggatctgatgcggtcggag 157
           |||||||||||| |||| || |||   ||||||||  |||||||||||||||||||||||
Sbjct: 185 gccatggcgcgcggcgggggcggcgggtgctgcccgccgatggatctgatgcggtcggag 244

                                                                       
Query: 158 gcgatgcagctcctgcaggtcattatccccaccgagtccgcgcacctcgccgtctcccac 217
           |||||||||||  |||||||||| |||||||| ||||| ||||||||| |||||||| ||
Sbjct: 245 gcgatgcagctggtgcaggtcatcatccccacggagtcggcgcacctcaccgtctcctac 304

                                                                       
Query: 218 ctcggcgatctgggcctcatccagttcaaagacctcaacgcagactaaagcccgtttcaa 277
           |||||||| || |||||| ||||||| |||||||| ||||||||| | || || ||||||
Sbjct: 305 ctcggcgaactcggcctcctccagttgaaagaccttaacgcagacaagagtccttttcaa 364

                                                  
Query: 278 cgcacctacgctgtacagatcaaaaggtgtgctgaaatg 316
           || || || ||||  ||||| |||||||||| |||||||
Sbjct: 365 cgaacatatgctgcccagataaaaaggtgtggtgaaatg 403

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>ref|NM_195204.1| Oryza sativa (japonica cultivar-group) putative proton pump
           (OSJNBa0029P16.14), mRNA
          Length = 2352

 Score =  176 bits (89), Expect = 3e-41
 Identities = 179/209 (85%)
 Strand = Plus / Plus

                                                                       
Query: 108 cgcgcagcggagggggctgctgcccctcgatggatctgatgcggtcggaggcgatgcagc 167
           ||||| |||| || || |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5   cgcgcggcggcggcgggtgctgcccgtcgatggatctgatgcggtcggaggcgatgcagc 64

                                                                       
Query: 168 tcctgcaggtcattatccccaccgagtccgcgcacctcgccgtctcccacctcggcgatc 227
           |  |||||||||| |||||  | |||||||||||||||||||||||| |||||||||| |
Sbjct: 65  tggtgcaggtcatcatcccggcggagtccgcgcacctcgccgtctcctacctcggcgacc 124

                                                                       
Query: 228 tgggcctcatccagttcaaagacctcaacgcagactaaagcccgtttcaacgcacctacg 287
           | |||||| |||||||||||||||| || || ||| ||||||| || || || || || |
Sbjct: 125 tcggcctcctccagttcaaagaccttaatgccgacaaaagcccattccagcggacttatg 184

                                        
Query: 288 ctgtacagatcaaaaggtgtgctgaaatg 316
           ||   |||||||| ||||||| |||||||
Sbjct: 185 cttcccagatcaagaggtgtggtgaaatg 213

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>gb|AC093568.2| Oryza sativa chromosome 10 clone OSJNBa0029P16, complete sequence
          Length = 173644

 Score =  165 bits (83), Expect = 1e-37
 Identities = 128/143 (89%)
 Strand = Plus / Minus

                                                                          
Query: 108    cgcgcagcggagggggctgctgcccctcgatggatctgatgcggtcggaggcgatgcagc 167
              ||||| |||| || || |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 112066 cgcgcggcggcggcgggtgctgcccgtcgatggatctgatgcggtcggaggcgatgcagc 112007

                                                                          
Query: 168    tcctgcaggtcattatccccaccgagtccgcgcacctcgccgtctcccacctcggcgatc 227
              |  |||||||||| |||||  | |||||||||||||||||||||||| |||||||||| |
Sbjct: 112006 tggtgcaggtcatcatcccggcggagtccgcgcacctcgccgtctcctacctcggcgacc 111947

                                     
Query: 228    tgggcctcatccagttcaaagac 250
              | |||||| ||||||||||||||
Sbjct: 111946 tcggcctcctccagttcaaagac 111924

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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score =  165 bits (83), Expect = 1e-37
 Identities = 128/143 (89%)
 Strand = Plus / Plus

                                                                           
Query: 108     cgcgcagcggagggggctgctgcccctcgatggatctgatgcggtcggaggcgatgcagc 167
               ||||| |||| || || |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5431582 cgcgcggcggcggcgggtgctgcccgtcgatggatctgatgcggtcggaggcgatgcagc 5431641

                                                                           
Query: 168     tcctgcaggtcattatccccaccgagtccgcgcacctcgccgtctcccacctcggcgatc 227
               |  |||||||||| |||||  | |||||||||||||||||||||||| |||||||||| |
Sbjct: 5431642 tggtgcaggtcatcatcccggcggagtccgcgcacctcgccgtctcctacctcggcgacc 5431701

                                      
Query: 228     tgggcctcatccagttcaaagac 250
               | |||||| ||||||||||||||
Sbjct: 5431702 tcggcctcctccagttcaaagac 5431724

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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  165 bits (83), Expect = 1e-37
 Identities = 128/143 (89%)
 Strand = Plus / Plus

                                                                           
Query: 108     cgcgcagcggagggggctgctgcccctcgatggatctgatgcggtcggaggcgatgcagc 167
               ||||| |||| || || |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5432369 cgcgcggcggcggcgggtgctgcccgtcgatggatctgatgcggtcggaggcgatgcagc 5432428

                                                                           
Query: 168     tcctgcaggtcattatccccaccgagtccgcgcacctcgccgtctcccacctcggcgatc 227
               |  |||||||||| |||||  | |||||||||||||||||||||||| |||||||||| |
Sbjct: 5432429 tggtgcaggtcatcatcccggcggagtccgcgcacctcgccgtctcctacctcggcgacc 5432488

                                      
Query: 228     tgggcctcatccagttcaaagac 250
               | |||||| ||||||||||||||
Sbjct: 5432489 tcggcctcctccagttcaaagac 5432511

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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  149 bits (75), Expect = 6e-33
 Identities = 134/153 (87%), Gaps = 3/153 (1%)
 Strand = Plus / Plus

                                                                           
Query: 101     gccatggcgcgcagcggagggggc---tgctgcccctcgatggatctgatgcggtcggag 157
               |||||||||||| |||| || |||   ||||||||  |||||||||||||||||||||||
Sbjct: 7953522 gccatggcgcgcggcgggggcggcgggtgctgcccgccgatggatctgatgcggtcggag 7953581

                                                                           
Query: 158     gcgatgcagctcctgcaggtcattatccccaccgagtccgcgcacctcgccgtctcccac 217
               |||||||||||  |||||||||| |||||||| ||||| ||||||||| |||||||| ||
Sbjct: 7953582 gcgatgcagctggtgcaggtcatcatccccacggagtcggcgcacctcaccgtctcctac 7953641

                                                
Query: 218     ctcggcgatctgggcctcatccagttcaaagac 250
               |||||||| || |||||| ||||||| ||||||
Sbjct: 7953642 ctcggcgaactcggcctcctccagttgaaagac 7953674

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  149 bits (75), Expect = 6e-33
 Identities = 134/153 (87%), Gaps = 3/153 (1%)
 Strand = Plus / Plus

                                                                           
Query: 101     gccatggcgcgcagcggagggggc---tgctgcccctcgatggatctgatgcggtcggag 157
               |||||||||||| |||| || |||   ||||||||  |||||||||||||||||||||||
Sbjct: 7951357 gccatggcgcgcggcgggggcggcgggtgctgcccgccgatggatctgatgcggtcggag 7951416

                                                                           
Query: 158     gcgatgcagctcctgcaggtcattatccccaccgagtccgcgcacctcgccgtctcccac 217
               |||||||||||  |||||||||| |||||||| ||||| ||||||||| |||||||| ||
Sbjct: 7951417 gcgatgcagctggtgcaggtcatcatccccacggagtcggcgcacctcaccgtctcctac 7951476

                                                
Query: 218     ctcggcgatctgggcctcatccagttcaaagac 250
               |||||||| || |||||| ||||||| ||||||
Sbjct: 7951477 ctcggcgaactcggcctcctccagttgaaagac 7951509

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>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0081I10, complete sequence
          Length = 143298

 Score =  149 bits (75), Expect = 6e-33
 Identities = 134/153 (87%), Gaps = 3/153 (1%)
 Strand = Plus / Plus

                                                                         
Query: 101   gccatggcgcgcagcggagggggc---tgctgcccctcgatggatctgatgcggtcggag 157
             |||||||||||| |||| || |||   ||||||||  |||||||||||||||||||||||
Sbjct: 20885 gccatggcgcgcggcgggggcggcgggtgctgcccgccgatggatctgatgcggtcggag 20944

                                                                         
Query: 158   gcgatgcagctcctgcaggtcattatccccaccgagtccgcgcacctcgccgtctcccac 217
             |||||||||||  |||||||||| |||||||| ||||| ||||||||| |||||||| ||
Sbjct: 20945 gcgatgcagctggtgcaggtcatcatccccacggagtcggcgcacctcaccgtctcctac 21004

                                              
Query: 218   ctcggcgatctgggcctcatccagttcaaagac 250
             |||||||| || |||||| ||||||| ||||||
Sbjct: 21005 ctcggcgaactcggcctcctccagttgaaagac 21037

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>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030J04,
              complete sequence
          Length = 153431

 Score =  149 bits (75), Expect = 6e-33
 Identities = 134/153 (87%), Gaps = 3/153 (1%)
 Strand = Plus / Plus

                                                                          
Query: 101    gccatggcgcgcagcggagggggc---tgctgcccctcgatggatctgatgcggtcggag 157
              |||||||||||| |||| || |||   ||||||||  |||||||||||||||||||||||
Sbjct: 139120 gccatggcgcgcggcgggggcggcgggtgctgcccgccgatggatctgatgcggtcggag 139179

                                                                          
Query: 158    gcgatgcagctcctgcaggtcattatccccaccgagtccgcgcacctcgccgtctcccac 217
              |||||||||||  |||||||||| |||||||| ||||| ||||||||| |||||||| ||
Sbjct: 139180 gcgatgcagctggtgcaggtcatcatccccacggagtcggcgcacctcaccgtctcctac 139239

                                               
Query: 218    ctcggcgatctgggcctcatccagttcaaagac 250
              |||||||| || |||||| ||||||| ||||||
Sbjct: 139240 ctcggcgaactcggcctcctccagttgaaagac 139272

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>ref|NM_120068.3| Arabidopsis thaliana ATPase AT4G39080 mRNA, complete cds
          Length = 4147

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 137/174 (78%)
 Strand = Plus / Plus

                                                                       
Query: 135 cgatggatctgatgcggtcggaggcgatgcagctcctgcaggtcattatccccaccgagt 194
           |||||||||||||||| || ||| ||||||| ||  | ||| ||||| | ||||  || |
Sbjct: 122 cgatggatctgatgcgttcagagacgatgcaacttgttcagctcattgttcccatggaat 181

                                                                       
Query: 195 ccgcgcacctcgccgtctcccacctcggcgatctgggcctcatccagttcaaagacctca 254
           | || || ||| |||||||  |||| || ||||| |||||| |||| ||||||||||| |
Sbjct: 182 ctgctcatctcaccgtctcttaccttggagatcttggcctcgtccaattcaaagacctta 241

                                                                 
Query: 255 acgcagactaaagcccgtttcaacgcacctacgctgtacagatcaaaaggtgtg 308
           |  ||||  | ||||| |||||||| || ||||| | |||||| ||||| ||||
Sbjct: 242 attcagagaagagcccatttcaacgtacttacgcagcacagattaaaagatgtg 295

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>gb|AY060557.1| Arabidopsis thaliana AT4g39080/F19H22_180 mRNA, complete cds
          Length = 2819

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 137/174 (78%)
 Strand = Plus / Plus

                                                                       
Query: 135 cgatggatctgatgcggtcggaggcgatgcagctcctgcaggtcattatccccaccgagt 194
           |||||||||||||||| || ||| ||||||| ||  | ||| ||||| | ||||  || |
Sbjct: 113 cgatggatctgatgcgttcagagacgatgcaacttgttcagctcattgttcccatggaat 172

                                                                       
Query: 195 ccgcgcacctcgccgtctcccacctcggcgatctgggcctcatccagttcaaagacctca 254
           | || || ||| |||||||  |||| || ||||| |||||| |||| ||||||||||| |
Sbjct: 173 ctgctcatctcaccgtctcttaccttggagatcttggcctcgtccaattcaaagacctta 232

                                                                 
Query: 255 acgcagactaaagcccgtttcaacgcacctacgctgtacagatcaaaaggtgtg 308
           |  ||||  | ||||| |||||||| || ||||| | |||||| ||||| ||||
Sbjct: 233 attcagagaagagcccatttcaacgtacttacgcagcacagattaaaagatgtg 286

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>gb|BT002615.1| Arabidopsis thaliana At4g39080/F19H22_180 mRNA, complete cds
          Length = 2466

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 137/174 (78%)
 Strand = Plus / Plus

                                                                       
Query: 135 cgatggatctgatgcggtcggaggcgatgcagctcctgcaggtcattatccccaccgagt 194
           |||||||||||||||| || ||| ||||||| ||  | ||| ||||| | ||||  || |
Sbjct: 38  cgatggatctgatgcgttcagagacgatgcaacttgttcagctcattgttcccatggaat 97

                                                                       
Query: 195 ccgcgcacctcgccgtctcccacctcggcgatctgggcctcatccagttcaaagacctca 254
           | || || ||| |||||||  |||| || ||||| |||||| |||| ||||||||||| |
Sbjct: 98  ctgctcatctcaccgtctcttaccttggagatcttggcctcgtccaattcaaagacctta 157

                                                                 
Query: 255 acgcagactaaagcccgtttcaacgcacctacgctgtacagatcaaaaggtgtg 308
           |  ||||  | ||||| |||||||| || ||||| | |||||| ||||| ||||
Sbjct: 158 attcagagaagagcccatttcaacgtacttacgcagcacagattaaaagatgtg 211

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>ref|NM_127713.3| Arabidopsis thaliana ATPase AT2G21410 mRNA, complete cds
          Length = 2860

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 92/115 (80%)
 Strand = Plus / Plus

                                                                       
Query: 135 cgatggatctgatgcggtcggaggcgatgcagctcctgcaggtcattatccccaccgagt 194
           ||||||||||||||||||| ||  ||||||| ||| | || |||||| | ||||  || |
Sbjct: 124 cgatggatctgatgcggtcagaaccgatgcaactcgttcaagtcattgttcccatggaat 183

                                                                  
Query: 195 ccgcgcacctcgccgtctcccacctcggcgatctgggcctcatccagttcaaaga 249
           | || || ||  |||||||  | ||||||||||| || ||| |||||||||||||
Sbjct: 184 ctgctcatcttaccgtctcttatctcggcgatctcggtctcgtccagttcaaaga 238

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>emb|AJ580823.1|LCO580823 Lotus corniculatus var. japonicus ORF1, ORF2, ORF3 and genes for
             vacuolar proton-ATPase subunit-like protein, papain-like
             cysteine proteinase-like protein 1 and papain-like
             cysteine proteinase-like protein 2
          Length = 46563

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 92/115 (80%)
 Strand = Plus / Plus

                                                                         
Query: 135   cgatggatctgatgcggtcggaggcgatgcagctcctgcaggtcattatccccaccgagt 194
             ||||||||||| | || || ||| ||||||| ||| | ||  |||| ||||||| ||| |
Sbjct: 13091 cgatggatctgttccgttccgagccgatgcaactcgttcaactcatcatccccatcgaat 13150

                                                                    
Query: 195   ccgcgcacctcgccgtctcccacctcggcgatctgggcctcatccagttcaaaga 249
             | || |||| | | |||||| |||||||||| || |||||| | |||||||||||
Sbjct: 13151 ctgctcaccgcactgtctcctacctcggcgaccttggcctccttcagttcaaaga 13205

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>gb|AY124855.1| Arabidopsis thaliana At2g21410/F3K23.17 mRNA, complete cds
          Length = 2466

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 92/115 (80%)
 Strand = Plus / Plus

                                                                       
Query: 135 cgatggatctgatgcggtcggaggcgatgcagctcctgcaggtcattatccccaccgagt 194
           ||||||||||||||||||| ||  ||||||| ||| | || |||||| | ||||  || |
Sbjct: 41  cgatggatctgatgcggtcagaaccgatgcaactcgttcaagtcattgttcccatggaat 100

                                                                  
Query: 195 ccgcgcacctcgccgtctcccacctcggcgatctgggcctcatccagttcaaaga 249
           | || || ||  |||||||  | ||||||||||| || ||| |||||||||||||
Sbjct: 101 ctgctcatcttaccgtctcttatctcggcgatctcggtctcgtccagttcaaaga 155

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>gb|AY099690.1| Arabidopsis thaliana putative vacuolar proton-ATPase subunit
           (At2g21410) mRNA, complete cds
          Length = 2667

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 92/115 (80%)
 Strand = Plus / Plus

                                                                       
Query: 135 cgatggatctgatgcggtcggaggcgatgcagctcctgcaggtcattatccccaccgagt 194
           ||||||||||||||||||| ||  ||||||| ||| | || |||||| | ||||  || |
Sbjct: 120 cgatggatctgatgcggtcagaaccgatgcaactcgttcaagtcattgttcccatggaat 179

                                                                  
Query: 195 ccgcgcacctcgccgtctcccacctcggcgatctgggcctcatccagttcaaaga 249
           | || || ||  |||||||  | ||||||||||| || ||| |||||||||||||
Sbjct: 180 ctgctcatcttaccgtctcttatctcggcgatctcggtctcgtccagttcaaaga 234

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>gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map mi148, complete
             sequence
          Length = 125045

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 92/115 (80%)
 Strand = Plus / Plus

                                                                         
Query: 135   cgatggatctgatgcggtcggaggcgatgcagctcctgcaggtcattatccccaccgagt 194
             ||||||||||||||||||| ||  ||||||| ||| | || |||||| | ||||  || |
Sbjct: 59782 cgatggatctgatgcggtcagaaccgatgcaactcgttcaagtcattgttcccatggaat 59841

                                                                    
Query: 195   ccgcgcacctcgccgtctcccacctcggcgatctgggcctcatccagttcaaaga 249
             | || || ||  |||||||  | ||||||||||| || ||| |||||||||||||
Sbjct: 59842 ctgctcatcttaccgtctcttatctcggcgatctcggtctcgtccagttcaaaga 59896

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>gb|AF424556.1|AF424556 Arabidopsis thaliana At2g21410/F3K23.17 mRNA, complete cds
          Length = 2631

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 92/115 (80%)
 Strand = Plus / Plus

                                                                       
Query: 135 cgatggatctgatgcggtcggaggcgatgcagctcctgcaggtcattatccccaccgagt 194
           ||||||||||||||||||| ||  ||||||| ||| | || |||||| | ||||  || |
Sbjct: 77  cgatggatctgatgcggtcagaaccgatgcaactcgttcaagtcattgttcccatggaat 136

                                                                  
Query: 195 ccgcgcacctcgccgtctcccacctcggcgatctgggcctcatccagttcaaaga 249
           | || || ||  |||||||  | ||||||||||| || ||| |||||||||||||
Sbjct: 137 ctgctcatcttaccgtctcttatctcggcgatctcggtctcgtccagttcaaaga 191

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>gb|AY053417.1| Arabidopsis thaliana At2g21410/F3K23.17 mRNA, complete cds
          Length = 2852

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 92/115 (80%)
 Strand = Plus / Plus

                                                                       
Query: 135 cgatggatctgatgcggtcggaggcgatgcagctcctgcaggtcattatccccaccgagt 194
           ||||||||||||||||||| ||  ||||||| ||| | || |||||| | ||||  || |
Sbjct: 116 cgatggatctgatgcggtcagaaccgatgcaactcgttcaagtcattgttcccatggaat 175

                                                                  
Query: 195 ccgcgcacctcgccgtctcccacctcggcgatctgggcctcatccagttcaaaga 249
           | || || ||  |||||||  | ||||||||||| || ||| |||||||||||||
Sbjct: 176 ctgctcatcttaccgtctcttatctcggcgatctcggtctcgtccagttcaaaga 230

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>dbj|AP005666.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09E01, TM0258b,
             complete sequence
          Length = 46491

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 92/115 (80%)
 Strand = Plus / Plus

                                                                         
Query: 135   cgatggatctgatgcggtcggaggcgatgcagctcctgcaggtcattatccccaccgagt 194
             ||||||||||| | || || ||| ||||||| ||| | ||  |||| ||||||| ||| |
Sbjct: 13157 cgatggatctgttccgttccgagccgatgcaactcgttcaactcatcatccccatcgaat 13216

                                                                    
Query: 195   ccgcgcacctcgccgtctcccacctcggcgatctgggcctcatccagttcaaaga 249
             | || |||| | | |||||| |||||||||| || |||||| | |||||||||||
Sbjct: 13217 ctgctcaccgcactgtctcctacctcggcgaccttggcctccttcagttcaaaga 13271

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>dbj|AB092808.1| Lotus japonicus gene for hypothetical proteins, complete and
           partial cds, clone:BAC259.12D-1
          Length = 32644

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 92/115 (80%)
 Strand = Plus / Plus

                                                                       
Query: 135 cgatggatctgatgcggtcggaggcgatgcagctcctgcaggtcattatccccaccgagt 194
           ||||||||||| | || || ||| ||||||| ||| | ||  |||| ||||||| ||| |
Sbjct: 267 cgatggatctgttccgttccgagccgatgcaactcgttcaactcatcatccccatcgaat 326

                                                                  
Query: 195 ccgcgcacctcgccgtctcccacctcggcgatctgggcctcatccagttcaaaga 249
           | || |||| | | |||||| |||||||||| || |||||| | |||||||||||
Sbjct: 327 ctgctcaccgcactgtctcctacctcggcgaccttggcctccttcagttcaaaga 381

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>ref|XM_518361.1| PREDICTED: Pan troglodytes similar to Valyl-tRNA synthetase 2
          (LOC462568), mRNA
          Length = 2136

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 18 ggggccgcgctgctcgccgcccgcc 42
          |||||||||| ||||||||||||||
Sbjct: 76 ggggccgcgcggctcgccgcccgcc 52

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>gb|AF134726.1| Homo sapiens BAC clone 215O12 NG35, NG36, G9A, NG22, G9, HSP70-2,
              HSP70-1, HSP70-HOM, snRNP, G7A, NG37, NG23, and MutSH5
              genes, complete cds
          Length = 180283

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 18     ggggccgcgctgctcgccgcccgcc 42
              |||||||||| ||||||||||||||
Sbjct: 122352 ggggccgcgcggctcgccgcccgcc 122328

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>ref|NM_006295.2| Homo sapiens valyl-tRNA synthetase (VARS), mRNA
          Length = 4308

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 18  ggggccgcgctgctcgccgcccgcc 42
           |||||||||| ||||||||||||||
Sbjct: 115 ggggccgcgcggctcgccgcccgcc 91

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>emb|AL929592.8| Human DNA sequence from clone DAQB-147D11 on chromosome 6 Contains
            the 5' end of the VARS2 gene for valyl-tRNA synthetase 2,
            the LSM2 gene for the LSM2 homolog, U6 small nuclear RNA
            associated (S. cerevisiae) factor, the HSPA1L gene for
            the heat shock 10kDa protein 1-like factor, the HSPA1A
            gene for the heat shock 70kDa protein 1A, the HSPA1B gene
            for the heat shock 70kDa protein 1B, the C6orf48 gene for
            chromosome 6 open reading frame 48, and 4 CpG islands,
            complete sequence
          Length = 59836

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 18   ggggccgcgctgctcgccgcccgcc 42
            |||||||||| ||||||||||||||
Sbjct: 7637 ggggccgcgcggctcgccgcccgcc 7661

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>emb|AL671762.10| Human DNA sequence from clone XXbac-254B15 on chromosome 6 contains
            the 5' end of the VARS2 gene for valyl-tRNA synthetase 2,
            the gene for  chromosome 6 open reading frame 28, the
            HSPA1L gene for heat shock 70kDa protein 1-like, the
            HSPA1A gene for heat shock 70kDa protein 1A, the HSPA1B
            gene for heat shock 70kDa protein 1B, the gene for
            chromosome 6 open reading frame 48, the NEU1 gene for
            sialidase 1 (lysosomal sialidase), the gene forchromosome
            6 open reading frame 29, the gene for  HLA-B associated
            transcript 8, the gene for chromosome 6 open reading
            frame 46 and eight CpG islands, complete sequence
          Length = 113582

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 18   ggggccgcgctgctcgccgcccgcc 42
            |||||||||| ||||||||||||||
Sbjct: 3669 ggggccgcgcggctcgccgcccgcc 3693

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>emb|AL662834.8| Human DNA sequence from clone XXbac-40G17 on chromosome 6 contains the
             MSH5 gene for mutS homolog 5 (e. coli), the gene for NG23
             protein, the gene for chromosome 6 open reading frame 27,
             the VARS2 gene for valyl-tRNA synthetase 2, the gene for
             chromosome 6 open reading frame 28, the HSPA1L gene for
             heat shock 70kDa protein 1-like, the HSPA1A gene for heat
             shock 70kDa protein 1A, the HSPA1B gene for heat shock
             70kDa protein 1B, the gene for chromosome 6 open reading
             frame 48, the NEU1 gene for sialidase 1 (lysosomal
             sialidase), the gene for chromosome 6 open reading frame
             29, the BAT8 gene for HLA-B associated transcript 8, the
             gene for chromosome 6 open reading frame 46 and nine CpG
             islands, complete sequence
          Length = 179894

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 18    ggggccgcgctgctcgccgcccgcc 42
             |||||||||| ||||||||||||||
Sbjct: 59695 ggggccgcgcggctcgccgcccgcc 59719

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>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29
          Length = 339650

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 85     cgccgcgggcctgcacgccat 105
              |||||||||||||||||||||
Sbjct: 158710 cgccgcgggcctgcacgccat 158730

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>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 23     cgcgctgctcgccgcccgcccatcc 47
              |||| ||||||||||||||||||||
Sbjct: 938592 cgcgttgctcgccgcccgcccatcc 938616

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>emb|CR925765.2| Human DNA sequence from clone DADB-149K5 on chromosome 6, complete
             sequence
          Length = 57997

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 18    ggggccgcgctgctcgccgcccgcc 42
             |||||||||| ||||||||||||||
Sbjct: 44898 ggggccgcgcggctcgccgcccgcc 44922

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>emb|CR759915.6| Human DNA sequence from clone DAAP-21F2 on chromosome 6, complete
             sequence
          Length = 85491

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 18    ggggccgcgctgctcgccgcccgcc 42
             |||||||||| ||||||||||||||
Sbjct: 40866 ggggccgcgcggctcgccgcccgcc 40890

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>emb|CR759787.4| Human DNA sequence from clone DAMC-117B11 on chromosome 6, complete
              sequence
          Length = 113650

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 18     ggggccgcgctgctcgccgcccgcc 42
              |||||||||| ||||||||||||||
Sbjct: 102447 ggggccgcgcggctcgccgcccgcc 102471

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>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region
          Length = 2229817

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 18     ggggccgcgctgctcgccgcccgcc 42
              |||||||||| ||||||||||||||
Sbjct: 148199 ggggccgcgcggctcgccgcccgcc 148175

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>emb|AJ438978.1|MCR438978 Mesembryanthemum crystallinum mRNA for putative vacuolar ATPase
           subunit 100 kDa subunit (vpha-a gene)
          Length = 2783

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 137 atggatctgatgcggtcggaggcgatgca 165
           |||||||||||||| |||||| |||||||
Sbjct: 101 atggatctgatgcgatcggagccgatgca 129

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>emb|AL132713.11|HSDJ71I17 Human DNA sequence from clone RP1-71I17 on chromosome 6p21.2-22.1,
             complete sequence
          Length = 163682

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 18    ggggccgcgctgctcgccgcccgcc 42
             |||||||||| ||||||||||||||
Sbjct: 15914 ggggccgcgcggctcgccgcccgcc 15890

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>gb|AC158397.2| Mus musculus BAC clone RP23-274H19 from chromosome 16, complete sequence
          Length = 197843

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 16     tcggggccgcgctgctcgccgccc 39
              |||||||||||| |||||||||||
Sbjct: 109278 tcggggccgcgccgctcgccgccc 109301

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>ref|XM_428696.1| PREDICTED: Gallus gallus similar to DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 41 (LOC431146), partial mRNA
          Length = 484

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 22  ccgcgctgctcgccgcccgc 41
           ||||||||||||||||||||
Sbjct: 129 ccgcgctgctcgccgcccgc 110

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>ref|XM_614019.2| PREDICTED: Bos taurus similar to meteorin, glial cell differentiation
            regulator-like (LOC534297), mRNA
          Length = 2750

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   gccgcccgcccatccccgcc 52
            ||||||||||||||||||||
Sbjct: 1200 gccgcccgcccatccccgcc 1181

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>emb|Y18000.1|HSAY18000 Homo sapiens NF2 gene
          Length = 126138

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     ccgcgctgctcgccgcccgc 41
              ||||||||||||||||||||
Sbjct: 124587 ccgcgctgctcgccgcccgc 124568

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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 21      gccgcgctgctcgccgcccg 40
               ||||||||||||||||||||
Sbjct: 1159852 gccgcgctgctcgccgcccg 1159833

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>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 92     ggcctgcacgccatggcgcgcagc 115
              ||||||||||| ||||||||||||
Sbjct: 268779 ggcctgcacgcgatggcgcgcagc 268802

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>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14
          Length = 348866

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 92    ggcctgcacgccatggcgcgcagc 115
             ||||||||||| ||||||||||||
Sbjct: 34454 ggcctgcacgcgatggcgcgcagc 34477

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>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90
          Length = 198987

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 92/116 (79%)
 Strand = Plus / Plus

                                                                          
Query: 135    cgatggatctgatgcggtcggaggcgatgcagctcctgcaggtcattatccccaccgagt 194
              |||||||||||||||| || ||| ||||||| ||  | ||| ||||| | ||||  || |
Sbjct: 123705 cgatggatctgatgcgttcagagacgatgcaacttgttcagctcattgttcccatggaat 123764

                                                                      
Query: 195    ccgcgcacctcgccgtctcccacctcggcgatctgggcctcatccagttcaaagac 250
              | || || ||| |||||||  |||| || ||||| |||||| |||| |||||||||
Sbjct: 123765 ctgctcatctcaccgtctcttaccttggagatcttggcctcgtccaattcaaagac 123820

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>emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, BAC clone F19H22 (ESSA project)
          Length = 100469

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 92/116 (79%)
 Strand = Plus / Plus

                                                                         
Query: 135   cgatggatctgatgcggtcggaggcgatgcagctcctgcaggtcattatccccaccgagt 194
             |||||||||||||||| || ||| ||||||| ||  | ||| ||||| | ||||  || |
Sbjct: 85695 cgatggatctgatgcgttcagagacgatgcaacttgttcagctcattgttcccatggaat 85754

                                                                     
Query: 195   ccgcgcacctcgccgtctcccacctcggcgatctgggcctcatccagttcaaagac 250
             | || || ||| |||||||  |||| || ||||| |||||| |||| |||||||||
Sbjct: 85755 ctgctcatctcaccgtctcttaccttggagatcttggcctcgtccaattcaaagac 85810

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>gb|AC004882.3| Homo sapiens PAC clone RP1-76B20 from 22, complete sequence
          Length = 171682

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    ccgcgctgctcgccgcccgc 41
             ||||||||||||||||||||
Sbjct: 66710 ccgcgctgctcgccgcccgc 66691

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>gb|AF043491.1|AF043491 Oryctolagus cuniculus prostaglandin E2 receptor subtype EP1 mRNA,
          partial cds
          Length = 781

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 20 ggccgcgctgctcgccgccc 39
          ||||||||||||||||||||
Sbjct: 67 ggccgcgctgctcgccgccc 86

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>gb|AC005529.7| Homo sapiens chromosome 22 clone bk256d12 map 22q12, complete sequence
          Length = 318488

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     ccgcgctgctcgccgcccgc 41
              ||||||||||||||||||||
Sbjct: 247967 ccgcgctgctcgccgcccgc 247948

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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 15      atcggggccgcgctgctcgccgcc 38
               |||||| |||||||||||||||||
Sbjct: 8444514 atcgggtccgcgctgctcgccgcc 8444491

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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 20      ggccgcgctgctcgccgccc 39
               ||||||||||||||||||||
Sbjct: 2006866 ggccgcgctgctcgccgccc 2006885

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>ref|XM_236613.3| PREDICTED: Rattus norvegicus similar to hypothetical protein
           (predicted) (LOC315988), mRNA
          Length = 2628

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 24  gcgctgctcgccgcccgccc 43
           ||||||||||||||||||||
Sbjct: 115 gcgctgctcgccgcccgccc 96

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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 19      gggccgcgctgctcgccgcc 38
               ||||||||||||||||||||
Sbjct: 4225959 gggccgcgctgctcgccgcc 4225940

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>emb|X89531.1|EV1VP2GEN Echovirus 1 DNA for 5'UTR and VP2 capsid protein gene
          Length = 1412

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   cgcgggcctgcacgccatgg 107
            ||||||||||||||||||||
Sbjct: 1137 cgcgggcctgcacgccatgg 1118

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>dbj|AK065325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002P24, full
           insert sequence
          Length = 1596

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 204 tcgccgtctcccacctcggc 223
           ||||||||||||||||||||
Sbjct: 200 tcgccgtctcccacctcggc 181

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>emb|CR376852.17| Zebrafish DNA sequence from clone CH211-181B18 in linkage group 21,
             complete sequence
          Length = 157717

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 259   agactaaagcccgtttcaac 278
             ||||||||||||||||||||
Sbjct: 94929 agactaaagcccgtttcaac 94910

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>emb|AL672182.18| Mouse DNA sequence from clone RP23-293I3 on chromosome 11, complete
              sequence
          Length = 211363

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 294    agatcaaaaggtgtgctgaaatgt 317
              |||||||||| |||||||||||||
Sbjct: 107154 agatcaaaagttgtgctgaaatgt 107131


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,904,023
Number of Sequences: 3902068
Number of extensions: 1904023
Number of successful extensions: 43419
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 42598
Number of HSP's gapped (non-prelim): 820
length of query: 320
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 298
effective length of database: 17,147,199,772
effective search space: 5109865532056
effective search space used: 5109865532056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result