>ref|XM_466650.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3202

 Score =  301 bits (152), Expect = 9e-79
 Identities = 236/264 (89%)
 Strand = Plus / Plus

                                                                       
Query: 122 gaatccccgccgcccccggcgccgcgacctcaacgcactggatccgtatttagaggagtc 181
           ||||||||||||| | |||||||||||||||||||||||||||||   |||||| |||||
Sbjct: 358 gaatccccgccgcgcgcggcgccgcgacctcaacgcactggatcccagtttagaagagtc 417

                                                                       
Query: 182 tgatggacaggacattggcattccagaagttggcatggtgttcaataaccacatggaggt 241
           ||||||| |||| |||||  ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 418 tgatggagaggatattggtgttccagaagttggcatggtgttcaataaccacacggaggt 477

                                                                       
Query: 242 caaccggttctaccgtaggtatgcccgtcgtgttggttttggtgtctcagttaggaggtc 301
           |||||| |||||||| |||||||| || |||||||| ||||| || || |||||||||||
Sbjct: 478 caaccgattctaccgaaggtatgctcgccgtgttggctttggggtgtctgttaggaggtc 537

                                                                       
Query: 302 ctcgttctcacaagaaggcacctgcttatatctcgagctgatgtgctgtaaaggagggcg 361
           ||| || |||||||| ||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 538 ctcattttcacaagagggcacctgcttatatctggagctcatgtgctgcaaaggagggcg 597

                                   
Query: 362 tccacgttatgagcctaaattcag 385
            |||||||||||||| || |||||
Sbjct: 598 gccacgttatgagccaaagttcag 621

>dbj|AK073527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046M02, full
           insert sequence
          Length = 3202

 Score =  301 bits (152), Expect = 9e-79
 Identities = 236/264 (89%)
 Strand = Plus / Plus

                                                                       
Query: 122 gaatccccgccgcccccggcgccgcgacctcaacgcactggatccgtatttagaggagtc 181
           ||||||||||||| | |||||||||||||||||||||||||||||   |||||| |||||
Sbjct: 358 gaatccccgccgcgcgcggcgccgcgacctcaacgcactggatcccagtttagaagagtc 417

                                                                       
Query: 182 tgatggacaggacattggcattccagaagttggcatggtgttcaataaccacatggaggt 241
           ||||||| |||| |||||  ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 418 tgatggagaggatattggtgttccagaagttggcatggtgttcaataaccacacggaggt 477

                                                                       
Query: 242 caaccggttctaccgtaggtatgcccgtcgtgttggttttggtgtctcagttaggaggtc 301
           |||||| |||||||| |||||||| || |||||||| ||||| || || |||||||||||
Sbjct: 478 caaccgattctaccgaaggtatgctcgccgtgttggctttggggtgtctgttaggaggtc 537

                                                                       
Query: 302 ctcgttctcacaagaaggcacctgcttatatctcgagctgatgtgctgtaaaggagggcg 361
           ||| || |||||||| ||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 538 ctcattttcacaagagggcacctgcttatatctggagctcatgtgctgcaaaggagggcg 597

                                   
Query: 362 tccacgttatgagcctaaattcag 385
            |||||||||||||| || |||||
Sbjct: 598 gccacgttatgagccaaagttcag 621

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  246 bits (124), Expect = 4e-62
 Identities = 193/216 (89%)
 Strand = Plus / Plus

                                                                            
Query: 170      tttagaggagtctgatggacaggacattggcattccagaagttggcatggtgttcaataa 229
                |||||| |||||||||||| |||| |||||  ||||||||||||||||||||||||||||
Sbjct: 23880539 tttagaagagtctgatggagaggatattggtgttccagaagttggcatggtgttcaataa 23880598

                                                                            
Query: 230      ccacatggaggtcaaccggttctaccgtaggtatgcccgtcgtgttggttttggtgtctc 289
                ||||| |||||||||||| |||||||| |||||||| || |||||||| ||||| || ||
Sbjct: 23880599 ccacacggaggtcaaccgattctaccgaaggtatgctcgccgtgttggctttggggtgtc 23880658

                                                                            
Query: 290      agttaggaggtcctcgttctcacaagaaggcacctgcttatatctcgagctgatgtgctg 349
                 |||||||||||||| || |||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 23880659 tgttaggaggtcctcattttcacaagagggcacctgcttatatctggagctcatgtgctg 23880718

                                                    
Query: 350      taaaggagggcgtccacgttatgagcctaaattcag 385
                 ||||||||||| |||||||||||||| || |||||
Sbjct: 23880719 caaaggagggcggccacgttatgagccaaagttcag 23880754



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                         
Query: 122      gaatccccgccgcccccggcgccgcgacctcaacgcactgg 162
                ||||||||||||| | |||||||||||||||||||||||||
Sbjct: 23879716 gaatccccgccgcgcgcggcgccgcgacctcaacgcactgg 23879756

>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0030C08
          Length = 163423

 Score =  246 bits (124), Expect = 4e-62
 Identities = 193/216 (89%)
 Strand = Plus / Plus

                                                                          
Query: 170    tttagaggagtctgatggacaggacattggcattccagaagttggcatggtgttcaataa 229
              |||||| |||||||||||| |||| |||||  ||||||||||||||||||||||||||||
Sbjct: 102205 tttagaagagtctgatggagaggatattggtgttccagaagttggcatggtgttcaataa 102264

                                                                          
Query: 230    ccacatggaggtcaaccggttctaccgtaggtatgcccgtcgtgttggttttggtgtctc 289
              ||||| |||||||||||| |||||||| |||||||| || |||||||| ||||| || ||
Sbjct: 102265 ccacacggaggtcaaccgattctaccgaaggtatgctcgccgtgttggctttggggtgtc 102324

                                                                          
Query: 290    agttaggaggtcctcgttctcacaagaaggcacctgcttatatctcgagctgatgtgctg 349
               |||||||||||||| || |||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 102325 tgttaggaggtcctcattttcacaagagggcacctgcttatatctggagctcatgtgctg 102384

                                                  
Query: 350    taaaggagggcgtccacgttatgagcctaaattcag 385
               ||||||||||| |||||||||||||| || |||||
Sbjct: 102385 caaaggagggcggccacgttatgagccaaagttcag 102420



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                       
Query: 122    gaatccccgccgcccccggcgccgcgacctcaacgcactgg 162
              ||||||||||||| | |||||||||||||||||||||||||
Sbjct: 101382 gaatccccgccgcgcgcggcgccgcgacctcaacgcactgg 101422

>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0496E03
          Length = 138622

 Score =  246 bits (124), Expect = 4e-62
 Identities = 193/216 (89%)
 Strand = Plus / Plus

                                                                         
Query: 170   tttagaggagtctgatggacaggacattggcattccagaagttggcatggtgttcaataa 229
             |||||| |||||||||||| |||| |||||  ||||||||||||||||||||||||||||
Sbjct: 14503 tttagaagagtctgatggagaggatattggtgttccagaagttggcatggtgttcaataa 14562

                                                                         
Query: 230   ccacatggaggtcaaccggttctaccgtaggtatgcccgtcgtgttggttttggtgtctc 289
             ||||| |||||||||||| |||||||| |||||||| || |||||||| ||||| || ||
Sbjct: 14563 ccacacggaggtcaaccgattctaccgaaggtatgctcgccgtgttggctttggggtgtc 14622

                                                                         
Query: 290   agttaggaggtcctcgttctcacaagaaggcacctgcttatatctcgagctgatgtgctg 349
              |||||||||||||| || |||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 14623 tgttaggaggtcctcattttcacaagagggcacctgcttatatctggagctcatgtgctg 14682

                                                 
Query: 350   taaaggagggcgtccacgttatgagcctaaattcag 385
              ||||||||||| |||||||||||||| || |||||
Sbjct: 14683 caaaggagggcggccacgttatgagccaaagttcag 14718



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                      
Query: 122   gaatccccgccgcccccggcgccgcgacctcaacgcactgg 162
             ||||||||||||| | |||||||||||||||||||||||||
Sbjct: 13680 gaatccccgccgcgcgcggcgccgcgacctcaacgcactgg 13720

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 61       cgacctcgccggcggtgggctc 82
                ||||||||||||||||||||||
Sbjct: 18619078 cgacctcgccggcggtgggctc 18619099

>dbj|AK106832.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-F10, full
            insert sequence
          Length = 2372

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 61   cgacctcgccggcggtgggctc 82
            ||||||||||||||||||||||
Sbjct: 1210 cgacctcgccggcggtgggctc 1231

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 61       cgacctcgccggcggtgggctc 82
                ||||||||||||||||||||||
Sbjct: 18545304 cgacctcgccggcggtgggctc 18545325

>emb|AL845345.9|CNS08CB7 Oryza sativa chromosome 12, . BAC OSJNBa0023G11 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 180599

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 61    cgacctcgccggcggtgggctc 82
             ||||||||||||||||||||||
Sbjct: 52530 cgacctcgccggcggtgggctc 52551

>gb|AC101807.12| Mus musculus chromosome 18, clone RP24-251J22, complete sequence
          Length = 171409

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 37    ccccacccgctcccaaaccctagcc 61
             |||||||||||||| ||||||||||
Sbjct: 67413 ccccacccgctccccaaccctagcc 67389

>ref|XM_516408.1| PREDICTED: Pan troglodytes similar to brain specific binding protein;
            BINP receptor (LOC460316), mRNA
          Length = 3103

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 125  tccccgccgcccccggcgccg 145
            |||||||||||||||||||||
Sbjct: 1613 tccccgccgcccccggcgccg 1593

>gb|BC057390.1| Homo sapiens Ras-induced senescence 1, mRNA (cDNA clone MGC:57838
           IMAGE:6175193), complete cds
          Length = 1798

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 125 tccccgccgcccccggcgccg 145
           |||||||||||||||||||||
Sbjct: 38  tccccgccgcccccggcgccg 18

>ref|NM_015444.1| Homo sapiens Ras-induced senescence 1 (RIS1), mRNA
          Length = 1797

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 125 tccccgccgcccccggcgccg 145
           |||||||||||||||||||||
Sbjct: 22  tccccgccgcccccggcgccg 2

>emb|CR621614.1| full-length cDNA clone CS0DN002YN22 of Adult brain of Homo sapiens
           (human)
          Length = 1781

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 125 tccccgccgcccccggcgccg 145
           |||||||||||||||||||||
Sbjct: 58  tccccgccgcccccggcgccg 38

>emb|CR615050.1| full-length cDNA clone CS0DF008YL24 of Fetal brain of Homo sapiens
           (human)
          Length = 1804

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 125 tccccgccgcccccggcgccg 145
           |||||||||||||||||||||
Sbjct: 38  tccccgccgcccccggcgccg 18

>emb|CR593631.1| full-length cDNA clone CS0DF009YM08 of Fetal brain of Homo sapiens
           (human)
          Length = 1796

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 125 tccccgccgcccccggcgccg 145
           |||||||||||||||||||||
Sbjct: 38  tccccgccgcccccggcgccg 18

>emb|CR591255.1| full-length cDNA clone CS0DF001YF09 of Fetal brain of Homo sapiens
           (human)
          Length = 1798

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 125 tccccgccgcccccggcgccg 145
           |||||||||||||||||||||
Sbjct: 58  tccccgccgcccccggcgccg 38

>gb|AC006515.7| Homo sapiens 3p22-7 PAC RPCI5-1053D16 (Roswell Park Cancer Institute
             Human PAC Library) complete sequence
          Length = 223542

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 125   tccccgccgcccccggcgccg 145
             |||||||||||||||||||||
Sbjct: 28072 tccccgccgcccccggcgccg 28092

>gb|AC010170.3| Homo sapiens 3p22-21.3 BAC RPCI11-487J21 (Roswell Park Cancer Institute
              Human BAC Library) complete sequence
          Length = 173977

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 125    tccccgccgcccccggcgccg 145
              |||||||||||||||||||||
Sbjct: 101327 tccccgccgcccccggcgccg 101347

>gb|AF438313.1| Homo sapiens Ras-induced senescence 1 (RIS1) mRNA, complete cds
          Length = 1797

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 125 tccccgccgcccccggcgccg 145
           |||||||||||||||||||||
Sbjct: 22  tccccgccgcccccggcgccg 2

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 127     cccgccgcccccggcgccgc 146
               ||||||||||||||||||||
Sbjct: 2248867 cccgccgcccccggcgccgc 2248886

>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0078F08, complete sequence
          Length = 165440

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 46    ctcccaaaccctagccgacctcgc 69
             |||||||||||||||| |||||||
Sbjct: 79347 ctcccaaaccctagcccacctcgc 79370

>ref|XM_649289.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (55.t00016)
           partial mRNA
          Length = 414

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 224 caataaccacatggaggtca 243
           ||||||||||||||||||||
Sbjct: 203 caataaccacatggaggtca 222

>emb|AL512292.5| Human DNA sequence from clone RP11-292O17 on chromosome 1 Contains a
             ribosomal protein L31 (RPL31) pseudogene, complete
             sequence
          Length = 135389

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   gtgttcaataaccacatgga 238
             ||||||||||||||||||||
Sbjct: 33998 gtgttcaataaccacatgga 33979

>gb|AC099780.2| Homo sapiens chromosome 3 clone RP11-769M23, complete sequence
          Length = 193793

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      ttcatttgtcaccaaaattt 22
              ||||||||||||||||||||
Sbjct: 147253 ttcatttgtcaccaaaattt 147234

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 46       ctcccaaaccctagccgacctcgc 69
                |||||||||||||||| |||||||
Sbjct: 18500032 ctcccaaaccctagcccacctcgc 18500055

>emb|AL929023.3| Zebrafish DNA sequence from clone DKEY-98G12 in linkage group 17,
              complete sequence
          Length = 198736

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      aattcatttgtcaccaaaat 20
              ||||||||||||||||||||
Sbjct: 190262 aattcatttgtcaccaaaat 190243

>gb|AF152364.1|AF152364 Homo sapiens constitutive fragile region FRA3B sequence
          Length = 170452

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     ttcatttgtcaccaaaattt 22
             ||||||||||||||||||||
Sbjct: 63770 ttcatttgtcaccaaaattt 63751

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 46       ctcccaaaccctagccgacctcgc 69
                |||||||||||||||| |||||||
Sbjct: 18659433 ctcccaaaccctagcccacctcgc 18659456


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,697,374
Number of Sequences: 3902068
Number of extensions: 2697374
Number of successful extensions: 54250
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53998
Number of HSP's gapped (non-prelim): 252
length of query: 385
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 363
effective length of database: 17,147,199,772
effective search space: 6224433517236
effective search space used: 6224433517236
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)