Clone Name | bastl47e06 |
---|---|
Clone Library Name | barley_pub |
>XKR6_RAT (Q5GH57) XK-related protein 6| Length = 638 Score = 32.3 bits (72), Expect = 0.31 Identities = 17/33 (51%), Positives = 20/33 (60%) Frame = +3 Query: 198 LSGDIIRNSSAAAKGGRQRRRPRDAAGSNPPPP 296 L G R S+AAA GG Q +P AAG +PP P Sbjct: 75 LLGKKPRRSAAAADGGDQPLQPPGAAGRHPPTP 107
>EPS8_HUMAN (Q12929) Epidermal growth factor receptor kinase substrate 8| Length = 822 Score = 31.2 bits (69), Expect = 0.69 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 6/42 (14%) Frame = +3 Query: 192 AQLSGDIIRNSSAAAKGGRQRRRP------RDAAGSNPPPPR 299 A L + I ++ + +KGG+Q+RRP +A S PPPPR Sbjct: 173 ANLISEDIESAISDSKGGKQKRRPDALRMISNADPSIPPPPR 214
>EPS8_PONPY (Q5R4H4) Epidermal growth factor receptor kinase substrate 8| Length = 822 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 6/42 (14%) Frame = +3 Query: 192 AQLSGDIIRNSSAAAKGGRQRRRP------RDAAGSNPPPPR 299 A L + I ++ + +KGG+Q+RRP +A PPPPR Sbjct: 173 ANLISEDIESAISDSKGGKQKRRPDALRMISNADPGIPPPPR 214
>EPS8_MOUSE (Q08509) Epidermal growth factor receptor kinase substrate 8| Length = 821 Score = 29.6 bits (65), Expect = 2.0 Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 5/43 (11%) Frame = +3 Query: 192 AQLSGDIIRNSSAAAKGGRQRRRP---RDAAGSNP--PPPRRA 305 A L + I ++ + +KGG+Q+RRP R A ++P PPP RA Sbjct: 173 ANLISEDIESAISDSKGGKQKRRPEALRMIAKADPGIPPPPRA 215
>IF2_GLUOX (Q5FQM3) Translation initiation factor IF-2| Length = 917 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 3/29 (10%) Frame = +3 Query: 225 SAAAKGGRQRRRP---RDAAGSNPPPPRR 302 S AA GG RRP R G+ P PPRR Sbjct: 245 SGAAAGGDDERRPAPRRSGPGAPPAPPRR 273
>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic| chromosome-associated protein) (MCAP) Length = 1400 Score = 28.1 bits (61), Expect = 5.9 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +3 Query: 204 GDIIRNSSAAAKGGRQRRRPRDAAGSNPPPP 296 GD + S + + + +P +AA +NPPPP Sbjct: 18 GDGLETSQMSTTQAQAQPQPANAASTNPPPP 48
>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)| Length = 1362 Score = 28.1 bits (61), Expect = 5.9 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +3 Query: 204 GDIIRNSSAAAKGGRQRRRPRDAAGSNPPPP 296 GD + S + + + +P +AA +NPPPP Sbjct: 18 GDGLETSQMSTTQAQAQPQPANAASTNPPPP 48
>DPOL_HCMVA (P08546) DNA polymerase (EC 2.7.7.7)| Length = 1242 Score = 27.7 bits (60), Expect = 7.7 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +3 Query: 198 LSGDIIRNSSAAAKGGRQRRRPRDAAGSNPPPPRR 302 LSG + A A G RQR +P A GS PP++ Sbjct: 7 LSGGV--TGGAVAGGRRQRSQPGSAQGSGKRPPQK 39
>DIAP3_HUMAN (Q9NSV4) Protein diaphanous homolog 3 (Diaphanous-related formin-3)| (DRF3) Length = 1110 Score = 27.7 bits (60), Expect = 7.7 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +3 Query: 222 SSAAAKGGRQRRRPRDAAGSNPPPP 296 SSA+ +G R+ + PR +PPPP Sbjct: 23 SSASLRGCRESKMPRRKGPQHPPPP 47 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,336,738 Number of Sequences: 219361 Number of extensions: 167537 Number of successful extensions: 1473 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1182 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1463 length of database: 80,573,946 effective HSP length: 77 effective length of database: 63,683,149 effective search space used: 1528395576 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)