>YB1C_SCHPO (P87177) Hypothetical WD-repeat protein C3D6.12 in chromosome II|
          Length = 922

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 30/100 (30%), Positives = 35/100 (35%), Gaps = 5/100 (5%)
 Frame = +3

Query: 69  MVKAYLRYEPALSFGVVASPESNVVYDPSGXXXXXXXX-----XXXXXWDLKRGLPXXXX 233
           MVK+Y RYEP   FGV+AS   N++  PS                   WDLK G      
Sbjct: 1   MVKSYTRYEPTEFFGVIASSGCNILGQPSSSAKSVGRAIVGGLESVLEWDLKTG------ 54

Query: 234 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHADGSIRLW 353
                                         G+ADGSIRLW
Sbjct: 55  ---QLLSKWKDSDCSAKVTCIANFDEMYAVGYADGSIRLW 91

>WDR3_HUMAN (Q9UNX4) WD-repeat protein 3|
          Length = 943

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = +3

Query: 69  MVKAYLRYEPALSFGVVASPESNVVY----DPSGXXXXXXXXXXXXXWDLKRG 215
           + K YLRY  +  FGV+ S + N+V+       G             WDL++G
Sbjct: 3   LTKQYLRYVASAVFGVIGSQKGNIVFVTLRGEKGRYVAVPACEHVFIWDLRKG 55

>DIP2_YEAST (Q12220) DOM34-interacting protein 2 (U3 small nucleolar|
           RNA-associated protein 12) (U3 snoRNA-associated protein
           12)
          Length = 943

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 26/108 (24%), Positives = 37/108 (34%), Gaps = 12/108 (11%)
 Frame = +3

Query: 69  MVKAYLRYEPALSFGVVASPESNVVYDPSGXXXX---------XXXXXXXXXWDLKRG-- 215
           MVK+Y R+E A +FGV+AS  +N V+ P+                       WD+K G  
Sbjct: 1   MVKSYQRFEQAAAFGVIAS-NANCVWIPASSGNSNGSGPGQLITSALEDVNIWDIKTGDL 59

Query: 216 -LPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHADGSIRLWD 356
                                                G+ADG I++WD
Sbjct: 60  VSKLSDGLPPGASDARGAKPAECTYLEAHKDTDLLAVGYADGVIKVWD 107

>CTND1_MOUSE (P30999) Catenin delta-1 (p120 catenin) (p120(ctn))|
           (Cadherin-associated Src substrate) (CAS) (p120(cas))
          Length = 911

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +3

Query: 18  PNPHN---YSPLPRRRRPGAMVKAYLRYEPALSFGVVA 122
           P  HN   YS +PR + PG +V+ Y   +P  +  VV+
Sbjct: 88  PQDHNHLLYSTIPRMQEPGQIVETYTEEDPEGAMSVVS 125

>CTND1_HUMAN (O60716) Catenin delta-1 (p120 catenin) (p120(ctn))|
           (Cadherin-associated Src substrate) (CAS) (p120(cas))
          Length = 968

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = +3

Query: 18  PNPHN---YSPLPRRRRPGAMVKAYLRYEPALSFGVVASPESN 137
           P  H+   YS +PR + PG +V+ Y   +P  +  VV+   S+
Sbjct: 88  PQDHSHLLYSTIPRMQEPGQIVETYTEEDPEGAMSVVSVETSD 130


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,912,863
Number of Sequences: 219361
Number of extensions: 223024
Number of successful extensions: 928
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)