>dbj|AK072741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136H15, full
           insert sequence
          Length = 3559

 Score =  131 bits (66), Expect = 2e-27
 Identities = 142/166 (85%), Gaps = 1/166 (0%)
 Strand = Plus / Plus

                                                                       
Query: 215 gaagatgggtttcatgggggcgaagctgttcccgtcgtgcgagagcatgtgcgtctgctg 274
           ||||||||||||||||   |||||||| || || ||||| ||||| |||||||| |||||
Sbjct: 303 gaagatgggtttcatgtcagcgaagctctttccttcgtgtgagagtatgtgcgtgtgctg 362

                                                                       
Query: 275 cccggcgctgcgtccgagctcgcgccgccccgtcaagcggtacaagaagctgctcgctga 334
            || || ||||| || |||||||| ||||| |||||||| |||||||| ||||| || ||
Sbjct: 363 tccagctctgcgcccaagctcgcggcgccctgtcaagcgttacaagaaactgcttgccga 422

                                                         
Query: 335 gatattccccaagacgcctgagggcc-cccaaatgataggaaaatc 379
           ||||||||||||||||||||| ||||  |||||||| |||||||||
Sbjct: 423 gatattccccaagacgcctgatggccttccaaatgagaggaaaatc 468

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  119 bits (60), Expect = 7e-24
 Identities = 120/140 (85%)
 Strand = Plus / Minus

                                                                            
Query: 215      gaagatgggtttcatgggggcgaagctgttcccgtcgtgcgagagcatgtgcgtctgctg 274
                ||||||||||||||||   |||||||| || || ||||| ||||| |||||||| |||||
Sbjct: 10949563 gaagatgggtttcatgtcagcgaagctctttccttcgtgtgagagtatgtgcgtgtgctg 10949504

                                                                            
Query: 275      cccggcgctgcgtccgagctcgcgccgccccgtcaagcggtacaagaagctgctcgctga 334
                 || || ||||| || |||||||| ||||| |||||||| |||||||| ||||| || ||
Sbjct: 10949503 tccagctctgcgcccaagctcgcggcgccctgtcaagcgttacaagaaactgcttgccga 10949444

                                    
Query: 335      gatattccccaagacgcctg 354
                ||||||||||||||||||||
Sbjct: 10949443 gatattccccaagacgcctg 10949424



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 94       gggtcgccgccgtcgccatt 113
                ||||||||||||||||||||
Sbjct: 14521765 gggtcgccgccgtcgccatt 14521784

>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05,
             from chromosome 3, complete sequence
          Length = 127348

 Score =  119 bits (60), Expect = 7e-24
 Identities = 120/140 (85%)
 Strand = Plus / Plus

                                                                         
Query: 215   gaagatgggtttcatgggggcgaagctgttcccgtcgtgcgagagcatgtgcgtctgctg 274
             ||||||||||||||||   |||||||| || || ||||| ||||| |||||||| |||||
Sbjct: 31466 gaagatgggtttcatgtcagcgaagctctttccttcgtgtgagagtatgtgcgtgtgctg 31525

                                                                         
Query: 275   cccggcgctgcgtccgagctcgcgccgccccgtcaagcggtacaagaagctgctcgctga 334
              || || ||||| || |||||||| ||||| |||||||| |||||||| ||||| || ||
Sbjct: 31526 tccagctctgcgcccaagctcgcggcgccctgtcaagcgttacaagaaactgcttgccga 31585

                                 
Query: 335   gatattccccaagacgcctg 354
             ||||||||||||||||||||
Sbjct: 31586 gatattccccaagacgcctg 31605

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  119 bits (60), Expect = 7e-24
 Identities = 120/140 (85%)
 Strand = Plus / Minus

                                                                            
Query: 215      gaagatgggtttcatgggggcgaagctgttcccgtcgtgcgagagcatgtgcgtctgctg 274
                ||||||||||||||||   |||||||| || || ||||| ||||| |||||||| |||||
Sbjct: 10947664 gaagatgggtttcatgtcagcgaagctctttccttcgtgtgagagtatgtgcgtgtgctg 10947605

                                                                            
Query: 275      cccggcgctgcgtccgagctcgcgccgccccgtcaagcggtacaagaagctgctcgctga 334
                 || || ||||| || |||||||| ||||| |||||||| |||||||| ||||| || ||
Sbjct: 10947604 tccagctctgcgcccaagctcgcggcgccctgtcaagcgttacaagaaactgcttgccga 10947545

                                    
Query: 335      gatattccccaagacgcctg 354
                ||||||||||||||||||||
Sbjct: 10947544 gatattccccaagacgcctg 10947525



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 94       gggtcgccgccgtcgccatt 113
                ||||||||||||||||||||
Sbjct: 14516736 gggtcgccgccgtcgccatt 14516755

>gb|M60598.1|WHTDHDPD17 T.aestivum dihydrodipicolinate synthase (DHDPS) mRNA, complete cds,
           clone pDA17
          Length = 1458

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 90  gcgcgggtcgccgccgtcgccattacccttcttccccgtcgcggcatcgcg 140
           ||||| ||||||||||||||| || || |||||||||| || | |||||||
Sbjct: 147 gcgcgcgtcgccgccgtcgccgttcccgttcttccccgccgggacatcgcg 197

>ref|XM_474743.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 4392

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 91   cgcgggtcgccgccgtcgcca 111
            |||||||||||||||||||||
Sbjct: 3674 cgcgggtcgccgccgtcgcca 3694

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 91      cgcgggtcgccgccgtcgcca 111
               |||||||||||||||||||||
Sbjct: 6159583 cgcgggtcgccgccgtcgcca 6159563

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 286     gtccgagctcgcgccgccccg 306
               |||||||||||||||||||||
Sbjct: 8323883 gtccgagctcgcgccgccccg 8323903

>dbj|AK121055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056G06, full
            insert sequence
          Length = 5009

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 91   cgcgggtcgccgccgtcgcca 111
            |||||||||||||||||||||
Sbjct: 3970 cgcgggtcgccgccgtcgcca 3990

>emb|AL606997.3|OSJN00115 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0059D20,
             complete sequence
          Length = 147108

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 91    cgcgggtcgccgccgtcgcca 111
             |||||||||||||||||||||
Sbjct: 55368 cgcgggtcgccgccgtcgcca 55348

>ref|XM_522653.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA 4930434E21
            (LOC467255), mRNA
          Length = 2313

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 200  ggagctccagcctccgaaga 219
            ||||||||||||||||||||
Sbjct: 2130 ggagctccagcctccgaaga 2149

>gb|AC093029.4| Homo sapiens chromosome X clone XX-16186 map p11.4, complete sequence
          Length = 115625

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     ttccccatccacccgtctcc 25
             ||||||||||||||||||||
Sbjct: 18263 ttccccatccacccgtctcc 18282

>gb|AC092473.4| Homo sapiens chromosome X clone RP11-126D17 map p11.4, complete sequence
          Length = 138039

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      ttccccatccacccgtctcc 25
              ||||||||||||||||||||
Sbjct: 100173 ttccccatccacccgtctcc 100192

>gb|AC148942.1| Pan troglodytes chromosome X clone RP43-025L12 map human ortholog p11.4
              complete sequence
          Length = 141470

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      ttccccatccacccgtctcc 25
              ||||||||||||||||||||
Sbjct: 125411 ttccccatccacccgtctcc 125430

>ref|XM_992126.1| PREDICTED: Mus musculus hypothetical protein LOC667740 (LOC667740),
           mRNA
          Length = 723

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 90  gcgcgggtcgccgccgtcgccatt 113
           |||||||||| |||||||||||||
Sbjct: 267 gcgcgggtcggcgccgtcgccatt 244

>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 89      tgcgcgggtcgccgccgtcg 108
               ||||||||||||||||||||
Sbjct: 5028115 tgcgcgggtcgccgccgtcg 5028096

>gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete
              sequence
          Length = 147130

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     gggtcgccgccgtcgccatt 113
              ||||||||||||||||||||
Sbjct: 135946 gggtcgccgccgtcgccatt 135927

>gb|AC100789.2| Homo sapiens chromosome X, clone RP11-907I17, complete sequence
          Length = 183453

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      ttccccatccacccgtctcc 25
              ||||||||||||||||||||
Sbjct: 172613 ttccccatccacccgtctcc 172632

>gb|AF524932.1| Escherichia coli strain EC317 clone EC2165 unknown sequence
          Length = 3897

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  tgcgcgggtcgccgccgtcg 108
           ||||||||||||||||||||
Sbjct: 798 tgcgcgggtcgccgccgtcg 817

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 115      cccttcttccccgtcgcggc 134
                ||||||||||||||||||||
Sbjct: 11162930 cccttcttccccgtcgcggc 11162911

>gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genomic sequence, complete
             sequence
          Length = 135594

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    gggtcgccgccgtcgccatt 113
             ||||||||||||||||||||
Sbjct: 19620 gggtcgccgccgtcgccatt 19601

>dbj|AP005748.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0042E12
          Length = 164688

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   cccttcttccccgtcgcggc 134
             ||||||||||||||||||||
Sbjct: 37752 cccttcttccccgtcgcggc 37733

>dbj|AP004007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1217_C01
          Length = 100180

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   cccttcttccccgtcgcggc 134
             ||||||||||||||||||||
Sbjct: 92836 cccttcttccccgtcgcggc 92817

>emb|AL591665.15| Mouse DNA sequence from clone RP23-333A18 on chromosome 2, complete
              sequence
          Length = 181419

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    ttggaggttacttggagttg 200
              ||||||||||||||||||||
Sbjct: 153910 ttggaggttacttggagttg 153929

>emb|AL663030.12| Mouse DNA sequence from clone RP23-84C12 on chromosome 11, complete
             sequence
          Length = 212085

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 90    gcgcgggtcgccgccgtcgccatt 113
             |||||||||| |||||||||||||
Sbjct: 37480 gcgcgggtcggcgccgtcgccatt 37503


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,872,158
Number of Sequences: 3902068
Number of extensions: 2872158
Number of successful extensions: 65152
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64755
Number of HSP's gapped (non-prelim): 397
length of query: 379
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 357
effective length of database: 17,147,199,772
effective search space: 6121550318604
effective search space used: 6121550318604
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)