ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl47d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK066330.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 9e-51
2ref|XM_473921.1| Oryza sativa (japonica cultivar-group), predic... 202 6e-49
3emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4,... 165 1e-37
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 165 1e-37
5emb|Z48624.1|HVGRP3 H.vulgare mRNA for glycine-rich RNA binding ... 133 4e-28
6ref|XM_476020.1| Oryza sativa (japonica cultivar-group), predic... 76 9e-11
7gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 76 9e-11
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 76 9e-11
9dbj|AK099566.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 9e-11
10dbj|AK071878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 9e-11
11ref|NM_192531.1| Oryza sativa (japonica cultivar-group), predic... 60 5e-06
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 60 5e-06
13dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic D... 60 5e-06
14ref|NM_100673.2| Arabidopsis thaliana unknown protein AT1G07990 ... 56 8e-05
15gb|AY127028.1| Arabidopsis thaliana At1g07990/T6D22_5 mRNA, comp... 56 8e-05
16gb|BT004535.1| Arabidopsis thaliana At1g07990/T6D22_5 gene, comp... 56 8e-05
17gb|AC026875.4|AC026875 Genomic sequence for Arabidopsis thaliana... 56 8e-05
18gb|U63815.1|ATU63815 Arabidopsis thaliana AT.I.24-1, AT.I.24-2, ... 56 8e-05
19gb|U32310.1|TAU32310 Triticum aestivum single-stranded nucleic a... 44 0.31
20gb|AF129108.2|AF129108 Homo sapiens chromosome 21 clone cosmid c... 42 1.2
21dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
22gb|AC107075.4| Homo sapiens BAC clone RP11-452N17 from 2, comple... 42 1.2
23gb|AC011293.5|AC011293 Homo sapiens BAC clone RP11-75F5 from Y, ... 42 1.2
24dbj|BS000196.1| Pan troglodytes chromosome 22 clone:RP43-025M10,... 42 1.2
25emb|AJ229042.1|HS229042 Homo sapiens 959 kb contig between AML1 ... 42 1.2
26emb|AL163267.2|HS21C067 Homo sapiens chromosome 21 segment HS21C067 42 1.2
27gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
28emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.2
29dbj|AP006730.1| Lotus japonicus genomic DNA, chromosome 6, clone... 42 1.2
30emb|AL772315.4| Mouse DNA sequence from clone RP23-54A13 on chro... 42 1.2
31emb|AL732634.13| Mouse DNA sequence from clone RP23-322G19 on ch... 42 1.2
32gb|AC116758.11| Mus musculus chromosome 8, clone RP23-383A10, co... 40 4.8
33ref|NM_114388.2| Arabidopsis thaliana unknown protein AT3G45190 ... 40 4.8
34gb|AC120173.9| Mus musculus chromosome 1, clone RP24-485J8, comp... 40 4.8
35gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.8
36gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.8
37gb|AC135240.2| Mus musculus BAC clone RP24-63O24 from chromosome... 40 4.8
38gb|AC130841.4| Mus musculus BAC clone RP24-445L16 from chromosom... 40 4.8
39gb|AC063955.20| Homo sapiens 3 BAC RP11-441M10 (Roswell Park Can... 40 4.8
40gb|AC079325.10| Homo sapiens chromosome 17, clone RP11-194J3, co... 40 4.8
41gb|AC098709.3| Mus musculus BAC clone RP23-1K14 from 1, complete... 40 4.8
42gb|AC113511.7| Mus musculus chromosome 1, clone RP23-378O19, com... 40 4.8
43gb|AC117550.8| Mus musculus chromosome 1, clone RP24-571N3, comp... 40 4.8
44ref|XM_795154.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 4.8
45emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chr... 40 4.8
46emb|AL138649.1|ATT14D3 Arabidopsis thaliana DNA chromosome 3, BA... 40 4.8
47gb|AC074140.5| Homo sapiens chromosome 19 clone LLNLF-18A12, com... 40 4.8
48gb|AC100825.2| Homo sapiens chromosome 15, clone RP11-1152M12, c... 40 4.8
49gb|AC021553.14| Homo sapiens chromosome 15, clone RP11-709B3, co... 40 4.8
50dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 40 4.8
51gb|AC010864.11| Homo sapiens chromosome 10 clone RP11-351D16, co... 40 4.8
52gb|AC008388.7| Homo sapiens chromosome 5 clone CTC-231O11, compl... 40 4.8
53gb|AC023425.20| Homo sapiens 12 BAC RP11-350G2 (Roswell Park Can... 40 4.8
54dbj|AK081699.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 4.8
55gb|AC158518.2| Mus musculus BAC clone RP24-86K19 from chromosome... 40 4.8
56dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
57gb|AC011503.4|AC011503 Homo sapiens chromosome 19 clone CTB-92J2... 40 4.8
58dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
59gb|AC073488.23| Homo sapiens X BAC RP11-126O22 (Roswell Park Can... 40 4.8
60dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
61dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
62dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
63dbj|AP004005.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
64dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
65dbj|AK120035.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
66dbj|AK067029.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
67gb|AY111977.1| Zea mays CL50557_1 mRNA sequence 40 4.8
68dbj|AP003396.1| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 4.8
69emb|AL954854.3|CNS08CD8 Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.8
70emb|AL773565.17| Mouse DNA sequence from clone RP23-76A20 on chr... 40 4.8
71emb|AL929199.11| Mouse DNA sequence from clone RP23-458A10 on ch... 40 4.8
72gb|AC135187.3| Mus musculus BAC clone RP24-263A3 from 5, complet... 40 4.8
73gb|AC140220.4| Mus musculus BAC clone RP23-279P6 from 5, complet... 40 4.8
74dbj|AB209209.1| Homo sapiens mRNA for Thy-1 cell surface antigen... 40 4.8
75emb|AL672174.8| Mouse DNA sequence from clone RP23-408K4 on chro... 40 4.8
76gb|M11749.1|HUMTHY1A Human Thy-1 glycoprotein gene, complete cds 40 4.8
77emb|AL772185.10| Mouse DNA sequence from clone RP23-103G12 on ch... 40 4.8
78dbj|D17760.1|RICARF Oryza sativa (japonica cultivar-group) mRNA ... 40 4.8 
>dbj|AK066330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061K16, full
           insert sequence
          Length = 2332

 Score =  208 bits (105), Expect = 9e-51
 Identities = 138/149 (92%)
 Strand = Plus / Plus

                                                                       
Query: 212 ttgttattgtacaagatgttttggcatgtacctggactttctgccgcatcaccagtggat 271
           |||||| ||| ||| ||||||||||| ||||||||| | ||||| |||||||| ||||||
Sbjct: 334 ttgttactgtgcaaaatgttttggcacgtacctggaatctctgctgcatcaccggtggat 393

                                                                       
Query: 272 actattttagacaaggaaaatttcaagttggaagaccctcttgatgaggatgaaataatc 331
           |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 394 actattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaaataatc 453

                                        
Query: 332 caggagtgcaaagcactgaacacccgcct 360
           ||||||||||||||||| |||||||||||
Sbjct: 454 caggagtgcaaagcactaaacacccgcct 482
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>ref|XM_473921.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2331

 Score =  202 bits (102), Expect = 6e-49
 Identities = 126/134 (94%)
 Strand = Plus / Plus

                                                                       
Query: 227 atgttttggcatgtacctggactttctgccgcatcaccagtggatactattttagacaag 286
           ||||||||||| ||||||||| | ||||| |||||||| |||||||||||||||||||||
Sbjct: 1   atgttttggcacgtacctggaatctctgctgcatcaccggtggatactattttagacaag 60

                                                                       
Query: 287 gaaaatttcaagttggaagaccctcttgatgaggatgaaataatccaggagtgcaaagca 346
           ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61  gaaaatttcaagttggaggaccttcttgatgaggatgaaataatccaggagtgcaaagca 120

                         
Query: 347 ctgaacacccgcct 360
           || |||||||||||
Sbjct: 121 ctaaacacccgcct 134
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>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23,
              complete sequence
          Length = 164805

 Score =  165 bits (83), Expect = 1e-37
 Identities = 92/95 (96%)
 Strand = Plus / Plus

                                                                          
Query: 266    gtggatactattttagacaaggaaaatttcaagttggaagaccctcttgatgaggatgaa 325
              |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 145165 gtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaa 145224

                                                 
Query: 326    ataatccaggagtgcaaagcactgaacacccgcct 360
              ||||||||||||||||||||||| |||||||||||
Sbjct: 145225 ataatccaggagtgcaaagcactaaacacccgcct 145259



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                   
Query: 212    ttgttattgtacaagatgttttggcatgtacctggactttctgccgcatcacc 264
              |||||| ||| ||| ||||||||||| ||||||||| | ||||| ||||||||
Sbjct: 145029 ttgttactgtgcaaaatgttttggcacgtacctggaatctctgctgcatcacc 145081
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  165 bits (83), Expect = 1e-37
 Identities = 92/95 (96%)
 Strand = Plus / Plus

                                                                            
Query: 266      gtggatactattttagacaaggaaaatttcaagttggaagaccctcttgatgaggatgaa 325
                |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 31567482 gtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaa 31567541

                                                   
Query: 326      ataatccaggagtgcaaagcactgaacacccgcct 360
                ||||||||||||||||||||||| |||||||||||
Sbjct: 31567542 ataatccaggagtgcaaagcactaaacacccgcct 31567576



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                     
Query: 212      ttgttattgtacaagatgttttggcatgtacctggactttctgccgcatcacc 264
                |||||| ||| ||| ||||||||||| ||||||||| | ||||| ||||||||
Sbjct: 31567346 ttgttactgtgcaaaatgttttggcacgtacctggaatctctgctgcatcacc 31567398
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>emb|Z48624.1|HVGRP3 H.vulgare mRNA for glycine-rich RNA binding protein
          Length = 907

 Score =  133 bits (67), Expect = 4e-28
 Identities = 70/71 (98%)
 Strand = Plus / Plus

                                                                       
Query: 73  cgagagacagtagctagcctagcctagggttttcgtaggagaaggagaggaggagatcca 132
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cgagagccagtagctagcctagcctagggttttcgtaggagaaggagaggaggagatcca 60

                      
Query: 133 tggcggagacg 143
           |||||||||||
Sbjct: 61  tggcggagacg 71
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>ref|XM_476020.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2313

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                       
Query: 266 gtggatactattttagacaaggaaaatttcaagttggaagaccctcttgatgaggatgaa 325
           |||||||| ||| |||||||||| || ||||  || ||||| | |||||| |||||||||
Sbjct: 40  gtggatacaattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaa 99

                                     
Query: 326 ataatccaggagtgcaaagcactgaa 351
           ||||| |||||||||||||| |||||
Sbjct: 100 ataattcaggagtgcaaagcgctgaa 125
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>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
             complete sequence
          Length = 142196

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                         
Query: 266   gtggatactattttagacaaggaaaatttcaagttggaagaccctcttgatgaggatgaa 325
             |||||||| ||| |||||||||| || ||||  || ||||| | |||||| |||||||||
Sbjct: 79883 gtggatacaattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaa 79942

                                       
Query: 326   ataatccaggagtgcaaagcactgaa 351
             ||||| |||||||||||||| |||||
Sbjct: 79943 ataattcaggagtgcaaagcgctgaa 79968
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                            
Query: 266      gtggatactattttagacaaggaaaatttcaagttggaagaccctcttgatgaggatgaa 325
                |||||||| ||| |||||||||| || ||||  || ||||| | |||||| |||||||||
Sbjct: 29301226 gtggatacaattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaa 29301285

                                          
Query: 326      ataatccaggagtgcaaagcactgaa 351
                ||||| |||||||||||||| |||||
Sbjct: 29301286 ataattcaggagtgcaaagcgctgaa 29301311



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 111      gagaaggagaggaggagatc 130
                ||||||||||||||||||||
Sbjct: 23915298 gagaaggagaggaggagatc 23915279



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 86       ctagcctagcctagggtttt 105
                ||||||||||||||||||||
Sbjct: 16518507 ctagcctagcctagggtttt 16518488
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>dbj|AK099566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034M16, full
           insert sequence
          Length = 3155

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                       
Query: 266 gtggatactattttagacaaggaaaatttcaagttggaagaccctcttgatgaggatgaa 325
           |||||||| ||| |||||||||| || ||||  || ||||| | |||||| |||||||||
Sbjct: 263 gtggatacaattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaa 322

                                     
Query: 326 ataatccaggagtgcaaagcactgaa 351
           ||||| |||||||||||||| |||||
Sbjct: 323 ataattcaggagtgcaaagcgctgaa 348
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>dbj|AK071878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039C12, full
           insert sequence
          Length = 2733

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                       
Query: 266 gtggatactattttagacaaggaaaatttcaagttggaagaccctcttgatgaggatgaa 325
           |||||||| ||| |||||||||| || ||||  || ||||| | |||||| |||||||||
Sbjct: 250 gtggatacaattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaa 309

                                     
Query: 326 ataatccaggagtgcaaagcactgaa 351
           ||||| |||||||||||||| |||||
Sbjct: 310 ataattcaggagtgcaaagcgctgaa 335
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>ref|NM_192531.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2370

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                       
Query: 266 gtggatactattttagacaaggaaaatttcaagttggaagaccctcttgatgaggatgaa 325
           |||||||| ||  |||||||||||||||| |   ||||||| | |||||| |||||||||
Sbjct: 172 gtggatacaatcctagacaaggaaaattttacactggaagaacttcttgacgaggatgaa 231

                                     
Query: 326 ataatccaggagtgcaaagcactgaa 351
           || || || ||||||||||| |||||
Sbjct: 232 attattcaagagtgcaaagctctgaa 257
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                            
Query: 266      gtggatactattttagacaaggaaaatttcaagttggaagaccctcttgatgaggatgaa 325
                |||||||| ||  |||||||||||||||| |   ||||||| | |||||| |||||||||
Sbjct: 22772327 gtggatacaatcctagacaaggaaaattttacactggaagaacttcttgacgaggatgaa 22772386

                                          
Query: 326      ataatccaggagtgcaaagcactgaa 351
                || || || ||||||||||| |||||
Sbjct: 22772387 attattcaagagtgcaaagctctgaa 22772412



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 105     tcgtaggagaaggagaggag 124
               ||||||||||||||||||||
Sbjct: 6799136 tcgtaggagaaggagaggag 6799155



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 110     ggagaaggagaggaggagatccat 133
               |||| |||||||||||||||||||
Sbjct: 4062951 ggaggaggagaggaggagatccat 4062974
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>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0712E02
          Length = 158084

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                         
Query: 266   gtggatactattttagacaaggaaaatttcaagttggaagaccctcttgatgaggatgaa 325
             |||||||| ||  |||||||||||||||| |   ||||||| | |||||| |||||||||
Sbjct: 89716 gtggatacaatcctagacaaggaaaattttacactggaagaacttcttgacgaggatgaa 89775

                                       
Query: 326   ataatccaggagtgcaaagcactgaa 351
             || || || ||||||||||| |||||
Sbjct: 89776 attattcaagagtgcaaagctctgaa 89801
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>ref|NM_100673.2| Arabidopsis thaliana unknown protein AT1G07990 mRNA, complete cds
          Length = 2904

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 278 ttagacaaggaaaatttcaagttggaagaccctcttgatgagga 321
           |||||||| |||||||||| ||||||||| | ||||||||||||
Sbjct: 307 ttagacaaagaaaatttcacgttggaagagcttcttgatgagga 350
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>gb|AY127028.1| Arabidopsis thaliana At1g07990/T6D22_5 mRNA, complete cds
          Length = 2905

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 278 ttagacaaggaaaatttcaagttggaagaccctcttgatgagga 321
           |||||||| |||||||||| ||||||||| | ||||||||||||
Sbjct: 307 ttagacaaagaaaatttcacgttggaagagcttcttgatgagga 350
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>gb|BT004535.1| Arabidopsis thaliana At1g07990/T6D22_5 gene, complete cds
          Length = 2409

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 278 ttagacaaggaaaatttcaagttggaagaccctcttgatgagga 321
           |||||||| |||||||||| ||||||||| | ||||||||||||
Sbjct: 52  ttagacaaagaaaatttcacgttggaagagcttcttgatgagga 95
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>gb|AC026875.4|AC026875 Genomic sequence for Arabidopsis thaliana BAC T6D22 from chromosome I,
             complete sequence
          Length = 120965

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 278   ttagacaaggaaaatttcaagttggaagaccctcttgatgagga 321
             |||||||| |||||||||| ||||||||| | ||||||||||||
Sbjct: 33583 ttagacaaagaaaatttcacgttggaagagcttcttgatgagga 33626
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>gb|U63815.1|ATU63815 Arabidopsis thaliana AT.I.24-1, AT.I.24-2, AT.I.24-3, AT.I.24-4,
             AT.I.24-5, AT.I.24-6, AT.I.24-9 and AT.I.24-14 genes,
             partial cds, AT.I.24-7, ascorbate peroxidase (ATHAPX1),
             EF-1alpha-A1, -A2 and -A3 (EF-1alpha) and AT.I.24-13
             genes, complete cds
          Length = 63093

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 278   ttagacaaggaaaatttcaagttggaagaccctcttgatgagga 321
             |||||||| |||||||||| ||||||||| | ||||||||||||
Sbjct: 62155 ttagacaaagaaaatttcacgttggaagagcttcttgatgagga 62198
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>gb|U32310.1|TAU32310 Triticum aestivum single-stranded nucleic acid binding protein
           (whGRP-1) gene, complete cds
          Length = 937

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 81  agtagctagcctagcctagggttttcgtag 110
           |||||||||||||| ||||||||| |||||
Sbjct: 45  agtagctagcctagtctagggtttccgtag 74
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>gb|AF129108.2|AF129108 Homo sapiens chromosome 21 clone cosmid clone D75C1 map 21q22.2,
            complete sequence
          Length = 40874

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 109  aggagaaggagaggaggagat 129
            |||||||||||||||||||||
Sbjct: 9660 aggagaaggagaggaggagat 9640
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 109     aggagaaggagaggaggagat 129
               |||||||||||||||||||||
Sbjct: 1146072 aggagaaggagaggaggagat 1146052



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      aggagaaggagaggaggaga 128
                ||||||||||||||||||||
Sbjct: 15712395 aggagaaggagaggaggaga 15712414
to top
>gb|AC107075.4| Homo sapiens BAC clone RP11-452N17 from 2, complete sequence
          Length = 176425

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 180   gagactgtgagggagctggat 200
             |||||||||||||||||||||
Sbjct: 35477 gagactgtgagggagctggat 35497
to top
>gb|AC011293.5|AC011293 Homo sapiens BAC clone RP11-75F5 from Y, complete sequence
          Length = 159722

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 107    gtaggagaaggagaggaggag 127
              |||||||||||||||||||||
Sbjct: 129979 gtaggagaaggagaggaggag 129959
to top
>dbj|BS000196.1| Pan troglodytes chromosome 22 clone:RP43-025M10, map 22, complete
             sequences
          Length = 196989

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 109   aggagaaggagaggaggagat 129
             |||||||||||||||||||||
Sbjct: 94496 aggagaaggagaggaggagat 94476
to top
>emb|AJ229042.1|HS229042 Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22,
              segment 2/3
          Length = 348050

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 109    aggagaaggagaggaggagat 129
              |||||||||||||||||||||
Sbjct: 235625 aggagaaggagaggaggagat 235645
to top
>emb|AL163267.2|HS21C067 Homo sapiens chromosome 21 segment HS21C067
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 109    aggagaaggagaggaggagat 129
              |||||||||||||||||||||
Sbjct: 302452 aggagaaggagaggaggagat 302432
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 109     aggagaaggagaggaggagat 129
               |||||||||||||||||||||
Sbjct: 1146072 aggagaaggagaggaggagat 1146052



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      aggagaaggagaggaggaga 128
                ||||||||||||||||||||
Sbjct: 15665628 aggagaaggagaggaggaga 15665647
to top
>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 126974

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 109   aggagaaggagaggaggagat 129
             |||||||||||||||||||||
Sbjct: 85055 aggagaaggagaggaggagat 85035
to top
>dbj|AP006730.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT45B09, TM0885b,
            complete sequence
          Length = 44466

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 284  aaggaaaatttcaagttggaagaccctcttgat 316
            ||||||||| |||||||||||||  ||||||||
Sbjct: 5137 aaggaaaatctcaagttggaagagactcttgat 5105



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 284  aaggaaaatttcaagttggaagaccctcttgat 316
            ||||||||| |||||||||||||  ||||||||
Sbjct: 4080 aaggaaaatatcaagttggaagagactcttgat 4048
to top
>emb|AL772315.4| Mouse DNA sequence from clone RP23-54A13 on chromosome 4, complete
              sequence
          Length = 200266

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 285    aggaaaatttcaagttggaag 305
              |||||||||||||||||||||
Sbjct: 140853 aggaaaatttcaagttggaag 140873
to top
>emb|AL732634.13| Mouse DNA sequence from clone RP23-322G19 on chromosome 4, complete
             sequence
          Length = 203176

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 285   aggaaaatttcaagttggaag 305
             |||||||||||||||||||||
Sbjct: 10293 aggaaaatttcaagttggaag 10313
to top
>gb|AC116758.11| Mus musculus chromosome 8, clone RP23-383A10, complete sequence
          Length = 190294

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    aggagaaggagaggaggaga 128
              ||||||||||||||||||||
Sbjct: 137483 aggagaaggagaggaggaga 137464
to top
>ref|NM_114388.2| Arabidopsis thaliana unknown protein AT3G45190 mRNA, complete cds
          Length = 2493

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 278 ttagacaaggaaaatttcaagttggaagaccctcttgatgaggatgaaataatcca 333
           |||||||||||| ||||||  |||||||| | | | |||||||| || ||||||||
Sbjct: 52  ttagacaaggaagatttcactttggaagaacttttggatgaggaagacataatcca 107
to top
>gb|AC120173.9| Mus musculus chromosome 1, clone RP24-485J8, complete sequence
          Length = 189779

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   aggagaaggagaggaggaga 128
             ||||||||||||||||||||
Sbjct: 34552 aggagaaggagaggaggaga 34533
to top
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10,
             complete sequence
          Length = 134183

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    ctagcctagcctagggtttt 105
             ||||||||||||||||||||
Sbjct: 17246 ctagcctagcctagggtttt 17227
to top
>gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1119_H02,
              complete sequence
          Length = 138584

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    gagaaggagaggaggagatc 130
              ||||||||||||||||||||
Sbjct: 119133 gagaaggagaggaggagatc 119114
to top
>gb|AC135240.2| Mus musculus BAC clone RP24-63O24 from chromosome 5, complete sequence
          Length = 196371

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    aggagaaggagaggaggaga 128
              ||||||||||||||||||||
Sbjct: 138340 aggagaaggagaggaggaga 138359



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    aggagaaggagaggaggaga 128
              ||||||||||||||||||||
Sbjct: 138306 aggagaaggagaggaggaga 138325



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    aggagaaggagaggaggaga 128
              ||||||||||||||||||||
Sbjct: 138292 aggagaaggagaggaggaga 138311
to top
>gb|AC130841.4| Mus musculus BAC clone RP24-445L16 from chromosome 8, complete sequence
          Length = 174384

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   aggagaaggagaggaggaga 128
             ||||||||||||||||||||
Sbjct: 37244 aggagaaggagaggaggaga 37225
to top
>gb|AC063955.20| Homo sapiens 3 BAC RP11-441M10 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 201692

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 270  atactattttagacaaggaaaatttcaa 297
            |||||||||||| |||||||||| ||||
Sbjct: 2298 atactattttaggcaaggaaaatatcaa 2325
to top
>gb|AC079325.10| Homo sapiens chromosome 17, clone RP11-194J3, complete sequence
          Length = 191746

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   ttaaatctgcttggtttctg 180
             ||||||||||||||||||||
Sbjct: 84624 ttaaatctgcttggtttctg 84605
to top
>gb|AC098709.3| Mus musculus BAC clone RP23-1K14 from 1, complete sequence
          Length = 189774

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    aggagaaggagaggaggaga 128
              ||||||||||||||||||||
Sbjct: 141091 aggagaaggagaggaggaga 141110
to top
>gb|AC113511.7| Mus musculus chromosome 1, clone RP23-378O19, complete sequence
          Length = 223985

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   aggagaaggagaggaggaga 128
             ||||||||||||||||||||
Sbjct: 25154 aggagaaggagaggaggaga 25173
to top
>gb|AC117550.8| Mus musculus chromosome 1, clone RP24-571N3, complete sequence
          Length = 156349

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    aggagaaggagaggaggaga 128
              ||||||||||||||||||||
Sbjct: 144834 aggagaaggagaggaggaga 144815
to top
>ref|XM_795154.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC583810 (LOC583810), mRNA
          Length = 357

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 109 aggagaaggagaggaggaga 128
           ||||||||||||||||||||
Sbjct: 18  aggagaaggagaggaggaga 37
to top
>emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chromosome 13 Contains
            the Foxq1 gene for forkhead box Q1 (Hfh1l), two novel
            genes and two CpG islands, complete sequence
          Length = 187709

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 109  aggagaaggagaggaggaga 128
            ||||||||||||||||||||
Sbjct: 7410 aggagaaggagaggaggaga 7429
to top
>emb|AL138649.1|ATT14D3 Arabidopsis thaliana DNA chromosome 3, BAC clone T14D3
          Length = 88010

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                     
Query: 278   ttagacaaggaaaatttcaagttggaagaccctcttgatgaggatgaaataatcca 333
             |||||||||||| ||||||  |||||||| | | | |||||||| || ||||||||
Sbjct: 62377 ttagacaaggaagatttcactttggaagaacttttggatgaggaagacataatcca 62322
to top
>gb|AC074140.5| Homo sapiens chromosome 19 clone LLNLF-18A12, complete sequence
          Length = 37049

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 109  aggagaaggagaggaggaga 128
            ||||||||||||||||||||
Sbjct: 6771 aggagaaggagaggaggaga 6752



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 109  aggagaaggagaggaggaga 128
            ||||||||||||||||||||
Sbjct: 5385 aggagaaggagaggaggaga 5366
to top
>gb|AC100825.2| Homo sapiens chromosome 15, clone RP11-1152M12, complete sequence
          Length = 127680

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   aggagaaggagaggaggaga 128
             ||||||||||||||||||||
Sbjct: 26564 aggagaaggagaggaggaga 26545
to top
>gb|AC021553.14| Homo sapiens chromosome 15, clone RP11-709B3, complete sequence
          Length = 185596

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    aggagaaggagaggaggaga 128
              ||||||||||||||||||||
Sbjct: 185555 aggagaaggagaggaggaga 185536
to top
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020
          Length = 1824958

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    aggagaaggagaggaggaga 128
              ||||||||||||||||||||
Sbjct: 171442 aggagaaggagaggaggaga 171461
to top
>gb|AC010864.11| Homo sapiens chromosome 10 clone RP11-351D16, complete sequence
          Length = 205794

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    gggttggcttctcctcccct 30
             ||||||||||||||||||||
Sbjct: 55628 gggttggcttctcctcccct 55647
to top
>gb|AC008388.7| Homo sapiens chromosome 5 clone CTC-231O11, complete sequence
          Length = 122012

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    aggagaaggagaggaggaga 128
              ||||||||||||||||||||
Sbjct: 108400 aggagaaggagaggaggaga 108419
to top
>gb|AC023425.20| Homo sapiens 12 BAC RP11-350G2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181829

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    aggagaaggagaggaggaga 128
              ||||||||||||||||||||
Sbjct: 115452 aggagaaggagaggaggaga 115471
to top
>dbj|AK081699.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
           library, clone:C130069E24 product:unclassifiable, full
           insert sequence
          Length = 1662

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 109 aggagaaggagaggaggaga 128
           ||||||||||||||||||||
Sbjct: 49  aggagaaggagaggaggaga 30
to top
>gb|AC158518.2| Mus musculus BAC clone RP24-86K19 from chromosome 9, complete sequence
          Length = 203656

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   aggagaaggagaggaggaga 128
             ||||||||||||||||||||
Sbjct: 29991 aggagaaggagaggaggaga 30010
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      aggagaaggagaggaggaga 128
                ||||||||||||||||||||
Sbjct: 20094704 aggagaaggagaggaggaga 20094723
to top
>gb|AC011503.4|AC011503 Homo sapiens chromosome 19 clone CTB-92J24, complete sequence
          Length = 104082

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   aggagaaggagaggaggaga 128
             ||||||||||||||||||||
Sbjct: 26890 aggagaaggagaggaggaga 26909
to top
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0509B06
          Length = 104515

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 110   ggagaaggagaggaggagatccat 133
             |||| |||||||||||||||||||
Sbjct: 29694 ggaggaggagaggaggagatccat 29717
to top
>gb|AC073488.23| Homo sapiens X BAC RP11-126O22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 70393

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   aggagaaggagaggaggaga 128
             ||||||||||||||||||||
Sbjct: 53893 aggagaaggagaggaggaga 53874
to top
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0443E05
          Length = 176935

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    tcgtaggagaaggagaggag 124
              ||||||||||||||||||||
Sbjct: 151288 tcgtaggagaaggagaggag 151307
to top
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0417G05
          Length = 147803

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   tcgtaggagaaggagaggag 124
             ||||||||||||||||||||
Sbjct: 81197 tcgtaggagaaggagaggag 81216
to top
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0406H10
          Length = 156419

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 110  ggagaaggagaggaggagatccat 133
            |||| |||||||||||||||||||
Sbjct: 9922 ggaggaggagaggaggagatccat 9945
to top
>dbj|AP004005.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1188_F05
          Length = 117045

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   aggagaaggagaggaggaga 128
             ||||||||||||||||||||
Sbjct: 41250 aggagaaggagaggaggaga 41269
to top
>dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0477F03
          Length = 176120

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    aggagaaggagaggaggaga 128
              ||||||||||||||||||||
Sbjct: 166555 aggagaaggagaggaggaga 166574
to top
>dbj|AK120035.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-C08, full
           insert sequence
          Length = 1004

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 111 gagaaggagaggaggagatc 130
           ||||||||||||||||||||
Sbjct: 79  gagaaggagaggaggagatc 98
to top
>dbj|AK067029.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092P04, full
           insert sequence
          Length = 1294

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 111 gagaaggagaggaggagatc 130
           ||||||||||||||||||||
Sbjct: 114 gagaaggagaggaggagatc 133
to top
>gb|AY111977.1| Zea mays CL50557_1 mRNA sequence
          Length = 575

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 111 gagaaggagaggaggagatccatg 134
           ||||| ||||||||||||||||||
Sbjct: 171 gagaaagagaggaggagatccatg 194
to top
>dbj|AP003396.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-334E6, complete
             sequences
          Length = 191362

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   tttctgagactgtgagggag 194
             ||||||||||||||||||||
Sbjct: 87315 tttctgagactgtgagggag 87334
to top
>emb|AL954854.3|CNS08CD8 Oryza sativa chromosome 12, . BAC OSJNBa0080D17 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 159718

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    aggagaaggagaggaggaga 128
              ||||||||||||||||||||
Sbjct: 113260 aggagaaggagaggaggaga 113241
to top
>emb|AL773565.17| Mouse DNA sequence from clone RP23-76A20 on chromosome X, complete
             sequence
          Length = 132915

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   aggagaaggagaggaggaga 128
             ||||||||||||||||||||
Sbjct: 85695 aggagaaggagaggaggaga 85676
to top
>emb|AL929199.11| Mouse DNA sequence from clone RP23-458A10 on chromosome 2, complete
            sequence
          Length = 95855

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 109  aggagaaggagaggaggaga 128
            ||||||||||||||||||||
Sbjct: 5887 aggagaaggagaggaggaga 5906
to top
>gb|AC135187.3| Mus musculus BAC clone RP24-263A3 from 5, complete sequence
          Length = 176333

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    aggagaaggagaggaggaga 128
              ||||||||||||||||||||
Sbjct: 146908 aggagaaggagaggaggaga 146927
to top
>gb|AC140220.4| Mus musculus BAC clone RP23-279P6 from 5, complete sequence
          Length = 182156

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    aggagaaggagaggaggaga 128
              ||||||||||||||||||||
Sbjct: 175618 aggagaaggagaggaggaga 175599
to top
>dbj|AB209209.1| Homo sapiens mRNA for Thy-1 cell surface antigen variant protein
          Length = 2427

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 175 tttctgagactgtgagggag 194
           ||||||||||||||||||||
Sbjct: 465 tttctgagactgtgagggag 446
to top
>emb|AL672174.8| Mouse DNA sequence from clone RP23-408K4 on chromosome X, complete
             sequence
          Length = 201642

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   aggagaaggagaggaggaga 128
             ||||||||||||||||||||
Sbjct: 71534 aggagaaggagaggaggaga 71553
to top
>gb|M11749.1|HUMTHY1A Human Thy-1 glycoprotein gene, complete cds
          Length = 2806

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 175 tttctgagactgtgagggag 194
           ||||||||||||||||||||
Sbjct: 150 tttctgagactgtgagggag 131
to top
>emb|AL772185.10| Mouse DNA sequence from clone RP23-103G12 on chromosome 2, complete
              sequence
          Length = 215155

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    aggagaaggagaggaggaga 128
              ||||||||||||||||||||
Sbjct: 123233 aggagaaggagaggaggaga 123252
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>dbj|D17760.1|RICARF Oryza sativa (japonica cultivar-group) mRNA for ADP-ribosylation
           factor, complete cds
          Length = 1064

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 111 gagaaggagaggaggagatc 130
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Sbjct: 101 gagaaggagaggaggagatc 120


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,384,996
Number of Sequences: 3902068
Number of extensions: 3384996
Number of successful extensions: 82134
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81473
Number of HSP's gapped (non-prelim): 661
length of query: 360
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 338
effective length of database: 17,147,199,772
effective search space: 5795753522936
effective search space used: 5795753522936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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