Clone Information

BLAST Search Result

Clone Name	bastl47d07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	COBS_RHILO (Q98KP0) Cobalamin synthase (EC 2.-.-.-)	33	0.22
2	TRI1_STRCO (Q9RDE2) Tricorn protease homolog 1 (EC 3.4.21.-)	32	0.38
3	ENL_HUMAN (Q03111) Protein ENL	32	0.50
4	Y737_DROME (P83475) Hypothetical protein CG31737 in chromosome 2	31	0.85
5	IF2_CAUCR (Q9AC25) Translation initiation factor IF-2	31	0.85
6	TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-d...	30	1.1
7	RHG09_HUMAN (Q9BRR9) Rho-GTPase-activating protein 9	30	1.1
8	ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (T...	29	2.5
9	TGM1_HUMAN (P22735) Protein-glutamine gamma-glutamyltransferase ...	29	2.5
10	CUTL1_HUMAN (P39880) Homeobox protein cut-like 1 (CCAAT displace...	29	2.5
11	CHEB1_CAUCR (O87717) Chemotaxis response regulator protein-gluta...	29	2.5
12	IF2_CHRVO (Q7NY13) Translation initiation factor IF-2	29	3.2
13	SPEG_RAT (Q63638) Striated muscle-specific serine/threonine prot...	29	3.2
14	ATL1H_ARATH (Q9C7I1) Putative RING-H2 finger protein ATL1H precu...	29	3.2
15	CAF1A_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-...	28	4.2
16	ODO1_CAEEL (O61199) 2-oxoglutarate dehydrogenase E1 component, m...	28	4.2
17	HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hn...	28	5.5
18	TR2M_AGRRH (Q09109) Tryptophan 2-monooxygenase (EC 1.13.12.3)	28	5.5
19	CABP4_HUMAN (P57796) Calcium-binding protein 4 (CaBP4)	28	5.5
20	HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (...	28	5.5
21	HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (...	28	5.5
22	HMEN_ARTSF (Q05640) Homeobox protein engrailed	28	5.5
23	SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine pr...	28	5.5
24	IF2_BRAJA (Q89WA9) Translation initiation factor IF-2	28	5.5
25	PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing pr...	28	5.5
26	EXO84_YARLI (Q6C238) Exocyst complex component EXO84	28	5.5
27	PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing pr...	28	5.5
28	MAP4_BOVIN (P36225) Microtubule-associated protein 4 (MAP 4) (Mi...	28	7.2
29	FABD_HUMAN (Q8IVS2) Malonyl CoA-acyl carrier protein transacylas...	28	7.2
30	ODO1_CAEBR (Q623T0) 2-oxoglutarate dehydrogenase E1 component, m...	28	7.2
31	FCRL_HUMAN (Q7L513) Fc receptor-like and mucin-like 1 precursor ...	28	7.2
32	B2L12_HUMAN (Q9HB09) Bcl-2-related proline-rich protein (Bcl-2-l...	27	9.4
33	CSMD1_MOUSE (Q923L3) CUB and sushi domain-containing protein 1 p...	27	9.4
34	CSMD1_HUMAN (Q96PZ7) CUB and sushi domain-containing protein 1 p...	27	9.4
35	PSI1_SCHPO (Q09912) Protein psi1 (Protein psi)	27	9.4
36	SAFB1_RAT (O88453) Scaffold attachment factor B (Scaffold attach...	27	9.4
37	UCRIA_ORYSA (Q69S39) Cytochrome b6-f complex iron-sulfur subunit...	27	9.4
38	SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Sh...	27	9.4
39	CAC1D_CHICK (O73700) Voltage-dependent L-type calcium channel al...	27	9.4

>COBS_RHILO (Q98KP0) Cobalamin synthase (EC 2.-.-.-)|
          Length = 259

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +3

Query: 18  LAAASWVEPAPGILPPKIGTISLFSAARFGVGRG 119
           LAAA W  P  G+L   IG I   +A RFG+  G
Sbjct: 39  LAAAIWAAPVAGLLVGLIGAIVFATAERFGLAMG 72

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>TRI1_STRCO (Q9RDE2) Tricorn protease homolog 1 (EC 3.4.21.-)|
          Length = 1067

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = -1

Query: 285 TARGSGAAYRRGSVEWKYRGAGPANGLA---GARDRLLRS 175
           TARGS  A R G V W    +GPA  LA   G R+RL R+
Sbjct: 300 TARGSAVAVR-GGVHWVTHRSGPARALAATPGVRNRLPRT 338

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>ENL_HUMAN (Q03111) Protein ENL|
          Length = 559

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -2

Query: 182 SAAPPGLNPTRPGTAPFSDRIPSPDAKSSRGKK 84
           S + PG +P    ++ FSD+ P+ D  S+RG+K
Sbjct: 308 SRSAPGTSPRTSSSSSFSDKKPAKDKSSTRGEK 340

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>Y737_DROME (P83475) Hypothetical protein CG31737 in chromosome 2|
          Length = 263

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 212 FAGPAPRYFHSTLPRRYAAPEPRAVP 289
           + GP PR +    PRRY+ P PR  P
Sbjct: 194 YPGPGPRGYPGQGPRRYSCPGPRGYP 219



 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 212 FAGPAPRYFHSTLPRRYAAPEPRAVP 289
           + GP PR +    PR Y  P PR  P
Sbjct: 178 YPGPGPRGYPGRGPRGYPGPGPRGYP 203

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>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2|
          Length = 1009

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 158 PTRPGTAPFSDRIPSPDAKSSRGKKRNRPD 69
           P   G  PF+ R P PDA ++ G++  RP+
Sbjct: 225 PAPQGDRPFNQRAPRPDANANFGQRAPRPE 254

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>TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-derived tau|
            kinase)
          Length = 1321

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 28/71 (39%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -1

Query: 309  LSVRRESGTARGSGAAYRRGSVEWKYRGAGPANGLAGARDRLLRS-ATRAKPDAARN-SP 136
            ++ R +  T  GS  A      +   RG GP    AGAR    RS    A   AARN S 
Sbjct: 1188 ITSRLQLQTPPGSATAADLRPKQPPGRGLGPGRAQAGARPPAPRSPRLPASTSAARNASA 1247

Query: 135  IFRSNSLSRRQ 103
              RS SLSRR+
Sbjct: 1248 SPRSQSLSRRE 1258

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>RHG09_HUMAN (Q9BRR9) Rho-GTPase-activating protein 9|
          Length = 750

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = -1

Query: 315 RKLSVRRESGTARGSGAAYRRGSVEWKYRGAGPANGLAGARDRLLRSATRAKP 157
           R +  RRE+ T R  G+  R   +E +  G+GPA  L+   D    S   +KP
Sbjct: 439 RWVEARREAPTGRDQGSGDRENPLELRLSGSGPAE-LSAGEDEEEESELVSKP 490

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>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional|
           activator IE175) (Alpha-4 protein)
          Length = 1298

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 18/36 (50%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
 Frame = -2

Query: 197 RATG---SSAAP--PGLNPTRPGTAPFSDRIPSPDA 105
           RA G   SSAAP  PG  P  PG  P S+  P P A
Sbjct: 218 RAVGRGPSSAAPAAPGRTPPPPGPPPLSEAAPKPRA 253

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>TGM1_HUMAN (P22735) Protein-glutamine gamma-glutamyltransferase K (EC|
           2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K))
           (Transglutaminase-1) (Epidermal TGase)
          Length = 817

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 167 GLNPTRPGTAPFSDRIPSPDAKSSRGKKRN 78
           G NP +P T P  +  P PD +S RG  R+
Sbjct: 13  GGNPLQPPTTPSPEPEPEPDGRSRRGGGRS 42

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>CUTL1_HUMAN (P39880) Homeobox protein cut-like 1 (CCAAT displacement protein)|
            (CDP)
          Length = 1505

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = -2

Query: 203  PERATGSSAAPPGLNPTRPGTAPFSDRIPSPDAKSSRGKKRNRP 72
            PE A  S+AA PG  P  P +AP       P + SS      RP
Sbjct: 1417 PEDAATSAAAAPGEGPAAPSSAP-------PPSNSSSSSAPRRP 1453

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>CHEB1_CAUCR (O87717) Chemotaxis response regulator protein-glutamate|
           methylesterase of group 1 operon (EC 3.1.1.61)
          Length = 344

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
 Frame = +1

Query: 85  FFPRLDLASGEGIR-SENGAV--PGRVGFSPGGAAEEPVARS 201
           F  RLD +SG  ++ + +GA+  PG+V  +PGGA    V RS
Sbjct: 198 FAARLDRSSGAKVQEASDGALLEPGKVYVAPGGATHLEVVRS 239

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>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2|
          Length = 964

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 6/60 (10%)
 Frame = -3

Query: 169 PG*TRRGPEQPHFQIEFPLPTPNLAAEKREIVPIFGGRMPGAG------STHDAAARGRG 8
           PG   RGP         P P P  AA  +   P  GG  PG G      S  D    GRG
Sbjct: 284 PGGDNRGPRPAGAGDRGPRPAPAAAAPSQPPAPAPGGSRPGKGKKGGERSWDDNKKGGRG 343

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>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase (EC|
            2.7.11.1) (Aortic preferentially expressed protein 1)
            (APEG-1)
          Length = 3259

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 167  GLNPTRPGTAPFSDRIPSPDAKSSRGKKRNRPDLR 63
            G  P++   AP  + +PSP  +S  G    RP+LR
Sbjct: 1982 GRAPSKDQEAPSPEALPSPGQESPDGPSPRRPELR 2016

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>ATL1H_ARATH (Q9C7I1) Putative RING-H2 finger protein ATL1H precursor|
          Length = 327

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
 Frame = -1

Query: 339 RYTLLVPS---RKLSVRRESGTARGSGAAYRRGSVEWKYRGAGPANGLA-GARDRL 184
           R+TL +P    R+LS  +    AR S   YR GSV  + RG G       G+ DRL
Sbjct: 267 RFTLQLPEEVRRQLSHMKTLPQARSSREGYRSGSVGSERRGKGKEKEFGEGSFDRL 322

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>CAF1A_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-1 subunit A)|
           (Chromatin assembly factor I p150 subunit) (CAF-I 150
           kDa subunit) (CAF-Ip150)
          Length = 938

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +2

Query: 209 PFAGPAPRYFHSTLPRRYAAPEPRAVPLSRLTDSFLDGTSSVYLEELQR 355
           P   PAP   HS+      +P P + PL R+T  F+ G++      LQR
Sbjct: 278 PEGPPAPPKQHSS-----TSPFPTSTPLRRITKKFVKGSTEKNKLRLQR 321

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>ODO1_CAEEL (O61199) 2-oxoglutarate dehydrogenase E1 component, mitochondrial|
           precursor (EC 1.2.4.2) (Alpha-ketoglutarate
           dehydrogenase)
          Length = 1029

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 9/19 (47%), Positives = 16/19 (84%)
 Frame = +2

Query: 305 DSFLDGTSSVYLEELQRAW 361
           + FL+G+SS+Y+E++  AW
Sbjct: 49  EPFLNGSSSIYIEQMYEAW 67

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>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Liver regeneration-related
           protein LRRG077)
          Length = 533

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -1

Query: 297 RESGTARGSGAAYRRGSVEWKYRGA-GPANGLAGAR 193
           R +  +RG GAA  RG   +  RG  G A G+ GAR
Sbjct: 414 RGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGAR 449



 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -1

Query: 282 ARGSGAAYRRGSVEWKYRGAGPANGLAGARDR 187
           ARG G    RG+   + RGA P  G AG   R
Sbjct: 405 ARGRGGRGARGAAPSRGRGAAPPRGRAGYSQR 436

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>TR2M_AGRRH (Q09109) Tryptophan 2-monooxygenase (EC 1.13.12.3)|
          Length = 749

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 88  FPRLDLASGEGIRSENGAVPGRVGFSPGGAAEEPVARSG 204
           FP +DL    G   E+ A  GR+G+ P G  +  VA  G
Sbjct: 190 FPTVDLLYDYGKFFESCAADGRIGYFPEGVTKPKVAIIG 228

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>CABP4_HUMAN (P57796) Calcium-binding protein 4 (CaBP4)|
          Length = 275

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/41 (39%), Positives = 17/41 (41%)
 Frame = -2

Query: 191 TGSSAAPPGLNPTRPGTAPFSDRIPSPDAKSSRGKKRNRPD 69
           TG  A     NP   G  P      SP   SSR   R+RPD
Sbjct: 62  TGPEAPGSSNNPPSTGEGPAGAPPASPGPASSRQSHRHRPD 102

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>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1) (pp68)
          Length = 623

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -1

Query: 297 RESGTARGSGAAYRRGSVEWKYRGA-GPANGLAGAR 193
           R +  +RG GAA  RG   +  RG  G A G+ GAR
Sbjct: 504 RGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGAR 539



 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -1

Query: 282 ARGSGAAYRRGSVEWKYRGAGPANGLAGARDR 187
           ARG G    RG+   + RGA P  G AG   R
Sbjct: 495 ARGRGGRGARGAAPSRGRGAAPPRGRAGYSQR 526

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>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1)
          Length = 623

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -1

Query: 297 RESGTARGSGAAYRRGSVEWKYRGA-GPANGLAGAR 193
           R +  +RG GAA  RG   +  RG  G A G+ GAR
Sbjct: 504 RGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGAR 539



 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -1

Query: 282 ARGSGAAYRRGSVEWKYRGAGPANGLAGARDR 187
           ARG G    RG+   + RGA P  G AG   R
Sbjct: 495 ARGRGGRGARGAAPSRGRGAAPPRGRAGYSQR 526

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>HMEN_ARTSF (Q05640) Homeobox protein engrailed|
          Length = 349

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -2

Query: 182 SAAPPGLNPTRPGTAPFSDRIPSP 111
           SA+ PG +P RPG+A  S  + SP
Sbjct: 32  SASTPGPSPDRPGSATMSSPLSSP 55

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>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase (EC|
            2.7.11.1) (Aortic preferentially expressed protein 1)
            (APEG-1)
          Length = 3262

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -2

Query: 158  PTRPGTAPFSDRIPSPDAKSSRGKKRNRPDLR 63
            P++   AP  + +PSP  +S  G    RP+LR
Sbjct: 1985 PSKDQEAPSPEALPSPGQESPDGPSPRRPELR 2016

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>IF2_BRAJA (Q89WA9) Translation initiation factor IF-2|
          Length = 902

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
 Frame = -2

Query: 203 PERATGSSAAPPGLNPTRPGTA---PFSDRIPSPDAKSSRG 90
           P    G+ AA PG   TRPGT    P +     P A + RG
Sbjct: 192 PAPRPGAPAARPGTTTTRPGTTTARPATTTAQRPGAPAGRG 232

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>PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing protein|
           phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat
           protein phosphatase) (Pleckstrin homology
           domain-containing family E protein 1) (Suprachiasmatic
           nucleus circadian oscillatory
          Length = 1687

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
 Frame = -1

Query: 288 GTARGSGAAYRRGSVEWKYRGAGP-------ANGLAGARDRLLRSATRAKPDAARNSPIF 130
           G A G+G   RRG+ +    GA P       AN L   R RL R+ + A   ++ +SP  
Sbjct: 65  GRAGGTGRRRRRGAPQPAAGGAAPVPAAGGGANSLLLKRGRLKRNLSAAAAASSSSSPSS 124

Query: 129 RSNS 118
            S++
Sbjct: 125 ASSA 128

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>EXO84_YARLI (Q6C238) Exocyst complex component EXO84|
          Length = 657

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -3

Query: 145 EQPHFQIEFPLPTPNLAAEKREIVPI-----FGGRMPGAGSTHDAAA 20
           ++P+ Q    L  PN+  + RE V       F  R+PG G  +DAAA
Sbjct: 29  QKPYIQDSTHLQLPNVGDKDRERVGNMVKRRFSARIPGQGVPYDAAA 75

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>PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing protein|
           phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat
           protein phosphatase) (Pleckstrin homology
           domain-containing family E protein 1) (Suprachiasmatic
           nucleus circadian oscillatory
          Length = 1717

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = -1

Query: 288 GTARGSGAAYRRGSVEWKYRGAGPANGLAGARDRLLRSATRAKPDAARNSPIFRSNSLS 112
           G A G+G   RRG+ +    GA P  G  G  + LL    R K + +  +    S+S S
Sbjct: 85  GRAGGAGRRRRRGAPQPIAGGAAPVPGAGGGANSLLLRRGRLKRNLSAAAAAASSSSSS 143

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>MAP4_BOVIN (P36225) Microtubule-associated protein 4 (MAP 4)|
           (Microtubule-associated protein-U) (MAP-U)
          Length = 1072

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
 Frame = -2

Query: 194 ATGSSAAPPGLNP----TRPGTAPFSDRIPSPDAKSSRGKKRNRP 72
           A+GS  A P   P    +RP T P  D  P P A++   +KR  P
Sbjct: 691 ASGSVPAAPPKRPAAATSRPSTLPSKDTKPKPVAEAKIPEKRVSP 735

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>FABD_HUMAN (Q8IVS2) Malonyl CoA-acyl carrier protein transacylase,|
           mitochondrial precursor (EC 2.3.1.39) (MCT)
           (Mitochondrial malonyltransferase)
          Length = 390

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 19/43 (44%), Positives = 25/43 (58%)
 Frame = -1

Query: 279 RGSGAAYRRGSVEWKYRGAGPANGLAGARDRLLRSATRAKPDA 151
           RG GA+YRRG+  +     G A G+A     LLR AT A+ +A
Sbjct: 12  RGLGASYRRGASSFPVPPPG-AQGVA----ELLRDATGAEEEA 49

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>ODO1_CAEBR (Q623T0) 2-oxoglutarate dehydrogenase E1 component, mitochondrial|
           precursor (EC 1.2.4.2) (Alpha-ketoglutarate
           dehydrogenase)
          Length = 1027

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 278 RAVPLSRLTDSFLDGTSSVYLEELQRAW 361
           ++V  S   + FL+G+SSVY+E++   W
Sbjct: 41  QSVAASVKHEPFLNGSSSVYIEQMYETW 68

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>FCRL_HUMAN (Q7L513) Fc receptor-like and mucin-like 1 precursor (Fc receptor|
           homolog expressed in B-cells) (Fc receptor related
           protein X) (FcRX) (Fc receptor-like protein)
          Length = 359

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
 Frame = -2

Query: 197 RATGSSAAPPGLNP-----TRPGTAPFSDRIPSP 111
           +   SSAAPP LNP       PGTAP  +  P P
Sbjct: 261 QGASSSAAPPTLNPAPQKSAAPGTAP--EEAPGP 292

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>B2L12_HUMAN (Q9HB09) Bcl-2-related proline-rich protein (Bcl-2-like 12 protein)|
          Length = 334

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -1

Query: 261 YRRGSVEWKYR--GAGPANGLAGARDRLLRSAT 169
           +RR  VEW+ R  G GP   +AG+ +  LR  T
Sbjct: 65  WRRPQVEWRRRRWGPGPGASMAGSEELGLREDT 97

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>CSMD1_MOUSE (Q923L3) CUB and sushi domain-containing protein 1 precursor (CUB and|
            sushi multiple domains protein 1)
          Length = 3564

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 88   FPRLDLASGEGIRSENGAVPGRVGFSPGGAAEEPVAR 198
            FPR D   G  + S+NG +     +SPG   E P+ +
Sbjct: 2139 FPRCDAPCGYNVTSQNGTI-----YSPGFPDEYPILK 2170

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>CSMD1_HUMAN (Q96PZ7) CUB and sushi domain-containing protein 1 precursor (CUB and|
            sushi multiple domains protein 1)
          Length = 3565

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 88   FPRLDLASGEGIRSENGAVPGRVGFSPGGAAEEPVAR 198
            FPR D   G  + S+NG +     +SPG   E P+ +
Sbjct: 2140 FPRCDAPCGYNVTSQNGTI-----YSPGFPDEYPILK 2171

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>PSI1_SCHPO (Q09912) Protein psi1 (Protein psi)|
          Length = 379

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +1

Query: 97  LDLASGEGIRSENGAVPGRVGFSPGGAAEEPVARSGEP 210
           +D+  G G R+  G +PG      GG    P AR   P
Sbjct: 153 MDMDGGFGTRTRGGGMPGGFANMFGGGGAGPHARRSHP 190

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>SAFB1_RAT (O88453) Scaffold attachment factor B (Scaffold attachment factor|
           B1) (SAF-B)
          Length = 931

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 109 SGEGIRSENGAVPGRVGFSPGGAAEEPVARSG 204
           SG G     G + GR  F+PGGA+   V   G
Sbjct: 884 SGPGHMMNRGGMSGRGSFAPGGASRRHVIPRG 915

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>UCRIA_ORYSA (Q69S39) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 225

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -1

Query: 219 PANGLAGARDRLLRSATRAKPDAARNSPIFRSNSLSRRQI 100
           P  GL   R+R+ R+AT     AA + P  R   + +RQ+
Sbjct: 25  PVKGLGFGRERVPRTATTITCQAASSIPADRVPDMGKRQL 64

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>SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Shank3)|
           (Proline-rich synapse associated protein 2) (ProSAP2)
           (SPANK-2)
          Length = 1815

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = -3

Query: 151 GPEQPHFQIEFPLPTPNLAAEKREIVPIFGGRMPGAGSTHDAAARGRG 8
           GPE+    +   +P      E  ++  +  GR P + S  D    GRG
Sbjct: 839 GPEKLPGSLRKGIPRTKSVGEDEKLASLLEGRFPRSTSMQDTVREGRG 886

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>CAC1D_CHICK (O73700) Voltage-dependent L-type calcium channel alpha-1D subunit|
            (Voltage-gated calcium channel alpha subunit Cav1.3)
            (CHCACHA1D)
          Length = 2190

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -2

Query: 203  PERATGSSAAPPGLNPTRPGTAPFSDRIPSPDAKSSRGKKRNRPDLRWKNAW 48
            P R+T S A PP   P R  T  ++  I    A+S+     + P L  +++W
Sbjct: 2003 PSRSTRSWATPPATPPNRDHTPYYTPLIQVDRAESTEHMNGSLPSLH-RSSW 2053


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,997,516
Number of Sequences: 219361
Number of extensions: 985153
Number of successful extensions: 4868
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 4374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4859
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result