ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl47d02 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 133 bits (334), Expect = 1e-31 Identities = 64/94 (68%), Positives = 78/94 (82%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GG++ LTG + A LKG+VVLMRKN LD NDFGAT++DG+ E LG+GVTCQLISST V Sbjct: 3 LGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAV 62 Query: 254 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENK 355 D +NGGRGKVGAEA LEQW+ T+LP +TTGE+K Sbjct: 63 DQDNGGRGKVGAEAELEQWV--TSLPSLTTGESK 94
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 130 bits (326), Expect = 1e-30 Identities = 65/94 (69%), Positives = 79/94 (84%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GGI+ LTG + A LKGS+VLMRKNALD NDFGATV+DG++E LGRGVTCQL+SS+ V Sbjct: 2 LGGIIGGLTGN-KNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSLV 60 Query: 254 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENK 355 D NNG RG+VG EA+LEQWL T+LP +TTGE+K Sbjct: 61 DPNNGNRGRVGTEASLEQWL--TSLPSLTTGESK 92
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 129 bits (323), Expect = 2e-30 Identities = 63/94 (67%), Positives = 78/94 (82%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GGI+ +TG + + LKG+VVLMRKN LD NDFGATV+DG+ E LG+GVTCQLISST V Sbjct: 2 LGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTAV 61 Query: 254 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENK 355 D NNG RGKVGAEA+LEQW L ++LP +TTGE++ Sbjct: 62 DPNNGNRGKVGAEASLEQW-LTSSLPSLTTGESR 94
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 87.0 bits (214), Expect = 1e-17 Identities = 47/94 (50%), Positives = 63/94 (67%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GG+ LTG G +KG VLM + LD DF A+++D V E+ G +TCQL+S+T Sbjct: 2 LGGLKDKLTGK-NGNKIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATVA 60 Query: 254 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENK 355 D NN GRG VG+EANLEQ L T+LP ++ GE+K Sbjct: 61 DQNNEGRGIVGSEANLEQGL--TDLPSVSQGESK 92
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 78.2 bits (191), Expect = 5e-15 Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 3/89 (3%) Frame = +2 Query: 95 LTGG---LRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNN 265 LTGG +KG+VVLM+KN LDFNDF A+ +D + E LG +T +L+SS D N Sbjct: 9 LTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVSSDVTDSEN 68 Query: 266 GGRGKVGAEANLEQWLLPTNLPFITTGEN 352 G +GK+G A+LE W+ T + +T GE+ Sbjct: 69 GSKGKLGKAAHLEDWI--TTITSLTAGES 95
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 71.2 bits (173), Expect = 6e-13 Identities = 44/94 (46%), Positives = 61/94 (64%), Gaps = 1/94 (1%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLIS-STN 250 +GGIV + G +KG V+LM+KN LDF + GA+V+DG+++LLG+ V+ QLIS S N Sbjct: 3 LGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISGSVN 62 Query: 251 VDHNNGGRGKVGAEANLEQWLLPTNLPFITTGEN 352 D G GK+ A LE WL T++ IT GE+ Sbjct: 63 YD---GLEGKLSNPAYLESWL--TDITPITAGES 91
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 66.6 bits (161), Expect = 1e-11 Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 5/83 (6%) Frame = +2 Query: 83 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 247 ++ L GGL G H +KG+VV+M+KNALDF D ++ D + E LG+ V+ QLISS Sbjct: 1 MLGQLVGGLIGGHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSV 60 Query: 248 NVDHNNGGRGKVGAEANLEQWLL 316 D NG +GK A LE +LL Sbjct: 61 QSDPANGLQGKHSNPAYLENFLL 83
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 61.2 bits (147), Expect = 6e-10 Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 6/84 (7%) Frame = +2 Query: 74 VGGIVSDLTGGLRGA----HLKGSVVLMRKNALDFNDFGATVMDGVTELLGR--GVTCQL 235 V G LTG + A ++G+ VL++K+ L DF A+++DGV +LG GV +L Sbjct: 3 VQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAFRL 62 Query: 236 ISSTNVDHNNGGRGKVGAEANLEQ 307 +S+T D +NGGRGK+G A+LE+ Sbjct: 63 VSATARDPSNGGRGKLGKPAHLEE 86
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 60.5 bits (145), Expect = 1e-09 Identities = 44/106 (41%), Positives = 59/106 (55%), Gaps = 19/106 (17%) Frame = +2 Query: 92 DLTGGLRGAH-LKGSVVLMRKNALDFN--------------DFGATV----MDGVTELLG 214 ++TG L H ++G+VVLMRKN LDFN D G + +DG+T LG Sbjct: 4 NVTGLLNKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLG 63 Query: 215 RGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGEN 352 R V+ QLIS+T D N G+GKVG + LE L +LP + GE+ Sbjct: 64 RSVSLQLISATKSDAN--GKGKVGKDTFLEGVL--ASLPTLGAGES 105
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 58.2 bits (139), Expect = 5e-09 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 5/82 (6%) Frame = +2 Query: 83 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 247 ++ +T GL G H +KG+VV+M KN LDF D ++ + ++LG+ V+ QLISS Sbjct: 1 MIGQITSGLFGGHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSV 60 Query: 248 NVDHNNGGRGKVGAEANLEQWL 313 D NG +GK A LE L Sbjct: 61 QGDPTNGLQGKHSNPAYLENSL 82
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 57.0 bits (136), Expect = 1e-08 Identities = 36/80 (45%), Positives = 50/80 (62%) Frame = +2 Query: 113 GAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAE 292 G +KG+VVLM KN L+ N G+ V D + LGR V+ QLIS+T D + G+GKVG + Sbjct: 5 GHKIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAH--GKGKVGKD 61 Query: 293 ANLEQWLLPTNLPFITTGEN 352 LE + T+LP + GE+ Sbjct: 62 TFLEG--INTSLPTLGAGES 79
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 57.0 bits (136), Expect = 1e-08 Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 19/115 (16%) Frame = +2 Query: 65 MFGVGGIVSDLTGGLRGAH-LKGSVVLMRKNALDFNDFG------------------ATV 187 MF V G+ L G G H +KG+VVLMRKN LDFN + Sbjct: 1 MFSVPGVSGILNRG--GGHKIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGST 58 Query: 188 MDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGEN 352 +D +T LGR V QLIS+T N G+GKVG + LE ++ +LP + GE+ Sbjct: 59 LDNLTAFLGRSVALQLISATKPLAN--GKGKVGKDTFLEGIIV--SLPTLGAGES 109
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 55.8 bits (133), Expect = 2e-08 Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 15/101 (14%) Frame = +2 Query: 95 LTGGL--RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVTC 229 + GGL RG +KG+VVLMRKN L N D + +D +T LGR V+ Sbjct: 1 MLGGLLHRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRPVSL 60 Query: 230 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGEN 352 QLIS+T D N G+GK+G LE + T+LP + G++ Sbjct: 61 QLISATKADAN--GKGKLGKATFLEG--IITSLPTLGAGQS 97
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 54.7 bits (130), Expect = 6e-08 Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 14/102 (13%) Frame = +2 Query: 89 SDLTGGL-RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVT 226 S +TG L RG +KG+VVLMRKN LD N D + +D +T LGR V+ Sbjct: 3 SGVTGILNRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVS 62 Query: 227 CQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGEN 352 QLIS+T D G+GK+G LE + ++LP + G++ Sbjct: 63 LQLISATKPDAT--GKGKLGKATFLEG--IISSLPTLGAGQS 100
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 52.0 bits (123), Expect = 4e-07 Identities = 37/95 (38%), Positives = 46/95 (48%), Gaps = 24/95 (25%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 223 +G +KG+VVLM KN LDFN + V+D T LGR + Sbjct: 7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNI 66 Query: 224 TCQLISSTNVDHNNGGRGKVGAEANLEQWL--LPT 322 + QLIS+T D G GKVG E LE+ L LPT Sbjct: 67 SMQLISATQTD--GSGNGKVGKEVYLEKHLPTLPT 99
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 52.0 bits (123), Expect = 4e-07 Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 22/90 (24%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 223 RG +KG+VVLM KN DFN+F +T ++DG T + R + Sbjct: 7 RGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRNI 66 Query: 224 TCQLISSTNVDHNNGGRGKVGAEANLEQWL 313 QLIS+T D G GKVG + LE+ L Sbjct: 67 AIQLISATKTD--GLGNGKVGKQTFLEKHL 94
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 48.9 bits (115), Expect = 3e-06 Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 20/94 (21%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFN--------------------DFGATVMDGVTELLGRGVTC 229 RG LKG+V+LM+KN LD N +++D T LGR V Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 230 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLP 331 +LIS+T D + G+GKV EA LE L T++P Sbjct: 68 RLISATVADAS--GKGKVSKEAFLEGLL--TSIP 97
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 44.3 bits (103), Expect = 7e-05 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 13/95 (13%) Frame = +2 Query: 104 GLRGAHLKGSVVLMRKNALDFND-------------FGATVMDGVTELLGRGVTCQLISS 244 G +G +KG++V+M+KN LD N F + +D +T ++ QLIS+ Sbjct: 5 GQKGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLGFIGSAVDALT-FAATKISIQLISA 63 Query: 245 TNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGE 349 T D GG+GK+G NL + LP + GE Sbjct: 64 TKAD---GGKGKIGKSTNLRGKI---TLPTLGAGE 92
>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 35.4 bits (80), Expect = 0.035 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Frame = -2 Query: 273 RPPLLWSTLVELMSWQVTPRPRSSVT-----PSMTVAPKSLKSSAFLRMRTTEPLRWAPR 109 R P L++ L S PRPRS+ PS AP + + R+ PL W P+ Sbjct: 228 RSPDLFTPLSRPPSPLSLPRPRSAPARRPPAPSGDTAPPARPHTPLSRIDVRPPLDWGPQ 287 Query: 108 RPPVRSLTMPPTP 70 R ++L+ PPTP Sbjct: 288 R---QTLSRPPTP 297
>YAI7_SCHPO (Q09894) Hypothetical protein C24B11.07c in chromosome I| Length = 561 Score = 34.7 bits (78), Expect = 0.059 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = -2 Query: 318 GRSHCSRFASAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMR 139 G+ + R SAP+ + + + ++++S RS +PS+ +SLKS R Sbjct: 374 GKPNMGRIPSAPSLSKGRAMTADNMDMLSLTTRRSRRSLYSPSLMQMQQSLKSDYEGLGR 433 Query: 138 TTEPLRWAPR-RPPVR 94 T +P R+APR PPVR Sbjct: 434 TFDP-RFAPRGSPPVR 448
>Y1051_BORPA (Q7WBF2) UPF0178 protein BPP1051| Length = 160 Score = 31.6 bits (70), Expect = 0.50 Identities = 13/16 (81%), Positives = 13/16 (81%) Frame = +1 Query: 262 QRWAREGGRGGKPGAV 309 QRWAR G GGKPGAV Sbjct: 145 QRWARTRGAGGKPGAV 160
>MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domains 9 precursor| (EGF-like domain-containing protein 5) (Multiple EGF-like domain protein 5) Length = 600 Score = 31.2 bits (69), Expect = 0.66 Identities = 21/70 (30%), Positives = 30/70 (42%) Frame = -2 Query: 309 HCSRFASAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTE 130 H S P+ P P L ST+ + + V ++S TP A +SS + T Sbjct: 128 HTPTTESPPSRPAPTTLASTVGQPPTTSVVTTAQASSTPGTPTAESPDRSSNSSGVPPTA 187 Query: 129 PLRWAPRRPP 100 P+ AP PP Sbjct: 188 PVTEAPTSPP 197
>HUNB_DROIK (O46242) Protein hunchback (Fragments)| Length = 193 Score = 28.5 bits (62), Expect(2) = 0.82 Identities = 17/68 (25%), Positives = 34/68 (50%) Frame = -2 Query: 273 RPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVR 94 RPP L + + +M + P P ++ T + T A S ++A + +++ + L+ P Sbjct: 101 RPPGLPNPMQTIMPANMRPSPTATTTATTTAAAASTTTAATVALQSNDKLQ---ALTPPM 157 Query: 93 SLTMPPTP 70 +T P +P Sbjct: 158 DVTPPKSP 165 Score = 21.2 bits (43), Expect(2) = 0.82 Identities = 7/23 (30%), Positives = 16/23 (69%) Frame = -1 Query: 334 ERQVRRQEPLLQVCLRAHLPAPT 266 ++Q ++Q+P+ +C A P+P+ Sbjct: 70 QQQQQQQQPMDTLCAGAMTPSPS 92
>UL14_EHV1V (P84404) Hypothetical gene 48 protein| Length = 317 Score = 30.8 bits (68), Expect = 0.86 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -1 Query: 184 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGECGTLAKLARCGA 8 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>UL14_EHV1B (P28949) Hypothetical gene 48 protein| Length = 317 Score = 30.8 bits (68), Expect = 0.86 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -1 Query: 184 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGECGTLAKLARCGA 8 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>USH1C_MOUSE (Q9ES64) Harmonin (Usher syndrome type-1C protein homolog) (PDZ| domain-containing protein) Length = 910 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/54 (35%), Positives = 26/54 (48%) Frame = -2 Query: 225 VTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTPNI 64 V P P S +PS AP L SS + ++ W R PP + +PP P+I Sbjct: 563 VMPHPPSVNSPSKVPAPPVLPSSGHVSSSSSP---WVQRTPP--PIPIPPPPSI 611
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 30.0 bits (66), Expect = 1.5 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = -2 Query: 282 TFPRPPLLWSTLVELMSWQVTPRPRSSVT--PSMTVAPKSLKSSAFLRMRTTEPLRWAPR 109 T P PP M+ +TP P S+ T P+ T +P + ++ T P P Sbjct: 1498 TTPSPP---------MTTPITP-PASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPI 1547 Query: 108 RPPVRSLTMPPT 73 PP + T+PPT Sbjct: 1548 TPPTSTTTLPPT 1559 Score = 29.6 bits (65), Expect = 1.9 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Frame = -2 Query: 282 TFPRPPLLWSTLVELMSWQVTPRPRSSVT----PSMTVAPKSLKSSAFLRMRTTEPLRWA 115 T P PP + +T + TP P ++ T P+ T +P + TT P Sbjct: 1584 TTPSPPTITTTTPPPTT---TPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTT 1640 Query: 114 PRRPPVRSLTMPPT 73 P PP + T PPT Sbjct: 1641 PSPPPTTTTTPPPT 1654 Score = 29.3 bits (64), Expect = 2.5 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = -2 Query: 282 TFPRPPLLWSTLVELMSWQVTPRPRSSVT--PSMTVAPKSLKSSAFLRMRTTEPLRWAPR 109 T P PP+ +T + TP P ++ P+ T +P + ++ T P P Sbjct: 1452 TTPSPPISTTTTPPPTT---TPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPI 1508 Query: 108 RPPVRSLTMPPT 73 PP + T+PPT Sbjct: 1509 TPPASTTTLPPT 1520
>TRPM2_HUMAN (O94759) Transient receptor potential cation channel subfamily M| member 2 (EC 3.6.1.13) (Long transient receptor potential channel 2) (LTrpC2) (LTrpC-2) (Transient receptor potential channel 7) (TrpC7) (Estrogen-responsive element-associated Length = 1503 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +2 Query: 140 LMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 247 LM+K AL F+DF + G L G+TC+LI +T Sbjct: 856 LMKKAALYFSDFWNKLDVGAILLFVAGLTCRLIPAT 891
>IWS1_XENTR (Q505H7) IWS1-like protein| Length = 909 Score = 29.6 bits (65), Expect = 1.9 Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Frame = -1 Query: 187 DGGAEVVEVERVLAHEDDG-----ALEVGAPEAPRQVAH-DAADAKHLRSISG 47 DGGA V+ ER A +D+G E G+PE + H D D KH RS SG Sbjct: 15 DGGATPVQDERDSASDDEGNEREQRSEPGSPERQSEDEHSDIEDNKH-RSDSG 66
>NPAS3_HUMAN (Q8IXF0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 933 Score = 29.6 bits (65), Expect = 1.9 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -2 Query: 222 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 133 TP P S +PS+ +L+ S F+RM++T Sbjct: 241 TPEPVESTSPSLLTTDNTLERSFFIRMKST 270
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 29.3 bits (64), Expect = 2.5 Identities = 22/74 (29%), Positives = 30/74 (40%) Frame = -2 Query: 288 APTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPR 109 AP PP + + V M V +P SSV P+ T +L S P AP+ Sbjct: 1480 APVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPA-TAPSSTLPPSQSSFAHVPSPAPPAPQ 1538 Query: 108 RPPVRSLTMPPTPN 67 P +L+ P N Sbjct: 1539 HPSAAALSSAPADN 1552
>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)| Length = 283 Score = 29.3 bits (64), Expect = 2.5 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Frame = -2 Query: 285 PTFPRP-PLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPR 109 P P+P P ++ + S P P++S P+ T +PK T+P + Sbjct: 84 PATPKPTPPTYTPSPKPKSPVYPPPPKASTPPTYTPSPKP---------PATKPPTYPTP 134 Query: 108 RPPVRSLTMPPTPNIF 61 +PP T PPTP ++ Sbjct: 135 KPPA---TKPPTPPVY 147
>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)| Length = 1431 Score = 28.9 bits (63), Expect = 3.3 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Frame = -2 Query: 285 PTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPL-RWAPR 109 PT + PL E+ TP P S P APK +K+ A L + P +P Sbjct: 1245 PTSKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPA 1304 Query: 108 RPPVRSLTMPP 76 R P +L PP Sbjct: 1305 RQPPAALAKPP 1315
>IWS1A_XENLA (Q6DE96) IWS1-like protein A| Length = 836 Score = 28.9 bits (63), Expect = 3.3 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%) Frame = -1 Query: 187 DGGAEVVEVERVLAHEDDG---ALEVGAPEAPRQVAH-DAADAKH 65 DGGA V+ ER A +D+G E G+PE + H D D KH Sbjct: 13 DGGATPVQDERDSASDDEGNEQRSEPGSPEHQSEDEHSDVEDHKH 57
>PYRH_DEIRA (Q9RU81) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 245 Score = 28.9 bits (63), Expect = 3.3 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +2 Query: 44 LPRDRAKMFGVGG----IVSDLTGGLRGAHLKGSVVLMRKNALD 163 L + R +FG G +D T LR + VVLM KNA+D Sbjct: 127 LEKGRVVIFGGGNGAPFFTTDTTSTLRALEIGADVVLMAKNAVD 170
>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)| Length = 279 Score = 28.9 bits (63), Expect = 3.3 Identities = 19/51 (37%), Positives = 20/51 (39%) Frame = -2 Query: 222 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTP 70 TP P S TPS T P S T P P P S T PP+P Sbjct: 136 TPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSP---TPTPSPTPSPTPPPSP 183 Score = 28.1 bits (61), Expect = 5.6 Identities = 24/73 (32%), Positives = 25/73 (34%) Frame = -2 Query: 285 PTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRR 106 P P TL S TP P S TPS T P S T P P Sbjct: 75 PALSPTPTPSPTLSPTPSPTPTPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTP-TPSP 133 Query: 105 PPVRSLTMPPTPN 67 P S T PTP+ Sbjct: 134 TPTPSPTPSPTPS 146 Score = 27.3 bits (59), Expect = 9.5 Identities = 24/72 (33%), Positives = 25/72 (34%) Frame = -2 Query: 285 PTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRR 106 PT P T +S TP P S TPS T P S T P P Sbjct: 61 PTPTPTPTPSPTPTPALSPTPTPSPTLSPTPSPTPTPSPTPSPTPSPTPTPSP---TPSP 117 Query: 105 PPVRSLTMPPTP 70 P S T PTP Sbjct: 118 TPTPSPTPSPTP 129
>NPAS3_MOUSE (Q9QZQ0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 925 Score = 28.5 bits (62), Expect = 4.3 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -2 Query: 222 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 133 TP P + +PS+ +L+ S F+RM++T Sbjct: 246 TPEPVETTSPSLLTTDNTLERSFFIRMKST 275
>MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)| Length = 1971 Score = 28.5 bits (62), Expect = 4.3 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 Query: 219 PRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRS 91 P P SS TP++ V P + ++ L +T+P P+ PV S Sbjct: 1026 PPPASSATPALHVQPLAPAAAPSLLQASTQPEVLLPKPAPVYS 1068
>GLGC_ERWCT (Q6CZK2) Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)| (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) Length = 425 Score = 28.5 bits (62), Expect = 4.3 Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 8/102 (7%) Frame = +2 Query: 59 AKMFGVGGIVSDLTGGLRGAHLKGSVVLMRKNALDFN------DFGAT--VMDGVTELLG 214 A+ + + L GG RG LKG L K A+ F DF + + G+ + Sbjct: 13 ARQLPLKSVALILAGG-RGTRLKGLTALRAKPAVHFGGKFRIIDFALSNCLNSGIRRI-- 69 Query: 215 RGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFIT 340 GV Q S T V H G + AE N LLP + T Sbjct: 70 -GVITQYQSHTLVQHIQRGWSFLNAEMNEFVDLLPAQQRYST 110
>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT) Length = 1616 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -1 Query: 115 APEAPRQVAHDAADAKHLRSISGECG 38 AP AP++ AAD H+ S G CG Sbjct: 74 APPAPQKPTQQAADLNHILSERGACG 99
>PCD15_MOUSE (Q99PJ1) Protocadherin-15 precursor| Length = 1943 Score = 28.1 bits (61), Expect = 5.6 Identities = 23/74 (31%), Positives = 33/74 (44%) Frame = -2 Query: 285 PTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRR 106 P PRPP+ ++T +S P P VT S+ P S ++ L + L PR Sbjct: 1754 PPLPRPPIAFTTFPLPLS-PPNPPPPQLVTFSL---PISTPPTSSLPLPPPLSLPPPPRP 1809 Query: 105 PPVRSLTMPPTPNI 64 P R PP+ +I Sbjct: 1810 PAPRLFPQPPSTSI 1823
>PE55_LUCCU (Q95UE8) Peritrophin-55 precursor| Length = 220 Score = 28.1 bits (61), Expect = 5.6 Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 9/88 (10%) Frame = -2 Query: 306 CSRFASAPTFPR---------PPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSA 154 C F APT PL+ T + + TP S TP +T AP S + Sbjct: 84 CDNFIPAPTCEYLKQTTDVECVPLVKPTTAAPTTLKTTP---SKTTPIVTTAPPSTPVPS 140 Query: 153 FLRMRTTEPLRWAPRRPPVRSLTMPPTP 70 + +P +PP + T+ P+P Sbjct: 141 TIVTNKPDPTTPKTTKPPKVTTTVNPSP 168
>CI079_HUMAN (Q6ZUB1) Protein C9orf79| Length = 1445 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Frame = -2 Query: 243 ELMSWQVTPRPR-SSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRS--LTMPPT 73 E + W + RP+ V PS+ +++ S + P W+P+ P+ +T P Sbjct: 565 EYLEWPLKKRPKWKRVLPSLLKKSQAVLSQPTAHLPQERPASWSPKSAPILPGVVTSPEL 624 Query: 72 P 70 P Sbjct: 625 P 625
>TBX10_MOUSE (Q810F8) T-box transcription factor TBX10 (T-box protein 10)| Length = 385 Score = 27.7 bits (60), Expect = 7.3 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Frame = -2 Query: 234 SWQVTPRPRSSV--TPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTPNI 64 SW VTPRP S+ +++P LK SA T++ + R P + P P++ Sbjct: 257 SWPVTPRPLLSIPARSRSSLSPCLLKGSAEREKDTSKASASSSRTPTQPHNQLLPAPDV 315
>POLR_KYMVJ (P36304) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1874 Score = 27.7 bits (60), Expect = 7.3 Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 2/78 (2%) Frame = -2 Query: 291 SAPTFPRPPLLWSTLVELMSWQVTPR-PRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWA 115 SA P PLL EL P P S + PKS S P A Sbjct: 647 SAQPTPGEPLLAPPTTELKPESSNPNNPNPSSSAGSNPPPKSSSSD-------NPP---A 696 Query: 114 PRRP-PVRSLTMPPTPNI 64 P +P P S T PP+PN+ Sbjct: 697 PNKPTPTSSSTTPPSPNL 714 Score = 27.7 bits (60), Expect = 7.3 Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 4/79 (5%) Frame = -2 Query: 291 SAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPS--MTVAPKSLKSSAFLRMRTTEPLRW 118 S+P FP PP L + L T P + TP + P + P Sbjct: 620 SSPLFPPPPPLPPSQPPLSQGPATQAPSAQPTPGEPLLAPPTTELKPESSNPNNPNPSSS 679 Query: 117 APRRPPVRSLTM--PPTPN 67 A PP +S + PP PN Sbjct: 680 AGSNPPPKSSSSDNPPAPN 698
>PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte| stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part] Length = 1404 Score = 27.7 bits (60), Expect = 7.3 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Frame = -2 Query: 291 SAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTV---APKSLKSSAFLRMRTTEPLR 121 SAPT P+ P +T + P P ++ P+ T AP + K A T P + Sbjct: 388 SAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPA-----PTTPKK 442 Query: 120 WAPRRPPVRSLTMP--PTP 70 AP P + T P PTP Sbjct: 443 PAPTTPKEPAPTTPKEPTP 461
>PRP45_EMENI (Q5AU50) Pre-mRNA-splicing factor prp45 (Pre-mRNA-processing| protein 45) Length = 583 Score = 27.3 bits (59), Expect = 9.5 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +2 Query: 50 RDRAKMFGVGGIVSDLTGGLRGAHLK 127 +D A FG+ +++D+TGG GA K Sbjct: 535 KDTADPFGIDSMIADVTGGAGGAGQK 560
>NU2M_TETNG (Q4JQI6) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 348 Score = 27.3 bits (59), Expect = 9.5 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = -2 Query: 210 RSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTPNI 64 R S ++T+AP +L + R +TT+P L +P TP I Sbjct: 294 RLSYAMTLTIAPNNLTGTLPWRTQTTQPNMMTATMAASSILLLPMTPGI 342
>IF2_SYNY3 (P72689) Translation initiation factor IF-2| Length = 1001 Score = 27.3 bits (59), Expect = 9.5 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Frame = -2 Query: 288 APTFPRPPLLWSTLVELMSWQVTPR--PRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWA 115 APT P+PP+ ++ ++ + + P+S P+ +AP + S + P A Sbjct: 114 APTPPQPPVAKASAPKIQKQEEPAQEAPKSVAPPTQPLAPPPVPSLQSPPSKPAPPTPPA 173 Query: 114 PRRPPVRSLTMPP 76 + P L PP Sbjct: 174 KKAAPAPRLAGPP 186
>ATP7A_MOUSE (Q64430) Copper-transporting ATPase 1 (EC 3.6.3.4) (Copper pump 1)| (Menkes disease-associated protein homolog) Length = 1491 Score = 27.3 bits (59), Expect = 9.5 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 8/72 (11%) Frame = +2 Query: 38 ATLPRDRAKMFGVGGIVSDLTGGLRGAHLKGSVVLMRKNALDFND--FGATVMD------ 193 A + R+ + G+ ++ LT G +V+ R A + FGA VM+ Sbjct: 495 ANIERNLRREEGIYSVLVALTAGKAEVRYNPAVIQPRVIAEFIRELGFGAMVMENAGEGN 554 Query: 194 GVTELLGRGVTC 229 G+ EL+ RG+TC Sbjct: 555 GILELVVRGMTC 566
>HUNB_DROYA (O62541) Protein hunchback| Length = 759 Score = 27.3 bits (59), Expect = 9.5 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Frame = -2 Query: 270 PPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRT-TEPLRWAPRRPPVR 94 PP L + + + P P+ + T + TVAP ++ + + +++ T P+ P + P + Sbjct: 133 PPGLPNPMQHFYGGNLRPSPQPTPTSASTVAPVAVATGSSEKLQALTPPMDVTPPKSPAK 192 Query: 93 S 91 S Sbjct: 193 S 193
>FKBP2_PODAN (Q86ZF2) FK506-binding protein 2 precursor (EC 5.2.1.8)| (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) Length = 185 Score = 27.3 bits (59), Expect = 9.5 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 3/36 (8%) Frame = -2 Query: 255 STLV---ELMSWQVTPRPRSSVTPSMTVAPKSLKSS 157 STLV EL+ + P+P S VT S T AP+S S+ Sbjct: 117 STLVFETELVGIEGVPKPESIVTKSATDAPESTASA 152
>GUNA_CALSA (P22534) Endoglucanase A precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase A) (Cellulase A) Length = 1742 Score = 27.3 bits (59), Expect = 9.5 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Frame = -2 Query: 225 VTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWA---PRRPPVRSLTMPPTP 70 V+P P +SVTP+ T P + + T P A P P + T+ PTP Sbjct: 641 VSPTPTASVTPTPTPTPTATPTPTPTPTVTPTPTVTATPTPTPTPTSTPTVTPTP 695
>FLT3L_HUMAN (P49771) SL cytokine precursor (Fms-related tyrosine kinase 3| ligand) (Flt3 ligand) (Flt3L) Length = 235 Score = 27.3 bits (59), Expect = 9.5 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 14/48 (29%) Frame = -2 Query: 294 ASAPTFPRPPLLWSTLVEL----------MSWQ----VTPRPRSSVTP 193 A+APT P+PPLL L+ + + WQ TPRP V P Sbjct: 176 ATAPTAPQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPP 223 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,799,405 Number of Sequences: 219361 Number of extensions: 730907 Number of successful extensions: 3600 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 3401 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3575 length of database: 80,573,946 effective HSP length: 93 effective length of database: 60,173,373 effective search space used: 1444160952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
