Clone Name | bastl47d01 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 349 bits (176), Expect = 4e-93 Identities = 233/252 (92%) Strand = Plus / Plus Query: 104 cgccgccgcgatgtacatggcgtacgggtggccgcagtcgatcccgctggacccgggcga 163 |||||||| ||||||||||||||| || |||||||||||||||||||| |||||||| || Sbjct: 33391011 cgccgccgagatgtacatggcgtatggctggccgcagtcgatcccgctcgacccggggga 33391070 Query: 164 gtccgacggcgcggtcctcctccgcgtcctcggccgcctcctcctcgccgtctgccccgc 223 |||||| ||| ||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 33391071 ctccgaccgcgtggtcctcctccgcgtcctcggccgctacctcctcgccgtctgcccggc 33391130 Query: 224 ctcgctccacctctggtccgcctcccaccacaaggtccgcctcgcccgcctcgaccgctc 283 ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 33391131 ctccctccacctctggtccgccgcccaccacaaggtccgcctcgcccgcctcgaccgctc 33391190 Query: 284 cccggactccctcgccgcgcacggccccaacgccgacgccgtctggagccccgacgccaa 343 |||||| ||||||||||| |||||| ||||||| || |||||||||||||||||||||| Sbjct: 33391191 cccggaatccctcgccgcccacggcgacaacgcccactccgtctggagccccgacgccaa 33391250 Query: 344 gaccgtcgccgt 355 |||||||||||| Sbjct: 33391251 gaccgtcgccgt 33391262 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 gtcctcctccgcgtcctcgg 196 |||||||||||||||||||| Sbjct: 27142344 gtcctcctccgcgtcctcgg 27142325 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 ctcggccgcctcctcctcgccgtc 215 |||||||||||||||| ||||||| Sbjct: 4829136 ctcggccgcctcctccgcgccgtc 4829159
>dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1715_H01 Length = 138733 Score = 349 bits (176), Expect = 4e-93 Identities = 233/252 (92%) Strand = Plus / Plus Query: 104 cgccgccgcgatgtacatggcgtacgggtggccgcagtcgatcccgctggacccgggcga 163 |||||||| ||||||||||||||| || |||||||||||||||||||| |||||||| || Sbjct: 131761 cgccgccgagatgtacatggcgtatggctggccgcagtcgatcccgctcgacccggggga 131820 Query: 164 gtccgacggcgcggtcctcctccgcgtcctcggccgcctcctcctcgccgtctgccccgc 223 |||||| ||| ||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 131821 ctccgaccgcgtggtcctcctccgcgtcctcggccgctacctcctcgccgtctgcccggc 131880 Query: 224 ctcgctccacctctggtccgcctcccaccacaaggtccgcctcgcccgcctcgaccgctc 283 ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 131881 ctccctccacctctggtccgccgcccaccacaaggtccgcctcgcccgcctcgaccgctc 131940 Query: 284 cccggactccctcgccgcgcacggccccaacgccgacgccgtctggagccccgacgccaa 343 |||||| ||||||||||| |||||| ||||||| || |||||||||||||||||||||| Sbjct: 131941 cccggaatccctcgccgcccacggcgacaacgcccactccgtctggagccccgacgccaa 132000 Query: 344 gaccgtcgccgt 355 |||||||||||| Sbjct: 132001 gaccgtcgccgt 132012
>dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1316_E06 Length = 110197 Score = 349 bits (176), Expect = 4e-93 Identities = 233/252 (92%) Strand = Plus / Plus Query: 104 cgccgccgcgatgtacatggcgtacgggtggccgcagtcgatcccgctggacccgggcga 163 |||||||| ||||||||||||||| || |||||||||||||||||||| |||||||| || Sbjct: 21630 cgccgccgagatgtacatggcgtatggctggccgcagtcgatcccgctcgacccggggga 21689 Query: 164 gtccgacggcgcggtcctcctccgcgtcctcggccgcctcctcctcgccgtctgccccgc 223 |||||| ||| ||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 21690 ctccgaccgcgtggtcctcctccgcgtcctcggccgctacctcctcgccgtctgcccggc 21749 Query: 224 ctcgctccacctctggtccgcctcccaccacaaggtccgcctcgcccgcctcgaccgctc 283 ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 21750 ctccctccacctctggtccgccgcccaccacaaggtccgcctcgcccgcctcgaccgctc 21809 Query: 284 cccggactccctcgccgcgcacggccccaacgccgacgccgtctggagccccgacgccaa 343 |||||| ||||||||||| |||||| ||||||| || |||||||||||||||||||||| Sbjct: 21810 cccggaatccctcgccgcccacggcgacaacgcccactccgtctggagccccgacgccaa 21869 Query: 344 gaccgtcgccgt 355 |||||||||||| Sbjct: 21870 gaccgtcgccgt 21881
>ref|XM_468161.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2697 Score = 337 bits (170), Expect = 1e-89 Identities = 224/242 (92%) Strand = Plus / Plus Query: 114 atgtacatggcgtacgggtggccgcagtcgatcccgctggacccgggcgagtccgacggc 173 |||||||||||||| || |||||||||||||||||||| |||||||| || |||||| || Sbjct: 1 atgtacatggcgtatggctggccgcagtcgatcccgctcgacccgggggactccgaccgc 60 Query: 174 gcggtcctcctccgcgtcctcggccgcctcctcctcgccgtctgccccgcctcgctccac 233 | ||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 61 gtggtcctcctccgcgtcctcggccgctacctcctcgccgtctgcccggcctccctccac 120 Query: 234 ctctggtccgcctcccaccacaaggtccgcctcgcccgcctcgaccgctccccggactcc 293 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 121 ctctggtccgccgcccaccacaaggtccgcctcgcccgcctcgaccgctccccggaatcc 180 Query: 294 ctcgccgcgcacggccccaacgccgacgccgtctggagccccgacgccaagaccgtcgcc 353 |||||||| |||||| ||||||| || |||||||||||||||||||||||||||||||| Sbjct: 181 ctcgccgcccacggcgacaacgcccactccgtctggagccccgacgccaagaccgtcgcc 240 Query: 354 gt 355 || Sbjct: 241 gt 242
>gb|AY022885.1| Oryza sativa microsatellite MRG5210 containing (CGG)X8, closest to marker C253, genomic sequence Length = 224 Score = 135 bits (68), Expect = 1e-28 Identities = 98/108 (90%) Strand = Plus / Minus Query: 104 cgccgccgcgatgtacatggcgtacgggtggccgcagtcgatcccgctggacccgggcga 163 |||||||| ||||||||||||||| || |||||||||||||||||||| |||||||| || Sbjct: 108 cgccgccgagatgtacatggcgtatggctggccgcagtcgatcccgctcgacccggggga 49 Query: 164 gtccgacggcgcggtcctcctccgcgtcctcggccgcctcctcctcgc 211 |||||| ||| ||||||||||||||||||||||||| ||||||||| Sbjct: 48 ctccgaccgcgtggtcctcctccgcgtcctcggccgctacctcctcgc 1
>gb|AY493693.1| Gallus gallus SRY-related protein 4 (Sox4) mRNA, complete cds Length = 1489 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 169 acggcgcggtcctcctccgcgtcctc 194 |||||||||||||||||||||||||| Sbjct: 1005 acggcgcggtcctcctccgcgtcctc 1030
>gb|AY249864.1| Gallus gallus SRY-box containing protein 4 mRNA, complete cds Length = 1794 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 169 acggcgcggtcctcctccgcgtcctc 194 |||||||||||||||||||||||||| Sbjct: 1032 acggcgcggtcctcctccgcgtcctc 1057
>ref|NM_204484.1| Gallus gallus SRY (sex determining region Y)-box 4 (SOX4), mRNA Length = 1794 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 169 acggcgcggtcctcctccgcgtcctc 194 |||||||||||||||||||||||||| Sbjct: 1032 acggcgcggtcctcctccgcgtcctc 1057
>emb|CR405770.1| Gallus gallus finished cDNA, clone ChEST880g17 Length = 833 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Minus Query: 179 cctcctccgcgtcctcggccgcctcctcctcg 210 |||||||| ||||||||||| ||||||||||| Sbjct: 356 cctcctcctcgtcctcggccccctcctcctcg 325
>emb|BX932463.2| Gallus gallus finished cDNA, clone ChEST628f4 Length = 1487 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Minus Query: 179 cctcctccgcgtcctcggccgcctcctcctcg 210 |||||||| ||||||||||| ||||||||||| Sbjct: 436 cctcctcctcgtcctcggccccctcctcctcg 405
>emb|BX929632.1| Gallus gallus finished cDNA, clone ChEST745p5 Length = 1425 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Minus Query: 179 cctcctccgcgtcctcggccgcctcctcctcg 210 |||||||| ||||||||||| ||||||||||| Sbjct: 356 cctcctcctcgtcctcggccccctcctcctcg 325
>ref|NM_203117.1| Arabidopsis thaliana unknown protein AT5G28350 transcript variant AT5G28350.2 mRNA, complete cds Length = 3470 Score = 46.1 bits (23), Expect = 0.076 Identities = 35/39 (89%) Strand = Plus / Plus Query: 113 gatgtacatggcgtacgggtggccgcagtcgatcccgct 151 |||||| ||||| ||||||||||||||| ||||||||| Sbjct: 96 gatgtatatggcttacgggtggccgcaggtgatcccgct 134
>ref|NM_122718.3| Arabidopsis thaliana unknown protein AT5G28350 transcript variant AT5G28350.1 mRNA, complete cds Length = 3710 Score = 46.1 bits (23), Expect = 0.076 Identities = 35/39 (89%) Strand = Plus / Plus Query: 113 gatgtacatggcgtacgggtggccgcagtcgatcccgct 151 |||||| ||||| ||||||||||||||| ||||||||| Sbjct: 162 gatgtatatggcttacgggtggccgcaggtgatcccgct 200
>ref|NM_188009.1| Oryza sativa (japonica cultivar-group), Ozsa8429 predicted mRNA Length = 615 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cgcctcctcctcgccgtctgccccgcc 224 |||||||||||||||||| |||||||| Sbjct: 231 cgcctcctcctcgccgtccgccccgcc 205
>gb|BT018589.1| Zea mays clone EL01N0447A12.d mRNA sequence Length = 1744 Score = 46.1 bits (23), Expect = 0.076 Identities = 29/31 (93%) Strand = Plus / Plus Query: 179 cctcctccgcgtcctcggccgcctcctcctc 209 |||||||| |||||||||| ||||||||||| Sbjct: 467 cctcctcctcgtcctcggcggcctcctcctc 497
>gb|AC117657.11| Mus musculus chromosome 15, clone RP23-299O23, complete sequence Length = 198005 Score = 46.1 bits (23), Expect = 0.076 Identities = 29/31 (93%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcctcctcct 208 |||| |||||||||||||||| ||||||||| Sbjct: 128515 tccttctccgcgtcctcggcctcctcctcct 128545
>ref|NM_174991.3| Mus musculus brain-specific angiogenesis inhibitor 1 (Bai1), mRNA Length = 6227 Score = 46.1 bits (23), Expect = 0.076 Identities = 29/31 (93%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcctcctcct 208 |||| |||||||||||||||| ||||||||| Sbjct: 109 tccttctccgcgtcctcggcctcctcctcct 139
>gb|AY039952.1| Arabidopsis thaliana At5g28350 mRNA sequence Length = 3609 Score = 46.1 bits (23), Expect = 0.076 Identities = 35/39 (89%) Strand = Plus / Plus Query: 113 gatgtacatggcgtacgggtggccgcagtcgatcccgct 151 |||||| ||||| ||||||||||||||| ||||||||| Sbjct: 96 gatgtatatggcttacgggtggccgcaggtgatcccgct 134
>emb|AL132962.1|ATF2A19 Arabidopsis thaliana DNA chromosome 3, BAC clone F2A19 Length = 95993 Score = 46.1 bits (23), Expect = 0.076 Identities = 35/39 (89%) Strand = Plus / Plus Query: 113 gatgtacatggcgtacgggtggccgcagtcgatcccgct 151 |||||| ||||| ||||||||||||||| ||||||||| Sbjct: 44118 gatgtatatggcttacgggtggccgcaggtgatcccgct 44156
>gb|BT008665.1| Arabidopsis thaliana clone RAFL17-08-D22 (R50323) unknown protein (At5g28440) mRNA, complete cds Length = 694 Score = 46.1 bits (23), Expect = 0.076 Identities = 35/39 (89%) Strand = Plus / Plus Query: 113 gatgtacatggcgtacgggtggccgcagtcgatcccgct 151 |||||| ||||| ||||||||||||||| ||||||||| Sbjct: 125 gatgtatatggcttacgggtggccgcaggtgatcccgct 163
>dbj|AK147459.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1046G04 product:brain-specific angiogenesis inhibitor 1, full insert sequence Length = 6180 Score = 46.1 bits (23), Expect = 0.076 Identities = 29/31 (93%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcctcctcct 208 |||| |||||||||||||||| ||||||||| Sbjct: 62 tccttctccgcgtcctcggcctcctcctcct 92
>dbj|AK147456.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1045K01 product:brain-specific angiogenesis inhibitor 1, full insert sequence Length = 6212 Score = 46.1 bits (23), Expect = 0.076 Identities = 29/31 (93%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcctcctcct 208 |||| |||||||||||||||| ||||||||| Sbjct: 94 tccttctccgcgtcctcggcctcctcctcct 124
>dbj|AK147607.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1087M14 product:brain-specific angiogenesis inhibitor 1, full insert sequence Length = 6232 Score = 46.1 bits (23), Expect = 0.076 Identities = 29/31 (93%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcctcctcct 208 |||| |||||||||||||||| ||||||||| Sbjct: 113 tccttctccgcgtcctcggcctcctcctcct 143
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cgcctcctcctcgccgtctgccccgcc 224 |||||||||||||||||| |||||||| Sbjct: 9087384 cgcctcctcctcgccgtccgccccgcc 9087358
>emb|BX832649.1|CNS0A1N8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH86ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 3619 Score = 46.1 bits (23), Expect = 0.076 Identities = 36/39 (92%), Gaps = 1/39 (2%) Strand = Plus / Plus Query: 113 gatgtacatggcgtacgggtggccgcagtcgatcccgct 151 |||||| ||||| |||||||||||||||| ||||||||| Sbjct: 162 gatgtatatggcttacgggtggccgcagt-gatcccgct 199
>emb|BX832869.1|CNS09YYE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL18ZF12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 680 Score = 46.1 bits (23), Expect = 0.076 Identities = 35/39 (89%) Strand = Plus / Plus Query: 113 gatgtacatggcgtacgggtggccgcagtcgatcccgct 151 |||||| ||||| ||||||||||||||| ||||||||| Sbjct: 166 gatgtatatggcttacgggtggccgcaggtgatcccgct 204
>gb|AF262038.1|F21B23 Arabidopsis thaliana BAC F21B23 Length = 71284 Score = 46.1 bits (23), Expect = 0.076 Identities = 35/39 (89%) Strand = Plus / Minus Query: 113 gatgtacatggcgtacgggtggccgcagtcgatcccgct 151 |||||| ||||| ||||||||||||||| ||||||||| Sbjct: 51149 gatgtatatggcttacgggtggccgcaggtgatcccgct 51111 Score = 46.1 bits (23), Expect = 0.076 Identities = 35/39 (89%) Strand = Plus / Plus Query: 113 gatgtacatggcgtacgggtggccgcagtcgatcccgct 151 |||||| ||||| ||||||||||||||| ||||||||| Sbjct: 2428 gatgtatatggcttacgggtggccgcaggtgatcccgct 2466
>dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0499C11 Length = 151369 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cgcctcctcctcgccgtctgccccgcc 224 |||||||||||||||||| |||||||| Sbjct: 116391 cgcctcctcctcgccgtccgccccgcc 116365
>dbj|AK063246.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-G10, full insert sequence Length = 928 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cgcctcctcctcgccgtctgccccgcc 224 |||||||||||||||||| |||||||| Sbjct: 299 cgcctcctcctcgccgtccgccccgcc 273
>gb|BC052736.1| Mus musculus SRY-box containing gene 4, mRNA (cDNA clone MGC:64652 IMAGE:6822618), complete cds Length = 2969 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 194 cggccgcctcctcctcgccgtc 215 |||||||||||||||||||||| Sbjct: 1377 cggccgcctcctcctcgccgtc 1398
>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC nbxb0045B21, complete sequence Length = 152397 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cgcctcgccccaccagcctcctcccc 28 ||||||||||| |||||||||||||| Sbjct: 47766 cgcctcgccccgccagcctcctcccc 47791
>ref|XM_413743.1| PREDICTED: Gallus gallus similar to RIKEN cDNA C630028N24 gene (LOC415358), mRNA Length = 1206 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 192 ctcggccgcctcctcctcgccg 213 |||||||||||||||||||||| Sbjct: 112 ctcggccgcctcctcctcgccg 91
>gb|AC024914.48| Mus musculus BAC Clone 262c6 RPCI-23, complete sequence Length = 205922 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 194 cggccgcctcctcctcgccgtc 215 |||||||||||||||||||||| Sbjct: 148949 cggccgcctcctcctcgccgtc 148970
>ref|XR_003788.1| PREDICTED: Mus musculus similar to Transcription factor SOX-4 (LOC672274), mRNA Length = 5815 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 194 cggccgcctcctcctcgccgtc 215 |||||||||||||||||||||| Sbjct: 2429 cggccgcctcctcctcgccgtc 2450
>gb|BC060669.1| Mus musculus SRY-box containing gene 4, mRNA (cDNA clone IMAGE:5708894), partial cds Length = 3090 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 194 cggccgcctcctcctcgccgtc 215 |||||||||||||||||||||| Sbjct: 1368 cggccgcctcctcctcgccgtc 1389
>gb|AC122537.4| Mus musculus BAC clone RP24-548A15 from chromosome 7, complete sequence Length = 195987 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcctcctcctcgc 211 ||||||||| |||||||| || |||||||||||| Sbjct: 179497 tcctcctcctcgtcctcgtcctcctcctcctcgc 179530
>emb|X70298.1|MMSOX4A M.musculus sox-4 mRNA Length = 2069 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 194 cggccgcctcctcctcgccgtc 215 |||||||||||||||||||||| Sbjct: 1372 cggccgcctcctcctcgccgtc 1393
>emb|AL606511.8| Mouse DNA sequence from clone RP23-262C6 on chromosome 13 Contains the Sox4 gene for SRY-box containing protein 4, a novel gene and two CpG islands, complete sequence Length = 154685 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 194 cggccgcctcctcctcgccgtc 215 |||||||||||||||||||||| Sbjct: 5611 cggccgcctcctcctcgccgtc 5590
>ref|NM_009238.2| Mus musculus SRY-box containing gene 4 (Sox4), mRNA Length = 2969 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 194 cggccgcctcctcctcgccgtc 215 |||||||||||||||||||||| Sbjct: 1377 cggccgcctcctcctcgccgtc 1398
>dbj|AK028989.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732479B04 product:SRY-box containing gene 4, full insert sequence Length = 4657 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 194 cggccgcctcctcctcgccgtc 215 |||||||||||||||||||||| Sbjct: 1395 cggccgcctcctcctcgccgtc 1416
>dbj|AK012269.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700022F13 product:hypothetical B-box zinc finger domain/RING finger containing protein, full insert sequence Length = 798 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 ccgcctcgcccgcctcgaccgc 281 |||||||||||||||||||||| Sbjct: 104 ccgcctcgcccgcctcgaccgc 125
>dbj|AK053840.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130314H04 product:SRY-box containing gene 4, full insert sequence Length = 2078 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 194 cggccgcctcctcctcgccgtc 215 |||||||||||||||||||||| Sbjct: 1393 cggccgcctcctcctcgccgtc 1414
>emb|BX933588.2| Gallus gallus finished cDNA, clone ChEST47l11 Length = 1206 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 192 ctcggccgcctcctcctcgccg 213 |||||||||||||||||||||| Sbjct: 112 ctcggccgcctcctcctcgccg 91
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cgcctcgccccaccagcctcctcccc 28 ||||||||||| |||||||||||||| Sbjct: 13879140 cgcctcgccccgccagcctcctcccc 13879165
>emb|BX935072.1| Gallus gallus finished cDNA, clone ChEST73o6 Length = 1300 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 192 ctcggccgcctcctcctcgccg 213 |||||||||||||||||||||| Sbjct: 205 ctcggccgcctcctcctcgccg 184
>ref|XM_344594.2| PREDICTED: Rattus norvegicus SRY-box containing gene 4 (predicted) (Sox4_predicted), mRNA Length = 2903 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 194 cggccgcctcctcctcgccgtc 215 |||||||||||||||||||||| Sbjct: 1369 cggccgcctcctcctcgccgtc 1390
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Minus Query: 248 ccaccacaaggtccgcctcgcccgcctcgaccgc 281 ||||| |||| ||||||||||||||||| ||||| Sbjct: 1051354 ccaccccaagctccgcctcgcccgcctccaccgc 1051321
>gb|AC006449.19|AC006449 Homo sapiens chromosome 17, clone hCIT.58_E_17, complete sequence Length = 286758 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Minus Query: 178 tcctcctccgcgtcctcggccgcctcctcctcgc 211 ||||||||||||||||| || |||||||||||| Sbjct: 150482 tcctcctccgcgtcctcctcctcctcctcctcgc 150449
>gb|AY108903.1| Zea mays PCO092726 mRNA sequence Length = 533 Score = 44.1 bits (22), Expect = 0.30 Identities = 28/30 (93%) Strand = Plus / Plus Query: 177 gtcctcctccgcgtcctcggccgcctcctc 206 |||||||||||||||| ||||| ||||||| Sbjct: 117 gtcctcctccgcgtccgcggcctcctcctc 146
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cgcctcgccccaccagcctcctcccc 28 ||||||||||| |||||||||||||| Sbjct: 13886482 cgcctcgccccgccagcctcctcccc 13886507
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Minus Query: 248 ccaccacaaggtccgcctcgcccgcctcgaccgc 281 ||||| |||| ||||||||||||||||| ||||| Sbjct: 724332 ccaccccaagctccgcctcgcccgcctccaccgc 724299
>emb|AL663048.12| Mouse DNA sequence from clone RP23-166N12 on chromosome X, complete sequence Length = 234817 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Minus Query: 177 gtcctcctccgcgtcctcggccgcctcctcctcg 210 |||||||||| |||||||| || ||||||||||| Sbjct: 86045 gtcctcctcctcgtcctcgtccacctcctcctcg 86012
>ref|XM_523981.1| PREDICTED: Pan troglodytes similar to Potassium voltage-gated channel subfamily G member 2 (Voltage-gated potassium channel subunit Kv6.2) (Cardiac potassium channel subunit) (LOC468593), mRNA Length = 5613 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 cctcggccgcctcctcctcgc 211 ||||||||||||||||||||| Sbjct: 865 cctcggccgcctcctcctcgc 845
>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0025K21, complete sequence Length = 146539 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 194 cggccgcctcctcctcgccgtctgc 218 ||||||||||||||||| ||||||| Sbjct: 16473 cggccgcctcctcctcgtcgtctgc 16449
>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10, complete sequence Length = 157609 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 194 cggccgcctcctcctcgccgtctgc 218 ||||||||||||||||| ||||||| Sbjct: 42457 cggccgcctcctcctcgtcgtctgc 42433
>ref|XM_582754.2| PREDICTED: Bos taurus similar to Potassium voltage-gated channel subfamily G member 2 (Voltage-gated potassium channel subunit Kv6.2) (Cardiac potassium channel subunit) (LOC506324), mRNA Length = 3135 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 cctcggccgcctcctcctcgc 211 ||||||||||||||||||||| Sbjct: 1459 cctcggccgcctcctcctcgc 1439
>gb|AC131744.3| Mus musculus BAC clone RP23-50E10 from chromosome 3, complete sequence Length = 225416 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 178 tcctcctccgcgtcctcggccgcctcctcctcg 210 ||||||||| |||||||| || ||||||||||| Sbjct: 16625 tcctcctcctcgtcctcgtcctcctcctcctcg 16593
>gb|AC114341.9| Homo sapiens chromosome 18, clone RP11-248M19, complete sequence Length = 169813 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 cctcggccgcctcctcctcgc 211 ||||||||||||||||||||| Sbjct: 64972 cctcggccgcctcctcctcgc 64952
>emb|AJ011021.1|HSA011021 Homo sapiens mRNA for cardiac potassium channel subunit (Kv6.2) Length = 1401 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 cctcggccgcctcctcctcgc 211 ||||||||||||||||||||| Sbjct: 397 cctcggccgcctcctcctcgc 377
>gb|AC110603.7| Homo sapiens chromosome 18, clone CTD-2006O16, complete sequence Length = 149256 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 179 cctcctccgcgtcctcggccgcctcctcc 207 |||||||| | |||||||||||||||||| Sbjct: 120002 cctcctcctcctcctcggccgcctcctcc 119974
>gb|AC104422.4| Homo sapiens chromosome 18, clone RP11-260B14, complete sequence Length = 147210 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 179 cctcctccgcgtcctcggccgcctcctcc 207 |||||||| | |||||||||||||||||| Sbjct: 101690 cctcctcctcctcctcggccgcctcctcc 101718
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 cctccgcgtcctcggccgcct 202 ||||||||||||||||||||| Sbjct: 1883308 cctccgcgtcctcggccgcct 1883288
>ref|NM_012283.1| Homo sapiens potassium voltage-gated channel, subfamily G, member 2 (KCNG2), mRNA Length = 1401 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 cctcggccgcctcctcctcgc 211 ||||||||||||||||||||| Sbjct: 397 cctcggccgcctcctcctcgc 377
>emb|BX929725.2| Gallus gallus finished cDNA, clone ChEST550c23 Length = 723 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 ctcggccgcctcctcctcgcc 212 ||||||||||||||||||||| Sbjct: 126 ctcggccgcctcctcctcgcc 106
>emb|BX932114.2| Gallus gallus finished cDNA, clone ChEST1033i22 Length = 721 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 ctcggccgcctcctcctcgcc 212 ||||||||||||||||||||| Sbjct: 129 ctcggccgcctcctcctcgcc 109
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 194 cggccgcctcctcctcgccgtctgc 218 ||||||||||||||||| ||||||| Sbjct: 17287757 cggccgcctcctcctcgtcgtctgc 17287733 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ccccaccagcctcctccccc 29 |||||||||||||||||||| Sbjct: 14426728 ccccaccagcctcctccccc 14426747
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 ggagccccgacgccaagaccgtcgc 352 |||||| |||||||||||||||||| Sbjct: 1629062 ggagcctcgacgccaagaccgtcgc 1629086 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 186 cgcgtcctcggccgcctcctcctcgccg 213 |||||| |||||| |||||||||||||| Sbjct: 26789352 cgcgtcgtcggcctcctcctcctcgccg 26789379
>emb|BX929921.1| Gallus gallus finished cDNA, clone ChEST290f2 Length = 1114 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 ctcggccgcctcctcctcgcc 212 ||||||||||||||||||||| Sbjct: 517 ctcggccgcctcctcctcgcc 497
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 tcctccgcgtcctcggccgcctcct 205 ||||| ||||||||||||||||||| Sbjct: 1614382 tcctcggcgtcctcggccgcctcct 1614358
>gb|AE005079.1| Halobacterium sp. NRC-1 section 110 of 170 of the complete genome Length = 12797 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 260 ccgcctcgcccgcctcgaccgctccccgg 288 ||||||||||||| |||||||||||||| Sbjct: 4920 ccgcctcgcccgcaccgaccgctccccgg 4892
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 ggagccccgacgccaagaccgtcgc 352 |||||| |||||||||||||||||| Sbjct: 28562 ggagcctcgacgccaagaccgtcgc 28586
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 tcctcctccgcgtcctcggcc 198 ||||||||||||||||||||| Sbjct: 161124 tcctcctccgcgtcctcggcc 161104
>gb|AC102480.8| Mus musculus chromosome 3, clone RP24-423L4, complete sequence Length = 189940 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcctcctcctcg 210 ||||||||| |||||||| || ||||||||||| Sbjct: 20613 tcctcctcctcgtcctcgtcctcctcctcctcg 20645
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 194 cggccgcctcctcctcgccgtctgc 218 ||||||||||||||||| ||||||| Sbjct: 17381401 cggccgcctcctcctcgtcgtctgc 17381377 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ccccaccagcctcctccccc 29 |||||||||||||||||||| Sbjct: 14508729 ccccaccagcctcctccccc 14508748
>gb|U68142.1|HSU68142 Human RalGDS-like 2 (RGL2) mRNA, partial cds Length = 1959 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cctcgccccaccagcctcctcccc 28 |||| ||||||||||||||||||| Sbjct: 966 cctctccccaccagcctcctcccc 989
>ref|NM_122727.1| Arabidopsis thaliana unknown protein AT5G28440 mRNA, complete cds Length = 831 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 120 atggcgtacgggtggccgcagtcgatcccgct 151 ||||| ||||||||||||||| ||||||||| Sbjct: 1 atggcttacgggtggccgcaggtgatcccgct 32
>ref|NM_116013.2| Arabidopsis thaliana unknown protein AT3G61480 mRNA, complete cds Length = 3384 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 120 atggcgtacgggtggccgcagtcgatcccgct 151 ||||| ||||||||||||||| ||||||||| Sbjct: 1 atggcttacgggtggccgcaggtgatcccgct 32
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 ctccacctctggtccgcctc 247 |||||||||||||||||||| Sbjct: 307249 ctccacctctggtccgcctc 307268
>ref|XM_483536.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1892 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 186 cgcgtcctcggccgcctcctcctcgccg 213 |||||| |||||| |||||||||||||| Sbjct: 522 cgcgtcgtcggcctcctcctcctcgccg 495
>ref|XM_464380.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1572 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 ctcggccgcctcctcctcgccgtc 215 |||||||||||||||| ||||||| Sbjct: 469 ctcggccgcctcctccgcgccgtc 492
>ref|XM_527362.1| PREDICTED: Pan troglodytes similar to ral guanine nucleotide dissociation stimulator-like 2; GDS-related protein; RAB2, member RAS oncogene family-like (LOC471983), mRNA Length = 2412 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cctcgccccaccagcctcctcccc 28 |||| ||||||||||||||||||| Sbjct: 1893 cctctccccaccagcctcctcccc 1916
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 cccggactccctcgccgcgc 303 |||||||||||||||||||| Sbjct: 889978 cccggactccctcgccgcgc 889959
>ref|NM_170744.2| Homo sapiens unc-5 homolog B (C. elegans) (UNC5B), mRNA Length = 3935 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gccgcctcctcctcgccgtc 215 |||||||||||||||||||| Sbjct: 326 gccgcctcctcctcgccgtc 307
>gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0020H14, complete sequence Length = 185623 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cgcccgccggcgagggggga 98 |||||||||||||||||||| Sbjct: 124205 cgcccgccggcgagggggga 124224
>gb|AC147925.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032N11 map near 50283S, complete sequence Length = 139217 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ccccaccagcctcctccccc 29 |||||||||||||||||||| Sbjct: 41562 ccccaccagcctcctccccc 41581
>ref|XM_414479.1| PREDICTED: Gallus gallus similar to PGC-1-related estrogen receptor alpha coactivator; peroxisome proliferator-activated receptor gamma coactivator 1 beta (LOC416148), mRNA Length = 2514 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 gccccaccagcctcctcccc 28 |||||||||||||||||||| Sbjct: 1232 gccccaccagcctcctcccc 1213
>gb|BC000316.1| Homo sapiens ral guanine nucleotide dissociation stimulator-like 2, mRNA (cDNA clone IMAGE:2821308), partial cds Length = 2073 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cctcgccccaccagcctcctcccc 28 |||| ||||||||||||||||||| Sbjct: 1019 cctctccccaccagcctcctcccc 1042
>gb|BC005037.1| Homo sapiens ral guanine nucleotide dissociation stimulator-like 2, mRNA (cDNA clone IMAGE:3629760), partial cds Length = 2395 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cctcgccccaccagcctcctcccc 28 |||| ||||||||||||||||||| Sbjct: 1401 cctctccccaccagcctcctcccc 1424
>gb|DQ356948.1| Crocodilepox virus, complete genome Length = 190054 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gccgcctcctcctcgccgtc 215 |||||||||||||||||||| Sbjct: 188721 gccgcctcctcctcgccgtc 188740 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gccgcctcctcctcgccgtc 215 |||||||||||||||||||| Sbjct: 1334 gccgcctcctcctcgccgtc 1315
>ref|NM_004761.2| Homo sapiens ral guanine nucleotide dissociation stimulator-like 2 (RGL2), mRNA Length = 2918 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cctcgccccaccagcctcctcccc 28 |||| ||||||||||||||||||| Sbjct: 1933 cctctccccaccagcctcctcccc 1956
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 gtcctcctccgcgtcctcgg 196 |||||||||||||||||||| Sbjct: 5194461 gtcctcctccgcgtcctcgg 5194480 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 cggccgcctcctcctcgccg 213 |||||||||||||||||||| Sbjct: 2827544 cggccgcctcctcctcgccg 2827563
>gb|AC126025.4| Mus musculus BAC clone RP24-461L18 from chromosome 14, complete sequence Length = 164636 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||| | ||||| |||||||||||||| Sbjct: 142129 tcctcctcctcctcctccgccgcctcctcctc 142098
>emb|Z81053.1|CEE02A10 Caenorhabditis elegans Cosmid E02A10, complete sequence Length = 23889 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||||| ||||| ||| |||||||||| Sbjct: 11779 tcctcctccgcatcctccgccacctcctcctc 11810
>gb|AC127335.4| Mus musculus BAC clone RP23-150G24 from 8, complete sequence Length = 215910 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||| | ||||| |||||||||||||| Sbjct: 176692 tcctcctcctcctcctctgccgcctcctcctc 176661
>gb|AY124937.1| Infectious hypodermal and hematopoietic necrosis virus isolate East Africa non-structural protein 1 (NS1) and structural protein genes, complete cds Length = 2935 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 gtccgcctcccaccacaagg 258 |||||||||||||||||||| Sbjct: 2825 gtccgcctcccaccacaagg 2844
>gb|AY358351.1| Homo sapiens clone DNA91779 GARS1883 (UNQ1883) mRNA, complete cds Length = 3884 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gccgcctcctcctcgccgtc 215 |||||||||||||||||||| Sbjct: 317 gccgcctcctcctcgccgtc 298
>gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare strain chromosome 3 clone OSJNBa0021H20, complete sequence Length = 133079 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 gtcctcctccgcgtcctcgg 196 |||||||||||||||||||| Sbjct: 17863 gtcctcctccgcgtcctcgg 17882
>emb|CR388405.10| Zebrafish DNA sequence from clone DKEY-11O1 in linkage group 16, complete sequence Length = 151303 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ctgccccgcctcgctccacc 234 |||||||||||||||||||| Sbjct: 72831 ctgccccgcctcgctccacc 72850
>emb|Z97184.1|HSF0811 Human DNA sequence from clone ICRF6c-CF0811 on chromosome 6 Contains the 3' end of the DAXX gene for death-associated protein 6 (Fas-binding protein), the ZNF297 gene for zinc finger protein 297 (BING1), the TAPBP gene for TAP-binding protein (tapasin), the RAB2L gene for RAB2 protein (member of RAS oncogene family)-like protein, the HKE2 gene for HLA class II region protein KE2, the 5' end of the C6ORF11 gene for chromosome 6 open reading frame 11 (BING4) and four CpG islands, complete sequence Length = 40127 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cctcgccccaccagcctcctcccc 28 |||| ||||||||||||||||||| Sbjct: 27857 cctctccccaccagcctcctcccc 27880
>emb|BX000343.5| Human DNA sequence from clone DAQB-193B15 on chromosome 6 Contains the 5'end of the C6orf11 gene for chromosome 6 open reading frame 11, the HKE2 gene for HLA class II region expressed gene KE2, the RGL2 gene for ral guanine nucleotide dissociation stimulator-like 2, and 2 CpG islands, complete sequence Length = 20343 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 cctcgccccaccagcctcctcccc 28 |||| ||||||||||||||||||| Sbjct: 14174 cctctccccaccagcctcctcccc 14151
>emb|AL662820.6| Human DNA sequence from clone XXbac-185D15 on chromosome 6 contains the RPS18 gene for ribosomal protein S18, the B3GALT4 gene for UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4, the C6ORF11 gene for chromosome 6 open reading frame 11, the HKE2 gene for HLA class II region expressed gene 2, the RAB2L gene for RAB2, member RAS oncogene family-like, the TAPBP gene for TAP binding protein (tapasin), the ZNF297 gene for zinc finger protein 297, the DAXX gene for death-associated protein 6, a myosin, light polypeptide 8, pseudogene (MYL8P) and seven CpG islands, complete sequence Length = 78635 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 cctcgccccaccagcctcctcccc 28 |||| ||||||||||||||||||| Sbjct: 22227 cctctccccaccagcctcctcccc 22204
>emb|AL662827.3| Human DNA sequence from clone XXbac-165D10 on chromosome 6 contains the 3' end of the RPS18 gene for ribosomal protein S18, the gene for chromosome 6 open reading frame 11, the HKE2 gene for HLA class II region expressed gene 2, the RAB2L gene for RAB2, member RAS oncogene family-like, the TAPBP gene for TAP binding protein (tapasin), the DAXX gene for death-associated protein 6, a myosin, light polypeptide 8, pseudogene, a novel protein similar to lysophospholipase II (LYPLA2) and six CpG islands, complete sequence Length = 110794 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 cctcgccccaccagcctcctcccc 28 |||| ||||||||||||||||||| Sbjct: 20237 cctctccccaccagcctcctcccc 20214
>emb|AL359832.33| Human DNA sequence from clone RP11-790G19 on chromosome 10 Contains the 5' end of the gene for transmembrane receptor Unc5H2 (UNC5H2),the 3'end of a novel gene and two CpG islands, complete sequence Length = 195130 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gccgcctcctcctcgccgtc 215 |||||||||||||||||||| Sbjct: 189986 gccgcctcctcctcgccgtc 189967
>gb|BC040989.1| Homo sapiens ral guanine nucleotide dissociation stimulator-like 2, mRNA (cDNA clone IMAGE:4816423), complete cds Length = 3204 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cctcgccccaccagcctcctcccc 28 |||| ||||||||||||||||||| Sbjct: 2215 cctctccccaccagcctcctcccc 2238
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 cctcgcccgcctcgaccgct 282 |||||||||||||||||||| Sbjct: 241338 cctcgcccgcctcgaccgct 241319
>emb|AL161589.2|ATCHRIV85 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 85 Length = 198750 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||| | ||||| |||||||||||||| Sbjct: 27430 tcctcctcctcctcctccgccgcctcctcctc 27399
>emb|AL050259.1|HSM800260 Homo sapiens mRNA; cDNA DKFZp564D0782 (from clone DKFZp564D0782) Length = 2918 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cctcgccccaccagcctcctcccc 28 |||| ||||||||||||||||||| Sbjct: 1933 cctctccccaccagcctcctcccc 1956
>emb|AL022141.1|ATF23E13 Arabidopsis thaliana DNA chromosome 4, BAC clone F23E13 (ESSAII project) Length = 94695 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||| | ||||| |||||||||||||| Sbjct: 50709 tcctcctcctcctcctccgccgcctcctcctc 50678
>gb|AC103758.14| Homo sapiens chromosome 8, clone CTD-3135A9, complete sequence Length = 235357 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cagcctcctcccccgtccctcaga 39 ||||||||||||| |||||||||| Sbjct: 75553 cagcctcctccccagtccctcaga 75576
>emb|CR759786.5| Human DNA sequence from clone DAMC-227D19 on chromosome 6, complete sequence Length = 123399 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 cctcgccccaccagcctcctcccc 28 |||| ||||||||||||||||||| Sbjct: 91929 cctctccccaccagcctcctcccc 91906
>gb|BC032681.1| Homo sapiens ral guanine nucleotide dissociation stimulator-like 2, mRNA (cDNA clone MGC:45263 IMAGE:5585507), complete cds Length = 2955 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cctcgccccaccagcctcctcccc 28 |||| ||||||||||||||||||| Sbjct: 1915 cctctccccaccagcctcctcccc 1938
>gb|BC025430.1| Mus musculus tripartite motif-containing 59, mRNA (cDNA clone MGC:29290 IMAGE:4017983), complete cds Length = 2863 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 gtccgcctcgcccgcctcgaccgc 281 ||||||||||||||||||| |||| Sbjct: 7 gtccgcctcgcccgcctcgcccgc 30
>emb|CR759817.3| Human DNA sequence from clone DADB-159G18 on chromosome 6, complete sequence Length = 108902 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 cctcgccccaccagcctcctcccc 28 |||| ||||||||||||||||||| Sbjct: 40832 cctctccccaccagcctcctcccc 40809
>emb|X15117.1|BJI3AH Bradyrhizobium japonicum gene for indole-3-acetamide hydrolase Length = 2026 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 cgggcgagtccgacggcgcg 176 |||||||||||||||||||| Sbjct: 745 cgggcgagtccgacggcgcg 726
>dbj|AK128132.1| Homo sapiens cDNA FLJ46253 fis, clone TESTI4022158, highly similar to Rattus norvegicus transmembrane receptor Unc5H2 (Unc5h2) Length = 3933 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gccgcctcctcctcgccgtc 215 |||||||||||||||||||| Sbjct: 371 gccgcctcctcctcgccgtc 352
>dbj|AK095967.1| Homo sapiens cDNA FLJ38648 fis, clone HHDPC2007267, highly similar to RAL GUANINE NUCLEOTIDE DISSOCIATION STIMULATOR-LIKE 2 Length = 2309 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cctcgccccaccagcctcctcccc 28 |||| ||||||||||||||||||| Sbjct: 1334 cctctccccaccagcctcctcccc 1357
>dbj|AK027597.1| Homo sapiens cDNA FLJ14691 fis, clone NT2RP2005325, highly similar to Homo sapiens LIM-homeodomain protein HLHX2 (LHX2) mRNA Length = 2417 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||||| ||||| ||||||||||||| Sbjct: 106 tcctcctccgcctcctcctccgcctcctcctc 137
>gb|AE012482.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 390 of 460 of the complete genome Length = 10246 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 cccgcgccgcatctcgcccggccg 73 ||||||| |||||||||||||||| Sbjct: 3051 cccgcgcggcatctcgcccggccg 3028
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cgcgtcctcggccgcctcct 205 |||||||||||||||||||| Sbjct: 3121992 cgcgtcctcggccgcctcct 3122011
>ref|NM_142899.1| Drosophila melanogaster beat-IV CG10152-RA (beat-IV), mRNA Length = 2820 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 180 ctcctccgcgtcctcggccgcctcctcctcgc 211 ||||||| |||||||| || |||||||||||| Sbjct: 1429 ctcctcctcgtcctcgtcctcctcctcctcgc 1398
>dbj|AK139648.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020008A02 product:weakly similar to Membrane-associated nucleic acid binding protein (Fragment) [Homo sapiens], full insert sequence Length = 4055 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 tcctcctccgcgtcctcggccgcc 201 ||||||||||||||||| |||||| Sbjct: 38 tcctcctccgcgtcctccgccgcc 15
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0091J11, from chromosome 3, complete sequence Length = 181163 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 gtcctcctccgcgtcctcgg 196 |||||||||||||||||||| Sbjct: 62057 gtcctcctccgcgtcctcgg 62038
>gb|AY069104.1| Drosophila melanogaster GH12267 full length cDNA Length = 2816 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 180 ctcctccgcgtcctcggccgcctcctcctcgc 211 ||||||| |||||||| || |||||||||||| Sbjct: 1425 ctcctcctcgtcctcgtcctcctcctcctcgc 1394
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtggccgcagtcgatcccgc 150 |||||||||||||||||||| Sbjct: 3042043 gtggccgcagtcgatcccgc 3042024
>ref|NM_198773.1| Rattus norvegicus protein phosphatase 1E (PP2C domain containing) (Ppm1e), mRNA Length = 2743 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||| || ||||||||||| ||||||| Sbjct: 413 tcctcctcctcgccctcggccgccgcctcctc 382
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 cccgcgccgcatctcgcccggccg 73 ||||||| |||||||||||||||| Sbjct: 685324 cccgcgcggcatctcgcccggccg 685301
>ref|NM_073745.1| Caenorhabditis elegans GRound-Like (grd related) family member (grl-23) (grl-23) mRNA, complete cds Length = 1158 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||||| ||||| ||| |||||||||| Sbjct: 432 tcctcctccgcatcctccgccacctcctcctc 401
>ref|NM_001027854.1| Caenorhabditis elegans GRound-Like (grd related) family member (grl-25) (grl-25) mRNA, complete cds Length = 2394 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||||| ||||| ||| |||||||||| Sbjct: 498 tcctcctccgcatcctccgccacctcctcctc 467
>dbj|AK082351.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230040D14 product:unclassifiable, full insert sequence Length = 2712 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 183 ctccgcgtcctcggccgcctcctcctcg 210 |||||| ||| ||||||||||||||||| Sbjct: 1107 ctccgcctccgcggccgcctcctcctcg 1134
>gb|AC119204.7| Mus musculus chromosome 1, clone RP24-188H2, complete sequence Length = 178603 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcc 201 ||||||||||||||||| |||||| Sbjct: 87195 tcctcctccgcgtcctccgccgcc 87218
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 186 cgcgtcctcggccgcctcctcctc 209 ||||||||||||| |||||||||| Sbjct: 13539258 cgcgtcctcggcctcctcctcctc 13539235 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gccgcctcctcctcgccgtc 215 |||||||||||||||||||| Sbjct: 7725244 gccgcctcctcctcgccgtc 7725225
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gccgcctcctcctcgccgtc 215 |||||||||||||||||||| Sbjct: 12644411 gccgcctcctcctcgccgtc 12644430 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 tcgcctcgccccaccagcctcctc 25 ||||||||||||||| |||||||| Sbjct: 10591764 tcgcctcgccccaccggcctcctc 10591787
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cgcccgccggcgagggggga 98 |||||||||||||||||||| Sbjct: 21570349 cgcccgccggcgagggggga 21570368
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 gtcctcctccgcgtcctcgg 196 |||||||||||||||||||| Sbjct: 5193676 gtcctcctccgcgtcctcgg 5193695 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 cggccgcctcctcctcgccg 213 |||||||||||||||||||| Sbjct: 2827655 cggccgcctcctcctcgccg 2827674
>gb|AC007603.5| Homo sapiens chromosome 16 clone RP11-305A4, complete sequence Length = 196927 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 182 cctccgcgtcctcggccgcctcctcctc 209 ||||||| ||||| |||||||||||||| Sbjct: 163421 cctccgcctcctctgccgcctcctcctc 163394
>gb|AC008236.4|AC008236 Drosophila melanogaster, chromosome 3R, region 95A-95A, BAC clone BACR24C15, complete sequence Length = 162923 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 180 ctcctccgcgtcctcggccgcctcctcctcgc 211 ||||||| |||||||| || |||||||||||| Sbjct: 106082 ctcctcctcgtcctcgtcctcctcctcctcgc 106051
>gb|AC139676.3| Homo sapiens chromosome 8, clone RP13-648O9, complete sequence Length = 166153 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 |||| |||| ||||||||||| |||||||||| Sbjct: 3268 tccttctcctcgtcctcggcctcctcctcctc 3299
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 cggccgcctcctcctcgccg 213 |||||||||||||||||||| Sbjct: 99500 cggccgcctcctcctcgccg 99519
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gccgcctcctcctcgccgtc 215 |||||||||||||||||||| Sbjct: 61957 gccgcctcctcctcgccgtc 61938
>gb|AC011372.7| Homo sapiens chromosome 5 clone CTB-108B20, complete sequence Length = 183330 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 gccccaccagcctcctcccc 28 |||||||||||||||||||| Sbjct: 107136 gccccaccagcctcctcccc 107117
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 gtcctcctccgcgtcctcgg 196 |||||||||||||||||||| Sbjct: 38793 gtcctcctccgcgtcctcgg 38774
>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_B01 Length = 129329 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 ctcggccgcctcctcctcgccgtc 215 |||||||||||||||| ||||||| Sbjct: 109726 ctcggccgcctcctccgcgccgtc 109749
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 ctcggccgcctcctcctcgccgtc 215 |||||||||||||||| ||||||| Sbjct: 71295 ctcggccgcctcctccgcgccgtc 71318
>dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1066D09 Length = 183999 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 tcgcctcgccccaccagcctcctc 25 ||||||||||||||| |||||||| Sbjct: 128471 tcgcctcgccccaccggcctcctc 128494
>dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652D10 Length = 156744 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gccgcctcctcctcgccgtc 215 |||||||||||||||||||| Sbjct: 126724 gccgcctcctcctcgccgtc 126743
>dbj|AP005971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0079K11 Length = 130082 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gccgcctcctcctcgccgtc 215 |||||||||||||||||||| Sbjct: 92806 gccgcctcctcctcgccgtc 92787
>dbj|AP006562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1175F05 Length = 126842 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 186 cgcgtcctcggccgcctcctcctc 209 ||||||||||||| |||||||||| Sbjct: 114186 cgcgtcctcggcctcctcctcctc 114163
>dbj|BS000120.2| Pan troglodytes chromosome 22 clone:RP43-007D11, map 22, complete sequences Length = 219802 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctcctcccccgtccctcag 38 |||||||||||||||||||| Sbjct: 191971 cctcctcccccgtccctcag 191952
>dbj|BS000032.1| Pan troglodytes chromosome 22 clone:RP43-047I19, map 22, complete sequences Length = 166625 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||||| ||||| ||| |||||||||| Sbjct: 80891 tcctcctccgcctcctctgcctcctcctcctc 80860
>emb|BX648015.1|HSM808161 Homo sapiens mRNA; cDNA DKFZp686M2259 (from clone DKFZp686M2259) Length = 2723 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cctcgccccaccagcctcctcccc 28 |||| ||||||||||||||||||| Sbjct: 1705 cctctccccaccagcctcctcccc 1728
>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0033D24 Length = 186132 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 186 cgcgtcctcggccgcctcctcctcgccg 213 |||||| |||||| |||||||||||||| Sbjct: 132694 cgcgtcgtcggcctcctcctcctcgccg 132721
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 186 cgcgtcctcggccgcctcctcctcgccg 213 |||||| |||||| |||||||||||||| Sbjct: 52142 cgcgtcgtcggcctcctcctcctcgccg 52169
>dbj|AB081729.1| Rattus norvegicus mRNA for calmodulin-dependent protein kinase phosphatase N, complete cds Length = 2743 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||| || ||||||||||| ||||||| Sbjct: 413 tcctcctcctcgccctcggccgccgcctcctc 382
>dbj|AK111401.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-E03, full insert sequence Length = 1689 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 gtcctcctccgcgtcctcgg 196 |||||||||||||||||||| Sbjct: 612 gtcctcctccgcgtcctcgg 631
>dbj|AK099722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088K05, full insert sequence Length = 1892 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 186 cgcgtcctcggccgcctcctcctcgccg 213 |||||| |||||| |||||||||||||| Sbjct: 522 cgcgtcgtcggcctcctcctcctcgccg 495
>dbj|AK106165.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-B06, full insert sequence Length = 1155 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 gtcctcctccgcgtcctcgg 196 |||||||||||||||||||| Sbjct: 287 gtcctcctccgcgtcctcgg 306
>dbj|AK106590.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-111-G04, full insert sequence Length = 1953 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cgcccgccggcgagggggga 98 |||||||||||||||||||| Sbjct: 131 cgcccgccggcgagggggga 112
>dbj|AK105878.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C07, full insert sequence Length = 1638 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 gtcctcctccgcgtcctcgg 196 |||||||||||||||||||| Sbjct: 567 gtcctcctccgcgtcctcgg 586
>dbj|AK101270.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032N04, full insert sequence Length = 3109 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 cggccgcctcctcctcgccg 213 |||||||||||||||||||| Sbjct: 156 cggccgcctcctcctcgccg 175
>dbj|AK100459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091L04, full insert sequence Length = 1394 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 gtcctcctccgcgtcctcgg 196 |||||||||||||||||||| Sbjct: 589 gtcctcctccgcgtcctcgg 608
>dbj|AK071483.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023094P22, full insert sequence Length = 613 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gccgcctcctcctcgccgtc 215 |||||||||||||||||||| Sbjct: 177 gccgcctcctcctcgccgtc 196
>dbj|AK070112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041O17, full insert sequence Length = 2120 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gccccaacgccgacgccgtc 326 |||||||||||||||||||| Sbjct: 54 gccccaacgccgacgccgtc 73
>emb|AL512357.4|CNS07EF6 Human chromosome 14 DNA sequence BAC R-260M19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 174612 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gccccaccagcctcctcccc 28 |||||||||||||||||||| Sbjct: 25810 gccccaccagcctcctcccc 25829
>dbj|AK068142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134C08, full insert sequence Length = 1180 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gccgcctcctcctcgccgtc 215 |||||||||||||||||||| Sbjct: 183 gccgcctcctcctcgccgtc 202
>gb|AC124191.4| Mus musculus BAC clone RP23-275E4 from 18, complete sequence Length = 203003 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||||| ||||| ||||||||||||| Sbjct: 171919 tcctcctccgcctcctcctccgcctcctcctc 171950 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||||| ||||| ||||||||||||| Sbjct: 171892 tcctcctccgcctcctcctccgcctcctcctc 171923 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||||| ||||| ||||||||||||| Sbjct: 171880 tcctcctccgcctcctcctccgcctcctcctc 171911 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||||| ||||| ||||||||||||| Sbjct: 171868 tcctcctccgcctcctcctccgcctcctcctc 171899
>gb|AE003744.3| Drosophila melanogaster chromosome 3R, section 82 of 118 of the complete sequence Length = 244356 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 180 ctcctccgcgtcctcggccgcctcctcctcgc 211 ||||||| |||||||| || |||||||||||| Sbjct: 16639 ctcctcctcgtcctcgtcctcctcctcctcgc 16608
>dbj|AP001728.1| Homo sapiens genomic DNA, chromosome 21q, section 72/105 Length = 340000 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctcctcccccgtccctcag 38 |||||||||||||||||||| Sbjct: 88704 cctcctcccccgtccctcag 88685
>dbj|AB096256.1| Homo sapiens p53RDL1 mRNA for p53-regulated receptor for death and life, complete cds Length = 3935 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gccgcctcctcctcgccgtc 215 |||||||||||||||||||| Sbjct: 326 gccgcctcctcctcgccgtc 307
>dbj|AP001432.2| Homo sapiens genomic DNA, chromosome 21q, clone:CMP21-T1601, complete sequence Length = 102247 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctcctcccccgtccctcag 38 |||||||||||||||||||| Sbjct: 56099 cctcctcccccgtccctcag 56080
>emb|Z11126.1|CEZK643 Caenorhabditis elegans Cosmid ZK643, complete sequence Length = 39534 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||||| ||||| ||| |||||||||| Sbjct: 38184 tcctcctccgcatcctccgccacctcctcctc 38153
>gb|AC132121.3| Mus musculus BAC clone RP24-62L21 from 13, complete sequence Length = 204277 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 183 ctccgcgtcctcggccgcctcctcctcg 210 |||||| ||| ||||||||||||||||| Sbjct: 19160 ctccgcctccgcggccgcctcctcctcg 19187
>gb|AC126037.4| Mus musculus BAC clone RP24-223I19 from 14, complete sequence Length = 189127 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||| | ||||| |||||||||||||| Sbjct: 17425 tcctcctcctcctcctccgccgcctcctcctc 17394
>gb|AC147551.5| Mus musculus BAC clone RP23-77G5 from 18, complete sequence Length = 275269 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||||| ||||| ||||||||||||| Sbjct: 49985 tcctcctccgcctcctcctccgcctcctcctc 50016 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||||| ||||| ||||||||||||| Sbjct: 49958 tcctcctccgcctcctcctccgcctcctcctc 49989 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||||| ||||| ||||||||||||| Sbjct: 49946 tcctcctccgcctcctcctccgcctcctcctc 49977 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||||| ||||| ||||||||||||| Sbjct: 49934 tcctcctccgcctcctcctccgcctcctcctc 49965
>gb|AC134337.3| Mus musculus BAC clone RP23-252I24 from 8, complete sequence Length = 169201 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||| | ||||| |||||||||||||| Sbjct: 132624 tcctcctcctcctcctctgccgcctcctcctc 132655
>gb|AC140415.3| Mus musculus BAC clone RP23-127A20 from 13, complete sequence Length = 221245 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 183 ctccgcgtcctcggccgcctcctcctcg 210 |||||| ||| ||||||||||||||||| Sbjct: 216140 ctccgcctccgcggccgcctcctcctcg 216167
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 cgcggtcctcctccgcgtcc 192 |||||||||||||||||||| Sbjct: 206844 cgcggtcctcctccgcgtcc 206825
>emb|AL731838.19| Mouse DNA sequence from clone RP23-139O16 on chromosome X, complete sequence Length = 212472 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 tcctcctccgcgtcctcggccgcctcctcctc 209 ||||||||||| ||||| ||||||||||||| Sbjct: 115033 tcctcctccgcctcctcctccgcctcctcctc 115002
>gb|M24333.1|RHBI3AH B.japonicum indole-3-acetamide hydrolase gene, complete cds Length = 2026 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 cgggcgagtccgacggcgcg 176 |||||||||||||||||||| Sbjct: 745 cgggcgagtccgacggcgcg 726
>dbj|AP000151.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone D47-S479, segment 3/16, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctcctcccccgtccctcag 38 |||||||||||||||||||| Sbjct: 58121 cctcctcccccgtccctcag 58102
>dbj|AP000010.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 3/13 Length = 100000 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctcctcccccgtccctcag 38 |||||||||||||||||||| Sbjct: 5776 cctcctcccccgtccctcag 5757
>dbj|AB012295.1| Homo sapiens HKE1.5 mRNA for GDS-related protein, complete cds Length = 2771 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cctcgccccaccagcctcctcccc 28 |||| ||||||||||||||||||| Sbjct: 1791 cctctccccaccagcctcctcccc 1814 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,299,421 Number of Sequences: 3902068 Number of extensions: 2299421 Number of successful extensions: 65706 Number of sequences better than 10.0: 181 Number of HSP's better than 10.0 without gapping: 189 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62383 Number of HSP's gapped (non-prelim): 3323 length of query: 355 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 333 effective length of database: 17,147,199,772 effective search space: 5710017524076 effective search space used: 5710017524076 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)