Clone Name | bastl47c08 |
---|---|
Clone Library Name | barley_pub |
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 Score = 716 bits (361), Expect = 0.0 Identities = 372/376 (98%) Strand = Plus / Plus Query: 42 agtgaaaaacagtgtgctggtgccattggttggagcagtgaaagcgaggagaggaggcca 101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agtgaaaaacagtgtgctggtgccattggttggagcagtgaaagcgaggagaggaggcca 60 Query: 102 agaacaagatgctgctgggagggctgatcgacaccctcacgggggcgaacaagagcgccc 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agaacaagatgctgctgggagggctgatcgacaccctcacgggggcgaacaagagcgccc 120 Query: 162 ggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcg 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcg 180 Query: 222 ccaccatcatcgacggcatcggcgagttcctcggcaggggcgtcacctgccagcttatca 281 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 181 ccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatca 240 Query: 282 gttccaccgccgtcgaccaagacaacggcggtcgcggggaggtgggcgcggaggcggagc 341 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 241 gctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggagc 300 Query: 342 tggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtccaagttcggcctca 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtccaagttcggcctca 360 Query: 402 ccttcgactggnaggt 417 ||||||||||| |||| Sbjct: 361 ccttcgactgggaggt 376
>gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (Lox:Hv1) gene, promoter region and partial cds Length = 5236 Score = 575 bits (290), Expect = e-161 Identities = 299/302 (99%) Strand = Plus / Plus Query: 1 ctcacacacactcacgcaacacacatccatcttcactgaaaagtgaaaaacagtgtgctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3403 ctcacacacactcacgcaacacacatccatcttcactgaaaagtgaaaaacagtgtgctg 3462 Query: 61 gtgccattggttggagcagtgaaagcgaggagaggaggccaagaacaagatgctgctggg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3463 gtgccattggttggagcagtgaaagcgaggagaggaggccaagaacaagatgctgctggg 3522 Query: 121 agggctgatcgacaccctcacgggggcgaacaagagcgcccggctcaagggcacggtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3523 agggctgatcgacaccctcacgggggcgaacaagagcgcccggctcaagggcacggtggt 3582 Query: 181 gctcatgcgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggcat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3583 gctcatgcgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggcat 3642 Query: 241 cggcgagttcctcggcaggggcgtcacctgccagcttatcagttccaccgccgtcgacca 300 ||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 3643 cggcgagttcctcggcaagggcgtcacctgccagcttatcagctccaccgccatcgacca 3702 Query: 301 ag 302 || Sbjct: 3703 ag 3704 Score = 218 bits (110), Expect = 1e-53 Identities = 115/117 (98%) Strand = Plus / Plus Query: 301 agacaacggcggtcgcggggaggtgggcgcggaggcggagctggagcagtgggtgacgag 360 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 4253 agacaacggcggtcgcgggaaggtgggcgcggaggcggagctggagcagtgggtgacgag 4312 Query: 361 cctgccgtcgctgacgacgggggagtccaagttcggcctcaccttcgactggnaggt 417 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4313 cctgccgtcgctgacgacgggggagtccaagttcggcctcaccttcgactgggaggt 4369
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 283 bits (143), Expect = 2e-73 Identities = 244/278 (87%) Strand = Plus / Plus Query: 140 acgggggcgaacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtg 199 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 28 acgggggcgaacaagcatgcgcggctcaagggcacggtggtgctcatgcgcaagaacgtg 87 Query: 200 ctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcagg 259 ||||||||||||||||||||||||||| || | ||| ||||| ||||||||||||||| | Sbjct: 88 ctggacctcaacgacttcggcgccaccgtcgttgacagcatcagcgagttcctcggcaag 147 Query: 260 ggcgtcacctgccagcttatcagttccaccgccgtcgaccaagacaacggcggtcgcggg 319 || |||||||||||||| ||||| |||||| ||||||| |||||||| |||||| Sbjct: 148 ggggtcacctgccagctcatcagctccaccctcgtcgacgccaacaacggcaaccgcggg 207 Query: 320 gaggtgggcgcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacg 379 ||| || ||||||||| | |||||||||||| ||||||||||||||||||||||||| Sbjct: 208 cgggtcggggcggaggcgaacctggagcagtggctgacgagcctgccgtcgctgacgacc 267 Query: 380 ggggagtccaagttcggcctcaccttcgactggnaggt 417 || ||||||||||||||| |||| ||||||||| |||| Sbjct: 268 ggcgagtccaagttcggcgtcacgttcgactgggaggt 305
>gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence Length = 515 Score = 283 bits (143), Expect = 2e-73 Identities = 244/278 (87%) Strand = Plus / Plus Query: 140 acgggggcgaacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtg 199 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 90 acgggggcgaacaagcatgcgcggctcaagggcacggtggtgctcatgcgcaagaacgtg 149 Query: 200 ctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcagg 259 ||||||||||||||||||||||||||| || | ||| ||||| ||||||||||||||| | Sbjct: 150 ctggacctcaacgacttcggcgccaccgtcgttgacagcatcagcgagttcctcggcaag 209 Query: 260 ggcgtcacctgccagcttatcagttccaccgccgtcgaccaagacaacggcggtcgcggg 319 || |||||||||||||| ||||| |||||| ||||||| |||||||| |||||| Sbjct: 210 ggggtcacctgccagctcatcagctccaccctcgtcgacgccaacaacggcaaccgcggg 269 Query: 320 gaggtgggcgcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacg 379 ||| || ||||||||| | |||||||||||| ||||||||||||||||||||||||| Sbjct: 270 cgggtcggggcggaggcgaacctggagcagtggctgacgagcctgccgtcgctgacgacc 329 Query: 380 ggggagtccaagttcggcctcaccttcgactggnaggt 417 || ||||||||||||||| |||| ||||||||| |||| Sbjct: 330 ggcgagtccaagttcggcgtcacgttcgactgggaggt 367
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2601 Score = 280 bits (141), Expect = 3e-72 Identities = 227/255 (89%), Gaps = 3/255 (1%) Strand = Plus / Plus Query: 161 cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 220 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 49 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 108 Query: 221 gccaccatcatcgacggcatcggcgagttcctcggcaggggcgtcacctgccagcttatc 280 |||||| ||||||||||| |||||||||||||||||| |||||||||||||||||| ||| Sbjct: 109 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 168 Query: 281 agttccaccgccgtcgaccaagacaacggcggtcgcggggaggtgggcgcggaggcggag 340 || |||||||||||||||| | |||||||| || ||| ||||||| ||||||||| Sbjct: 169 agctccaccgccgtcgacccaaacaacggcaaccgggggaaggtgggggcggaggcgagc 228 Query: 341 ctggagcagtgggtgacg---agcctgccgtcgctgacgacgggggagtccaagttcggc 397 |||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 229 ctggagcagtggctgacgagcagcctgccgtcgctgacgacgggggagtcgcggttcggc 288 Query: 398 ctcaccttcgactgg 412 | || ||||||||| Sbjct: 289 gtgacgttcgactgg 303
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 220 bits (111), Expect = 3e-54 Identities = 132/139 (94%) Strand = Plus / Plus Query: 161 cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 220 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 42884 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 42943 Query: 221 gccaccatcatcgacggcatcggcgagttcctcggcaggggcgtcacctgccagcttatc 280 |||||| ||||||||||| |||||||||||||||||| |||||||||||||||||| ||| Sbjct: 42944 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 43003 Query: 281 agttccaccgccgtcgacc 299 || |||||||||||||||| Sbjct: 43004 agctccaccgccgtcgacc 43022 Score = 73.8 bits (37), Expect = 4e-10 Identities = 81/95 (85%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 321 aggtgggcgcggaggcggagctggagcagtgggtgacgagc---ctgccgtcgctgacga 377 ||||||| ||||||||| |||||||||||| |||||||| |||||||||||||||| Sbjct: 43442 aggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctgacga 43501 Query: 378 cgggggagtccaagttcggcctcaccttcgactgg 412 |||||||||| ||||||| | || ||||||||| Sbjct: 43502 cgggggagtcgcggttcggcgtgacgttcgactgg 43536
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 220 bits (111), Expect = 3e-54 Identities = 132/139 (94%) Strand = Plus / Plus Query: 161 cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 220 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 27798754 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 27798813 Query: 221 gccaccatcatcgacggcatcggcgagttcctcggcaggggcgtcacctgccagcttatc 280 |||||| ||||||||||| |||||||||||||||||| |||||||||||||||||| ||| Sbjct: 27798814 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 27798873 Query: 281 agttccaccgccgtcgacc 299 || |||||||||||||||| Sbjct: 27798874 agctccaccgccgtcgacc 27798892 Score = 127 bits (64), Expect = 3e-26 Identities = 112/128 (87%) Strand = Plus / Plus Query: 149 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 208 ||||||| |||||| ||||||||| | | || |||||||||||||||| || ||| || Sbjct: 30023293 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 30023352 Query: 209 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaggggcgtcacc 268 |||||||||||||||||| |||||||||||||| ||||||||||||| | ||||||||| Sbjct: 30023353 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 30023412 Query: 269 tgccagct 276 |||||||| Sbjct: 30023413 tgccagct 30023420 Score = 95.6 bits (48), Expect = 1e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 341 ctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtccaagttcgg 396 |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 30023563 ctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtccaagttcgg 30023618 Score = 73.8 bits (37), Expect = 4e-10 Identities = 81/95 (85%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 321 aggtgggcgcggaggcggagctggagcagtgggtgacgagc---ctgccgtcgctgacga 377 ||||||| ||||||||| |||||||||||| |||||||| |||||||||||||||| Sbjct: 27799312 aggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctgacga 27799371 Query: 378 cgggggagtccaagttcggcctcaccttcgactgg 412 |||||||||| ||||||| | || ||||||||| Sbjct: 27799372 cgggggagtcgcggttcggcgtgacgttcgactgg 27799406 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 acacactcacgcaacacaca 25 |||||||||||||||||||| Sbjct: 22625516 acacactcacgcaacacaca 22625535 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 20262030 gagaggaggccaagaacaag 20262049
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 220 bits (111), Expect = 3e-54 Identities = 132/139 (94%) Strand = Plus / Plus Query: 161 cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 220 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 27890078 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 27890137 Query: 221 gccaccatcatcgacggcatcggcgagttcctcggcaggggcgtcacctgccagcttatc 280 |||||| ||||||||||| |||||||||||||||||| |||||||||||||||||| ||| Sbjct: 27890138 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 27890197 Query: 281 agttccaccgccgtcgacc 299 || |||||||||||||||| Sbjct: 27890198 agctccaccgccgtcgacc 27890216 Score = 127 bits (64), Expect = 3e-26 Identities = 112/128 (87%) Strand = Plus / Plus Query: 149 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 208 ||||||| |||||| ||||||||| | | || |||||||||||||||| || ||| || Sbjct: 30114715 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 30114774 Query: 209 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaggggcgtcacc 268 |||||||||||||||||| |||||||||||||| ||||||||||||| | ||||||||| Sbjct: 30114775 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 30114834 Query: 269 tgccagct 276 |||||||| Sbjct: 30114835 tgccagct 30114842 Score = 95.6 bits (48), Expect = 1e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 341 ctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtccaagttcgg 396 |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 30114985 ctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtccaagttcgg 30115040 Score = 73.8 bits (37), Expect = 4e-10 Identities = 81/95 (85%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 321 aggtgggcgcggaggcggagctggagcagtgggtgacgagc---ctgccgtcgctgacga 377 ||||||| ||||||||| |||||||||||| |||||||| |||||||||||||||| Sbjct: 27890636 aggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctgacga 27890695 Query: 378 cgggggagtccaagttcggcctcaccttcgactgg 412 |||||||||| ||||||| | || ||||||||| Sbjct: 27890696 cgggggagtcgcggttcggcgtgacgttcgactgg 27890730 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 acacactcacgcaacacaca 25 |||||||||||||||||||| Sbjct: 22618545 acacactcacgcaacacaca 22618564 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 20255059 gagaggaggccaagaacaag 20255078
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 220 bits (111), Expect = 3e-54 Identities = 132/139 (94%) Strand = Plus / Minus Query: 161 cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 220 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 15139 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 15080 Query: 221 gccaccatcatcgacggcatcggcgagttcctcggcaggggcgtcacctgccagcttatc 280 |||||| ||||||||||| |||||||||||||||||| |||||||||||||||||| ||| Sbjct: 15079 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 15020 Query: 281 agttccaccgccgtcgacc 299 || |||||||||||||||| Sbjct: 15019 agctccaccgccgtcgacc 15001 Score = 73.8 bits (37), Expect = 4e-10 Identities = 81/95 (85%), Gaps = 3/95 (3%) Strand = Plus / Minus Query: 321 aggtgggcgcggaggcggagctggagcagtgggtgacgagc---ctgccgtcgctgacga 377 ||||||| ||||||||| |||||||||||| |||||||| |||||||||||||||| Sbjct: 14581 aggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctgacga 14522 Query: 378 cgggggagtccaagttcggcctcaccttcgactgg 412 |||||||||| ||||||| | || ||||||||| Sbjct: 14521 cgggggagtcgcggttcggcgtgacgttcgactgg 14487
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 196 bits (99), Expect = 4e-47 Identities = 144/159 (90%) Strand = Plus / Plus Query: 140 acgggggcgaacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtg 199 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 176 acgggggcgaacaagcatgcgcggctcaagggcacggtggtgctcatgcgcaagaacgtg 235 Query: 200 ctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcagg 259 ||||||||||||||||||||||||||| || | ||| ||||| ||||||||||||||| | Sbjct: 236 ctggacctcaacgacttcggcgccaccgtcgttgacagcatcagcgagttcctcggcaag 295 Query: 260 ggcgtcacctgccagcttatcagttccaccgccgtcgac 298 || |||||||||||||| ||||| |||||| ||||||| Sbjct: 296 ggggtcacctgccagctcatcagctccaccctcgtcgac 334 Score = 115 bits (58), Expect = 1e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 329 gcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtcc 388 ||||||||| | |||||||||||| ||||||||||||||||||||||||| || |||||| Sbjct: 945 gcggaggcgaacctggagcagtggctgacgagcctgccgtcgctgacgaccggcgagtcc 1004 Query: 389 aagttcggcctcaccttcgactggnaggt 417 ||||||||| |||| ||||||||| |||| Sbjct: 1005 aagttcggcgtcacgttcgactgggaggt 1033
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 Score = 153 bits (77), Expect = 5e-34 Identities = 161/189 (85%) Strand = Plus / Plus Query: 164 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 223 ||||||||| | || || |||||||||||||||| ||| ||| ||||||||||||||||| Sbjct: 121 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 180 Query: 224 accatcatcgacggcatcggcgagttcctcggcaggggcgtcacctgccagcttatcagt 283 | |||| |||||| || |||| |||||||| | ||||||||||||||||| ||||| Sbjct: 181 cacgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 240 Query: 284 tccaccgccgtcgaccaagacaacggcggtcgcggggaggtgggcgcggaggcggagctg 343 |||||| ||||||||| ||||||| || |||||| ||||||||||||||||| | ||| Sbjct: 241 tccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacctg 300 Query: 344 gagcagtgg 352 ||||||||| Sbjct: 301 gagcagtgg 309
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2613 Score = 127 bits (64), Expect = 3e-26 Identities = 112/128 (87%) Strand = Plus / Plus Query: 149 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 208 ||||||| |||||| ||||||||| | | || |||||||||||||||| || ||| || Sbjct: 34 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 93 Query: 209 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaggggcgtcacc 268 |||||||||||||||||| |||||||||||||| ||||||||||||| | ||||||||| Sbjct: 94 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 153 Query: 269 tgccagct 276 |||||||| Sbjct: 154 tgccagct 161 Score = 95.6 bits (48), Expect = 1e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 341 ctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtccaagttcgg 396 |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 226 ctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtccaagttcgg 281
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 127 bits (64), Expect = 3e-26 Identities = 112/128 (87%) Strand = Plus / Minus Query: 149 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 208 ||||||| |||||| ||||||||| | | || |||||||||||||||| || ||| || Sbjct: 84458 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 84399 Query: 209 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaggggcgtcacc 268 |||||||||||||||||| |||||||||||||| ||||||||||||| | ||||||||| Sbjct: 84398 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 84339 Query: 269 tgccagct 276 |||||||| Sbjct: 84338 tgccagct 84331 Score = 95.6 bits (48), Expect = 1e-16 Identities = 54/56 (96%) Strand = Plus / Minus Query: 341 ctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtccaagttcgg 396 |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 84188 ctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtccaagttcgg 84133
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full insert sequence Length = 2928 Score = 127 bits (64), Expect = 3e-26 Identities = 112/128 (87%) Strand = Plus / Plus Query: 149 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 208 ||||||| |||||| ||||||||| | | || |||||||||||||||| || ||| || Sbjct: 149 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 208 Query: 209 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaggggcgtcacc 268 |||||||||||||||||| |||||||||||||| ||||||||||||| | ||||||||| Sbjct: 209 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 268 Query: 269 tgccagct 276 |||||||| Sbjct: 269 tgccagct 276 Score = 95.6 bits (48), Expect = 1e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 341 ctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtccaagttcgg 396 |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 341 ctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtccaagttcgg 396
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds Length = 2845 Score = 123 bits (62), Expect = 5e-25 Identities = 107/122 (87%) Strand = Plus / Plus Query: 231 tcgacggcatcggcgagttcctcggcaggggcgtcacctgccagcttatcagttccaccg 290 |||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||| Sbjct: 140 tcgacggcatcggcgagttcctcggccgcggcgtcacctgccagcttatcagctccaccg 199 Query: 291 ccgtcgaccaagacaacggcggtcgcggggaggtgggcgcggaggcggagctggagcagt 350 |||||||| |||||||| |||||| || |||||||||||||| |||||||||| Sbjct: 200 tcgtcgaccctaacaacggcaaccgcgggaagttgggcgcggaggcgagcctggagcagt 259 Query: 351 gg 352 || Sbjct: 260 gg 261
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 Length = 2830 Score = 111 bits (56), Expect = 2e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 149 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 208 ||||||| |||||| ||||||||| | | || |||||||||||||||| || ||| || Sbjct: 131 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 190 Query: 209 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaggggcgtcacc 268 |||||||||||||||||| ||||||| ||||| ||||||||||||| | ||||||||| Sbjct: 191 aacgacttcggcgccaccgtcatcgagcgcatctccgagttcctcggccgcggcgtcacc 250 Query: 269 tgccagct 276 |||||||| Sbjct: 251 tgccagct 258 Score = 95.6 bits (48), Expect = 1e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 341 ctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtccaagttcgg 396 |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 323 ctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtccaagttcgg 378
>gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene, promoter region and partial cds Length = 3196 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 228 tcatcgacggcatcggcgagttcctcggcaggggcgtcacctgccagcttatcagttcca 287 |||| |||||| ||||||||||||||||| | |||||||||||||| || |||| |||| Sbjct: 2387 tcatggacggcctcggcgagttcctcggccgcggcgtcacctgccaactcgtcagctcca 2446 Query: 288 ccgccgtcgacc 299 ||| |||||||| Sbjct: 2447 ccgtcgtcgacc 2458 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 164 ctcaagggcacggtggtgctcatgcgcaagaacgtgct 201 |||||||||| |||||||||||||||||| |||||| Sbjct: 2317 ctcaagggcaacctggtgctcatgcgcaagaccgtgct 2354
>gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene, partial cds Length = 1160 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 188 cgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgag 247 |||||||||| || ||| |||||||||||||||||||| || ||| || || |||| Sbjct: 1 cgcaagaacgccctcgacatcaacgacttcggcgccaccgtcctcgggcgcgtctccgag 60 Query: 248 ttcctcggcaggggcgtcacctgccagct 276 ||||||||| | ||||||||||||||||| Sbjct: 61 ttcctcggccgcggcgtcacctgccagct 89 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 360 gcctgccgtcgctgacgacgggggagtccaagttcgg 396 |||||||||||| ||||||||| |||||||||||||| Sbjct: 173 gcctgccgtcgcggacgacgggagagtccaagttcgg 209
>gb|AC161374.6| Mus musculus BAC clone RP23-266O23 from chromosome 14, complete sequence Length = 202929 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 315 gcggggaggtgggcgcggaggcggagctggag 346 |||||| ||||||||||||||||||||||||| Sbjct: 65378 gcggggcggtgggcgcggaggcggagctggag 65347
>ref|XM_974706.1| PREDICTED: Mus musculus hypothetical protein LOC665118 (LOC665118), mRNA Length = 444 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 315 gcggggaggtgggcgcggaggcggagctggag 346 |||||| ||||||||||||||||||||||||| Sbjct: 237 gcggggcggtgggcgcggaggcggagctggag 206
>ref|XM_977694.1| PREDICTED: Mus musculus discs, large homolog 5 (Drosophila), transcript variant 2 (Dlg5), mRNA Length = 7853 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 315 gcggggaggtgggcgcggaggcggagctggag 346 |||||| ||||||||||||||||||||||||| Sbjct: 110 gcggggcggtgggcgcggaggcggagctggag 141
>gb|AC163638.2| Mus musculus BAC clone RP23-188H10 from chromosome 14, complete sequence Length = 203950 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 315 gcggggaggtgggcgcggaggcggagctggag 346 |||||| ||||||||||||||||||||||||| Sbjct: 47097 gcggggcggtgggcgcggaggcggagctggag 47128
>dbj|AK147699.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1109K17 product:discs, large homolog 5 (Drosophila), full insert sequence Length = 7852 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 315 gcggggaggtgggcgcggaggcggagctggag 346 |||||| ||||||||||||||||||||||||| Sbjct: 111 gcggggcggtgggcgcggaggcggagctggag 142
>ref|NM_016967.2| Mus musculus oligodendrocyte transcription factor 2 (Olig2), mRNA Length = 2462 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 3 cacacacactcacgcaacacacat 26 |||||||||||||||||||||||| Sbjct: 1891 cacacacactcacgcaacacacat 1914
>gb|AC034116.10| Mus musculus chromosome 16, clone RP23-428P5, complete sequence Length = 210023 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 3 cacacacactcacgcaacacacat 26 |||||||||||||||||||||||| Sbjct: 161083 cacacacactcacgcaacacacat 161106
>gb|AC152503.5| Mus musculus BAC clone RP23-190G10 from chromosome 16, complete sequence Length = 204940 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 3 cacacacactcacgcaacacacat 26 |||||||||||||||||||||||| Sbjct: 4075 cacacacactcacgcaacacacat 4098
>dbj|AK080615.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830025B18 product:oligodendrocyte transcription factor 2, full insert sequence Length = 2362 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 3 cacacacactcacgcaacacacat 26 |||||||||||||||||||||||| Sbjct: 1869 cacacacactcacgcaacacacat 1892
>gb|BC051967.1| Mus musculus oligodendrocyte transcription factor 2, mRNA (cDNA clone MGC:62240 IMAGE:5695592), complete cds Length = 2462 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 3 cacacacactcacgcaacacacat 26 |||||||||||||||||||||||| Sbjct: 1891 cacacacactcacgcaacacacat 1914
>dbj|AB038697.1| Mus musculus mRNA for Olig2 bHLH protein, complete cds Length = 2433 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 3 cacacacactcacgcaacacacat 26 |||||||||||||||||||||||| Sbjct: 1870 cacacacactcacgcaacacacat 1893
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 324 tgggcgcggaggcggagctgga 345 |||||||||||||||||||||| Sbjct: 1904267 tgggcgcggaggcggagctgga 1904288
>gb|AC120057.9| Homo sapiens chromosome 17, clone CTD-2545G14, complete sequence Length = 198821 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 cacacacactcacgcaacacac 24 |||||||||||||||||||||| Sbjct: 67475 cacacacactcacgcaacacac 67496
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 388 caagttcggcctcaccttcgac 409 |||||||||||||||||||||| Sbjct: 4616430 caagttcggcctcaccttcgac 4616409
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 164 ctcaagggcacggtggtgctca 185 |||||||||||||||||||||| Sbjct: 1464951 ctcaagggcacggtggtgctca 1464930
>emb|AL355138.19| Human DNA sequence from clone RP11-203J14 on chromosome 10 Contains the gene for neuropeptide FF 1; RFamide-related peptide receptor (OT7T022), the 3' end of a novel gene (FLJ10751) and two CpG islands, complete sequence Length = 80236 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 gaggagaggaggccaagaaca 107 ||||||||||||||||||||| Sbjct: 46254 gaggagaggaggccaagaaca 46274
>ref|XM_965327.1| PREDICTED: Tribolium castaneum similar to CG7627-PA (LOC658981), mRNA Length = 4060 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 218 ggcgccaccatcatcgacggcatcg 242 ||||||| ||||||||||||||||| Sbjct: 3298 ggcgccatcatcatcgacggcatcg 3322
>emb|Z22956.1|NMHSP63A N.meningitidis of Hsp63 gene Length = 1632 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 222 ccaccatcatcgacggcatcggcga 246 ||||||||||||||||| ||||||| Sbjct: 989 ccaccatcatcgacggcttcggcga 1013
>emb|Z22955.1|NFHSP63A N.flavescens Hsp63 gene Length = 1632 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 222 ccaccatcatcgacggcatcggcga 246 ||||||||||||||||| ||||||| Sbjct: 989 ccaccatcatcgacggcttcggcga 1013
>emb|AL162753.2|NMA2Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 2/7 Length = 349061 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 222 ccaccatcatcgacggcatcggcga 246 ||||||||||||||||| ||||||| Sbjct: 112319 ccaccatcatcgacggcttcggcga 112343
>dbj|D28817.1|ACNGROESL Actinobacillus actinomycetemcomitans groES and groEL genes, complete cds Length = 2389 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 222 ccaccatcatcgacggcatcggcga 246 |||||||||||||||| |||||||| Sbjct: 1517 ccaccatcatcgacggtatcggcga 1541
>gb|AC009051.8| Homo sapiens chromosome 16 clone RP11-238M18, complete sequence Length = 157691 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 cacacactcacgcaacacaca 25 ||||||||||||||||||||| Sbjct: 40763 cacacactcacgcaacacaca 40743
>gb|AC136285.2| Homo sapiens chromosome 16 clone RP11-899L11, complete sequence Length = 235286 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 cacacactcacgcaacacaca 25 ||||||||||||||||||||| Sbjct: 137837 cacacactcacgcaacacaca 137817
>dbj|AK102985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116C01, full insert sequence Length = 2012 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 cgcggggaggtgggcgcggaggcgg 338 ||||| ||||||||||||||||||| Sbjct: 314 cgcggcgaggtgggcgcggaggcgg 290
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 acacactcacgcaacacaca 25 |||||||||||||||||||| Sbjct: 42630 acacactcacgcaacacaca 42611
>ref|XM_474956.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3213 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 1601 gagaggaggccaagaacaag 1620
>ref|XM_463123.1| Oryza sativa (japonica cultivar-group), mRNA Length = 773 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 acacactcacgcaacacaca 25 |||||||||||||||||||| Sbjct: 113 acacactcacgcaacacaca 94
>ref|NM_196320.1| Oryza sativa (japonica cultivar-group) putative gag-pol precursor (OSJNBa0011L09.15), mRNA Length = 3339 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 1352 gagaggaggccaagaacaag 1371
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 tcgacggcatcggcgagttc 250 |||||||||||||||||||| Sbjct: 82079 tcgacggcatcggcgagttc 82060
>gb|AF064859.1| Homo sapiens chromosome 21q22.3 PAC 141B3, complete sequence, containing ribosomal protein homologue pseudogene L23a Length = 122571 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 cacacacactcacgcaacacacat 26 ||||||||| |||||||||||||| Sbjct: 68725 cacacacacccacgcaacacacat 68748
>gb|AC135794.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084H09, complete sequence Length = 130151 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 tgccgtcgctgacgacgggg 382 |||||||||||||||||||| Sbjct: 36217 tgccgtcgctgacgacgggg 36236
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01, complete sequence Length = 146432 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 53789 gagaggaggccaagaacaag 53770
>gb|AC093196.2| Drosophila melanogaster clone BACR22H06, complete sequence Length = 173008 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctgccagcttatcagttcca 287 |||||||||||||||||||| Sbjct: 121533 ctgccagcttatcagttcca 121514
>gb|AC009744.8| Drosophila melanogaster clone BACR06G16, complete sequence Length = 179038 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctgccagcttatcagttcca 287 |||||||||||||||||||| Sbjct: 14392 ctgccagcttatcagttcca 14373
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 catcatcgacggcatcggcg 245 |||||||||||||||||||| Sbjct: 2473899 catcatcgacggcatcggcg 2473918
>gb|AC165143.3| Mus musculus BAC clone RP24-391N16 from chromosome 7, complete sequence Length = 165017 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ctcacacacactcacgcaacacac 24 ||||||||||||||| |||||||| Sbjct: 45968 ctcacacacactcacacaacacac 45945
>ref|XM_752573.1| Ustilago maydis 521 hypothetical protein (UM01519.1) partial mRNA Length = 5133 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 aggcggagctggagcagtgg 352 |||||||||||||||||||| Sbjct: 2840 aggcggagctggagcagtgg 2859
>ref|XM_755485.1| Ustilago maydis 521 hypothetical protein (UM04431.1) partial mRNA Length = 5223 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 gaggaggccaagaacaagat 111 |||||||||||||||||||| Sbjct: 4795 gaggaggccaagaacaagat 4814
>gb|AC126260.3| Mus musculus BAC clone RP23-338J1 from chromosome 9, complete sequence Length = 208028 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tccatcttcactgaaaagtgaaaa 49 ||||||||||| |||||||||||| Sbjct: 15168 tccatcttcaccgaaaagtgaaaa 15191
>emb|AL163278.2|HS21C078 Homo sapiens chromosome 21 segment HS21C078 Length = 340000 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 cacacacactcacgcaacacacat 26 ||||||||| |||||||||||||| Sbjct: 310135 cacacacacccacgcaacacacat 310158
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 catcatcgacggcatcggcg 245 |||||||||||||||||||| Sbjct: 653887 catcatcgacggcatcggcg 653906
>emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072N21, complete sequence Length = 130433 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 126301 gagaggaggccaagaacaag 126282
>emb|AJ307671.1|BAC221D7 Mus musculus BAC22107 partial stk33 gene Length = 158201 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ctcacacacactcacgcaacacac 24 ||||||||||||||| |||||||| Sbjct: 98758 ctcacacacactcacacaacacac 98735
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 215 ttcggcgccaccatcatcgacggcatcggcga 246 |||| |||||||||||||| |||| ||||||| Sbjct: 1835833 ttcgccgccaccatcatcggcggcttcggcga 1835864
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete sequence Length = 177565 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 85112 gagaggaggccaagaacaag 85093
>gb|AC145591.5| Mus musculus BAC clone RP24-176N2 from chromosome 18, complete sequence Length = 167532 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 cacacacactcacgcaacacacat 26 ||||||||||||| |||||||||| Sbjct: 60056 cacacacactcacacaacacacat 60079
>gb|AY948318.1| Haliotis discus hannai clone KHdh50 microsatellite sequence Length = 51 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 cacacacactcacgcaacacacat 26 ||||||||||||| |||||||||| Sbjct: 19 cacacacactcacacaacacacat 42
>gb|AC159378.8| Mus musculus 10 BAC RP23-199N18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202745 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaggagaggaggccaagaac 106 |||||||||||||||||||| Sbjct: 139186 gaggagaggaggccaagaac 139205
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 ctcaagggcacggtggtgct 183 |||||||||||||||||||| Sbjct: 2352289 ctcaagggcacggtggtgct 2352308
>gb|AC158596.7| Mus musculus 10 BAC RP23-188F7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207673 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tgaaaagtgaaaaacagtgt 56 |||||||||||||||||||| Sbjct: 31614 tgaaaagtgaaaaacagtgt 31595
>gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A15 genomic sequence, complete sequence Length = 156929 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 57337 gagaggaggccaagaacaag 57356
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 8315788 gagaggaggccaagaacaag 8315769
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 11856616 gagaggaggccaagaacaag 11856597
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 tgccgtcgctgacgacgggg 382 |||||||||||||||||||| Sbjct: 4064555 tgccgtcgctgacgacgggg 4064574
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 12678450 gagaggaggccaagaacaag 12678469
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 9257767 gagaggaggccaagaacaag 9257786
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 12246668 gagaggaggccaagaacaag 12246687
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 23122014 gagaggaggccaagaacaag 23121995
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 27388692 gagaggaggccaagaacaag 27388711
>gb|AF234983.1|AF234983 Phaseolus vulgaris lipoxygenase gene, complete cds Length = 4083 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 176 gtggtgctcatgcgcaagaacgtgctggacctcaac 211 |||||||| ||||||||||| ||| ||||| ||||| Sbjct: 73 gtggtgctgatgcgcaagaatgtgttggacttcaac 108
>gb|AC009953.4| Homo sapiens BAC clone RP11-193F16 from 2, complete sequence Length = 160810 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 28 catcttcactgaaaagtgaaaaacagtg 55 ||||||||||||||| || ||||||||| Sbjct: 99888 catcttcactgaaaactgtaaaacagtg 99915
>dbj|AP004194.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0014E08 Length = 144219 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 71587 gagaggaggccaagaacaag 71606
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0063G05 Length = 182681 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 169209 gagaggaggccaagaacaag 169228
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 cccggctcaagggcacggtggtgc 182 |||||||||| ||||||||||||| Sbjct: 5837219 cccggctcaacggcacggtggtgc 5837242
>dbj|AP005684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1742_G01 Length = 154912 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 83058 gagaggaggccaagaacaag 83077
>dbj|AP006556.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1010G04a Length = 61450 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 27331 gagaggaggccaagaacaag 27350
>dbj|AK070268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044E14, full insert sequence Length = 773 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 acacactcacgcaacacaca 25 |||||||||||||||||||| Sbjct: 113 acacactcacgcaacacaca 94
>dbj|AK063747.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-G06, full insert sequence Length = 667 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 tgccgtcgctgacgacgggg 382 |||||||||||||||||||| Sbjct: 168 tgccgtcgctgacgacgggg 187
>emb|AM236600.1| Fusarium oxysporum f. sp. lycopersici orx1 gene for putative oxidoreductase, exons 1-8 Length = 2254 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 289 cgccgtcgaccaagacaacggcgg 312 |||||||||||||| ||||||||| Sbjct: 875 cgccgtcgaccaagccaacggcgg 898
>gb|AE003626.4| Drosophila melanogaster chromosome 2L, section 35 of 83 of the complete sequence Length = 264919 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctgccagcttatcagttcca 287 |||||||||||||||||||| Sbjct: 196622 ctgccagcttatcagttcca 196603
>gb|AC115689.22| Mus musculus chromosome 9, clone RP23-166A9, complete sequence Length = 221548 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tccatcttcactgaaaagtgaaaa 49 ||||||||||| |||||||||||| Sbjct: 93451 tccatcttcaccgaaaagtgaaaa 93428
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 catcatcgacggcatcggcg 245 |||||||||||||||||||| Sbjct: 2354751 catcatcgacggcatcggcg 2354732
>gb|AC153373.4| Mus musculus 6 BAC RP23-100J14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 218409 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 ctcacacacactcacgcaacacac 24 ||||||||||| |||||||||||| Sbjct: 27818 ctcacacacacacacgcaacacac 27841
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 12685790 gagaggaggccaagaacaag 12685809
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 tgccgtcgctgacgacgggg 382 |||||||||||||||||||| Sbjct: 4073249 tgccgtcgctgacgacgggg 4073268
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 11856287 gagaggaggccaagaacaag 11856268
>gb|AC005135.1|AC005135 Drosophila melanogaster DNA sequence (P1 DS07070 (D331)), complete sequence Length = 67297 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctgccagcttatcagttcca 287 |||||||||||||||||||| Sbjct: 47178 ctgccagcttatcagttcca 47159
>emb|AL731592.2|OSJN00242 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B17, complete sequence Length = 99093 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gagaggaggccaagaacaag 109 |||||||||||||||||||| Sbjct: 28356 gagaggaggccaagaacaag 28337
>gb|U42336.1|TAU42336 Triticum aestivum ACC synthase (TA-ACS2) gene, complete cds Length = 5590 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 329 gcggaggcggagctggagcagtgg 352 ||||||||||||||||||| |||| Sbjct: 2640 gcggaggcggagctggagctgtgg 2663
>gb|AC153605.2| Mus musculus 6 BAC RP23-346H23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 229744 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ctcacacacactcacgcaacacac 24 ||||||||||| |||||||||||| Sbjct: 26441 ctcacacacacacacgcaacacac 26418
>gb|AC153955.3| Mus musculus 10 BAC RP24-167A12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 154271 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tgaaaagtgaaaaacagtgt 56 |||||||||||||||||||| Sbjct: 70085 tgaaaagtgaaaaacagtgt 70104 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,711,454 Number of Sequences: 3902068 Number of extensions: 3711454 Number of successful extensions: 87253 Number of sequences better than 10.0: 99 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85686 Number of HSP's gapped (non-prelim): 1559 length of query: 417 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 395 effective length of database: 17,147,199,772 effective search space: 6773143909940 effective search space used: 6773143909940 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)