Clone Name | bastl47c04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PUR6_CRYNV (P0C017) Phosphoribosylaminoimidazole carboxylase (EC... | 28 | 8.9 | 2 | DMXL1_HUMAN (Q9Y485) Protein DmX-like 1 (X-like 1 protein) | 28 | 8.9 |
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>PUR6_CRYNV (P0C017) Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)| (AIR carboxylase) (AIRC) Length = 582 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = +1 Query: 127 RHLSCPALVL-LPSLFLQQGHLRLVPSAGPTEQVLLPPDSHS 249 R L+ PA +L +P L L G S P +Q LLPP SHS Sbjct: 17 RMLTHPAALLGIPLLILDSG------SFTPAKQTLLPPPSHS 52
>DMXL1_HUMAN (Q9Y485) Protein DmX-like 1 (X-like 1 protein)| Length = 3027 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -3 Query: 451 ALAIASHTGPAPFAQGGHHFHR 386 +LA+ +HTG P Q HH HR Sbjct: 324 SLALVAHTGYLPHQQDPHHVHR 345 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,382,947 Number of Sequences: 219361 Number of extensions: 1016187 Number of successful extensions: 2396 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2364 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2396 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)