ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl47c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome... 113 4e-22
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 113 4e-22
3dbj|AK102797.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 4e-22
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 113 4e-22
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
6dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
7dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
8dbj|AK102783.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
9gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 48 0.021
10ref|XM_472476.1| Oryza sativa (japonica cultivar-group), predic... 46 0.082
11emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4,... 46 0.082
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.082
13ref|XM_483743.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.32
14ref|XM_507331.1| PREDICTED Oryza sativa (japonica cultivar-group... 44 0.32
15ref|XM_863626.1| PREDICTED: Canis familiaris hypothetical protei... 44 0.32
16gb|AC092728.2| Canis familiaris clone RP81-237O17, complete sequ... 44 0.32
17gb|BT009018.1| Triticum aestivum clone wdk3c.pk006.n12:fis, full... 44 0.32
18emb|AL606589.3|OSJN00021 Oryza sativa genomic DNA, chromosome 4,... 44 0.32
19dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
20dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
21dbj|AP006562.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
22dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
23dbj|AK105901.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.32
24dbj|AK070743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.32
25ref|XM_550310.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
26ref|XM_468025.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
27gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.3
28gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
29gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
30gb|AF297189.1| Cyprinus carpio kidney Na/Pi cotransporter NaPi-I... 42 1.3
31gb|AC158240.5| Pan troglodytes BAC clone CH251-542M19 from chrom... 42 1.3
32gb|AC069382.9| Homo sapiens chromosome 15, clone RP11-360J18, co... 42 1.3
33gb|AC022613.13| Homo sapiens chromosome 15, clone RP11-680F8, co... 42 1.3
34dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
35dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
36gb|DQ015919.1| Homo sapiens tight junction protein 1 (zona occlu... 42 1.3
37dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
38ref|XM_345484.1| PREDICTED: Rattus norvegicus neurotensin recept... 42 1.3
39dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 42 1.3
40dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
41dbj|AK072257.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
42gb|AE017221.1| Thermus thermophilus HB27, complete genome 42 1.3
43emb|AL590876.20| Mouse DNA sequence from clone RP23-53K18 on chr... 42 1.3
44ref|XM_464045.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.0
45gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence 40 5.0
46gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 40 5.0
47gb|AC132412.2| Mus musculus BAC clone RP23-355N5 from chromosome... 40 5.0
48gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
49gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
50gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.0
51gb|U58748.1| Caenorhabditis elegans cosmid ZK180, complete sequence 40 5.0
52ref|XM_993116.1| PREDICTED: Mus musculus hypothetical protein LO... 40 5.0
53ref|XM_976794.1| PREDICTED: Mus musculus hypothetical protein LO... 40 5.0
54ref|XM_538829.2| PREDICTED: Canis familiaris similar to Radiatio... 40 5.0
55ref|XM_859034.1| PREDICTED: Canis familiaris similar to papillar... 40 5.0
56ref|XM_846534.1| PREDICTED: Canis familiaris similar to papillar... 40 5.0
57emb|AJ243905.1|CEL243905 Caenorhabditis elegans mRNA for SF1 pro... 40 5.0
58gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 5.0
59ref|XM_504099.1| Yarrowia lipolytica CLIB122, YALI0E18304g predi... 40 5.0
60emb|BX010236.1|CNS08G28 Single read from an extremity of a full-... 40 5.0
61gb|AY699111.1| Gossypium harknessii voucher D2-2 (ISC) alcohol d... 40 5.0
62emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 40 5.0
63emb|AL161589.2|ATCHRIV85 Arabidopsis thaliana DNA chromosome 4, ... 40 5.0
64emb|AL022141.1|ATF23E13 Arabidopsis thaliana DNA chromosome 4, B... 40 5.0
65gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, comple... 40 5.0
66gb|AC123568.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 5.0
67dbj|AK163390.1| Mus musculus 2 cells egg cDNA, RIKEN full-length... 40 5.0
68dbj|AK006608.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 5.0
69ref|NM_070632.2| Caenorhabditis elegans Y116A8C.32 (Y116A8C.32) ... 40 5.0
70dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
71dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
72gb|AF342999.1|AF342999 Mus musculus axonemal dynein heavy chain ... 40 5.0
73gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.0
74dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
75dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
76dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
77dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
78dbj|AK070370.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
79dbj|AK069843.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
80emb|AL117204.1|CEY116A8C Caenorhabditis elegans YAC Y116A8C, com... 40 5.0
81dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, com... 40 5.0
82gb|AC174471.2| Mus musculus BAC clone RP23-360P3 from chromosome... 40 5.0
83emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 5.0
84gb|DQ138934.1| Drosophila simulans strain Ky-b CG12105 gene, par... 40 5.0
85gb|DQ138933.1| Drosophila simulans strain Ky-a CG12105 gene, par... 40 5.0
86gb|AC166166.2| Mus musculus BAC clone RP23-293B18 from chromosom... 40 5.0
87gb|AC118475.44| Mus musculus chromosome 13, clone RP23-359G8, co... 40 5.0
88emb|AL662835.11| Mouse DNA sequence from clone RP23-458A23 on ch... 40 5.0 
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0052H02, complete sequence
          Length = 159632

 Score =  113 bits (57), Expect = 4e-22
 Identities = 117/137 (85%)
 Strand = Plus / Plus

                                                                         
Query: 130   gcggcgggggagggggcgctctccttcctctcccggagcctgcgggaggacctgcgcctc 189
             |||||||||||||||||||| || ||||| || ||  |||| |||||||||||||| || 
Sbjct: 80473 gcggcgggggagggggcgctgtcgttcctgtcgcgcggcctccgggaggacctgcggctg 80532

                                                                         
Query: 190   atccgcgcgcgggccggggagctcgagaccttcctcagcgcgccggtcccggagcccgac 249
             |||||||||||||| |||||||| ||||| ||||| | ||||||||| |||||||| || 
Sbjct: 80533 atccgcgcgcgggcgggggagctggagacgttcctgaccgcgccggtgccggagccggag 80592

                              
Query: 250   ctcttcgcgcgcctccg 266
             ||  ||||||| |||||
Sbjct: 80593 ctgctcgcgcggctccg 80609
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  113 bits (57), Expect = 4e-22
 Identities = 117/137 (85%)
 Strand = Plus / Plus

                                                                           
Query: 130     gcggcgggggagggggcgctctccttcctctcccggagcctgcgggaggacctgcgcctc 189
               |||||||||||||||||||| || ||||| || ||  |||| |||||||||||||| || 
Sbjct: 2800666 gcggcgggggagggggcgctgtcgttcctgtcgcgcggcctccgggaggacctgcggctg 2800725

                                                                           
Query: 190     atccgcgcgcgggccggggagctcgagaccttcctcagcgcgccggtcccggagcccgac 249
               |||||||||||||| |||||||| ||||| ||||| | ||||||||| |||||||| || 
Sbjct: 2800726 atccgcgcgcgggcgggggagctggagacgttcctgaccgcgccggtgccggagccggag 2800785

                                
Query: 250     ctcttcgcgcgcctccg 266
               ||  ||||||| |||||
Sbjct: 2800786 ctgctcgcgcggctccg 2800802



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 281      ccacctcctcctccggctccgcctc 305
                ||||||||||||||| |||||||||
Sbjct: 21324792 ccacctcctcctccgcctccgcctc 21324768
to top
>dbj|AK102797.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108D09, full
           insert sequence
          Length = 2625

 Score =  113 bits (57), Expect = 4e-22
 Identities = 117/137 (85%)
 Strand = Plus / Plus

                                                                       
Query: 130 gcggcgggggagggggcgctctccttcctctcccggagcctgcgggaggacctgcgcctc 189
           |||||||||||||||||||| || ||||| || ||  |||| |||||||||||||| || 
Sbjct: 257 gcggcgggggagggggcgctgtcgttcctgtcgcgcggcctccgggaggacctgcggctg 316

                                                                       
Query: 190 atccgcgcgcgggccggggagctcgagaccttcctcagcgcgccggtcccggagcccgac 249
           |||||||||||||| |||||||| ||||| ||||| | ||||||||| |||||||| || 
Sbjct: 317 atccgcgcgcgggcgggggagctggagacgttcctgaccgcgccggtgccggagccggag 376

                            
Query: 250 ctcttcgcgcgcctccg 266
           ||  ||||||| |||||
Sbjct: 377 ctgctcgcgcggctccg 393
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  113 bits (57), Expect = 4e-22
 Identities = 117/137 (85%)
 Strand = Plus / Plus

                                                                           
Query: 130     gcggcgggggagggggcgctctccttcctctcccggagcctgcgggaggacctgcgcctc 189
               |||||||||||||||||||| || ||||| || ||  |||| |||||||||||||| || 
Sbjct: 2809697 gcggcgggggagggggcgctgtcgttcctgtcgcgcggcctccgggaggacctgcggctg 2809756

                                                                           
Query: 190     atccgcgcgcgggccggggagctcgagaccttcctcagcgcgccggtcccggagcccgac 249
               |||||||||||||| |||||||| ||||| ||||| | ||||||||| |||||||| || 
Sbjct: 2809757 atccgcgcgcgggcgggggagctggagacgttcctgaccgcgccggtgccggagccggag 2809816

                                
Query: 250     ctcttcgcgcgcctccg 266
               ||  ||||||| |||||
Sbjct: 2809817 ctgctcgcgcggctccg 2809833



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 281      ccacctcctcctccggctccgcctc 305
                ||||||||||||||| |||||||||
Sbjct: 21634991 ccacctcctcctccgcctccgcctc 21634967
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                            
Query: 277     aacaccacctcctcctccggctccgcctc 305
               ||||||||||||||||||| |||||||||
Sbjct: 1447170 aacaccacctcctcctccgcctccgcctc 1447198



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 281      ccacctcctcctccggctccg 301
                |||||||||||||||||||||
Sbjct: 32619064 ccacctcctcctccggctccg 32619084



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 284     cctcctcctccggctccgcc 303
               ||||||||||||||||||||
Sbjct: 1882364 cctcctcctccggctccgcc 1882383
to top
>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0482F12
          Length = 147735

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 277    aacaccacctcctcctccggctccgcctc 305
              ||||||||||||||||||| |||||||||
Sbjct: 128442 aacaccacctcctcctccgcctccgcctc 128470
to top
>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0576F08
          Length = 135314

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 277   aacaccacctcctcctccggctccgcctc 305
             ||||||||||||||||||| |||||||||
Sbjct: 10591 aacaccacctcctcctccgcctccgcctc 10619
to top
>dbj|AK102783.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107K13, full
           insert sequence
          Length = 2448

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 277 aacaccacctcctcctccggctccgcctc 305
           ||||||||||||||||||| |||||||||
Sbjct: 33  aacaccacctcctcctccgcctccgcctc 61
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 211     ctcgagaccttcctcagcgcgccggtcc 238
               |||||||||||| |||||||||||||||
Sbjct: 4405181 ctcgagaccttcatcagcgcgccggtcc 4405208
to top
>ref|XM_472476.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1866

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 125 ccgccgcggcgggggagggggcg 147
           |||||||||||||||||||||||
Sbjct: 241 ccgccgcggcgggggagggggcg 219
to top
>emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028I23,
              complete sequence
          Length = 148736

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 125    ccgccgcggcgggggagggggcg 147
              |||||||||||||||||||||||
Sbjct: 113848 ccgccgcggcgggggagggggcg 113870
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 125      ccgccgcggcgggggagggggcg 147
                |||||||||||||||||||||||
Sbjct: 20867023 ccgccgcggcgggggagggggcg 20867045



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 284      cctcctcctccggctccgcctc 305
                ||||||||||||||||||||||
Sbjct: 15867046 cctcctcctccggctccgcctc 15867067
to top
>ref|XM_483743.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1233

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 279 caccacctcctcctccggctccgcct 304
           ||||||||||||||||| ||||||||
Sbjct: 382 caccacctcctcctccgcctccgcct 357
to top
>ref|XM_507331.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.19-2
           mRNA
          Length = 1302

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 279 caccacctcctcctccggctccgcct 304
           ||||||||||||||||| ||||||||
Sbjct: 376 caccacctcctcctccgcctccgcct 351
to top
>ref|XM_863626.1| PREDICTED: Canis familiaris hypothetical protein LOC612325
           (LOC612325), mRNA
          Length = 2285

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 129 cgcggcgggggagggggcgctc 150
           ||||||||||||||||||||||
Sbjct: 49  cgcggcgggggagggggcgctc 28
to top
>gb|AC092728.2| Canis familiaris clone RP81-237O17, complete sequence
          Length = 141578

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 124   cccgccgcggcgggggaggggg 145
             ||||||||||||||||||||||
Sbjct: 87872 cccgccgcggcgggggaggggg 87893
to top
>gb|BT009018.1| Triticum aestivum clone wdk3c.pk006.n12:fis, full insert mRNA
           sequence
          Length = 1129

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 284 cctcctcctccggctccgcctc 305
           ||||||||||||||||||||||
Sbjct: 114 cctcctcctccggctccgcctc 93



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 284 cctcctcctccggctccgcc 303
           ||||||||||||||||||||
Sbjct: 96  cctcctcctccggctccgcc 77
to top
>emb|AL606589.3|OSJN00021 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008A08,
             complete sequence
          Length = 130521

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 284   cctcctcctccggctccgcctc 305
             ||||||||||||||||||||||
Sbjct: 53611 cctcctcctccggctccgcctc 53632
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 279      caccacctcctcctccggctcc 300
                ||||||||||||||||||||||
Sbjct: 13539777 caccacctcctcctccggctcc 13539756
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 279      caccacctcctcctccggctccgcct 304
                ||||||||||||||||| ||||||||
Sbjct: 27874561 caccacctcctcctccgcctccgcct 27874586
to top
>dbj|AP006562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1175F05
          Length = 126842

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 279    caccacctcctcctccggctcc 300
              ||||||||||||||||||||||
Sbjct: 114705 caccacctcctcctccggctcc 114684
to top
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1150_A11
          Length = 142010

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 279   caccacctcctcctccggctccgcct 304
             ||||||||||||||||| ||||||||
Sbjct: 82639 caccacctcctcctccgcctccgcct 82664
to top
>dbj|AK105901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F09, full
           insert sequence
          Length = 1230

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 279 caccacctcctcctccggctccgcct 304
           ||||||||||||||||| ||||||||
Sbjct: 379 caccacctcctcctccgcctccgcct 354
to top
>dbj|AK070743.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062K14, full
           insert sequence
          Length = 1302

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 279 caccacctcctcctccggctccgcct 304
           ||||||||||||||||| ||||||||
Sbjct: 376 caccacctcctcctccgcctccgcct 351
to top
>ref|XM_550310.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 861

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 125 ccgccgcggcgggggaggggg 145
           |||||||||||||||||||||
Sbjct: 101 ccgccgcggcgggggaggggg 121
to top
>ref|XM_468025.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 357

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 281 ccacctcctcctccggctccg 301
           |||||||||||||||||||||
Sbjct: 280 ccacctcctcctccggctccg 260
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 107     tcggcgtcgacacgcgccccgccgc 131
               ||||||||||||||||| |||||||
Sbjct: 1885399 tcggcgtcgacacgcgcgccgccgc 1885423
to top
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09,
              complete sequence
          Length = 167318

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 281    ccacctcctcctccggctccgcctc 305
              ||||||||||||||| |||||||||
Sbjct: 122862 ccacctcctcctccgtctccgcctc 122886
to top
>gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0480H08, complete sequence
          Length = 156301

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 281   ccacctcctcctccggctccgcctc 305
             ||||||||||||||| |||||||||
Sbjct: 82264 ccacctcctcctccgcctccgcctc 82240
to top
>gb|AF297189.1| Cyprinus carpio kidney Na/Pi cotransporter NaPi-IIb2 mRNA, partial
           cds
          Length = 2264

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 281 ccacctcctcctccggctccg 301
           |||||||||||||||||||||
Sbjct: 136 ccacctcctcctccggctccg 116
to top
>gb|AC158240.5| Pan troglodytes BAC clone CH251-542M19 from chromosome unknown,
             complete sequence
          Length = 217064

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 123   ccccgccgcggcgggggagggggcg 147
             |||||||||||| ||||||||||||
Sbjct: 61170 ccccgccgcggccggggagggggcg 61146
to top
>gb|AC069382.9| Homo sapiens chromosome 15, clone RP11-360J18, complete sequence
          Length = 193681

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 127   gccgcggcgggggagggggcg 147
             |||||||||||||||||||||
Sbjct: 71413 gccgcggcgggggagggggcg 71433
to top
>gb|AC022613.13| Homo sapiens chromosome 15, clone RP11-680F8, complete sequence
          Length = 188117

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 127    gccgcggcgggggagggggcg 147
              |||||||||||||||||||||
Sbjct: 178066 gccgcggcgggggagggggcg 178086
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 281      ccacctcctcctccggctccgcctc 305
                ||||||||||||||| |||||||||
Sbjct: 17862908 ccacctcctcctccgtctccgcctc 17862932



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 281     ccacctcctcctccggctcc 300
               ||||||||||||||||||||
Sbjct: 6773804 ccacctcctcctccggctcc 6773823
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 125     ccgccgcggcgggggaggggg 145
               |||||||||||||||||||||
Sbjct: 3899094 ccgccgcggcgggggaggggg 3899114
to top
>gb|DQ015919.1| Homo sapiens tight junction protein 1 (zona occludens 1) (TJP1) gene,
            complete cds
          Length = 125625

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 127  gccgcggcgggggagggggcg 147
            |||||||||||||||||||||
Sbjct: 1232 gccgcggcgggggagggggcg 1212
to top
>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0013F10
          Length = 163095

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 125   ccgccgcggcgggggaggggg 145
             |||||||||||||||||||||
Sbjct: 20998 ccgccgcggcgggggaggggg 21018
to top
>ref|XM_345484.1| PREDICTED: Rattus norvegicus neurotensin receptor (predicted)
           (Ntsr_predicted), mRNA
          Length = 1275

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  gccatatggctagcttcggcg 112
           |||||||||||||||||||||
Sbjct: 574 gccatatggctagcttcggcg 594
to top
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 290   cctccggctccgcctcgggga 310
             |||||||||||||||||||||
Sbjct: 81879 cctccggctccgcctcgggga 81859
to top
>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1611_C08
          Length = 135386

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 281   ccacctcctcctccggctccg 301
             |||||||||||||||||||||
Sbjct: 46435 ccacctcctcctccggctccg 46455
to top
>dbj|AK072257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008H18, full
           insert sequence
          Length = 1804

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 281 ccacctcctcctccggctccgcctc 305
           ||||||||||||||| |||||||||
Sbjct: 91  ccacctcctcctccgcctccgcctc 115
to top
>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 290     cctccggctccgcctcgggga 310
               |||||||||||||||||||||
Sbjct: 1830895 cctccggctccgcctcgggga 1830915
to top
>emb|AL590876.20| Mouse DNA sequence from clone RP23-53K18 on chromosome X, complete
             sequence
          Length = 67297

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 136   ggggagggggcgctctccttc 156
             |||||||||||||||||||||
Sbjct: 25514 ggggagggggcgctctccttc 25494
to top
>ref|XM_464045.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1355

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 284 cctcctcctccggctccgcc 303
           ||||||||||||||||||||
Sbjct: 112 cctcctcctccggctccgcc 93
to top
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence
          Length = 211664

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 284    cctcctcctccggctccgcc 303
              ||||||||||||||||||||
Sbjct: 146411 cctcctcctccggctccgcc 146430
to top
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 348   ggcgttcgaggccgaggtcg 367
             ||||||||||||||||||||
Sbjct: 15572 ggcgttcgaggccgaggtcg 15591
to top
>gb|AC132412.2| Mus musculus BAC clone RP23-355N5 from chromosome 6, complete sequence
          Length = 171747

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   ccgccgcggcgggggagggg 144
             ||||||||||||||||||||
Sbjct: 96281 ccgccgcggcgggggagggg 96300
to top
>gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0074P11, complete sequence
          Length = 148753

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 281  ccacctcctcctccggctcc 300
            ||||||||||||||||||||
Sbjct: 4758 ccacctcctcctccggctcc 4777
to top
>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08,
             complete sequence
          Length = 94286

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   ccacctcctcctccggctcc 300
             ||||||||||||||||||||
Sbjct: 78065 ccacctcctcctccggctcc 78084
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 279     caccacctcctcctccggctccgcctcg 306
               ||||||||||||| ||| ||||||||||
Sbjct: 5412343 caccacctcctccgccgcctccgcctcg 5412370
to top
>gb|U58748.1| Caenorhabditis elegans cosmid ZK180, complete sequence
          Length = 37895

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   caccacctcctcctccggct 298
             ||||||||||||||||||||
Sbjct: 27938 caccacctcctcctccggct 27957
to top
>ref|XM_993116.1| PREDICTED: Mus musculus hypothetical protein LOC672387 (LOC672387),
           mRNA
          Length = 423

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 125 ccgccgcggcgggggagggg 144
           ||||||||||||||||||||
Sbjct: 203 ccgccgcggcgggggagggg 222
to top
>ref|XM_976794.1| PREDICTED: Mus musculus hypothetical protein LOC665417 (LOC665417),
           mRNA
          Length = 423

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 125 ccgccgcggcgggggagggg 144
           ||||||||||||||||||||
Sbjct: 203 ccgccgcggcgggggagggg 222
to top
>ref|XM_538829.2| PREDICTED: Canis familiaris similar to Radiation-inducible
           immediate-early gene IEX-1 (Immediate early protein
           GLY96) (Immediate early response 3 protein)
           (PACAP-responsive gene 1 protein) (PRG1 protein)
           (Differentiation-dependent gene 2 protein) (DIF-2
           protein)... (LOC481708), mRNA
          Length = 802

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 155 tcctctcccggagcctgcgg 174
           ||||||||||||||||||||
Sbjct: 123 tcctctcccggagcctgcgg 142
to top
>ref|XM_859034.1| PREDICTED: Canis familiaris similar to papillary renal cell
           carcinoma translocation-associated gene product isoform
           2, transcript variant 2 (LOC610063), mRNA
          Length = 1593

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 284 cctcctcctccggctccgcctcgg 307
           |||||||||||||||||| |||||
Sbjct: 292 cctcctcctccggctccggctcgg 269
to top
>ref|XM_846534.1| PREDICTED: Canis familiaris similar to papillary renal cell
           carcinoma translocation-associated gene product isoform
           2, transcript variant 1 (LOC610063), mRNA
          Length = 1691

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 284 cctcctcctccggctccgcctcgg 307
           |||||||||||||||||| |||||
Sbjct: 292 cctcctcctccggctccggctcgg 269
to top
>emb|AJ243905.1|CEL243905 Caenorhabditis elegans mRNA for SF1 protein (sf1 gene)
          Length = 2440

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 281  ccacctcctcctccggctcc 300
            ||||||||||||||||||||
Sbjct: 1520 ccacctcctcctccggctcc 1501
to top
>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0009J13, from chromosome 3, complete sequence
          Length = 147205

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 279    caccacctcctcctccggctccgcctcg 306
              ||||||||||||| ||| ||||||||||
Sbjct: 118511 caccacctcctccgccgcctccgcctcg 118538
to top
>ref|XM_504099.1| Yarrowia lipolytica CLIB122, YALI0E18304g predicted mRNA
          Length = 1065

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 ccacctcctcctccggctcc 300
           ||||||||||||||||||||
Sbjct: 46  ccacctcctcctccggctcc 65
to top
>emb|BX010236.1|CNS08G28 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA16BH09 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 422

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 281 ccacctcctcctccggctccgcct 304
           ||||||||||||||||| ||||||
Sbjct: 300 ccacctcctcctccggcaccgcct 323
to top
>gb|AY699111.1| Gossypium harknessii voucher D2-2 (ISC) alcohol dehydrogenase C
           (AdhC) gene, partial cds
          Length = 759

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 ccgcaaggcctacaacacca 283
           ||||||||||||||||||||
Sbjct: 246 ccgcaaggcctacaacacca 227
to top
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 127  gccgcggcgggggagggggcgctc 150
            ||||||||| ||||||||||||||
Sbjct: 1233 gccgcggcgcgggagggggcgctc 1210
to top
>emb|AL161589.2|ATCHRIV85 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 85
          Length = 198750

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 279   caccacctcctcctccggctccgcctcg 306
             ||||||||||||||||| ||||| ||||
Sbjct: 27179 caccacctcctcctccgcctccggctcg 27152
to top
>emb|AL022141.1|ATF23E13 Arabidopsis thaliana DNA chromosome 4, BAC clone F23E13 (ESSAII
             project)
          Length = 94695

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 279   caccacctcctcctccggctccgcctcg 306
             ||||||||||||||||| ||||| ||||
Sbjct: 50458 caccacctcctcctccgcctccggctcg 50431
to top
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome
          Length = 156789

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   gcgccccgccgcggcggggg 139
             ||||||||||||||||||||
Sbjct: 32205 gcgccccgccgcggcggggg 32186
to top
>gb|AC123568.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OJ1345H02, from chromosome 3, complete sequence
          Length = 145290

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 279  caccacctcctcctccggctccgcctcg 306
            ||||||||||||| ||| ||||||||||
Sbjct: 8937 caccacctcctccgccgcctccgcctcg 8964
to top
>dbj|AK163390.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
           clone:B020031F10 product:Vasculin homolog [Homo
           sapiens], full insert sequence
          Length = 3131

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 284 cctcctcctccggctccgcc 303
           ||||||||||||||||||||
Sbjct: 4   cctcctcctccggctccgcc 23
to top
>dbj|AK006608.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700034P14 product:hypothetical protein,
           full insert sequence
          Length = 484

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 284 cctcctcctccggctccgcc 303
           ||||||||||||||||||||
Sbjct: 21  cctcctcctccggctccgcc 40
to top
>ref|NM_070632.2| Caenorhabditis elegans Y116A8C.32 (Y116A8C.32) mRNA, complete cds
          Length = 2440

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 281  ccacctcctcctccggctcc 300
            ||||||||||||||||||||
Sbjct: 1520 ccacctcctcctccggctcc 1501
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 126     cgccgcggcgggggaggggg 145
               ||||||||||||||||||||
Sbjct: 7165695 cgccgcggcgggggaggggg 7165714
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 279     caccacctcctcctccggctccgcctcg 306
               ||||||||||||| ||| ||||||||||
Sbjct: 5411558 caccacctcctccgccgcctccgcctcg 5411585
to top
>gb|AF342999.1|AF342999 Mus musculus axonemal dynein heavy chain 8 Dnahc8 gene, partial cds
          Length = 150164

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 140   agggggcgctctccttcctctccc 163
             ||||||||||||||| ||||||||
Sbjct: 64053 agggggcgctctcctgcctctccc 64076
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 251     tcttcgcgcgcctccgcaag 270
               ||||||||||||||||||||
Sbjct: 4089261 tcttcgcgcgcctccgcaag 4089280



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 287     cctcctccggctccgcctcg 306
               ||||||||||||||||||||
Sbjct: 2503821 cctcctccggctccgcctcg 2503840



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 281    ccacctcctcctccggctcc 300
              ||||||||||||||||||||
Sbjct: 550654 ccacctcctcctccggctcc 550635
to top
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0068B06
          Length = 143712

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   cgccgcggcgggggaggggg 145
             ||||||||||||||||||||
Sbjct: 43106 cgccgcggcgggggaggggg 43125
to top
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
           BAC clone:OSJNBa0052G07
          Length = 156207

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 126 cgccgcggcgggggaggggg 145
           ||||||||||||||||||||
Sbjct: 699 cgccgcggcgggggaggggg 718
to top
>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0081C13
          Length = 144624

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   cctcctcctccggctccgcc 303
             ||||||||||||||||||||
Sbjct: 21925 cctcctcctccggctccgcc 21944
to top
>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0585B01
          Length = 133231

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 284    cctcctcctccggctccgcc 303
              ||||||||||||||||||||
Sbjct: 119008 cctcctcctccggctccgcc 119027
to top
>dbj|AK070370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049F22, full
           insert sequence
          Length = 1881

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 279 caccacctcctcctccggctccgcctcg 306
           ||||||||||||| ||| ||||||||||
Sbjct: 129 caccacctcctccgccgcctccgcctcg 102
to top
>dbj|AK069843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034H09, full
           insert sequence
          Length = 1355

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 284 cctcctcctccggctccgcc 303
           ||||||||||||||||||||
Sbjct: 112 cctcctcctccggctccgcc 93
to top
>emb|AL117204.1|CEY116A8C Caenorhabditis elegans YAC Y116A8C, complete sequence
          Length = 260341

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 281    ccacctcctcctccggctcc 300
              ||||||||||||||||||||
Sbjct: 205738 ccacctcctcctccggctcc 205757
to top
>dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, complete sequence
          Length = 106873

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   gcgccccgccgcggcggggg 139
             ||||||||||||||||||||
Sbjct: 23265 gcgccccgccgcggcggggg 23246
to top
>gb|AC174471.2| Mus musculus BAC clone RP23-360P3 from chromosome 17, complete sequence
          Length = 218275

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 140    agggggcgctctccttcctctccc 163
              ||||||||||||||| ||||||||
Sbjct: 121585 agggggcgctctcctgcctctccc 121608
to top
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 281     ccacctcctcctccggctcc 300
               ||||||||||||||||||||
Sbjct: 2188802 ccacctcctcctccggctcc 2188821
to top
>gb|DQ138934.1| Drosophila simulans strain Ky-b CG12105 gene, partial cds
          Length = 4200

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 278 acaccacctcctcctccggctccgcctc 305
           |||||| ||||||||||| |||||||||
Sbjct: 512 acaccagctcctcctccgcctccgcctc 485
to top
>gb|DQ138933.1| Drosophila simulans strain Ky-a CG12105 gene, partial cds
          Length = 4140

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 278 acaccacctcctcctccggctccgcctc 305
           |||||| ||||||||||| |||||||||
Sbjct: 506 acaccagctcctcctccgcctccgcctc 479
to top
>gb|AC166166.2| Mus musculus BAC clone RP23-293B18 from chromosome 17, complete sequence
          Length = 177378

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 140    agggggcgctctccttcctctccc 163
              ||||||||||||||| ||||||||
Sbjct: 128589 agggggcgctctcctgcctctccc 128566
to top
>gb|AC118475.44| Mus musculus chromosome 13, clone RP23-359G8, complete sequence
          Length = 190284

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   cctcctcctccggctccgcc 303
             ||||||||||||||||||||
Sbjct: 67720 cctcctcctccggctccgcc 67739
to top
>emb|AL662835.11| Mouse DNA sequence from clone RP23-458A23 on chromosome 11, complete
              sequence
          Length = 162024

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 278    acaccacctcctcctccggctccgcctc 305
              ||||||||||||||||| ||||| ||||
Sbjct: 159264 acaccacctcctcctccagctccccctc 159237


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,015,094
Number of Sequences: 3902068
Number of extensions: 3015094
Number of successful extensions: 74052
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72121
Number of HSP's gapped (non-prelim): 1931
length of query: 378
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 356
effective length of database: 17,147,199,772
effective search space: 6104403118832
effective search space used: 6104403118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top