>emb|CR974589.6| Mouse DNA sequence from clone RP23-77B14 on chromosome 12, complete
              sequence
          Length = 198849

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 313    tccaccactctctttcttgct 333
              |||||||||||||||||||||
Sbjct: 176294 tccaccactctctttcttgct 176274

>gb|AC020763.6| Homo sapiens chromosome 16 clone RP11-394B2, complete sequence
          Length = 200838

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 320   ctctctttcttgctgcttctt 340
             |||||||||||||||||||||
Sbjct: 94738 ctctctttcttgctgcttctt 94758

>emb|AL672193.10| Mouse DNA sequence from clone RP23-443O18 on chromosome X, complete
              sequence
          Length = 210236

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 309    agtttccaccactctctttct 329
              |||||||||||||||||||||
Sbjct: 114161 agtttccaccactctctttct 114181

>ref|XM_480869.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 204

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 212 gagccaccgccgcacgccgc 231
           ||||||||||||||||||||
Sbjct: 86  gagccaccgccgcacgccgc 67

>ref|XM_467257.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 567

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 214 gccaccgccgcacgccgccc 233
           ||||||||||||||||||||
Sbjct: 478 gccaccgccgcacgccgccc 459

>ref|NM_187255.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 903

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 214 gccaccgccgcacgccgccc 233
           ||||||||||||||||||||
Sbjct: 256 gccaccgccgcacgccgccc 237

>gb|AC158958.4| Mus musculus chromosome 1, clone RP23-31E12, complete sequence
          Length = 213244

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    ccccatcccggagcaccccg 194
              ||||||||||||||||||||
Sbjct: 126654 ccccatcccggagcaccccg 126635

>gb|AY448012.1|AY448010S3 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig
            SR3
          Length = 31590

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 148  taattatagtcgtcgtcgtcgtag 171
            |||| |||||||||||||||||||
Sbjct: 7526 taataatagtcgtcgtcgtcgtag 7503

>gb|AC132109.3| Mus musculus BAC clone RP24-172E19 from chromosome 1, complete sequence
          Length = 156695

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   ctttcttgctgcttcttaat 343
             ||||||||||||||||||||
Sbjct: 65579 ctttcttgctgcttcttaat 65598

>gb|AC121883.2| Mus musculus BAC clone RP24-137J17 from 1, complete sequence
          Length = 185532

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   ctttcttgctgcttcttaat 343
             ||||||||||||||||||||
Sbjct: 43083 ctttcttgctgcttcttaat 43064

>gb|AC152347.14| Medicago truncatula clone mth2-28c12, complete sequence
          Length = 112461

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 323   tctttcttgctgcttcttaa 342
             ||||||||||||||||||||
Sbjct: 98785 tctttcttgctgcttcttaa 98804

>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 235     aggatcaatcccgcctcctg 254
               ||||||||||||||||||||
Sbjct: 2873346 aggatcaatcccgcctcctg 2873327

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 358     tggtcggcggcggcgttttc 377
               ||||||||||||||||||||
Sbjct: 2313950 tggtcggcggcggcgttttc 2313969

>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17,
             complete sequence
          Length = 129498

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   gccaccgccgcacgccgccc 233
             ||||||||||||||||||||
Sbjct: 19895 gccaccgccgcacgccgccc 19914

>emb|AL663040.6| Mouse DNA sequence from clone RP23-61M22 on chromosome 11, complete
             sequence
          Length = 81885

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   ctctctttcttgctgcttct 339
             ||||||||||||||||||||
Sbjct: 54935 ctctctttcttgctgcttct 54916

>dbj|AB088119.1| Streptomyces sp. TP-A0274 staurosporine biosynthetic gene cluster
             (staR, staB, staA, staN, staG, staO, staD, staP, staMA,
             staJ, staK, staI, staE, staMB), complete cds
          Length = 22999

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   gtccaggggatggtcggcgg 367
             ||||||||||||||||||||
Sbjct: 21077 gtccaggggatggtcggcgg 21058

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 214      gccaccgccgcacgccgccc 233
                ||||||||||||||||||||
Sbjct: 24022916 gccaccgccgcacgccgccc 24022935



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    gccaccgccgcacgccgccc 233
              ||||||||||||||||||||
Sbjct: 396777 gccaccgccgcacgccgccc 396796

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 212     gagccaccgccgcacgccgc 231
               ||||||||||||||||||||
Sbjct: 8327460 gagccaccgccgcacgccgc 8327479

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 214      gccaccgccgcacgccgccc 233
                ||||||||||||||||||||
Sbjct: 17119257 gccaccgccgcacgccgccc 17119238

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 214      gccaccgccgcacgccgccc 233
                ||||||||||||||||||||
Sbjct: 28504946 gccaccgccgcacgccgccc 28504927

>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1148_D05
          Length = 155146

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 214    gccaccgccgcacgccgccc 233
              ||||||||||||||||||||
Sbjct: 129067 gccaccgccgcacgccgccc 129048

>dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0017H11
          Length = 158374

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   gccaccgccgcacgccgccc 233
             ||||||||||||||||||||
Sbjct: 73787 gccaccgccgcacgccgccc 73768

>dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0571D04
          Length = 149302

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   gccaccgccgcacgccgccc 233
             ||||||||||||||||||||
Sbjct: 72383 gccaccgccgcacgccgccc 72364

>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0682A06
          Length = 142023

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   gagccaccgccgcacgccgc 231
             ||||||||||||||||||||
Sbjct: 67569 gagccaccgccgcacgccgc 67588

>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    ctctctccgcccgcccccgc 288
              ||||||||||||||||||||
Sbjct: 156039 ctctctccgcccgcccccgc 156020



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 269    ctctctccgcccgcccccgc 288
              ||||||||||||||||||||
Sbjct: 127264 ctctctccgcccgcccccgc 127283

>emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004G23,
             complete sequence
          Length = 115972

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   gccaccgccgcacgccgccc 233
             ||||||||||||||||||||
Sbjct: 81436 gccaccgccgcacgccgccc 81455

>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13,
             complete sequence
          Length = 130249

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   gccaccgccgcacgccgccc 233
             ||||||||||||||||||||
Sbjct: 35529 gccaccgccgcacgccgccc 35548

>gb|AC101869.13| Mus musculus chromosome 1, clone RP23-348D4, complete sequence
          Length = 206095

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    ccccatcccggagcaccccg 194
              ||||||||||||||||||||
Sbjct: 177622 ccccatcccggagcaccccg 177641


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,410,982
Number of Sequences: 3902068
Number of extensions: 3410982
Number of successful extensions: 82838
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82171
Number of HSP's gapped (non-prelim): 667
length of query: 407
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 385
effective length of database: 17,147,199,772
effective search space: 6601671912220
effective search space used: 6601671912220
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)