ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl47b08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467966.1| Oryza sativa (japonica cultivar-group), mRNA 432 e-118
2ref|XM_506992.1| PREDICTED Oryza sativa (japonica cultivar-group... 432 e-118
3dbj|AK103640.1| Oryza sativa (japonica cultivar-group) cDNA clon... 432 e-118
4dbj|AK063351.1| Oryza sativa (japonica cultivar-group) cDNA clon... 432 e-118
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 234 2e-58
6dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic D... 234 2e-58
7dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic D... 234 2e-58
8dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 46 0.092
9emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86 44 0.36
10gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome 42 1.4
11ref|XM_482570.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
12gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.4
13ref|XM_957186.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.4
14ref|XM_328398.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.4
15ref|XM_546606.2| PREDICTED: Canis familiaris similar to period 1... 42 1.4
16gb|AY349011.1| Burkholderia cepacia phage Bcep22, complete genome 42 1.4
17ref|XM_500368.1| Yarrowia lipolytica CLIB122, YALI0B00990g predi... 42 1.4
18dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
19dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
20emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 42 1.4
21emb|AJ277735.1|SSC277735 Sus scrofa per1 gene for Period protein... 42 1.4
22gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 5.7
23gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, ... 40 5.7
24gb|DQ223042.1| Murine norovirus 3 polyprotein, capsid protein, a... 40 5.7
25gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence 40 5.7
26gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 5.7
27gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
28gb|AY813888.1| Schistosoma japonicum SJCHGC04485 protein mRNA, c... 40 5.7
29gb|AC114676.7| Mus musculus chromosome 5, clone RP24-211H1, comp... 40 5.7
30ref|XM_752675.1| Ustilago maydis 521 hypothetical protein (UM016... 40 5.7
31ref|XM_390035.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 5.7
32gb|AC132102.3| Mus musculus BAC clone RP24-360K9 from chromosome... 40 5.7
33gb|AY935268.1| Antirrhinum majus farinelli (FAR) gene, complete ... 40 5.7
34emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 40 5.7
35gb|AY834753.1| Cystobacter fuscus cystothiazole A gene cluster, ... 40 5.7
36gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 5.7
37dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
38dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
39dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
40gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold 40 5.7
41gb|AE009686.1| Brucella melitensis 16M chromosome II, section 48... 40 5.7
42dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
43gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 40 5.7
44dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
45dbj|AK100915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
46dbj|AK069189.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
47emb|CR974479.17| Pig DNA sequence from clone PigE-150P18 on chro... 40 5.7
48gb|U82397.1|RSU82397 Rhodobacter sphaeroides sigma-32 homolog (r... 40 5.7
49gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
50gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
51emb|AL731756.4|CNS08C85 Oryza sativa chromosome 12, . BAC OJ1220... 40 5.7
52emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II... 40 5.7 
>ref|XM_467966.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1675

 Score =  432 bits (218), Expect = e-118
 Identities = 290/314 (92%)
 Strand = Plus / Plus

                                                                       
Query: 108 tccccccacgacctcctcgccgagacccgcgcctccgtcgaggaggtcgccgcccgcata 167
           |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || 
Sbjct: 154 tccccccacgacctcctcgcggagacccgcgcctccgtggaggaggtcgccgcccggatc 213

                                                                       
Query: 168 ctcgccatcaagaaggacggcgcccccaagtccgagctccgcgagctcgtcgcgcagatg 227
           ||||||||||||||||||| ||||||||   |||||||||| ||||||||||| ||||||
Sbjct: 214 ctcgccatcaagaaggacgacgcccccagaaccgagctccgggagctcgtcgcccagatg 273

                                                                       
Query: 228 tccctcctcctcatcacgctccgccaggtgaacagggagatactgatggaggaggataag 287
           |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| | |
Sbjct: 274 tccctcctcctcatcacgcttcgccaggcgaacagggagatactgatggaggaggacagg 333

                                                                       
Query: 288 gtgaagggggagacggaggcggccaaggcgcccgtcgactccacgacgctgaggctgcac 347
           ||||||| ||||||||||||||| ||||||||||| |||||||||||||||  |||||||
Sbjct: 334 gtgaaggcggagacggaggcggcgaaggcgcccgtggactccacgacgctgcagctgcac 393

                                                                       
Query: 348 aacctgctgtacgagaagaaccactacgtgaaggccatcaggtcgtgcctcgacttccag 407
           ||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 394 aaccttctgtacgagaagaaccactacgtgaaggccattagggcgtgcctcgacttccag 453

                         
Query: 408 acgaagcacccggg 421
           || ||| |||||||
Sbjct: 454 accaagtacccggg 467



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 39  gcggcggaagccatggacgtcgaggcaccggcgcg 73
           ||||| ||||||||||| |||||||| ||||||||
Sbjct: 76  gcggccgaagccatggatgtcgaggcgccggcgcg 110
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>ref|XM_506992.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1004_A11.24
           mRNA
          Length = 1691

 Score =  432 bits (218), Expect = e-118
 Identities = 290/314 (92%)
 Strand = Plus / Plus

                                                                       
Query: 108 tccccccacgacctcctcgccgagacccgcgcctccgtcgaggaggtcgccgcccgcata 167
           |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || 
Sbjct: 160 tccccccacgacctcctcgcggagacccgcgcctccgtggaggaggtcgccgcccggatc 219

                                                                       
Query: 168 ctcgccatcaagaaggacggcgcccccaagtccgagctccgcgagctcgtcgcgcagatg 227
           ||||||||||||||||||| ||||||||   |||||||||| ||||||||||| ||||||
Sbjct: 220 ctcgccatcaagaaggacgacgcccccagaaccgagctccgggagctcgtcgcccagatg 279

                                                                       
Query: 228 tccctcctcctcatcacgctccgccaggtgaacagggagatactgatggaggaggataag 287
           |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| | |
Sbjct: 280 tccctcctcctcatcacgcttcgccaggcgaacagggagatactgatggaggaggacagg 339

                                                                       
Query: 288 gtgaagggggagacggaggcggccaaggcgcccgtcgactccacgacgctgaggctgcac 347
           ||||||| ||||||||||||||| ||||||||||| |||||||||||||||  |||||||
Sbjct: 340 gtgaaggcggagacggaggcggcgaaggcgcccgtggactccacgacgctgcagctgcac 399

                                                                       
Query: 348 aacctgctgtacgagaagaaccactacgtgaaggccatcaggtcgtgcctcgacttccag 407
           ||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 400 aaccttctgtacgagaagaaccactacgtgaaggccattagggcgtgcctcgacttccag 459

                         
Query: 408 acgaagcacccggg 421
           || ||| |||||||
Sbjct: 460 accaagtacccggg 473



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 39  gcggcggaagccatggacgtcgaggcaccggcgcg 73
           ||||| ||||||||||| |||||||| ||||||||
Sbjct: 82  gcggccgaagccatggatgtcgaggcgccggcgcg 116
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>dbj|AK103640.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134I01, full
           insert sequence
          Length = 1691

 Score =  432 bits (218), Expect = e-118
 Identities = 290/314 (92%)
 Strand = Plus / Plus

                                                                       
Query: 108 tccccccacgacctcctcgccgagacccgcgcctccgtcgaggaggtcgccgcccgcata 167
           |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || 
Sbjct: 160 tccccccacgacctcctcgcggagacccgcgcctccgtggaggaggtcgccgcccggatc 219

                                                                       
Query: 168 ctcgccatcaagaaggacggcgcccccaagtccgagctccgcgagctcgtcgcgcagatg 227
           ||||||||||||||||||| ||||||||   |||||||||| ||||||||||| ||||||
Sbjct: 220 ctcgccatcaagaaggacgacgcccccagaaccgagctccgggagctcgtcgcccagatg 279

                                                                       
Query: 228 tccctcctcctcatcacgctccgccaggtgaacagggagatactgatggaggaggataag 287
           |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| | |
Sbjct: 280 tccctcctcctcatcacgcttcgccaggcgaacagggagatactgatggaggaggacagg 339

                                                                       
Query: 288 gtgaagggggagacggaggcggccaaggcgcccgtcgactccacgacgctgaggctgcac 347
           ||||||| ||||||||||||||| ||||||||||| |||||||||||||||  |||||||
Sbjct: 340 gtgaaggcggagacggaggcggcgaaggcgcccgtggactccacgacgctgcagctgcac 399

                                                                       
Query: 348 aacctgctgtacgagaagaaccactacgtgaaggccatcaggtcgtgcctcgacttccag 407
           ||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 400 aaccttctgtacgagaagaaccactacgtgaaggccattagggcgtgcctcgacttccag 459

                         
Query: 408 acgaagcacccggg 421
           || ||| |||||||
Sbjct: 460 accaagtacccggg 473



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 39  gcggcggaagccatggacgtcgaggcaccggcgcg 73
           ||||| ||||||||||| |||||||| ||||||||
Sbjct: 82  gcggccgaagccatggatgtcgaggcgccggcgcg 116
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>dbj|AK063351.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-C01, full
           insert sequence
          Length = 1675

 Score =  432 bits (218), Expect = e-118
 Identities = 290/314 (92%)
 Strand = Plus / Plus

                                                                       
Query: 108 tccccccacgacctcctcgccgagacccgcgcctccgtcgaggaggtcgccgcccgcata 167
           |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || 
Sbjct: 154 tccccccacgacctcctcgcggagacccgcgcctccgtggaggaggtcgccgcccggatc 213

                                                                       
Query: 168 ctcgccatcaagaaggacggcgcccccaagtccgagctccgcgagctcgtcgcgcagatg 227
           ||||||||||||||||||| ||||||||   |||||||||| ||||||||||| ||||||
Sbjct: 214 ctcgccatcaagaaggacgacgcccccagaaccgagctccgggagctcgtcgcccagatg 273

                                                                       
Query: 228 tccctcctcctcatcacgctccgccaggtgaacagggagatactgatggaggaggataag 287
           |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| | |
Sbjct: 274 tccctcctcctcatcacgcttcgccaggcgaacagggagatactgatggaggaggacagg 333

                                                                       
Query: 288 gtgaagggggagacggaggcggccaaggcgcccgtcgactccacgacgctgaggctgcac 347
           ||||||| ||||||||||||||| ||||||||||| |||||||||||||||  |||||||
Sbjct: 334 gtgaaggcggagacggaggcggcgaaggcgcccgtggactccacgacgctgcagctgcac 393

                                                                       
Query: 348 aacctgctgtacgagaagaaccactacgtgaaggccatcaggtcgtgcctcgacttccag 407
           ||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 394 aaccttctgtacgagaagaaccactacgtgaaggccattagggcgtgcctcgacttccag 453

                         
Query: 408 acgaagcacccggg 421
           || ||| |||||||
Sbjct: 454 accaagtacccggg 467



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 39  gcggcggaagccatggacgtcgaggcaccggcgcg 73
           ||||| ||||||||||| |||||||| ||||||||
Sbjct: 76  gcggccgaagccatggatgtcgaggcgccggcgcg 110
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  234 bits (118), Expect = 2e-58
 Identities = 157/170 (92%)
 Strand = Plus / Plus

                                                                            
Query: 252      caggtgaacagggagatactgatggaggaggataaggtgaagggggagacggaggcggcc 311
                |||| ||||||||||||||||||||||||||| | |||||||| ||||||||||||||| 
Sbjct: 32314224 caggcgaacagggagatactgatggaggaggacagggtgaaggcggagacggaggcggcg 32314283

                                                                            
Query: 312      aaggcgcccgtcgactccacgacgctgaggctgcacaacctgctgtacgagaagaaccac 371
                ||||||||||| |||||||||||||||  |||||||||||| ||||||||||||||||||
Sbjct: 32314284 aaggcgcccgtggactccacgacgctgcagctgcacaaccttctgtacgagaagaaccac 32314343

                                                                  
Query: 372      tacgtgaaggccatcaggtcgtgcctcgacttccagacgaagcacccggg 421
                |||||||||||||| ||| ||||||||||||||||||| ||| |||||||
Sbjct: 32314344 tacgtgaaggccattagggcgtgcctcgacttccagaccaagtacccggg 32314393



 Score =  208 bits (105), Expect = 1e-50
 Identities = 138/149 (92%)
 Strand = Plus / Plus

                                                                            
Query: 108      tccccccacgacctcctcgccgagacccgcgcctccgtcgaggaggtcgccgcccgcata 167
                |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || 
Sbjct: 32313986 tccccccacgacctcctcgcggagacccgcgcctccgtggaggaggtcgccgcccggatc 32314045

                                                                            
Query: 168      ctcgccatcaagaaggacggcgcccccaagtccgagctccgcgagctcgtcgcgcagatg 227
                ||||||||||||||||||| ||||||||   |||||||||| ||||||||||| ||||||
Sbjct: 32314046 ctcgccatcaagaaggacgacgcccccagaaccgagctccgggagctcgtcgcccagatg 32314105

                                             
Query: 228      tccctcctcctcatcacgctccgccaggt 256
                |||||||||||||||||||| ||||||||
Sbjct: 32314106 tccctcctcctcatcacgcttcgccaggt 32314134



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 39       gcggcggaagccatggacgtcgaggcaccggcgcg 73
                ||||| ||||||||||| |||||||| ||||||||
Sbjct: 32313908 gcggccgaagccatggatgtcgaggcgccggcgcg 32313942
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>dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0539D10
          Length = 158691

 Score =  234 bits (118), Expect = 2e-58
 Identities = 157/170 (92%)
 Strand = Plus / Plus

                                                                          
Query: 252    caggtgaacagggagatactgatggaggaggataaggtgaagggggagacggaggcggcc 311
              |||| ||||||||||||||||||||||||||| | |||||||| ||||||||||||||| 
Sbjct: 158237 caggcgaacagggagatactgatggaggaggacagggtgaaggcggagacggaggcggcg 158296

                                                                          
Query: 312    aaggcgcccgtcgactccacgacgctgaggctgcacaacctgctgtacgagaagaaccac 371
              ||||||||||| |||||||||||||||  |||||||||||| ||||||||||||||||||
Sbjct: 158297 aaggcgcccgtggactccacgacgctgcagctgcacaaccttctgtacgagaagaaccac 158356

                                                                
Query: 372    tacgtgaaggccatcaggtcgtgcctcgacttccagacgaagcacccggg 421
              |||||||||||||| ||| ||||||||||||||||||| ||| |||||||
Sbjct: 158357 tacgtgaaggccattagggcgtgcctcgacttccagaccaagtacccggg 158406



 Score =  208 bits (105), Expect = 1e-50
 Identities = 138/149 (92%)
 Strand = Plus / Plus

                                                                          
Query: 108    tccccccacgacctcctcgccgagacccgcgcctccgtcgaggaggtcgccgcccgcata 167
              |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || 
Sbjct: 157999 tccccccacgacctcctcgcggagacccgcgcctccgtggaggaggtcgccgcccggatc 158058

                                                                          
Query: 168    ctcgccatcaagaaggacggcgcccccaagtccgagctccgcgagctcgtcgcgcagatg 227
              ||||||||||||||||||| ||||||||   |||||||||| ||||||||||| ||||||
Sbjct: 158059 ctcgccatcaagaaggacgacgcccccagaaccgagctccgggagctcgtcgcccagatg 158118

                                           
Query: 228    tccctcctcctcatcacgctccgccaggt 256
              |||||||||||||||||||| ||||||||
Sbjct: 158119 tccctcctcctcatcacgcttcgccaggt 158147



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 39     gcggcggaagccatggacgtcgaggcaccggcgcg 73
              ||||| ||||||||||| |||||||| ||||||||
Sbjct: 157921 gcggccgaagccatggatgtcgaggcgccggcgcg 157955
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>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1004_A11
          Length = 132352

 Score =  234 bits (118), Expect = 2e-58
 Identities = 157/170 (92%)
 Strand = Plus / Plus

                                                                         
Query: 252   caggtgaacagggagatactgatggaggaggataaggtgaagggggagacggaggcggcc 311
             |||| ||||||||||||||||||||||||||| | |||||||| ||||||||||||||| 
Sbjct: 90056 caggcgaacagggagatactgatggaggaggacagggtgaaggcggagacggaggcggcg 90115

                                                                         
Query: 312   aaggcgcccgtcgactccacgacgctgaggctgcacaacctgctgtacgagaagaaccac 371
             ||||||||||| |||||||||||||||  |||||||||||| ||||||||||||||||||
Sbjct: 90116 aaggcgcccgtggactccacgacgctgcagctgcacaaccttctgtacgagaagaaccac 90175

                                                               
Query: 372   tacgtgaaggccatcaggtcgtgcctcgacttccagacgaagcacccggg 421
             |||||||||||||| ||| ||||||||||||||||||| ||| |||||||
Sbjct: 90176 tacgtgaaggccattagggcgtgcctcgacttccagaccaagtacccggg 90225



 Score =  208 bits (105), Expect = 1e-50
 Identities = 138/149 (92%)
 Strand = Plus / Plus

                                                                         
Query: 108   tccccccacgacctcctcgccgagacccgcgcctccgtcgaggaggtcgccgcccgcata 167
             |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || 
Sbjct: 89818 tccccccacgacctcctcgcggagacccgcgcctccgtggaggaggtcgccgcccggatc 89877

                                                                         
Query: 168   ctcgccatcaagaaggacggcgcccccaagtccgagctccgcgagctcgtcgcgcagatg 227
             ||||||||||||||||||| ||||||||   |||||||||| ||||||||||| ||||||
Sbjct: 89878 ctcgccatcaagaaggacgacgcccccagaaccgagctccgggagctcgtcgcccagatg 89937

                                          
Query: 228   tccctcctcctcatcacgctccgccaggt 256
             |||||||||||||||||||| ||||||||
Sbjct: 89938 tccctcctcctcatcacgcttcgccaggt 89966



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 39    gcggcggaagccatggacgtcgaggcaccggcgcg 73
             ||||| ||||||||||| |||||||| ||||||||
Sbjct: 89740 gcggccgaagccatggatgtcgaggcgccggcgcg 89774
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 138     gcctccgtcgaggaggtcgccgc 160
               |||||||||||||||||||||||
Sbjct: 5954584 gcctccgtcgaggaggtcgccgc 5954562
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>emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86
          Length = 407339

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 287    ggtgaagggggagacggaggcg 308
              ||||||||||||||||||||||
Sbjct: 308907 ggtgaagggggagacggaggcg 308886



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    ggtgaagggggagacggagg 306
              ||||||||||||||||||||
Sbjct: 306306 ggtgaagggggagacggagg 306287
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>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 200    cgagctccgcgagctcgtcgc 220
              |||||||||||||||||||||
Sbjct: 145647 cgagctccgcgagctcgtcgc 145627



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 200    cgagctccgcgagctcgtcgc 220
              |||||||||||||||||||||
Sbjct: 128362 cgagctccgcgagctcgtcgc 128382
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>ref|XM_482570.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1110

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 202 agctccgcgagctcgtcgcgc 222
           |||||||||||||||||||||
Sbjct: 278 agctccgcgagctcgtcgcgc 298
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 111     ccccacgacctcctcgccgag 131
               |||||||||||||||||||||
Sbjct: 2414281 ccccacgacctcctcgccgag 2414301
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>ref|XM_957186.1| Neurospora crassa OR74A hypothetical protein (NCU07693.1) partial
            mRNA
          Length = 3411

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 43   cggaagccatggacgtcgagg 63
            |||||||||||||||||||||
Sbjct: 2699 cggaagccatggacgtcgagg 2679
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>ref|XM_328398.1| Neurospora crassa OR74A hypothetical protein (NCU07693.1) partial
            mRNA
          Length = 3411

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 43   cggaagccatggacgtcgagg 63
            |||||||||||||||||||||
Sbjct: 2699 cggaagccatggacgtcgagg 2679
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>ref|XM_546606.2| PREDICTED: Canis familiaris similar to period 1 (LOC489488), mRNA
          Length = 4266

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 25  tggcaaccgcggcggcggcggaagc 49
           |||| ||||||||||||||||||||
Sbjct: 270 tggcgaccgcggcggcggcggaagc 294
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>gb|AY349011.1| Burkholderia cepacia phage Bcep22, complete genome
          Length = 63882

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   agctccgcgagctcgtcgcgc 222
             |||||||||||||||||||||
Sbjct: 17065 agctccgcgagctcgtcgcgc 17085
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>ref|XM_500368.1| Yarrowia lipolytica CLIB122, YALI0B00990g predicted mRNA
          Length = 1926

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 354 ctgtacgagaagaaccactac 374
           |||||||||||||||||||||
Sbjct: 253 ctgtacgagaagaaccactac 273
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 202      agctccgcgagctcgtcgcgc 222
                |||||||||||||||||||||
Sbjct: 21148560 agctccgcgagctcgtcgcgc 21148580
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>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0413H11
          Length = 147655

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 202    agctccgcgagctcgtcgcgc 222
              |||||||||||||||||||||
Sbjct: 119770 agctccgcgagctcgtcgcgc 119790
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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 354    ctgtacgagaagaaccactac 374
              |||||||||||||||||||||
Sbjct: 166175 ctgtacgagaagaaccactac 166155
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>emb|AJ277735.1|SSC277735 Sus scrofa per1 gene for Period protein, exons 2-14
          Length = 5040

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 25   tggcaaccgcggcggcggcggaagc 49
            |||| ||||||||||||||||||||
Sbjct: 1016 tggcgaccgcggcggcggcggaagc 1040
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 75      ccgcccagcgccaccaccgc 94
               ||||||||||||||||||||
Sbjct: 3574759 ccgcccagcgccaccaccgc 3574778
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>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence
          Length = 491611

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     cgccaccaccgcgccaaagc 102
              ||||||||||||||||||||
Sbjct: 480625 cgccaccaccgcgccaaagc 480644
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>gb|DQ223042.1| Murine norovirus 3 polyprotein, capsid protein, and small basic
            protein genes, complete cds
          Length = 7383

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 230  cctcctcctcatcacgctcc 249
            ||||||||||||||||||||
Sbjct: 2802 cctcctcctcatcacgctcc 2783
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>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence
          Length = 1207381

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     accgcggcggcggcggaagc 49
              ||||||||||||||||||||
Sbjct: 771282 accgcggcggcggcggaagc 771301
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 31      ccgcggcggcggcggaagcc 50
               ||||||||||||||||||||
Sbjct: 1038986 ccgcggcggcggcggaagcc 1039005
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>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0042J05, complete sequence
          Length = 150295

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     ggcaaccgcggcggcggcgg 45
              ||||||||||||||||||||
Sbjct: 138795 ggcaaccgcggcggcggcgg 138776
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>gb|AY813888.1| Schistosoma japonicum SJCHGC04485 protein mRNA, complete cds
          Length = 469

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 gatgtccctcctcctcatca 243
           ||||||||||||||||||||
Sbjct: 172 gatgtccctcctcctcatca 153
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>gb|AC114676.7| Mus musculus chromosome 5, clone RP24-211H1, complete sequence
          Length = 153903

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    ccgcccagcgccaccaccgc 94
             ||||||||||||||||||||
Sbjct: 60603 ccgcccagcgccaccaccgc 60584
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>ref|XM_752675.1| Ustilago maydis 521 hypothetical protein (UM01621.1) partial mRNA
          Length = 1593

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  aggcgcccgtcgactccacg 332
            ||||||||||||||||||||
Sbjct: 1321 aggcgcccgtcgactccacg 1302
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>ref|XM_390035.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09859.1)
           partial mRNA
          Length = 1947

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 107 ctccccccacgacctcctcg 126
           ||||||||||||||||||||
Sbjct: 80  ctccccccacgacctcctcg 61
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>gb|AC132102.3| Mus musculus BAC clone RP24-360K9 from chromosome 5, complete sequence
          Length = 144545

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     ccgcccagcgccaccaccgc 94
              ||||||||||||||||||||
Sbjct: 134299 ccgcccagcgccaccaccgc 134280
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>gb|AY935268.1| Antirrhinum majus farinelli (FAR) gene, complete sequence
          Length = 54307

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 286   aggtgaagggggagacggaggcgg 309
             ||||||||| ||||||||||||||
Sbjct: 53001 aggtgaaggaggagacggaggcgg 52978
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>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    cgcccagcgccaccaccgcg 95
             ||||||||||||||||||||
Sbjct: 81715 cgcccagcgccaccaccgcg 81734
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>gb|AY834753.1| Cystobacter fuscus cystothiazole A gene cluster, complete sequence
          Length = 63876

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   tgcctcgacttccagacgaa 412
             ||||||||||||||||||||
Sbjct: 17952 tgcctcgacttccagacgaa 17971
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    tccgcgagctcgtcgcgcag 224
              ||||||||||||||||||||
Sbjct: 386470 tccgcgagctcgtcgcgcag 386489
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 31      ccgcggcggcggcggaagcc 50
               ||||||||||||||||||||
Sbjct: 7419847 ccgcggcggcggcggaagcc 7419828
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 26       ggcaaccgcggcggcggcgg 45
                ||||||||||||||||||||
Sbjct: 23122792 ggcaaccgcggcggcggcgg 23122773
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 26       ggcaaccgcggcggcggcgg 45
                ||||||||||||||||||||
Sbjct: 29461048 ggcaaccgcggcggcggcgg 29461067
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>gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold
          Length = 1570569

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 259     acagggagatactgatggaggagg 282
               ||||||||||||| ||||||||||
Sbjct: 1512149 acagggagatacttatggaggagg 1512126
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>gb|AE009686.1| Brucella melitensis 16M chromosome II, section 48 of 107 of the
            complete sequence
          Length = 10687

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 30   accgcggcggcggcggaagc 49
            ||||||||||||||||||||
Sbjct: 3464 accgcggcggcggcggaagc 3445
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>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0621D05
          Length = 180250

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     ggcaaccgcggcggcggcgg 45
              ||||||||||||||||||||
Sbjct: 171929 ggcaaccgcggcggcggcgg 171948
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>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence
          Length = 1162204

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     accgcggcggcggcggaagc 49
              ||||||||||||||||||||
Sbjct: 445886 accgcggcggcggcggaagc 445867
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>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0655A07
          Length = 172473

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    ggcaaccgcggcggcggcgg 45
             ||||||||||||||||||||
Sbjct: 25554 ggcaaccgcggcggcggcgg 25573
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>dbj|AK100915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133D21,
          full insert sequence
          Length = 773

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 26 ggcaaccgcggcggcggcgg 45
          ||||||||||||||||||||
Sbjct: 75 ggcaaccgcggcggcggcgg 94
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>dbj|AK069189.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004N19,
          full insert sequence
          Length = 1343

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 26 ggcaaccgcggcggcggcgg 45
          ||||||||||||||||||||
Sbjct: 41 ggcaaccgcggcggcggcgg 22
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>emb|CR974479.17| Pig DNA sequence from clone PigE-150P18 on chromosome 7, complete
             sequence
          Length = 152730

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   ggaggataaggtgaaggggg 297
             ||||||||||||||||||||
Sbjct: 53962 ggaggataaggtgaaggggg 53943
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>gb|U82397.1|RSU82397 Rhodobacter sphaeroides sigma-32 homolog (rpoH) gene, complete cds
          Length = 1386

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 31  ccgcggcggcggcggaagcc 50
           ||||||||||||||||||||
Sbjct: 103 ccgcggcggcggcggaagcc 122
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 26       ggcaaccgcggcggcggcgg 45
                ||||||||||||||||||||
Sbjct: 23432702 ggcaaccgcggcggcggcgg 23432683
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 31      ccgcggcggcggcggaagcc 50
               ||||||||||||||||||||
Sbjct: 7419726 ccgcggcggcggcggaagcc 7419707
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>emb|AL731756.4|CNS08C85 Oryza sativa chromosome 12, . BAC OJ1220_D01 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 98782

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   ccgcggcggcggcggaagcc 50
            ||||||||||||||||||||
Sbjct: 9523 ccgcggcggcggcggaagcc 9504
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>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence,
              strain 2308
          Length = 1156948

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     accgcggcggcggcggaagc 49
              ||||||||||||||||||||
Sbjct: 445899 accgcggcggcggcggaagc 445880


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,389,550
Number of Sequences: 3902068
Number of extensions: 3389550
Number of successful extensions: 102184
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100483
Number of HSP's gapped (non-prelim): 1701
length of query: 423
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 401
effective length of database: 17,147,199,772
effective search space: 6876027108572
effective search space used: 6876027108572
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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