>dbj|AK111889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072M05, full
           insert sequence
          Length = 3441

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 131/160 (81%)
 Strand = Plus / Plus

                                                                       
Query: 146 ggggatgacgatacctagtgccgagggattactctcgtctgcgagctgcctgccgtgcac 205
           ||||||||||||||| || |||||||| || |||    | ||||||||||| ||||||||
Sbjct: 154 ggggatgacgataccgagcgccgaggggttcctccacgccgcgagctgcctcccgtgcac 213

                                                                       
Query: 206 agcggaggaggaaagggcggccgtcgacgcactcacgcggcaggccgacgcgaatgtcaa 265
            |||||||||||  |||    ||||| ||| |||||  || ||||||| | |||||||||
Sbjct: 214 ggcggaggaggagcgggacctcgtcgtcgcgctcaccagggaggccgaggagaatgtcaa 273

                                                   
Query: 266 agacggcgatctccgctatctcatctcacaaagctggtgg 305
            ||||||||||||||||| ||| |||| || |||||||||
Sbjct: 274 ggacggcgatctccgctacctcgtctcccacagctggtgg 313

>dbj|AK101446.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039L17, full
           insert sequence
          Length = 1523

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 131/160 (81%)
 Strand = Plus / Plus

                                                                       
Query: 146 ggggatgacgatacctagtgccgagggattactctcgtctgcgagctgcctgccgtgcac 205
           ||||||||||||||| || |||||||| || |||    | ||||||||||| ||||||||
Sbjct: 131 ggggatgacgataccgagcgccgaggggttcctccacgccgcgagctgcctcccgtgcac 190

                                                                       
Query: 206 agcggaggaggaaagggcggccgtcgacgcactcacgcggcaggccgacgcgaatgtcaa 265
            |||||||||||  |||    ||||| ||| |||||  || ||||||| | |||||||||
Sbjct: 191 ggcggaggaggagcgggacctcgtcgtcgcgctcaccagggaggccgaggagaatgtcaa 250

                                                   
Query: 266 agacggcgatctccgctatctcatctcacaaagctggtgg 305
            ||||||||||||||||| ||| |||| || |||||||||
Sbjct: 251 ggacggcgatctccgctacctcgtctcccacagctggtgg 290

>ref|NM_194965.1| Oryza sativa (japonica cultivar-group) putative ubiquitin carboxyl
           terminal hydrolase (OSJNBa0050E08.11), mRNA
          Length = 2673

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 127/156 (81%)
 Strand = Plus / Plus

                                                                       
Query: 150 atgacgatacctagtgccgagggattactctcgtctgcgagctgcctgccgtgcacagcg 209
           ||||||||||| || |||||||| || |||    | ||||||||||| |||||||| |||
Sbjct: 1   atgacgataccgagcgccgaggggttcctccacgccgcgagctgcctcccgtgcacggcg 60

                                                                       
Query: 210 gaggaggaaagggcggccgtcgacgcactcacgcggcaggccgacgcgaatgtcaaagac 269
           ||||||||  |||    ||||| ||| |||||  || ||||||| | ||||||||| |||
Sbjct: 61  gaggaggagcgggacctcgtcgtcgcgctcaccagggaggccgaggagaatgtcaaggac 120

                                               
Query: 270 ggcgatctccgctatctcatctcacaaagctggtgg 305
           |||||||||||||| ||| |||| || |||||||||
Sbjct: 121 ggcgatctccgctacctcgtctcccacagctggtgg 156

>gb|AC098696.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050E08,
              complete sequence
          Length = 180499

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 120/147 (81%)
 Strand = Plus / Minus

                                                                          
Query: 146    ggggatgacgatacctagtgccgagggattactctcgtctgcgagctgcctgccgtgcac 205
              ||||||||||||||| || |||||||| || |||    | ||||||||||| ||||||||
Sbjct: 102054 ggggatgacgataccgagcgccgaggggttcctccacgccgcgagctgcctcccgtgcac 101995

                                                                          
Query: 206    agcggaggaggaaagggcggccgtcgacgcactcacgcggcaggccgacgcgaatgtcaa 265
               |||||||||||  |||    ||||| ||| |||||  || ||||||| | |||||||||
Sbjct: 101994 ggcggaggaggagcgggacctcgtcgtcgcgctcaccagggaggccgaggagaatgtcaa 101935

                                         
Query: 266    agacggcgatctccgctatctcatctc 292
               ||||||||||||||||| ||| ||||
Sbjct: 101934 ggacggcgatctccgctacctcgtctc 101908

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 120/147 (81%)
 Strand = Plus / Minus

                                                                           
Query: 146     ggggatgacgatacctagtgccgagggattactctcgtctgcgagctgcctgccgtgcac 205
               ||||||||||||||| || |||||||| || |||    | ||||||||||| ||||||||
Sbjct: 3820258 ggggatgacgataccgagcgccgaggggttcctccacgccgcgagctgcctcccgtgcac 3820199

                                                                           
Query: 206     agcggaggaggaaagggcggccgtcgacgcactcacgcggcaggccgacgcgaatgtcaa 265
                |||||||||||  |||    ||||| ||| |||||  || ||||||| | |||||||||
Sbjct: 3820198 ggcggaggaggagcgggacctcgtcgtcgcgctcaccagggaggccgaggagaatgtcaa 3820139

                                          
Query: 266     agacggcgatctccgctatctcatctc 292
                ||||||||||||||||| ||| ||||
Sbjct: 3820138 ggacggcgatctccgctacctcgtctc 3820112

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 120/147 (81%)
 Strand = Plus / Minus

                                                                           
Query: 146     ggggatgacgatacctagtgccgagggattactctcgtctgcgagctgcctgccgtgcac 205
               ||||||||||||||| || |||||||| || |||    | ||||||||||| ||||||||
Sbjct: 3820179 ggggatgacgataccgagcgccgaggggttcctccacgccgcgagctgcctcccgtgcac 3820120

                                                                           
Query: 206     agcggaggaggaaagggcggccgtcgacgcactcacgcggcaggccgacgcgaatgtcaa 265
                |||||||||||  |||    ||||| ||| |||||  || ||||||| | |||||||||
Sbjct: 3820119 ggcggaggaggagcgggacctcgtcgtcgcgctcaccagggaggccgaggagaatgtcaa 3820060

                                          
Query: 266     agacggcgatctccgctatctcatctc 292
                ||||||||||||||||| ||| ||||
Sbjct: 3820059 ggacggcgatctccgctacctcgtctc 3820033

>emb|BX883052.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
              assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
              RT1n haplotype; segment 11/11
          Length = 349381

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 68     ggtaccaaaccctaggtaggtag 90
              |||||||||||||||||||||||
Sbjct: 162917 ggtaccaaaccctaggtaggtag 162895

>gb|AC145900.3| Pan troglodytes BAC clone RP43-40I9 from 7, complete sequence
          Length = 160229

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 391    aagattgatacaggaagcttgtttt 415
              |||||||| ||||||||||||||||
Sbjct: 113546 aagattgagacaggaagcttgtttt 113522

>gb|AC004911.1| Homo sapiens PAC clone RP5-870F17 from 7, complete sequence
          Length = 155382

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 309   aactggcaatcatatgttggc 329
             |||||||||||||||||||||
Sbjct: 29606 aactggcaatcatatgttggc 29626

>gb|AC005046.3|AC005046 Homo sapiens BAC clone CTB-13F3 from 7q22, complete sequence
          Length = 219436

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 391    aagattgatacaggaagcttgtttt 415
              |||||||| ||||||||||||||||
Sbjct: 217452 aagattgagacaggaagcttgtttt 217428

>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     ctccgcagctccgcttcgcc 36
              ||||||||||||||||||||
Sbjct: 812517 ctccgcagctccgcttcgcc 812498

>gb|AC092436.5| Homo sapiens BAC clone RP11-302F12 from 4, complete sequence
          Length = 202133

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   gattggattggagggggatg 152
             ||||||||||||||||||||
Sbjct: 39292 gattggattggagggggatg 39311



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   gattggattggagggggatg 152
             ||||||||||||||||||||
Sbjct: 39269 gattggattggagggggatg 39288

>gb|AC007145.10| Drosophila melanogaster, chromosome 2L, region 37D, BAC clone
             BACR10I09, complete sequence
          Length = 169289

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    cgatccgattcgactcgatc 118
             ||||||||||||||||||||
Sbjct: 55708 cgatccgattcgactcgatc 55727

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 63      ctcgaggtaccaaaccctag 82
               ||||||||||||||||||||
Sbjct: 9030369 ctcgaggtaccaaaccctag 9030350

>dbj|AP003756.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1370_E02
          Length = 128326

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    ctcgaggtaccaaaccctag 82
             ||||||||||||||||||||
Sbjct: 20776 ctcgaggtaccaaaccctag 20757

>dbj|AP003755.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1354_H07
          Length = 157974

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    ctcgaggtaccaaaccctag 82
             ||||||||||||||||||||
Sbjct: 81812 ctcgaggtaccaaaccctag 81793

>emb|CR925719.8| Zebrafish DNA sequence from clone DKEYP-68F4 in linkage group 18,
             complete sequence
          Length = 126367

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 10    ccgttgcctccgcagctccgcttc 33
             |||||||||| |||||||||||||
Sbjct: 55197 ccgttgcctcagcagctccgcttc 55174

>emb|BX005312.20| Zebrafish DNA sequence from clone DKEY-79N12 in linkage group 18,
              complete sequence
          Length = 207484

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 10     ccgttgcctccgcagctccgcttc 33
              |||||||||| |||||||||||||
Sbjct: 173637 ccgttgcctcagcagctccgcttc 173660

>emb|AL732567.8| Zebrafish DNA sequence from clone CH211-263A23 in linkage group 6,
              complete sequence
          Length = 152840

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 333    ctcagttatggggagaatgacactgaca 360
              |||||||||||| ||||||| |||||||
Sbjct: 147909 ctcagttatgggcagaatgagactgaca 147936

>gb|AC007176.1|AC007176 Drosophila melanogaster, chromosome 2L, region 37C1-46B2, BAC clones
              DS04472 and BACR48O01, complete sequence
          Length = 160005

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     cgatccgattcgactcgatc 118
              ||||||||||||||||||||
Sbjct: 155640 cgatccgattcgactcgatc 155659

>gb|AE003662.3| Drosophila melanogaster chromosome 2L, section 71 of 83 of the complete
             sequence
          Length = 266205

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    cgatccgattcgactcgatc 118
             ||||||||||||||||||||
Sbjct: 50889 cgatccgattcgactcgatc 50908

>emb|BX276099.7| Zebrafish DNA sequence from clone CH211-204C21 in linkage group 5,
             complete sequence
          Length = 164049

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 308   caactggcaatcatatgttg 327
             ||||||||||||||||||||
Sbjct: 98646 caactggcaatcatatgttg 98627

>emb|AL683852.17| Mouse DNA sequence from clone RP23-72B15 on chromosome X, complete
             sequence
          Length = 200665

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   agggactaggagtggcagtg 437
             ||||||||||||||||||||
Sbjct: 13115 agggactaggagtggcagtg 13134

>emb|X76056.1|NSETSPR N. sylvestris DNA for spacer region between 25S and 18S ribosomal
           RNA genes
          Length = 4349

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 133 gattggattggagggggatgacga 156
           |||||||||||||||||| |||||
Sbjct: 507 gattggattggagggggaggacga 484


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,830,311
Number of Sequences: 3902068
Number of extensions: 2830311
Number of successful extensions: 47527
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47402
Number of HSP's gapped (non-prelim): 114
length of query: 444
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 422
effective length of database: 17,147,199,772
effective search space: 7236118303784
effective search space used: 7236118303784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)