ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl46h11 |
|---|---|
| Clone Library Name | barley_pub |
>TPP2_MOUSE (Q64514) Tripeptidyl-peptidase 2 (EC 3.4.14.10)| (Tripeptidyl-peptidase II) (TPP-II) (Tripeptidyl aminopeptidase) Length = 1261 Score = 108 bits (271), Expect = 5e-24 Identities = 53/88 (60%), Positives = 65/88 (73%) Frame = +1 Query: 187 EPSFLESLMPKKETGVDRFLAAHPEYDGRGSLIAIFDSGVDPAAAGLQKTSDGKPKILDV 366 EP L+PKKETG FL +PEYDGRG LIA+ D+GVDP A G+Q T+DGKPKI+D+ Sbjct: 7 EPFPFHGLLPKKETGASSFLCRYPEYDGRGVLIAVLDTGVDPGAPGMQVTTDGKPKIIDI 66 Query: 367 IDCTGSGDVDTSKVVKADADGVIVGASG 450 ID TGSGDV+T+ V+ DG I+G SG Sbjct: 67 IDTTGSGDVNTATEVE-PKDGEIIGLSG 93
>TPP2_HUMAN (P29144) Tripeptidyl-peptidase 2 (EC 3.4.14.10)| (Tripeptidyl-peptidase II) (TPP-II) (Tripeptidyl aminopeptidase) Length = 1248 Score = 108 bits (269), Expect = 8e-24 Identities = 54/88 (61%), Positives = 65/88 (73%) Frame = +1 Query: 187 EPSFLESLMPKKETGVDRFLAAHPEYDGRGSLIAIFDSGVDPAAAGLQKTSDGKPKILDV 366 EP L+PKKETG FL +PEYDGRG LIA+ D+GVDP A G+Q T+DGKPKI+D+ Sbjct: 7 EPFPFHGLLPKKETGAASFLCRYPEYDGRGVLIAVLDTGVDPGAPGMQVTTDGKPKIVDI 66 Query: 367 IDCTGSGDVDTSKVVKADADGVIVGASG 450 ID TGSGDV+T+ V+ DG IVG SG Sbjct: 67 IDTTGSGDVNTATEVE-PKDGEIVGLSG 93
>TPP2_RAT (Q64560) Tripeptidyl-peptidase 2 (EC 3.4.14.10)| (Tripeptidyl-peptidase II) (TPP-II) (Tripeptidyl aminopeptidase) Length = 1248 Score = 107 bits (268), Expect = 1e-23 Identities = 53/88 (60%), Positives = 64/88 (72%) Frame = +1 Query: 187 EPSFLESLMPKKETGVDRFLAAHPEYDGRGSLIAIFDSGVDPAAAGLQKTSDGKPKILDV 366 EP L+PKKETG FL +PEYDGRG LIA+ D+GVDP A G+Q T+DGKPKI+D+ Sbjct: 7 EPFPFHGLLPKKETGASSFLCRYPEYDGRGVLIAVLDTGVDPGAPGMQVTTDGKPKIIDI 66 Query: 367 IDCTGSGDVDTSKVVKADADGVIVGASG 450 ID TGSGDV+T+ V+ DG I G SG Sbjct: 67 IDTTGSGDVNTATEVE-PKDGEITGLSG 93
>TPP2_DROME (Q9V6K1) Tripeptidyl-peptidase 2 (EC 3.4.14.10)| (Tripeptidyl-peptidase II) (TPP-II) (Tripeptidyl aminopeptidase) (dTPP II) Length = 1441 Score = 90.5 bits (223), Expect = 2e-18 Identities = 47/83 (56%), Positives = 56/83 (67%), Gaps = 1/83 (1%) Frame = +1 Query: 205 SLMPKKETGVDRFLAAHPEYDGRGSLIAIFDSGVDPAAAGLQKTSDGKP-KILDVIDCTG 381 +L+PK ETGV FL +PEYDGR IAIFDSGVDP A GL+ DGK K+++ DC+G Sbjct: 101 ALVPKAETGVLNFLQKYPEYDGRDVTIAIFDSGVDPRATGLETLCDGKTVKVIERYDCSG 160 Query: 382 SGDVDTSKVVKADADGVIVGASG 450 GDVD K V D +G I G SG Sbjct: 161 CGDVDMKKKVTPDENGNIKGLSG 183
>YQS6_CAEEL (Q09541) Hypothetical subtilase-type proteinase F21H12.6 in| chromosome II (EC 3.4.21.-) Length = 1374 Score = 85.9 bits (211), Expect = 4e-17 Identities = 43/81 (53%), Positives = 57/81 (70%) Frame = +1 Query: 208 LMPKKETGVDRFLAAHPEYDGRGSLIAIFDSGVDPAAAGLQKTSDGKPKILDVIDCTGSG 387 L+ K +T + FL +P YDGR LIAI D+GVDP+ G+Q T+ G+ K+ DVIDC+G+G Sbjct: 64 LLNKTDTEQEIFLTKYPNYDGRDILIAILDTGVDPSLPGMQVTTTGERKMFDVIDCSGAG 123 Query: 388 DVDTSKVVKADADGVIVGASG 450 DVDTS + + DGVI G SG Sbjct: 124 DVDTS-ITRTVKDGVIEGISG 143
>PLS_PYRFU (P72186) Pyrolysin precursor (EC 3.4.21.-)| Length = 1398 Score = 47.4 bits (111), Expect = 2e-05 Identities = 24/59 (40%), Positives = 34/59 (57%) Frame = +1 Query: 262 YDGRGSLIAIFDSGVDPAAAGLQKTSDGKPKILDVIDCTGSGDVDTSKVVKADADGVIV 438 YDG G ++A+ D+GVDP L T DG+ KI++ D T G VDTS +G ++ Sbjct: 168 YDGSGVVVAVLDTGVDPNHPFLSITPDGRRKIIEWKDFTDEGFVDTSFSFSKVVNGTLI 226
>BORG5_MOUSE (Q91W92) Cdc42 effector protein 1 (Binder of Rho GTPases 5)| Length = 409 Score = 33.5 bits (75), Expect = 0.26 Identities = 27/76 (35%), Positives = 34/76 (44%) Frame = -2 Query: 452 APEAPTITPSASAFTTLDVSTSPLPVQSITSRILGFPSEVFCNPAAAGSTPESKMAMSEP 273 A APT P A A TTLD TS LP ++TS PA A ++ S+ Sbjct: 251 ANPAPTAKPPAHAITTLDAVTS-LPASAVTSL-----------PAPAAASSPSRGHFPNG 298 Query: 272 RPSYSGCAARKRSTPV 225 S G AA + +PV Sbjct: 299 VTSVLGPAAEAKPSPV 314
>RREB1_HUMAN (Q92766) RAS-responsive element-binding protein 1 (RREB-1)| (Raf-responsive zinc finger protein LZ321) Length = 755 Score = 30.8 bits (68), Expect = 1.7 Identities = 22/63 (34%), Positives = 28/63 (44%) Frame = -2 Query: 410 TTLDVSTSPLPVQSITSRILGFPSEVFCNPAAAGSTPESKMAMSEPRPSYSGCAARKRST 231 TT + SP P Q + P+EV + AG P K+A PS AA KRS+ Sbjct: 497 TTAEEGPSPAPEQE--EKPPETPAEVVESAPGAGEAPAEKLAEETEGPSDGESAAEKRSS 554 Query: 230 PVS 222 S Sbjct: 555 EKS 557
>GATD_METMA (Q8PUM7) Glutamyl-tRNA(Gln) amidotransferase subunit D (EC 6.3.5.-)| (Glu-ADT subunit D) Length = 425 Score = 30.4 bits (67), Expect = 2.2 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 10/57 (17%) Frame = +1 Query: 259 EYDGRGSLIAIFDSGVDPAAAGLQKTSDGKPKILD----------VIDCTGSGDVDT 399 EY GRG F G++P A ++ T P +LD V++ TG G V T Sbjct: 280 EYTGRGEKSLKFKPGMEPKCAIVKFTPGADPSVLDCYVDGGYKGLVLEGTGLGHVST 336
>CUTL1_HUMAN (P39880) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) Length = 1505 Score = 30.4 bits (67), Expect = 2.2 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Frame = -2 Query: 386 PLPVQSITSRILGFPSEVFCNPAAA-GSTPESKMAMSEPRPSYSGCAARKRSTPVSFFGI 210 P P + + P + + AAA G P + + P S S A R+ S+ S FG+ Sbjct: 1403 PSPASATATAAPAAPEDAATSAAAAPGEGPAAPSSAPPPSNSSSSSAPRRPSSLQSLFGL 1462 Query: 209 RDSRKEGSVRRNPL 168 ++ R NPL Sbjct: 1463 PEAAGARDSRDNPL 1476
>P3P_LACLC (P15292) PIII-type proteinase precursor (EC 3.4.21.96) (Lactocepin)| (Cell wall-associated serine proteinase) Length = 1902 Score = 30.0 bits (66), Expect = 2.8 Identities = 10/33 (30%), Positives = 21/33 (63%) Frame = +1 Query: 259 EYDGRGSLIAIFDSGVDPAAAGLQKTSDGKPKI 357 +Y G G+++++ DSG+DP ++ + D K+ Sbjct: 205 KYKGEGTVVSVIDSGIDPTHKDMRLSDDKDVKL 237
>P2P_LACLC (P15293) PII-type proteinase precursor (EC 3.4.21.96) (Lactocepin)| (Cell wall-associated serine proteinase) (LP151) Length = 1902 Score = 30.0 bits (66), Expect = 2.8 Identities = 10/33 (30%), Positives = 21/33 (63%) Frame = +1 Query: 259 EYDGRGSLIAIFDSGVDPAAAGLQKTSDGKPKI 357 +Y G G+++++ DSG+DP ++ + D K+ Sbjct: 205 KYKGEGTVVSVIDSGIDPTHKDMRLSDDKDVKL 237
>P1P_LACLC (P16271) PI-type proteinase precursor (EC 3.4.21.-)| (Wall-associated serine proteinase) Length = 1902 Score = 30.0 bits (66), Expect = 2.8 Identities = 10/33 (30%), Positives = 21/33 (63%) Frame = +1 Query: 259 EYDGRGSLIAIFDSGVDPAAAGLQKTSDGKPKI 357 +Y G G+++++ DSG+DP ++ + D K+ Sbjct: 205 KYKGEGTVVSVIDSGIDPTHKDMRLSDDKDVKL 237
>HISX_RHOBA (Q7UX39) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 460 Score = 30.0 bits (66), Expect = 2.8 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = -2 Query: 419 SAFTTLDVSTSPLPVQSITSRILGFPSEVFCNPAAAGSTPESKMAMSEP 273 SA DV+ +P P S+T R + P C P A + P + M + P Sbjct: 131 SAILHRDVTITPRPGVSLTQRYVPIPRVGICVPGGAAAYPSTVMMTAIP 179
>Y1401_HALSA (Q9HPZ6) UPF0179 protein Vng1401c| Length = 148 Score = 30.0 bits (66), Expect = 2.8 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = -2 Query: 344 PSEVFCNPAAAGSTPESKMAMSEPRPSYSGCAARKRSTPVSF 219 PS FC PA A E ++A + P + CA + T V F Sbjct: 102 PSHEFCEPAGASFDTEYQIAEIDGEPPHDHCALDRDLTLVEF 143
>BAZ2A_MOUSE (Q91YE5) Bromodomain adjacent to zinc finger domain 2A| (Transcription termination factor I-interacting protein 5) (TTF-I-interacting protein 5) (Tip5) Length = 1850 Score = 29.6 bits (65), Expect = 3.7 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 2/88 (2%) Frame = -2 Query: 443 APTITPSASAFTTLDVSTSPLPVQSITSRILGFPSEVF--CNPAAAGSTPESKMAMSEPR 270 +PT +P+AS + ++S + PV S P EVF +PA++ + P + S Sbjct: 387 SPTASPAASLTASAEISPAVSPVASSP-----VPPEVFVAVSPASSPALPAISLEASMTT 441 Query: 269 PSYSGCAARKRSTPVSFFGIRDSRKEGS 186 P S + + S +F + +RK S Sbjct: 442 PVTSPQGSPEPSPAAAFQTVSPARKNVS 469
>CABIN_HUMAN (Q9Y6J0) Calcineurin-binding protein Cabin 1 (Calcineurin inhibitor)| (CAIN) Length = 2220 Score = 29.6 bits (65), Expect = 3.7 Identities = 18/61 (29%), Positives = 25/61 (40%) Frame = -2 Query: 449 PEAPTITPSASAFTTLDVSTSPLPVQSITSRILGFPSEVFCNPAAAGSTPESKMAMSEPR 270 P AP P+ S D T P P + + I + C P+A+ ST + PR Sbjct: 1945 PTAPDPVPADSVQRPSDAHTKPRPALAAATTI------ITCPPSASASTLDQSKDPGPPR 1998 Query: 269 P 267 P Sbjct: 1999 P 1999
>P2P_LACPA (Q02470) PII-type proteinase precursor (EC 3.4.21.96) (Lactocepin)| (Cell wall-associated serine proteinase) (LP151) Length = 1902 Score = 29.3 bits (64), Expect = 4.8 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 5/55 (9%) Frame = +1 Query: 259 EYDGRGSLIAIFDSGVDPAAAGLQKTSDGKPKI--LDV---IDCTGSGDVDTSKV 408 +Y G G+++++ D+G+DP ++ + D K+ DV D G TSKV Sbjct: 205 KYKGEGTVVSVIDTGIDPTHKDMRLSDDKDVKLTKYDVEKFTDTAKHGRYFTSKV 259
>TRPA_LEPIN (Q8F150) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 264 Score = 29.3 bits (64), Expect = 4.8 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = +1 Query: 316 AAGLQKTSDGKPKILDVIDCTGSG--DVDTSKVVKADADGVIVGAS 447 A+GL+ KI+ + C G G D SKV+ ADGVI+G++ Sbjct: 188 ASGLEDRIRMVRKIVGLPVCAGFGISTSDQSKVISTYADGVIIGSA 233
>TRPA_LEPIC (Q72U04) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 264 Score = 29.3 bits (64), Expect = 4.8 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = +1 Query: 316 AAGLQKTSDGKPKILDVIDCTGSG--DVDTSKVVKADADGVIVGAS 447 A+GL+ KI+ + C G G D SKV+ ADGVI+G++ Sbjct: 188 ASGLEDRIRMVRKIVGLPVCAGFGISTSDQSKVISTYADGVIIGSA 233
>TECT_DROME (Q9VMH0) Tectonic precursor (dTectonic)| Length = 657 Score = 29.3 bits (64), Expect = 4.8 Identities = 17/55 (30%), Positives = 26/55 (47%) Frame = -2 Query: 446 EAPTITPSASAFTTLDVSTSPLPVQSITSRILGFPSEVFCNPAAAGSTPESKMAM 282 EAP T + S+ T +ST P + T+ + FP V P A ++P A+ Sbjct: 41 EAPATTGAPSSETVSSISTLPEAEVTTTTPAITFPPRVQQKPKVAVASPTMSTAL 95
>TRPG_PENCH (P24773) Anthranilate synthase component 2 (EC 4.1.3.27)| (Anthranilate synthase component II) [Includes: Glutamine amidotransferase; Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS); N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3 Length = 752 Score = 29.3 bits (64), Expect = 4.8 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -1 Query: 324 PSCSRINSRIEDGDERAAAVVLGVRGEE 241 P C + SR+E GD +++GVR +E Sbjct: 161 PDCLEVTSRVELGDASGKNIIMGVRHKE 188
>CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14)| Length = 860 Score = 29.3 bits (64), Expect = 4.8 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = -2 Query: 407 TLDVSTSPLPVQSITSRILGFPSEVFCNPAAAGSTPESKMAMSEPRPSYSGCAARKRSTP 228 ++ VST +SIT+R G PSE F + T +++ P +G + S P Sbjct: 591 SMTVSTRSPSTESITTRSQGSPSETFSTKSVPVDTISTELPSQTPTTIITGTPSDPVSAP 650 Query: 227 VS 222 + Sbjct: 651 TT 652
>PEPF_ASPNG (P52718) Serine-type carboxypeptidase F precursor (EC 3.4.16.-)| (Proteinase F) (CPD-II) Length = 531 Score = 28.9 bits (63), Expect = 6.3 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = -2 Query: 356 ILGFPSEVFCNPAAAG---STPESKMAMSEPRPSYSGCAARKRSTPVSFFGIRDSRKEGS 186 +LGFP+EV PA A + K AM P ++S C+ V G +EG Sbjct: 347 VLGFPTEVDYLPAGASIYFDRADVKRAMHAPNITWSECSVES----VFVGGDGGPEQEGD 402 Query: 185 VRRNPL 168 NP+ Sbjct: 403 YSANPI 408
>POLG_EC23C (Q9YID8) Genome polyprotein [Contains: Coat protein VP0 (P1AB); Coat| protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome-linked protein VPg (P3 Length = 2188 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = -1 Query: 393 NITTTRAINNIKDLGLPVRSFLQPSCSRINSRIEDGDERAAAVVL 259 NI TT ++ + + + S L PSC + + DGD + A V+ Sbjct: 979 NILTTACLSTLLIMDVTSSSVLSPSCKALMQCLMDGDVKKLAEVV 1023
>POLG_EC23W (O73556) Genome polyprotein [Contains: Coat protein VP0 (P1AB); Coat| protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome-linked protein VPg (P3 Length = 2179 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = -1 Query: 393 NITTTRAINNIKDLGLPVRSFLQPSCSRINSRIEDGDERAAAVVL 259 NI TT ++ + + + S L PSC + + DGD + A V+ Sbjct: 970 NILTTACLSTLLVMDVTSSSVLSPSCKALMQCLMDGDVKKLAEVV 1014 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.134 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,875,734 Number of Sequences: 219361 Number of extensions: 624004 Number of successful extensions: 2257 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 2168 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2247 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
