>MEGF8_MOUSE (P60882) Multiple epidermal growth factor-like domains 8 (EGF-like|
           domain-containing protein 4) (Multiple EGF-like domain
           protein 4)
          Length = 2330

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 16/30 (53%), Positives = 17/30 (56%)
 Frame = -2

Query: 233 LLTRSGSPALPRRAWAGTRPPIGGAAREEP 144
           LLT   S AL  R + G  PP GGAAR  P
Sbjct: 809 LLTNVSSVALGSRRFGGLLPPGGGAARAGP 838

>SUZ12_DROME (Q9NJG9) Polycomb protein Su(z)12 (Suppressor 12 of zeste protein)|
          Length = 900

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +1

Query: 139 GAGSSRAAPPIGGRVPAHARRGSA 210
           G+GSS   PP   R+PAH +RGSA
Sbjct: 709 GSGSSSMQPP--KRMPAHLKRGSA 730

>MEGF8_HUMAN (Q7Z7M0) Multiple epidermal growth factor-like domains 8 (EGF-like|
           domain-containing protein 4) (Multiple EGF-like domain
           protein 4)
          Length = 2386

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 16/30 (53%), Positives = 16/30 (53%)
 Frame = -2

Query: 233 LLTRSGSPALPRRAWAGTRPPIGGAAREEP 144
           LLT   S AL  R   G  PP GGAAR  P
Sbjct: 809 LLTNVSSVALGSRRVGGLLPPGGGAARAGP 838

>SNIP_HUMAN (Q9C0H9) p130Cas-associated protein (p140Cap) (SNAP-25-interacting|
           protein) (SNIP)
          Length = 1055

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +1

Query: 136 GGAGSSRAAPPIGGRVPAHARRGSAGDPERVSR 234
           G  G S  A P+ G  P  A    AG P  VSR
Sbjct: 487 GSGGRSSGATPVSGPPPPSASSTPAGQPTAVSR 519

>XKR6_HUMAN (Q5GH73) XK-related protein 6|
          Length = 641

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -2

Query: 203 PRRAWAGTRPPIGGAAREEPAPP 135
           P    AG +PP   AAR EP PP
Sbjct: 98  PAAPGAGRQPPTPSAARPEPPPP 120

>HNRPK_RAT (P61980) Heterogeneous nuclear ribonucleoprotein K (dC|
           stretch-binding protein) (CSBP)
          Length = 463

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 8/35 (22%)
 Frame = +1

Query: 136 GGAGSSRAA--------PPIGGRVPAHARRGSAGD 216
           GG G SRA         PP GG + A+ RRG  GD
Sbjct: 297 GGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGD 331

>HNRPK_RABIT (O19049) Heterogeneous nuclear ribonucleoprotein K (hnRNP K)|
          Length = 463

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 8/35 (22%)
 Frame = +1

Query: 136 GGAGSSRAA--------PPIGGRVPAHARRGSAGD 216
           GG G SRA         PP GG + A+ RRG  GD
Sbjct: 297 GGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGD 331

>HNRPK_MOUSE (P61979) Heterogeneous nuclear ribonucleoprotein K|
          Length = 463

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 8/35 (22%)
 Frame = +1

Query: 136 GGAGSSRAA--------PPIGGRVPAHARRGSAGD 216
           GG G SRA         PP GG + A+ RRG  GD
Sbjct: 297 GGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGD 331

>HNRPK_HUMAN (P61978) Heterogeneous nuclear ribonucleoprotein K (hnRNP K)|
           (Transformation up-regulated nuclear protein) (TUNP)
          Length = 463

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 8/35 (22%)
 Frame = +1

Query: 136 GGAGSSRAA--------PPIGGRVPAHARRGSAGD 216
           GG G SRA         PP GG + A+ RRG  GD
Sbjct: 297 GGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGD 331

>TRPC2_MOUSE (Q9R244) Short transient receptor potential channel 2 (TrpC2) (mTrp2)|
          Length = 1172

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +1

Query: 163  PPIGGRVPAHARRGSAGDPERVS 231
            PPIG      AR GSAG+ ERVS
Sbjct: 992  PPIGTFTNPGARAGSAGEGERVS 1014


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.310    0.132    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,467,967
Number of Sequences: 219361
Number of extensions: 188257
Number of successful extensions: 800
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 80,573,946
effective HSP length: 53
effective length of database: 68,947,813
effective search space used: 1654747512
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)