ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl46h04 |
|---|---|
| Clone Library Name | barley_pub |
>ODO1_CAEEL (O61199) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1029 Score = 42.7 bits (99), Expect = 2e-04 Identities = 16/31 (51%), Positives = 24/31 (77%) Frame = +2 Query: 305 DSFLDGTSSVYLEELQRAWEADPTSVDESWD 397 + FL+G+SS+Y+E++ AW DP+SV SWD Sbjct: 49 EPFLNGSSSIYIEQMYEAWLQDPSSVHTSWD 79
>ODO1_YEAST (P20967) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1014 Score = 42.0 bits (97), Expect = 4e-04 Identities = 15/32 (46%), Positives = 25/32 (78%) Frame = +2 Query: 302 TDSFLDGTSSVYLEELQRAWEADPTSVDESWD 397 TD+FL +++ Y++E+ +AW+ DP+SV SWD Sbjct: 41 TDNFLSTSNATYIDEMYQAWQKDPSSVHVSWD 72
>ODO1_CAEBR (Q623T0) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1027 Score = 40.0 bits (92), Expect = 0.001 Identities = 17/40 (42%), Positives = 27/40 (67%) Frame = +2 Query: 278 RAVPLSRLTDSFLDGTSSVYLEELQRAWEADPTSVDESWD 397 ++V S + FL+G+SSVY+E++ W +P+SV SWD Sbjct: 41 QSVAASVKHEPFLNGSSSVYIEQMYETWLENPSSVHTSWD 80
>ODO1_PONPY (Q5RCB8) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1023 Score = 39.3 bits (90), Expect = 0.002 Identities = 17/31 (54%), Positives = 22/31 (70%) Frame = +2 Query: 305 DSFLDGTSSVYLEELQRAWEADPTSVDESWD 397 + FL GTSS Y+EE+ AW +P SV +SWD Sbjct: 47 EPFLSGTSSNYVEEMYCAWLENPKSVHKSWD 77
>ODO1_MACFA (Q60HE2) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1023 Score = 39.3 bits (90), Expect = 0.002 Identities = 17/31 (54%), Positives = 22/31 (70%) Frame = +2 Query: 305 DSFLDGTSSVYLEELQRAWEADPTSVDESWD 397 + FL GTSS Y+EE+ AW +P SV +SWD Sbjct: 47 EPFLSGTSSNYVEEMYCAWLENPKSVHKSWD 77
>ODO1_MOUSE (Q60597) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1019 Score = 39.3 bits (90), Expect = 0.002 Identities = 17/31 (54%), Positives = 22/31 (70%) Frame = +2 Query: 305 DSFLDGTSSVYLEELQRAWEADPTSVDESWD 397 + FL GTSS Y+EE+ AW +P SV +SWD Sbjct: 47 EPFLSGTSSNYVEEMYCAWLENPKSVHKSWD 77
>ODO1_HUMAN (Q02218) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1002 Score = 39.3 bits (90), Expect = 0.002 Identities = 17/31 (54%), Positives = 22/31 (70%) Frame = +2 Query: 305 DSFLDGTSSVYLEELQRAWEADPTSVDESWD 397 + FL GTSS Y+EE+ AW +P SV +SWD Sbjct: 47 EPFLSGTSSNYVEEMYCAWLENPKSVHKSWD 77
>ODO1_BRUSU (Q8FYF7) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 1004 Score = 34.7 bits (78), Expect = 0.056 Identities = 21/49 (42%), Positives = 30/49 (61%) Frame = +2 Query: 248 LPRRYAAPEPRAVPLSRLTDSFLDGTSSVYLEELQRAWEADPTSVDESW 394 + ++ AP+ RA + LT SFL G ++ Y+EEL +E DP SVD W Sbjct: 1 MAKQEQAPD-RANDVFALT-SFLYGGNADYIEELYAKYEDDPNSVDPQW 47
>ODO1_BRUME (Q8YJE4) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 1004 Score = 34.7 bits (78), Expect = 0.056 Identities = 21/49 (42%), Positives = 30/49 (61%) Frame = +2 Query: 248 LPRRYAAPEPRAVPLSRLTDSFLDGTSSVYLEELQRAWEADPTSVDESW 394 + ++ AP+ RA + LT SFL G ++ Y+EEL +E DP SVD W Sbjct: 1 MAKQEQAPD-RANDVFALT-SFLYGGNADYIEELYAKYEDDPNSVDPQW 47
>ODO1_HAEIN (P45303) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 935 Score = 33.9 bits (76), Expect = 0.096 Identities = 14/32 (43%), Positives = 21/32 (65%) Frame = +2 Query: 299 LTDSFLDGTSSVYLEELQRAWEADPTSVDESW 394 L + L G + Y+EEL ++ +DP SV+ESW Sbjct: 11 LASTALGGANQSYIEELYESYLSDPQSVEESW 42
>COBS_RHILO (Q98KP0) Cobalamin synthase (EC 2.-.-.-)| Length = 259 Score = 32.7 bits (73), Expect = 0.21 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +3 Query: 18 LAAASWVEPAPGILPPKIGTISLFSAARFGVGRG 119 LAAA W P G+L IG I +A RFG+ G Sbjct: 39 LAAAIWAAPVAGLLVGLIGAIVFATAERFGLAMG 72
>ODO1_RICCN (Q92J42) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 928 Score = 32.0 bits (71), Expect = 0.36 Identities = 12/28 (42%), Positives = 22/28 (78%) Frame = +2 Query: 311 FLDGTSSVYLEELQRAWEADPTSVDESW 394 +L G ++V++EEL + + A+P SVD++W Sbjct: 10 YLFGGNAVFVEELYKQYLANPASVDQTW 37
>TRI1_STRCO (Q9RDE2) Tricorn protease homolog 1 (EC 3.4.21.-)| Length = 1067 Score = 32.0 bits (71), Expect = 0.36 Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 3/40 (7%) Frame = -1 Query: 285 TARGSGAAYRRGSVEWKYRGAGPANGLA---GARDRLLRS 175 TARGS A R G V W +GPA LA G R+RL R+ Sbjct: 300 TARGSAVAVR-GGVHWVTHRSGPARALAATPGVRNRLPRT 338
>ENL_HUMAN (Q03111) Protein ENL| Length = 559 Score = 31.6 bits (70), Expect = 0.48 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -2 Query: 182 SAAPPGLNPTRPGTAPFSDRIPSPDAKSSRGKK 84 S + PG +P ++ FSD+ P+ D S+RG+K Sbjct: 308 SRSAPGTSPRTSSSSSFSDKKPAKDKSSTRGEK 340
>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2| Length = 1009 Score = 30.8 bits (68), Expect = 0.81 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -2 Query: 158 PTRPGTAPFSDRIPSPDAKSSRGKKRNRPD 69 P G PF+ R P PDA ++ G++ RP+ Sbjct: 225 PAPQGDRPFNQRAPRPDANANFGQRAPRPE 254
>Y737_DROME (P83475) Hypothetical protein CG31737 in chromosome 2| Length = 263 Score = 30.8 bits (68), Expect = 0.81 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 212 FAGPAPRYFHSTLPRRYAAPEPRAVP 289 + GP PR + PRRY+ P PR P Sbjct: 194 YPGPGPRGYPGQGPRRYSCPGPRGYP 219 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = +2 Query: 212 FAGPAPRYFHSTLPRRYAAPEPRAVP 289 + GP PR + PR Y P PR P Sbjct: 178 YPGPGPRGYPGRGPRGYPGPGPRGYP 203
>ODO1_RICPR (Q9ZDY3) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 936 Score = 30.8 bits (68), Expect = 0.81 Identities = 12/28 (42%), Positives = 21/28 (75%) Frame = +2 Query: 311 FLDGTSSVYLEELQRAWEADPTSVDESW 394 +L ++V++EEL R + A+P SVD++W Sbjct: 10 YLFSGNAVFVEELYRQYLANPNSVDQTW 37
>RHG09_HUMAN (Q9BRR9) Rho-GTPase-activating protein 9| Length = 750 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = -1 Query: 315 RKLSVRRESGTARGSGAAYRRGSVEWKYRGAGPANGLAGARDRLLRSATRAKP 157 R + RRE+ T R G+ R +E + G+GPA L+ D S +KP Sbjct: 439 RWVEARREAPTGRDQGSGDRENPLELRLSGSGPAE-LSAGEDEEEESELVSKP 490
>TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-derived tau| kinase) Length = 1321 Score = 30.4 bits (67), Expect = 1.1 Identities = 28/71 (39%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Frame = -1 Query: 309 LSVRRESGTARGSGAAYRRGSVEWKYRGAGPANGLAGARDRLLRS-ATRAKPDAARN-SP 136 ++ R + T GS A + RG GP AGAR RS A AARN S Sbjct: 1188 ITSRLQLQTPPGSATAADLRPKQPPGRGLGPGRAQAGARPPAPRSPRLPASTSAARNASA 1247 Query: 135 IFRSNSLSRRQ 103 RS SLSRR+ Sbjct: 1248 SPRSQSLSRRE 1258
>ODO1_RALEU (Q59106) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 950 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/31 (38%), Positives = 22/31 (70%) Frame = +2 Query: 302 TDSFLDGTSSVYLEELQRAWEADPTSVDESW 394 ++S+L G ++ Y+EEL A+ +P SV ++W Sbjct: 7 SNSYLFGGNAPYVEELYEAYLQNPASVPDNW 37
>ODO1_ECOLI (P0AFG3) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 933 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +2 Query: 299 LTDSFLDGTSSVYLEELQRAWEADPTSVDESW 394 L S+L G + ++E+L + DP SVD +W Sbjct: 10 LDSSYLSGANQSWIEQLYEDFLTDPDSVDANW 41
>ODO1_ECOL6 (P0AFG4) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 933 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +2 Query: 299 LTDSFLDGTSSVYLEELQRAWEADPTSVDESW 394 L S+L G + ++E+L + DP SVD +W Sbjct: 10 LDSSYLSGANQSWIEQLYEDFLTDPDSVDANW 41
>ODO1_ECO57 (P0AFG5) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 933 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +2 Query: 299 LTDSFLDGTSSVYLEELQRAWEADPTSVDESW 394 L S+L G + ++E+L + DP SVD +W Sbjct: 10 LDSSYLSGANQSWIEQLYEDFLTDPDSVDANW 41
>ODO1_BUCBP (Q89AJ7) Oxoglutarate dehydrogenase (EC 1.2.4.2)| Length = 916 Score = 29.6 bits (65), Expect = 1.8 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = +2 Query: 293 SRLTDSFLDGTSSVYLEELQRAWEADPTSVDESW 394 + S++ +S Y++ L + DPTS+D SW Sbjct: 4 NEFNSSWMSSFNSSYIDNLYNKFLLDPTSIDNSW 37
>CHEB1_CAUCR (O87717) Chemotaxis response regulator protein-glutamate| methylesterase of group 1 operon (EC 3.1.1.61) Length = 344 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%) Frame = +1 Query: 85 FFPRLDLASGEGIR-SENGAV--PGRVGFSPGGAAEEPVARS 201 F RLD +SG ++ + +GA+ PG+V +PGGA V RS Sbjct: 198 FAARLDRSSGAKVQEASDGALLEPGKVYVAPGGATHLEVVRS 239
>CUTL1_HUMAN (P39880) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) Length = 1505 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/44 (38%), Positives = 20/44 (45%) Frame = -2 Query: 203 PERATGSSAAPPGLNPTRPGTAPFSDRIPSPDAKSSRGKKRNRP 72 PE A S+AA PG P P +AP P + SS RP Sbjct: 1417 PEDAATSAAAAPGEGPAAPSSAP-------PPSNSSSSSAPRRP 1453
>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional| activator IE175) (Alpha-4 protein) Length = 1298 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/36 (50%), Positives = 19/36 (52%), Gaps = 5/36 (13%) Frame = -2 Query: 197 RATG---SSAAP--PGLNPTRPGTAPFSDRIPSPDA 105 RA G SSAAP PG P PG P S+ P P A Sbjct: 218 RAVGRGPSSAAPAAPGRTPPPPGPPPLSEAAPKPRA 253
>TGM1_HUMAN (P22735) Protein-glutamine gamma-glutamyltransferase K (EC| 2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K)) (Transglutaminase-1) (Epidermal TGase) Length = 817 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -2 Query: 167 GLNPTRPGTAPFSDRIPSPDAKSSRGKKRN 78 G NP +P T P + P PD +S RG R+ Sbjct: 13 GGNPLQPPTTPSPEPEPEPDGRSRRGGGRS 42
>CAF1A_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-1 subunit A)| (Chromatin assembly factor I p150 subunit) (CAF-I 150 kDa subunit) (CAF-Ip150) Length = 938 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = +2 Query: 209 PFAGPAPRYFHSTLPRRYAAPEPRAVPLSRLTDSFLDGTSSVYLEELQRAWE 364 P PAP HS+ +P P + PL R+T F+ G++ LQR E Sbjct: 278 PEGPPAPPKQHSS-----TSPFPTSTPLRRITKKFVKGSTEKNKLRLQRDQE 324
>PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing protein| phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat protein phosphatase) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory Length = 1687 Score = 28.9 bits (63), Expect = 3.1 Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 19/111 (17%) Frame = -1 Query: 393 QDSSTEVGSASHARCSSSRYTLLVPS--RKLSVRRES----------GTARGSGAAYRRG 250 +D + +A RC + PS + R E+ G A G+G RRG Sbjct: 18 EDQALAAAAAEGGRCPDPALSAAAPSGGNGGAAREEAPCEAPPGPLPGRAGGTGRRRRRG 77 Query: 249 SVEWKYRGAGP-------ANGLAGARDRLLRSATRAKPDAARNSPIFRSNS 118 + + GA P AN L R RL R+ + A ++ +SP S++ Sbjct: 78 APQPAAGGAAPVPAAGGGANSLLLKRGRLKRNLSAAAAASSSSSPSSASSA 128
>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2| Length = 964 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 6/60 (10%) Frame = -3 Query: 169 PG*TRRGPEQPHFQIEFPLPTPNLAAEKREIVPIFGGRMPGAG------STHDAAARGRG 8 PG RGP P P P AA + P GG PG G S D GRG Sbjct: 284 PGGDNRGPRPAGAGDRGPRPAPAAAAPSQPPAPAPGGSRPGKGKKGGERSWDDNKKGGRG 343
>ATL1H_ARATH (Q9C7I1) Putative RING-H2 finger protein ATL1H precursor| Length = 327 Score = 28.9 bits (63), Expect = 3.1 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 4/56 (7%) Frame = -1 Query: 339 RYTLLVPS---RKLSVRRESGTARGSGAAYRRGSVEWKYRGAGPANGLA-GARDRL 184 R+TL +P R+LS + AR S YR GSV + RG G G+ DRL Sbjct: 267 RFTLQLPEEVRRQLSHMKTLPQARSSREGYRSGSVGSERRGKGKEKEFGEGSFDRL 322
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -2 Query: 167 GLNPTRPGTAPFSDRIPSPDAKSSRGKKRNRPDLR 63 G P++ AP + +PSP +S G RP+LR Sbjct: 1982 GRAPSKDQEAPSPEALPSPGQESPDGPSPRRPELR 2016
>CABP4_HUMAN (P57796) Calcium-binding protein 4 (CaBP4)| Length = 275 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/41 (39%), Positives = 17/41 (41%) Frame = -2 Query: 191 TGSSAAPPGLNPTRPGTAPFSDRIPSPDAKSSRGKKRNRPD 69 TG A NP G P SP SSR R+RPD Sbjct: 62 TGPEAPGSSNNPPSTGEGPAGAPPASPGPASSRQSHRHRPD 102
>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Liver regeneration-related protein LRRG077) Length = 533 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -1 Query: 297 RESGTARGSGAAYRRGSVEWKYRGA-GPANGLAGAR 193 R + +RG GAA RG + RG G A G+ GAR Sbjct: 414 RGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGAR 449 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -1 Query: 282 ARGSGAAYRRGSVEWKYRGAGPANGLAGARDR 187 ARG G RG+ + RGA P G AG R Sbjct: 405 ARGRGGRGARGAAPSRGRGAAPPRGRAGYSQR 436
>HMEN_ARTSF (Q05640) Homeobox protein engrailed| Length = 349 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -2 Query: 182 SAAPPGLNPTRPGTAPFSDRIPSP 111 SA+ PG +P RPG+A S + SP Sbjct: 32 SASTPGPSPDRPGSATMSSPLSSP 55
>EXO84_YARLI (Q6C238) Exocyst complex component EXO84| Length = 657 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%) Frame = -3 Query: 145 EQPHFQIEFPLPTPNLAAEKREIVPI-----FGGRMPGAGSTHDAAA 20 ++P+ Q L PN+ + RE V F R+PG G +DAAA Sbjct: 29 QKPYIQDSTHLQLPNVGDKDRERVGNMVKRRFSARIPGQGVPYDAAA 75
>PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing protein| phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat protein phosphatase) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory Length = 1717 Score = 28.1 bits (61), Expect = 5.3 Identities = 19/59 (32%), Positives = 27/59 (45%) Frame = -1 Query: 288 GTARGSGAAYRRGSVEWKYRGAGPANGLAGARDRLLRSATRAKPDAARNSPIFRSNSLS 112 G A G+G RRG+ + GA P G G + LL R K + + + S+S S Sbjct: 85 GRAGGAGRRRRRGAPQPIAGGAAPVPGAGGGANSLLLRRGRLKRNLSAAAAAASSSSSS 143
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -2 Query: 158 PTRPGTAPFSDRIPSPDAKSSRGKKRNRPDLR 63 P++ AP + +PSP +S G RP+LR Sbjct: 1985 PSKDQEAPSPEALPSPGQESPDGPSPRRPELR 2016
>IF2_BRAJA (Q89WA9) Translation initiation factor IF-2| Length = 902 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%) Frame = -2 Query: 203 PERATGSSAAPPGLNPTRPGTA---PFSDRIPSPDAKSSRG 90 P G+ AA PG TRPGT P + P A + RG Sbjct: 192 PAPRPGAPAARPGTTTTRPGTTTARPATTTAQRPGAPAGRG 232
>TR2M_AGRRH (Q09109) Tryptophan 2-monooxygenase (EC 1.13.12.3)| Length = 749 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +1 Query: 88 FPRLDLASGEGIRSENGAVPGRVGFSPGGAAEEPVARSG 204 FP +DL G E+ A GR+G+ P G + VA G Sbjct: 190 FPTVDLLYDYGKFFESCAADGRIGYFPEGVTKPKVAIIG 228
>ERF2_SCHPO (O74718) Eukaryotic peptide chain release factor GTP-binding| subunit (ERF2) (Translation release factor 3) (Polypeptide release factor 3) (ERF3) (ERF-3) Length = 662 Score = 28.1 bits (61), Expect = 5.3 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = +2 Query: 221 PAPRYFHSTLPRRYAAPEPRAVPLSRLTDSFLDGTSSVYLEELQRAWE-ADPTSVDE 388 PAP+ + + AAP P+ P ++ D+ L T S L++A E A+P +V E Sbjct: 161 PAPKVTSESTKKETAAPPPQETP-TKSADAELAKTPSAPAAALKKAAEAAEPATVTE 216
>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) (pp68) Length = 623 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -1 Query: 297 RESGTARGSGAAYRRGSVEWKYRGA-GPANGLAGAR 193 R + +RG GAA RG + RG G A G+ GAR Sbjct: 504 RGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGAR 539 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -1 Query: 282 ARGSGAAYRRGSVEWKYRGAGPANGLAGARDR 187 ARG G RG+ + RGA P G AG R Sbjct: 495 ARGRGGRGARGAAPSRGRGAAPPRGRAGYSQR 526
>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) Length = 623 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -1 Query: 297 RESGTARGSGAAYRRGSVEWKYRGA-GPANGLAGAR 193 R + +RG GAA RG + RG G A G+ GAR Sbjct: 504 RGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGAR 539 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -1 Query: 282 ARGSGAAYRRGSVEWKYRGAGPANGLAGARDR 187 ARG G RG+ + RGA P G AG R Sbjct: 495 ARGRGGRGARGAAPSRGRGAAPPRGRAGYSQR 526
>FCRL_HUMAN (Q7L513) Fc receptor-like and mucin-like 1 precursor (Fc receptor| homolog expressed in B-cells) (Fc receptor related protein X) (FcRX) (Fc receptor-like protein) Length = 359 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 5/34 (14%) Frame = -2 Query: 197 RATGSSAAPPGLNP-----TRPGTAPFSDRIPSP 111 + SSAAPP LNP PGTAP + P P Sbjct: 261 QGASSSAAPPTLNPAPQKSAAPGTAP--EEAPGP 292
>MAP4_BOVIN (P36225) Microtubule-associated protein 4 (MAP 4)| (Microtubule-associated protein-U) (MAP-U) Length = 1072 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 4/45 (8%) Frame = -2 Query: 194 ATGSSAAPPGLNP----TRPGTAPFSDRIPSPDAKSSRGKKRNRP 72 A+GS A P P +RP T P D P P A++ +KR P Sbjct: 691 ASGSVPAAPPKRPAAATSRPSTLPSKDTKPKPVAEAKIPEKRVSP 735
>FABD_HUMAN (Q8IVS2) Malonyl CoA-acyl carrier protein transacylase,| mitochondrial precursor (EC 2.3.1.39) (MCT) (Mitochondrial malonyltransferase) Length = 390 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/43 (44%), Positives = 25/43 (58%) Frame = -1 Query: 279 RGSGAAYRRGSVEWKYRGAGPANGLAGARDRLLRSATRAKPDA 151 RG GA+YRRG+ + G A G+A LLR AT A+ +A Sbjct: 12 RGLGASYRRGASSFPVPPPG-AQGVA----ELLRDATGAEEEA 49
>ODO1_AZOVI (P20707) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 943 Score = 27.7 bits (60), Expect = 6.9 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +2 Query: 314 LDGTSSVYLEELQRAWEADPTSVDESW 394 L G ++ Y+EEL + DP +V E W Sbjct: 15 LSGGNAAYVEELYELYLHDPNAVPEEW 41
>SAFB1_RAT (O88453) Scaffold attachment factor B (Scaffold attachment factor| B1) (SAF-B) Length = 931 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +1 Query: 109 SGEGIRSENGAVPGRVGFSPGGAAEEPVARSG 204 SG G G + GR F+PGGA+ V G Sbjct: 884 SGPGHMMNRGGMSGRGSFAPGGASRRHVIPRG 915
>NTAN1_MOUSE (Q64311) Protein N-terminal asparagine amidohydrolase (EC 3.5.1.-)| (Protein NH2-terminal asparagine deamidase) (N-terminal Asn amidase) (NTN-amidase) (PNAD) (Protein NH2-terminal asparagine amidohydrolase) (PNAA) Length = 309 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/28 (60%), Positives = 18/28 (64%) Frame = -3 Query: 394 PGLVDGGRVRLPRPLQLLEVHAAGPIEE 311 P LVDG RVRLPR L V A P+EE Sbjct: 1 PLLVDGQRVRLPRSAVEL-VRAHPPLEE 27
>UCRIA_ORYSA (Q69S39) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 225 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -1 Query: 219 PANGLAGARDRLLRSATRAKPDAARNSPIFRSNSLSRRQI 100 P GL R+R+ R+AT AA + P R + +RQ+ Sbjct: 25 PVKGLGFGRERVPRTATTITCQAASSIPADRVPDMGKRQL 64
>SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Shank3)| (Proline-rich synapse associated protein 2) (ProSAP2) (SPANK-2) Length = 1815 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/48 (27%), Positives = 20/48 (41%) Frame = -3 Query: 151 GPEQPHFQIEFPLPTPNLAAEKREIVPIFGGRMPGAGSTHDAAARGRG 8 GPE+ + +P E ++ + GR P + S D GRG Sbjct: 839 GPEKLPGSLRKGIPRTKSVGEDEKLASLLEGRFPRSTSMQDTVREGRG 886
>PSI1_SCHPO (Q09912) Protein psi1 (Protein psi)| Length = 379 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = +1 Query: 97 LDLASGEGIRSENGAVPGRVGFSPGGAAEEPVARSGEP 210 +D+ G G R+ G +PG GG P AR P Sbjct: 153 MDMDGGFGTRTRGGGMPGGFANMFGGGGAGPHARRSHP 190
>CSMD1_HUMAN (Q96PZ7) CUB and sushi domain-containing protein 1 precursor (CUB and| sushi multiple domains protein 1) Length = 3565 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +1 Query: 88 FPRLDLASGEGIRSENGAVPGRVGFSPGGAAEEPVAR 198 FPR D G + S+NG + +SPG E P+ + Sbjct: 2140 FPRCDAPCGYNVTSQNGTI-----YSPGFPDEYPILK 2171
>B2L12_HUMAN (Q9HB09) Bcl-2-related proline-rich protein (Bcl-2-like 12 protein)| Length = 334 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Frame = -1 Query: 261 YRRGSVEWKYR--GAGPANGLAGARDRLLRSAT 169 +RR VEW+ R G GP +AG+ + LR T Sbjct: 65 WRRPQVEWRRRRWGPGPGASMAGSEELGLREDT 97
>CAC1D_CHICK (O73700) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (CHCACHA1D) Length = 2190 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = -2 Query: 203 PERATGSSAAPPGLNPTRPGTAPFSDRIPSPDAKSSRGKKRNRPDLRWKNAW 48 P R+T S A PP P R T ++ I A+S+ + P L +++W Sbjct: 2003 PSRSTRSWATPPATPPNRDHTPYYTPLIQVDRAESTEHMNGSLPSLH-RSSW 2053
>CSMD1_MOUSE (Q923L3) CUB and sushi domain-containing protein 1 precursor (CUB and| sushi multiple domains protein 1) Length = 3564 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +1 Query: 88 FPRLDLASGEGIRSENGAVPGRVGFSPGGAAEEPVAR 198 FPR D G + S+NG + +SPG E P+ + Sbjct: 2139 FPRCDAPCGYNVTSQNGTI-----YSPGFPDEYPILK 2170 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,894,496 Number of Sequences: 219361 Number of extensions: 1036941 Number of successful extensions: 5049 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 4552 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5040 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
