>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1|
          Length = 1051

 Score =  106 bits (265), Expect = 2e-23
 Identities = 56/73 (76%), Positives = 56/73 (76%)
 Frame = +3

Query: 216 MLPRKREIVAGEVEDLQKKXXXXXXXXXXXXXXXXMARRGNEIDEDLHSRQLAVYGRETM 395
           MLPRKREIVAGEVEDLQKK                MA RGNEIDEDLHSRQLAVYGRETM
Sbjct: 1   MLPRKREIVAGEVEDLQKKTRAGEGEVTREEGDAAMAGRGNEIDEDLHSRQLAVYGRETM 60

Query: 396 KRLFGSNVLVSGL 434
           KRLFGSNVLVSGL
Sbjct: 61  KRLFGSNVLVSGL 73

>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2|
          Length = 1051

 Score =  104 bits (259), Expect = 1e-22
 Identities = 55/73 (75%), Positives = 55/73 (75%)
 Frame = +3

Query: 216 MLPRKREIVAGEVEDLQKKXXXXXXXXXXXXXXXXMARRGNEIDEDLHSRQLAVYGRETM 395
           MLPRKREIVAGEVEDLQKK                MA RGNEIDEDLHSRQLAVYGRETM
Sbjct: 1   MLPRKREIVAGEVEDLQKKTRAGEGEATREEGDAAMAGRGNEIDEDLHSRQLAVYGRETM 60

Query: 396 KRLFGSNVLVSGL 434
           K LFGSNVLVSGL
Sbjct: 61  KPLFGSNVLVSGL 73

>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3|
          Length = 1053

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +3

Query: 339 EIDEDLHSRQLAVYGRETMKRLFGSNVLVSGL 434
           EIDEDLHSRQLAVYGRETM+RLF S+VLVSGL
Sbjct: 45  EIDEDLHSRQLAVYGRETMRRLFASDVLVSGL 76

>UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1|
          Length = 1058

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 26/40 (65%), Positives = 30/40 (75%), Gaps = 2/40 (5%)
 Frame = +3

Query: 321 MARRGNE--IDEDLHSRQLAVYGRETMKRLFGSNVLVSGL 434
           MA+ G+E  IDE L+SRQL V G E MKRL  S+VLVSGL
Sbjct: 41  MAKNGSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGL 80

>UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein)|
          Length = 1058

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 26/40 (65%), Positives = 30/40 (75%), Gaps = 2/40 (5%)
 Frame = +3

Query: 321 MARRGNE--IDEDLHSRQLAVYGRETMKRLFGSNVLVSGL 434
           MA+ G+E  IDE L+SRQL V G E MKRL  S+VLVSGL
Sbjct: 41  MAKNGSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGL 80

>UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1|
          Length = 1058

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 25/40 (62%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
 Frame = +3

Query: 321 MARRGNE--IDEDLHSRQLAVYGRETMKRLFGSNVLVSGL 434
           MA+ G+E  IDE L+SRQL V G E MK L  S+VLVSGL
Sbjct: 41  MAKNGSEADIDESLYSRQLYVLGHEAMKMLQTSSVLVSGL 80

>UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1|
          Length = 1024

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = +3

Query: 339 EIDEDLHSRQLAVYGRETMKRLFGSNVLVSGL 434
           EIDE L+SRQL V G+E M ++  SNVL+ GL
Sbjct: 13  EIDESLYSRQLYVLGKEAMLKMQTSNVLILGL 44

>UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ RNA transport|
           protein 3)
          Length = 1012

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +3

Query: 336 NEIDEDLHSRQLAVYGRETMKRLFGSNVLVSG 431
           N IDE L+SRQL V G E MK++  SNVL+ G
Sbjct: 13  NTIDEGLYSRQLYVLGHEAMKQMSQSNVLIIG 44

>UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8)|
          Length = 1011

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = +3

Query: 342 IDEDLHSRQLAVYGRETMKRLFGSNVLVSGL 434
           +DE+L+SRQL V G   M+R+ G+ VLVSGL
Sbjct: 10  LDEELYSRQLYVLGSPAMQRIQGARVLVSGL 40

>CP2D6_HUMAN (P10635) Cytochrome P450 2D6 (EC 1.14.14.1) (CYPIID6) (P450-DB1)|
           (Debrisoquine 4-hydroxylase)
          Length = 497

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 22/49 (44%), Positives = 26/49 (53%)
 Frame = -3

Query: 404 EALHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 258
           EAL  LA I   +A   +LVDL+         + PG LPLPG G LL V
Sbjct: 4   EALVPLAVI---VAIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49

>CP2DP_PIG (O46658) Cytochrome P450 2D25 (EC 1.14.14.-) (CYPIID25) (Vitamin|
           D(3) 25-hydroxylase)
          Length = 499

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -3

Query: 353 VLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 258
           +LVDL+         + PG +PLPG G LLQV
Sbjct: 20  LLVDLMHRRSRWAPRYPPGPMPLPGLGNLLQV 51

>TPT_MAIZE (P49133) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 409

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 106 RRETLDPPVASGKEAGEGRSV 44
           RR TL PP A+ + AGE +SV
Sbjct: 77  RRHTLQPPAAAAESAGEAKSV 97

>CP2DH_MACFA (Q29488) Cytochrome P450 2D17 (EC 1.14.14.1) (CYPIID17)|
          Length = 497

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -3

Query: 398 LHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 258
           L  L  +   +A   +LVDL+         + PG LPLPG G LL V
Sbjct: 3   LDALVPLAVTVAIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49

>CP2D6_PANTR (Q2XNC8) Cytochrome P450 2D6 (EC 1.14.14.1) (CYPIID6)|
          Length = 497

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 21/49 (42%), Positives = 25/49 (51%)
 Frame = -3

Query: 404 EALHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 258
           EAL  LA I   +    +LVDL+         + PG LPLPG G LL V
Sbjct: 4   EALVPLAVI---VTIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49

>CP2D6_PANPA (Q2XNC9) Cytochrome P450 2D6 (EC 1.14.14.1) (CYPIID6)|
          Length = 497

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 21/49 (42%), Positives = 25/49 (51%)
 Frame = -3

Query: 404 EALHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 258
           EAL  LA I   +    +LVDL+         + PG LPLPG G LL V
Sbjct: 4   EALVPLAVI---VTIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49

>CP2DQ_RAT (P10634) Cytochrome P450 2D26 (EC 1.14.14.1) (CYPIID26) (P450-DB2)|
           (P450-CMF2) (Debrisoquine 4-hydroxylase)
          Length = 500

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = -3

Query: 353 VLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 258
           +LVDLV         + PG +PLPG G LLQV
Sbjct: 21  LLVDLVHRHKFWTAHYPPGPVPLPGLGNLLQV 52

>YBHO_SALTY (Q8ZQP4) Putative cardiolipin synthetase ybhO (EC 2.7.8.-)|
           (Cardiolipin synthase) (CL synthase)
          Length = 413

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +2

Query: 353 PAQSPARRLWPRDHEA 400
           P QSPARR W R H+A
Sbjct: 168 PGQSPARRWWKRHHQA 183

>YBHO_SALTI (Q8Z883) Putative cardiolipin synthetase ybhO (EC 2.7.8.-)|
           (Cardiolipin synthase) (CL synthase)
          Length = 413

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +2

Query: 353 PAQSPARRLWPRDHEA 400
           P QSPARR W R H+A
Sbjct: 168 PGQSPARRWWKRHHQA 183

>CP2DJ_CALJA (O18992) Cytochrome P450 2D19 (EC 1.14.14.1) (CYPIID19) (P450|
           CM2D-1)
          Length = 497

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = -3

Query: 398 LHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 258
           L  L  +   +A   +LVDL+         + PG +PLPG G LL V
Sbjct: 3   LDALVPLAVTVAIFVLLVDLMHRRQRWAARYPPGPMPLPGLGNLLHV 49

>LEU1_STRCO (O31046) 2-isopropylmalate synthase (EC 2.3.3.13)|
           (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase)
          Length = 573

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 7   CNPVLQSHPRNPRRTVPRLLPSPTRQADPRFRGGRTRWI*RGSSRR 144
           C  V+ ++   P R +   LP+   ++ P     R  W+ R  SRR
Sbjct: 200 CEAVMDTYQPGPGREIILNLPATVERSTPSTHADRFEWMGRNLSRR 245

>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)|
          Length = 1388

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 82   VASGKEAGEGRSV*GFWDGTGGPD 11
            V +GK  G+G++V GF DGT   D
Sbjct: 1361 VVNGKGKGKGKAVAGFQDGTASDD 1384

>CP2DQ_MOUSE (Q8CIM7) Cytochrome P450 2D26 (EC 1.14.14.1) (CYPIID26)|
          Length = 500

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -3

Query: 353 VLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 258
           +LVDLV         + PG +P PG G LLQV
Sbjct: 21  LLVDLVHRRQRWTACYPPGPVPFPGLGNLLQV 52

>CP2DG_CAVPO (Q64403) Cytochrome P450 2D16 (EC 1.14.14.1) (CYPIID16)|
          Length = 500

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -3

Query: 368 LATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 258
           +A   +LVDL+         + PG +P+PG G LLQV
Sbjct: 16  VAIFLLLVDLMHRRQRWAARYPPGPVPVPGLGNLLQV 52


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,928,142
Number of Sequences: 219361
Number of extensions: 847251
Number of successful extensions: 3302
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3301
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)