ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl46g12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (U... 258 7e-66
2gb|M90663.1|WHTE1A Wheat ubiquitin activating enzyme (E1) mRNA, ... 180 1e-42
3gb|AY597048.1| Oncorhynchus mykiss macrophage myristoylated alan... 44 0.19
4emb|AJ278573.1|SNA278573 Streptomyces natalensis pimaricin biosy... 44 0.19
5dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.19
6emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ... 42 0.74
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.74
8dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.74
9gb|AF202898.1|AF202898 Streptomyces coelicolor A3(2) type I poly... 42 0.74
10dbj|AK111781.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.74
11gb|DQ333391.1| Cervid herpesvirus 2 glycoprotein C gene, complet... 42 0.74
12gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.74
13gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.74
14emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa... 42 0.74
15emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa... 42 0.74
16emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa... 42 0.74
17gb|M96060.1|ABCCCPENGA Acetobacter xylinum cellulose synthase (b... 42 0.74
18gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 2.9
19gb|AY657515.1| Synthetic construct Peudomonas aeruginosa clone F... 40 2.9
20ref|NM_020964.2| Homo sapiens KIAA1632 (KIAA1632), mRNA 40 2.9
21gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 2.9
22gb|AC154402.2| Mus musculus BAC clone RP24-235N24 from chromosom... 40 2.9
23gb|DQ352994.1| Apomyrma stygia voucher RA0120 abdominal-A (AbdA)... 40 2.9
24gb|DQ352869.1| Pachycondyla stigma voucher RA0243 abdominal-A (A... 40 2.9
25gb|AC087685.9| Homo sapiens chromosome 18, clone RP11-618K16, co... 40 2.9
26emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 2.9
27gb|AE005784.1| Caulobacter crescentus CB15 section 110 of 359 of... 40 2.9
28dbj|AK094080.1| Homo sapiens cDNA FLJ36761 fis, clone UTERU2018884 40 2.9
29gb|AC090355.9| Homo sapiens chromosome 18, clone RP11-745C22, co... 40 2.9
30gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 2.9
31gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome 40 2.9
32dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 2.9
33gb|AE004563.1| Pseudomonas aeruginosa PAO1, section 124 of 529 o... 40 2.9
34gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 2.9
35gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 2.9
36gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 2.9
37emb|CT009762.8| Mouse DNA sequence from clone RP23-211O9 on chro... 40 2.9
38dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 2.9
39dbj|D45381.1| Carassius auratus mRNA for AMPA-type glutamate rec... 40 2.9
40gb|U12018.1|CAU12018 Carassius auratus glutamate receptor 4 (glu... 40 2.9
41dbj|AB028740.1| Mus musculus drba gene for drebrin A, partial cds 40 2.9 
>gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds
          Length = 3586

 Score =  258 bits (130), Expect = 7e-66
 Identities = 177/194 (91%), Gaps = 9/194 (4%)
 Strand = Plus / Plus

                                                                       
Query: 44  gaccgtccctcgcctgcttccttccccgacgcgacaggcgaatccaaggtttcgcggcgg 103
           ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 6   gaccgtcgctcgcctgcttccttcaccgacgcgacaggcgaatccaaggtttcgcggcgg 65

                                                                       
Query: 104 ---------tcgcacgcgctggatctgacgcggcagctcccggcggccgtctactactgc 154
                    | ||||||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 66  ttgcggccctagcacgcgctggatctgacgcggcagctcccggcggccgcgtactactgc 125

                                                                       
Query: 155 ctgctcttcgccgcgtcggcggccgtcctcgggctcctcggcggcgtcgcgcgctatacg 214
           ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 126 ctgctcttcgctgcgtcggcggctgtcctcgggctcctcggcggcgtcgcgcgctatatg 185

                         
Query: 215 cttccccggaagcg 228
           ||||||||||||||
Sbjct: 186 cttccccggaagcg 199
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>gb|M90663.1|WHTE1A Wheat ubiquitin activating enzyme (E1) mRNA, complete cds
          Length = 3695

 Score =  180 bits (91), Expect = 1e-42
 Identities = 117/123 (95%), Gaps = 2/123 (1%)
 Strand = Plus / Plus

                                                                       
Query: 106 gcacgcgctggatctgacgcggcagctcccggcggccgtctactactgcctgctcttcgc 165
           ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||
Sbjct: 174 gcacgcgctggatctgacgcg-cagctcccggcggccgcgtactactgcctgctcttcgc 232

                                                                       
Query: 166 cgcgtcggcggccgtcctcgggctcctcggcggcgtcgcgcgctatacgcttccccggaa 225
            |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 233 tgcgtcggcggccgtcctcgggctcctcggc-gcgtcgcgcgctatatgcttccccggaa 291

              
Query: 226 gcg 228
           |||
Sbjct: 292 gcg 294



 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 66/73 (90%), Gaps = 5/73 (6%)
 Strand = Plus / Plus

                                                                      
Query: 22 cccatcccagaaaccctagacggaccgtccctcgcctgctt-ccttccccgacgcgacag 80
          |||| ||||||||||||||||    |||| ||||||||||| ||||||||||||||||||
Sbjct: 8  cccagcccagaaaccctagac----cgtcgctcgcctgctttccttccccgacgcgacag 63

                       
Query: 81 gcgaatccaaggt 93
          |||||||||||||
Sbjct: 64 gcgaatccaaggt 76
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>gb|AY597048.1| Oncorhynchus mykiss macrophage myristoylated alanine-rich C
           kinase-like protein mRNA, complete cds
          Length = 1307

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 181 cctcgggctcctcggcggcgtc 202
           ||||||||||||||||||||||
Sbjct: 389 cctcgggctcctcggcggcgtc 368
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>emb|AJ278573.1|SNA278573 Streptomyces natalensis pimaricin biosynthetic gene cluster
          Length = 84985

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 178  cgtcctcgggctcctcggcggc 199
            ||||||||||||||||||||||
Sbjct: 8332 cgtcctcgggctcctcggcggc 8353
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 177     ccgtcctcgggctcctcggcggcgtc 202
               |||||||||||| |||||||||||||
Sbjct: 4787528 ccgtcctcgggcgcctcggcggcgtc 4787503
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>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29
          Length = 314100

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 161    ttcgccgcgtcggcggccgtc 181
              |||||||||||||||||||||
Sbjct: 112596 ttcgccgcgtcggcggccgtc 112616
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 113    ctggatctgacgcggcagctc 133
              |||||||||||||||||||||
Sbjct: 317350 ctggatctgacgcggcagctc 317330
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 113    ctggatctgacgcggcagctc 133
              |||||||||||||||||||||
Sbjct: 300382 ctggatctgacgcggcagctc 300362
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>gb|AF202898.1|AF202898 Streptomyces coelicolor A3(2) type I polyketide synthase gene,
            partial cds
          Length = 2203

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 176  gccgtcctcgggctcctcggc 196
            |||||||||||||||||||||
Sbjct: 1431 gccgtcctcgggctcctcggc 1411
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>dbj|AK111781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083B12, full
           insert sequence
          Length = 3724

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 ctggatctgacgcggcagctc 133
           |||||||||||||||||||||
Sbjct: 225 ctggatctgacgcggcagctc 245
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>gb|DQ333391.1| Cervid herpesvirus 2 glycoprotein C gene, complete cds
          Length = 1522

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 184  cgggctcctcggcggcgtcgcgcgc 208
            |||||||||||||| ||||||||||
Sbjct: 1188 cgggctcctcggcgccgtcgcgcgc 1164
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 113    ctggatctgacgcggcagctc 133
              |||||||||||||||||||||
Sbjct: 300382 ctggatctgacgcggcagctc 300362
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 113    ctggatctgacgcggcagctc 133
              |||||||||||||||||||||
Sbjct: 317350 ctggatctgacgcggcagctc 317330
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>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 160673

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 113  ctggatctgacgcggcagctc 133
            |||||||||||||||||||||
Sbjct: 4611 ctggatctgacgcggcagctc 4631
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>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152222

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 113   ctggatctgacgcggcagctc 133
             |||||||||||||||||||||
Sbjct: 50401 ctggatctgacgcggcagctc 50381
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>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 164143

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 113  ctggatctgacgcggcagctc 133
            |||||||||||||||||||||
Sbjct: 7700 ctggatctgacgcggcagctc 7680
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>gb|M96060.1|ABCCCPENGA Acetobacter xylinum cellulose synthase (bcsA) gene, partial cds,
           CMCax and CcpAx genes, complete cds
          Length = 2731

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 156 tgctcttcgccgcgtcggcgg 176
           |||||||||||||||||||||
Sbjct: 585 tgctcttcgccgcgtcggcgg 605
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 88      caaggtttcgcggcggtcgc 107
               ||||||||||||||||||||
Sbjct: 1950645 caaggtttcgcggcggtcgc 1950626
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>gb|AY657515.1| Synthetic construct Peudomonas aeruginosa clone FLH040573.01F
           PA1340 gene, partial cds
          Length = 669

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 179 gtcctcgggctcctcggcggcgtcgcgc 206
           ||||||||  ||||||||||||||||||
Sbjct: 76  gtcctcggcgtcctcggcggcgtcgcgc 103
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>ref|NM_020964.2| Homo sapiens KIAA1632 (KIAA1632), mRNA
          Length = 12715

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   tctactactgcctgctcttc 163
             ||||||||||||||||||||
Sbjct: 11976 tctactactgcctgctcttc 11995
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 88      caaggtttcgcggcggtcgc 107
               ||||||||||||||||||||
Sbjct: 1480472 caaggtttcgcggcggtcgc 1480491
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>gb|AC154402.2| Mus musculus BAC clone RP24-235N24 from chromosome 13, complete sequence
          Length = 145213

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     cctccagtcccatcccagaa 33
              ||||||||||||||||||||
Sbjct: 106545 cctccagtcccatcccagaa 106564
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>gb|DQ352994.1| Apomyrma stygia voucher RA0120 abdominal-A (AbdA) gene, partial cds
          Length = 531

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 186 ggctcctcggcggcgtcgcgcgct 209
           |||||||||||||||||| |||||
Sbjct: 358 ggctcctcggcggcgtcgagcgct 381
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>gb|DQ352869.1| Pachycondyla stigma voucher RA0243 abdominal-A (AbdA) gene, partial
           cds
          Length = 648

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 186 ggctcctcggcggcgtcgcgcgct 209
           |||||||||||||||||| |||||
Sbjct: 361 ggctcctcggcggcgtcgagcgct 384
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>gb|AC087685.9| Homo sapiens chromosome 18, clone RP11-618K16, complete sequence
          Length = 155807

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   tctactactgcctgctcttc 163
             ||||||||||||||||||||
Sbjct: 39017 tctactactgcctgctcttc 39036
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 88      caaggtttcgcggcggtcgc 107
               ||||||||||||||||||||
Sbjct: 1367581 caaggtttcgcggcggtcgc 1367600
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>gb|AE005784.1| Caulobacter crescentus CB15 section 110 of 359 of the complete genome
          Length = 10300

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  tcgccgcgtcggcggccgtc 181
            ||||||||||||||||||||
Sbjct: 7623 tcgccgcgtcggcggccgtc 7604
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>dbj|AK094080.1| Homo sapiens cDNA FLJ36761 fis, clone UTERU2018884
          Length = 3017

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 144  tctactactgcctgctcttc 163
            ||||||||||||||||||||
Sbjct: 2296 tctactactgcctgctcttc 2315
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>gb|AC090355.9| Homo sapiens chromosome 18, clone RP11-745C22, complete sequence
          Length = 186783

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   tctactactgcctgctcttc 163
             ||||||||||||||||||||
Sbjct: 17512 tctactactgcctgctcttc 17493
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    gccgtcctcgggctcctcgg 195
              ||||||||||||||||||||
Sbjct: 474763 gccgtcctcgggctcctcgg 474744
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>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome
          Length = 195859

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 155    ctgctcttcgccgcgtcggcggcc 178
              |||||||||||||||||| |||||
Sbjct: 139449 ctgctcttcgccgcgtcgccggcc 139472
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    gacggaccgtccctcgcctg 59
             ||||||||||||||||||||
Sbjct: 86184 gacggaccgtccctcgcctg 86203
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>gb|AE004563.1| Pseudomonas aeruginosa PAO1, section 124 of 529 of the complete
            genome
          Length = 9937

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 179  gtcctcgggctcctcggcggcgtcgcgc 206
            ||||||||  ||||||||||||||||||
Sbjct: 7753 gtcctcggcgtcctcggcggcgtcgcgc 7726
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 125     cggcagctcccggcggccgt 144
               ||||||||||||||||||||
Sbjct: 2129561 cggcagctcccggcggccgt 2129542
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 182     ctcgggctcctcggcggcgtcgcg 205
               |||||||| |||||||||||||||
Sbjct: 2637365 ctcgggctgctcggcggcgtcgcg 2637388
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 167     gcgtcggcggccgtcctcgggctc 190
               |||||||||||| |||||||||||
Sbjct: 1756399 gcgtcggcggccatcctcgggctc 1756422
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>emb|CT009762.8| Mouse DNA sequence from clone RP23-211O9 on chromosome 13, complete
             sequence
          Length = 229171

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    cctccagtcccatcccagaa 33
             ||||||||||||||||||||
Sbjct: 58389 cctccagtcccatcccagaa 58370
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 157     gctcttcgccgcgtcggcggccgtcctcgggc 188
               |||||||||||| || ||||||||||| ||||
Sbjct: 1854212 gctcttcgccgcctctgcggccgtcctggggc 1854243
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>dbj|D45381.1| Carassius auratus mRNA for AMPA-type glutamate receptor, partial cds
          Length = 2703

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  gccgtcctcgggctcctcgg 195
            ||||||||||||||||||||
Sbjct: 1731 gccgtcctcgggctcctcgg 1712
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>gb|U12018.1|CAU12018 Carassius auratus glutamate receptor 4 (glur4) mRNA, partial cds
          Length = 3613

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  gccgtcctcgggctcctcgg 195
            ||||||||||||||||||||
Sbjct: 1731 gccgtcctcgggctcctcgg 1712
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>dbj|AB028740.1| Mus musculus drba gene for drebrin A, partial cds
          Length = 20387

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    cctccagtcccatcccagaa 33
             ||||||||||||||||||||
Sbjct: 20315 cctccagtcccatcccagaa 20296


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,233,741
Number of Sequences: 3902068
Number of extensions: 1233741
Number of successful extensions: 31199
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29785
Number of HSP's gapped (non-prelim): 1410
length of query: 228
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 206
effective length of database: 17,147,199,772
effective search space: 3532323153032
effective search space used: 3532323153032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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