Clone Name | bastl46g10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit ... | 138 | 5e-33 | 2 | PDE2A_HUMAN (O00408) cGMP-dependent 3',5'-cyclic phosphodiestera... | 30 | 3.0 | 3 | STK6_XENLA (Q91820) Serine/threonine-protein kinase Eg2 (EC 2.7.... | 28 | 6.7 |
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>IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34| (eIF-(iso)4F p82-34) Length = 788 Score = 138 bits (348), Expect = 5e-33 Identities = 71/89 (79%), Positives = 75/89 (84%) Frame = +3 Query: 156 MTTDQPVISLXXXXXXXXXXXXXLFAPAFAVAASGSGDFLRPHGGGASGVSRIGDLHFET 335 MTTDQPVISL LFAPAFAVAASGSGDFLRPHGGGASGVSRIGDLH E+ Sbjct: 1 MTTDQPVISLRPGGGGGGPRGGRLFAPAFAVAASGSGDFLRPHGGGASGVSRIGDLHSES 60 Query: 336 RERIRYSRDQLLDLRKITDISEQILRLQQ 422 RER+RYSRDQLLDLRKITD++EQILRLQQ Sbjct: 61 RERVRYSRDQLLDLRKITDVTEQILRLQQ 89
>PDE2A_HUMAN (O00408) cGMP-dependent 3',5'-cyclic phosphodiesterase (EC| 3.1.4.17) (Cyclic GMP-stimulated phosphodiesterase) (CGS-PDE) (cGSPDE) Length = 941 Score = 29.6 bits (65), Expect = 3.0 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +2 Query: 11 RSQTEPNPPPREEGKKKLGFLRDFLPGAPPIPCRSSCRGALVGFGTL 151 RSQ P P E +++ FL+ P PP PC S + AL+ G++ Sbjct: 12 RSQQYPAARPAEPRGQQV-FLKPDEPPPPPQPCADSLQDALLSLGSV 57
>STK6_XENLA (Q91820) Serine/threonine-protein kinase Eg2 (EC 2.7.11.1) (pEg2)| (p46Eg265) Length = 407 Score = 28.5 bits (62), Expect = 6.7 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +2 Query: 5 GERSQTEPNPPPREEGKKKLGFLRDFLPGAP 97 G Q + + P+EEGKKK L DF G P Sbjct: 115 GSTDQGKTSAVPKEEGKKKQWCLEDFEIGRP 145 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,430,462 Number of Sequences: 219361 Number of extensions: 672377 Number of successful extensions: 2681 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2562 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2680 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)