Clone Name | bastl46g07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | KSGA_SILPO (Q5LQN0) Dimethyladenosine transferase (EC 2.1.1.-) (... | 28 | 8.5 |
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>KSGA_SILPO (Q5LQN0) Dimethyladenosine transferase (EC 2.1.1.-)| (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase) (High level kasugamycin resistance protein ksgA) (Kasugamycin dimethyltransferase) Length = 279 Score = 27.7 bits (60), Expect = 8.5 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = +3 Query: 36 VVSFVPLHVDPEPSPSPSLVNTTTIPGP*FCNARAVDFRRVIAEAVKGRKE 188 V+S P P P S ++V+ T +P P F A A RV+A A R++ Sbjct: 185 VMSLPPEAFTPPPKVSSAVVHLTALPEPRF-PADAAILSRVVAAAFNQRRK 234 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,803,329 Number of Sequences: 219361 Number of extensions: 490632 Number of successful extensions: 2006 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1898 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1998 length of database: 80,573,946 effective HSP length: 46 effective length of database: 70,483,340 effective search space used: 1691600160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)