>R13L3_ARATH (Q9STE7) Putative disease resistance RPP13-like protein 3|
          Length = 847

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 28/75 (37%), Positives = 41/75 (54%)
 Frame = +1

Query: 163 GSVLGKLGVMLSNEYKLLKGVRDDIQFLKDELEAMHKFLVTMANVEEPHEQDKLRADAVR 342
           G VL K+G  L NE   L GV+DD++ LK EL  +H +L  +   E   E  K     V 
Sbjct: 7   GFVLNKIGGYLINEVLALMGVKDDLEELKTELTCIHGYLKDVEAREREDEVSKEWTKLVL 66

Query: 343 DLSYVMEDKIDKFMV 387
           D++Y +ED +D + +
Sbjct: 67  DIAYDIEDVLDTYFL 81

>R13L2_ARATH (Q9STE5) Putative disease resistance RPP13-like protein 2|
          Length = 847

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 23/77 (29%), Positives = 42/77 (54%)
 Frame = +1

Query: 169 VLGKLGVMLSNEYKLLKGVRDDIQFLKDELEAMHKFLVTMANVEEPHEQDKLRADAVRDL 348
           V+GK+   L  E  +L GV+DD++ LK EL  +  +L  +   ++  E  K     V D+
Sbjct: 9   VVGKIDNYLIEEAPMLIGVKDDLEELKTELTCIQVYLKNVEVCDKEDEVSKEWTKLVLDI 68

Query: 349 SYVMEDKIDKFMVLVRR 399
           +Y +ED +D + + + +
Sbjct: 69  AYDVEDVLDTYFLKLEK 85

>DRL4_ARATH (Q9SX38) Putative disease resistance protein At1g50180|
          Length = 839

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = +1

Query: 178 KLGVMLSNEYKLLKGVRDDIQFLKDELEAMHKFLVTMANVEEPHEQDKLR--ADAVRDLS 351
           KLG +L  E   L G+ D ++ L+DEL+ ++ FL      E+ HE +++R     +R+ S
Sbjct: 12  KLGQLLLEEPLFLFGIGDQVKQLQDELKRLNCFLKDAD--EKQHESERVRNWVAGIREAS 69

Query: 352 YVMEDKIDKFMV 387
           Y  ED ++ F +
Sbjct: 70  YDAEDILEAFFL 81

>RX24L_ARATH (Q9C646) Probable disease resistance protein RXW24L|
          Length = 899

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 22/70 (31%), Positives = 33/70 (47%)
 Frame = +1

Query: 178 KLGVMLSNEYKLLKGVRDDIQFLKDELEAMHKFLVTMANVEEPHEQDKLRADAVRDLSYV 357
           KL   LS EY   KGV D +  LK  L  +  FL      +   E  +   + ++D+ Y 
Sbjct: 10  KLWDRLSQEYDQFKGVEDQVTELKSNLNLLKSFLKDADAKKHISEMVRHCVEEIKDIVYD 69

Query: 358 MEDKIDKFMV 387
            ED I+ F++
Sbjct: 70  TEDIIETFIL 79

>DRL13_ARATH (Q9XIF0) Putative disease resistance protein At1g59780|
          Length = 906

 Score = 36.2 bits (82), Expect = 0.046
 Identities = 19/70 (27%), Positives = 39/70 (55%)
 Frame = +1

Query: 178 KLGVMLSNEYKLLKGVRDDIQFLKDELEAMHKFLVTMANVEEPHEQDKLRADAVRDLSYV 357
           KL  +LS EY+  +GV + I  L+D+L+ +  FL      ++     +   + +++++Y 
Sbjct: 17  KLWKLLSQEYERFQGVEEQITELRDDLKMLMAFLSDADAKKQTRALARNCLEEIKEITYD 76

Query: 358 MEDKIDKFMV 387
            ED I+ F++
Sbjct: 77  AEDIIEIFLL 86

>RPM1_ARATH (Q39214) Disease resistance protein RPM1 (Resistance to Pseudomonas|
           syringae protein 3)
          Length = 926

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 12/106 (11%)
 Frame = +1

Query: 172 LGKLGVMLSNEYKLLKGVRDDIQFLKDELEAMHKFLVTMANVEEPHEQDKLRADAV---- 339
           +G++  +L NE  LL GV  +I  +K EL  M  FL      E+ H+     +       
Sbjct: 10  IGRILSVLENETLLLSGVHGEIDKMKKELLIMKSFL------EDTHKHGGNGSTTTTTQL 63

Query: 340 --------RDLSYVMEDKIDKFMVLVRREPSSKPDSFMELCRKAWR 453
                   RDL+Y +ED +D+F   +    S         C K WR
Sbjct: 64  FQTFVANTRDLAYQIEDILDEFGYHIHGYRS---------CAKIWR 100

>ZN575_HUMAN (Q86XF7) Zinc finger protein 575|
          Length = 245

 Score = 32.7 bits (73), Expect = 0.51
 Identities = 36/137 (26%), Positives = 46/137 (33%), Gaps = 6/137 (4%)
 Frame = -2

Query: 430 P*SYLAWNLAHGGRAP*TCRFCPP*HTTGPAQRRHEACLAHEVPPHSPS*RGICAWLPAR 251
           P    A  L H G  P  C  CP           H + LA  +  H+P+    C   P  
Sbjct: 103 PSKLAAHRLTHSGARPHPCPHCPK-------SFGHRSKLAAHLWTHAPTRPYPCPDCP-- 153

Query: 250 P*ETGCHHEHP*AACIHCST*HPTSPRRNPWPRWLRSQKIPQPLVAAHSNFSPATA---- 83
             ++ C+   P     H  T H T  R  P P   ++   P  L A      P TA    
Sbjct: 154 --KSFCY---PSKLAAHRHTHHATDARPYPCPHCPKAFSFPSKLAAHRLCHDPPTAPGSQ 208

Query: 82  --AWVWCGGWKEGRGGR 38
             AW  C    +  G R
Sbjct: 209 ATAWHRCSSCGQAFGQR 225

>ZN575_MOUSE (Q3TXZ1) Zinc finger protein 575|
          Length = 239

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 31/116 (26%), Positives = 41/116 (35%)
 Frame = -2

Query: 430 P*SYLAWNLAHGGRAP*TCRFCPP*HTTGPAQRRHEACLAHEVPPHSPS*RGICAWLPAR 251
           P    A  L H G  P +C  C       P    H + LA  +  H+P+    C   P  
Sbjct: 97  PSKLAAHRLTHSGARPHSCPHC-------PKAFGHRSKLAAHLWTHAPARPYPCPDCP-- 147

Query: 250 P*ETGCHHEHP*AACIHCST*HPTSPRRNPWPRWLRSQKIPQPLVAAHSNFSPATA 83
             ++ C   +P     H  T H T  R  P P   ++   P  L A      P TA
Sbjct: 148 --KSFC---YPSKLAAHRHTHHATDARPYPCPHCPKAFSFPSKLAAHRLCHDPPTA 198

>TR19L_HUMAN (Q969Z4) Tumor necrosis factor receptor superfamily member 19L|
           precursor (Receptor expressed in lymphoid tissues)
          Length = 430

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +2

Query: 263 PCTNSSSRWRMWRNLMSKTSFVP--TLCGTCRMLWRTKSTSSWCSSAVSQVPSQIASWSF 436
           PC    +R  +WR L ++       TLCG C   W       W    V +VP Q  SW+ 
Sbjct: 64  PC-QPHARCSLWRRLEAQVGMATRDTLCGDCWPGW----FGPW---GVPRVPCQPCSWAP 115

Query: 437 AEKHGEDQ 460
              HG D+
Sbjct: 116 LGTHGCDE 123

>TERT_HUMAN (O14746) Telomerase reverse transcriptase (EC 2.7.7.49) (Telomerase|
           catalytic subunit) (HEST2) (Telomerase-associated
           protein 2) (TP2)
          Length = 1132

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 9/61 (14%)
 Frame = -2

Query: 313 AHEVPPHSPS*RGICAWLPARP*E---------TGCHHEHP*AACIHCST*HPTSPRRNP 161
           AH      PS RG C   PARP E         +G  H HP     H +    TS    P
Sbjct: 257 AHPGRTRGPSDRGFCVVSPARPAEEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRP 316

Query: 160 W 158
           W
Sbjct: 317 W 317

>ZN575_MACFA (Q9GM03) Zinc finger protein 575|
          Length = 260

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 31/116 (26%), Positives = 40/116 (34%)
 Frame = -2

Query: 430 P*SYLAWNLAHGGRAP*TCRFCPP*HTTGPAQRRHEACLAHEVPPHSPS*RGICAWLPAR 251
           P    A  L H G  P  C  C       P    H + LA  +  H+P+    C   P  
Sbjct: 118 PSKLAAHRLTHSGARPHPCPHC-------PKAFGHRSKLAAHLWTHAPTRPYPCPDCP-- 168

Query: 250 P*ETGCHHEHP*AACIHCST*HPTSPRRNPWPRWLRSQKIPQPLVAAHSNFSPATA 83
             ++ C   +P     H  T H T  R  P P   ++   P  L A      P TA
Sbjct: 169 --KSFC---YPSKLAAHRHTHHATDARPYPCPHCPKAFSFPSKLAAHRLCHDPPTA 219

>RAD50_PYRAB (Q9UZC8) DNA double-strand break repair rad50 ATPase|
          Length = 880

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
 Frame = +1

Query: 202 EYKLLKGVRDD----IQFLKDELEAMHKFLVTMANVEEPHEQDKLRADAVRDLSYVMEDK 369
           EY+ LKG RD+    ++ L+ EL      L  +  V +  E+ K RA+ +R+    +E +
Sbjct: 298 EYRKLKGFRDEYESKLRRLEKELSKWESELKAIEEVIKEGEKKKERAEEIREKLSEIEKR 357

Query: 370 IDKFMVLVRREPSSK 414
           +++    V     +K
Sbjct: 358 LEELKPYVEELEDAK 372

>Y1632_AQUAE (O67554) Hypothetical UPF0069 protein aq_1632|
          Length = 374

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 178 KLGVMLSNEYKLLKGVRDDIQFLKDELEAM 267
           K G  L+N+  +LKG+ DD + LK  LE +
Sbjct: 231 KTGTTLTNQTPILKGINDDFETLKTLLEEL 260

>RR3_MESVI (Q9MUU2) Chloroplast 30S ribosomal protein S3|
          Length = 213

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 18/67 (26%), Positives = 33/67 (49%)
 Frame = +1

Query: 124 AEEFFVSAATGAMGSVLGKLGVMLSNEYKLLKGVRDDIQFLKDELEAMHKFLVTMANVEE 303
           A++  +   T   G V+G+ G          KG+ + I+ L+D+L    KF +T+  ++E
Sbjct: 61  ADQVEIEIYTARPGLVVGRTG----------KGIENLIRDLQDKLRNKRKFRITITYLQE 110

Query: 304 PHEQDKL 324
           P  +  L
Sbjct: 111 PDLESTL 117

>KTN1_VULVU (O97961) Kinectin|
          Length = 1330

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +1

Query: 193  LSNEYKLLKGVRDDIQFLKDELEAMHKFLVTMANVEEPHEQ 315
            LS++ KLL+ V+D+ +  K E+E + +     A+   PHE+
Sbjct: 956  LSSKIKLLQEVQDENKLFKSEIEQLKQCNYQQASSFPPHEE 996

>GYRA_BACSU (P05653) DNA gyrase subunit A (EC 5.99.1.3)|
          Length = 821

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 11/57 (19%), Positives = 33/57 (57%)
 Frame = +1

Query: 169 VLGKLGVMLSNEYKLLKGVRDDIQFLKDELEAMHKFLVTMANVEEPHEQDKLRADAV 339
           ++ +L  +L+NEYK+L+ +R+++  +K+      +  +  + +E   ++D +  + +
Sbjct: 450 LIAELKDILANEYKVLEIIREELTEIKERFNDERRTEIVTSGLETIEDEDLIERENI 506

>ZN563_HUMAN (Q8TA94) Zinc finger protein 563|
          Length = 476

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -2

Query: 424 SYLAWNLAHGGRAP*TCRFCPP*HTTGPAQRRHEACLAHEVP 299
           SY+     H G  P TC+ C    +   + RRHE   + E P
Sbjct: 267 SYIRHERTHTGEKPYTCKQCGKAFSVSSSLRRHETTHSAEKP 308

>LMNA_PIG (Q3ZD69) Lamin-A/C|
          Length = 664

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 16/124 (12%)
 Frame = +1

Query: 100 SLSEQRLMAEEFF-VSAATGAMGSVLGKLGVMLSNEYKLLKGVRDDIQFLKDELEAMHKF 276
           +LSE+R +  E   +      + + LG+    L +E        + +Q LK+EL+     
Sbjct: 151 ALSEKRTLEGELHDLRGQVAKLEAALGEAKKQLQDEMLRRVDAENRLQTLKEELDFQKNI 210

Query: 277 ---------------LVTMANVEEPHEQDKLRADAVRDLSYVMEDKIDKFMVLVRREPSS 411
                          LV + N ++   + +L ADA++DL    ED+++++   + +  S+
Sbjct: 211 YSEELRETKRRHETRLVEIDNGKQREFESRL-ADALQDLRAQHEDQVEQYKKELEKTYSA 269

Query: 412 KPDS 423
           K D+
Sbjct: 270 KLDN 273

>SLP2_DROME (P32031) Fork head domain transcription factor slp2 (Sloppy paired|
           locus protein 2)
          Length = 445

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = -3

Query: 387 HHELVDFVLHNIRQVPHSVGTKLVLLMRFLHIRHRDEEF 271
           HH L     H+  Q PH VG  L  LM+     H    F
Sbjct: 24  HHPLPPTTHHSALQSPHPVGLNLTNLMKMARTPHLKSSF 62

>ZN570_HUMAN (Q96NI8) Zinc finger protein 570|
          Length = 536

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -2

Query: 145 RSQKIPQPLVAAHSNFSPATAAWVWCGGWKEGRGGRSEGCFGEE 14
           +SQKI + L + +  +S     W  C G+ E + G  + CF EE
Sbjct: 107 QSQKIIETLTSYNLEYSSLREEWK-CEGYFERQPGNQKACFKEE 149

>MPA5A_LOLPR (Q40240) Major pollen allergen Lol p 5a precursor (Lol p Va) (Lol p|
           Ib)
          Length = 308

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 97  SPATAAWVWCGGWKEGRGGRSEGCFGEEK 11
           +PAT A    GGW+EG   R+E   G ++
Sbjct: 37  TPATPAATPAGGWREGDDRRAEAAGGRQR 65


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.132    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,650,453
Number of Sequences: 219361
Number of extensions: 1471168
Number of successful extensions: 5854
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5846
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)