ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl46g03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC008484.7| Homo sapiens chromosome 5 clone CTC-412D23, compl... 46 0.10
2gb|AC096768.3| Homo sapiens BAC clone RP11-722P15 from 4, comple... 46 0.10
3gb|AC091986.3| Homo sapiens chromosome 5 clone RP11-68K1, comple... 46 0.10
4gb|AC010267.7| Homo sapiens chromosome 5 clone CTC-472C24, compl... 46 0.10
5gb|AC026431.3|AC026431 Homo sapiens chromosome 5 clone CTD-2222F... 46 0.10
6ref|XM_811655.1| Trypanosoma cruzi strain CL Brener hypothetical... 44 0.41
7ref|XM_813820.1| Trypanosoma cruzi strain CL Brener hypothetical... 44 0.41
8emb|BX571940.12| Zebrafish DNA sequence from clone DKEY-171N3 in... 44 0.41
9dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
10gb|AC169087.3| Gallus gallus BAC clone CH261-119D18 from chromos... 42 1.6
11gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
12emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.6
13gb|M30735.1|HSBGENA Bovine herpesvirus type 1, left end of genome 42 1.6
14ref|XM_464994.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
15gb|AF182811.1| Mus musculus asialoglycoprotein receptor major su... 40 6.5
16gb|U80030.1| Caenorhabditis elegans cosmid K12D9, complete sequence 40 6.5
17gb|AC138896.2| Homo sapiens chromosome 16 clone RP11-455M1, comp... 40 6.5
18ref|XM_747995.1| Aspergillus fumigatus Af293 nonribosomal peptid... 40 6.5
19gb|AC145285.2| Homo sapiens chromosome 16 clone RP11-1348G14, co... 40 6.5
20gb|AC138894.2| Homo sapiens chromosome 16 clone RP11-435I10, com... 40 6.5
21gb|AC138824.2| Homo sapiens chromosome 16 clone RP11-1119F12, co... 40 6.5
22gb|AC002544.1|HUAC002544 Homo sapiens Chromosome 16 BAC clone CI... 40 6.5
23gb|AC122338.2| Mus musculus BAC clone RP23-353I2 from chromosome... 40 6.5
24gb|AC124463.2| Mus musculus BAC clone RP24-152K14 from chromosom... 40 6.5
25emb|CR933541.6| Mouse DNA sequence from clone DN-97M20 on chromo... 40 6.5
26gb|AC026454.5| Homo sapiens chromosome 16 clone CTD-2597E15, com... 40 6.5
27emb|BX927157.1| Corynebacterium glutamicum ATCC 13032, IS finger... 40 6.5
28emb|AL596185.12| Mouse DNA sequence from clone RP23-172M21 on ch... 40 6.5
29gb|AC127453.2| Homo sapiens chromosome 16 clone CTA-115H5, compl... 40 6.5
30gb|AC092052.2| Homo sapiens chromosome 3 clone RP11-329N16, comp... 40 6.5
31ref|XM_497491.2| PREDICTED: Homo sapiens similar to Hsp90 co-cha... 40 6.5
32ref|XM_930001.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 6.5
33gb|AC163646.2| Mus musculus BAC clone RP23-207D1 from chromosome... 40 6.5
34gb|AC008956.8| Homo sapiens chromosome 16 clone CTD-2343L5, comp... 40 6.5
35dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
36gb|AC138934.3| Homo sapiens chromosome 16 clone RP11-685O4, comp... 40 6.5
37gb|AC135783.2| Homo sapiens chromosome 16 clone CTD-2555L18, com... 40 6.5
38dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 40 6.5
39gb|AC116346.2| Homo sapiens chromosome 16 clone RP11-24N18, comp... 40 6.5
40gb|AC026956.20| Homo sapiens chromosome 15, clone RP11-597K23, c... 40 6.5
41gb|AC133912.3| Homo sapiens chromosome 16 clone CTC-506N3, compl... 40 6.5
42dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
43dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
44emb|AL954131.8| Mouse DNA sequence from clone RP23-32H12 on chro... 40 6.5 
>gb|AC008484.7| Homo sapiens chromosome 5 clone CTC-412D23, complete sequence
          Length = 59451

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 52   cctccttccaaccaccacaccac 74
            |||||||||||||||||||||||
Sbjct: 1569 cctccttccaaccaccacaccac 1591
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>gb|AC096768.3| Homo sapiens BAC clone RP11-722P15 from 4, complete sequence
          Length = 180430

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 57   ttccaaccaccacaccacaccca 79
            |||||||||||||||||||||||
Sbjct: 4586 ttccaaccaccacaccacaccca 4564
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>gb|AC091986.3| Homo sapiens chromosome 5 clone RP11-68K1, complete sequence
          Length = 160760

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 52     cctccttccaaccaccacaccac 74
              |||||||||||||||||||||||
Sbjct: 134210 cctccttccaaccaccacaccac 134188
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>gb|AC010267.7| Homo sapiens chromosome 5 clone CTC-472C24, complete sequence
          Length = 186787

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 52     cctccttccaaccaccacaccac 74
              |||||||||||||||||||||||
Sbjct: 143886 cctccttccaaccaccacaccac 143908
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>gb|AC026431.3|AC026431 Homo sapiens chromosome 5 clone CTD-2222F6, complete sequence
          Length = 143080

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 52    cctccttccaaccaccacaccac 74
             |||||||||||||||||||||||
Sbjct: 43054 cctccttccaaccaccacaccac 43032
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>ref|XM_811655.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053511821.170) partial mRNA
          Length = 1473

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 269 acaaattcctcgtcacgatggc 290
           ||||||||||||||||||||||
Sbjct: 487 acaaattcctcgtcacgatggc 466
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>ref|XM_813820.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053510533.190) partial mRNA
          Length = 1473

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 269 acaaattcctcgtcacgatggc 290
           ||||||||||||||||||||||
Sbjct: 487 acaaattcctcgtcacgatggc 466
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>emb|BX571940.12| Zebrafish DNA sequence from clone DKEY-171N3 in linkage group 14,
             complete sequence
          Length = 179550

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 428   tggagctttgcagaaaagcatg 449
             ||||||||||||||||||||||
Sbjct: 97482 tggagctttgcagaaaagcatg 97503
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 406      agttccaagccagatagcttc 426
                |||||||||||||||||||||
Sbjct: 23168027 agttccaagccagatagcttc 23168007
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>gb|AC169087.3| Gallus gallus BAC clone CH261-119D18 from chromosome ul, complete
             sequence
          Length = 225652

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 432   gctttgcagaaaagcatggag 452
             |||||||||||||||||||||
Sbjct: 64239 gctttgcagaaaagcatggag 64259
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 406      agttccaagccagatagcttc 426
                |||||||||||||||||||||
Sbjct: 23096218 agttccaagccagatagcttc 23096198
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>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 135323

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 406   agttccaagccagatagcttc 426
             |||||||||||||||||||||
Sbjct: 10370 agttccaagccagatagcttc 10390
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>gb|M30735.1|HSBGENA Bovine herpesvirus type 1, left end of genome
          Length = 679

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 33  tcgctcctcccccctcgcccctcct 57
           |||||||||||||||||| ||||||
Sbjct: 584 tcgctcctcccccctcgctcctcct 608
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>ref|XM_464994.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 336

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 417 agatagcttcatggagctttgcag 440
           ||||||||||||||| ||||||||
Sbjct: 265 agatagcttcatggaactttgcag 242
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>gb|AF182811.1| Mus musculus asialoglycoprotein receptor major subunit (Asgr1) gene,
            complete cds
          Length = 7590

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 37   tcctcccccctcgcccctccttcc 60
            |||||||||||| |||||||||||
Sbjct: 5999 tcctcccccctctcccctccttcc 5976
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>gb|U80030.1| Caenorhabditis elegans cosmid K12D9, complete sequence
          Length = 36254

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   gccgacgctgtgcgggacct 347
             ||||||||||||||||||||
Sbjct: 30227 gccgacgctgtgcgggacct 30208
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>gb|AC138896.2| Homo sapiens chromosome 16 clone RP11-455M1, complete sequence
          Length = 158271

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   tcaaggacgagctggaagcc 264
             ||||||||||||||||||||
Sbjct: 70994 tcaaggacgagctggaagcc 70975
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>ref|XM_747995.1| Aspergillus fumigatus Af293 nonribosomal peptide synthase NRPS
            (Afu1g17200) partial mRNA
          Length = 14292

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 324  tcgtgccgacgctgtgcggg 343
            ||||||||||||||||||||
Sbjct: 4592 tcgtgccgacgctgtgcggg 4573
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>gb|AC145285.2| Homo sapiens chromosome 16 clone RP11-1348G14, complete sequence
          Length = 219165

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   tcaaggacgagctggaagcc 264
             ||||||||||||||||||||
Sbjct: 92434 tcaaggacgagctggaagcc 92415
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>gb|AC138894.2| Homo sapiens chromosome 16 clone RP11-435I10, complete sequence
          Length = 182289

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 245    tcaaggacgagctggaagcc 264
              ||||||||||||||||||||
Sbjct: 115329 tcaaggacgagctggaagcc 115310
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>gb|AC138824.2| Homo sapiens chromosome 16 clone RP11-1119F12, complete sequence
          Length = 134444

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   tcaaggacgagctggaagcc 264
             ||||||||||||||||||||
Sbjct: 67014 tcaaggacgagctggaagcc 66995
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>gb|AC002544.1|HUAC002544 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-761H5, complete
             sequence
          Length = 156641

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   tcaaggacgagctggaagcc 264
             ||||||||||||||||||||
Sbjct: 67526 tcaaggacgagctggaagcc 67545
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>gb|AC122338.2| Mus musculus BAC clone RP23-353I2 from chromosome 6, complete sequence
          Length = 181128

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 426   catggagctttgcagaaaag 445
             ||||||||||||||||||||
Sbjct: 77582 catggagctttgcagaaaag 77601
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>gb|AC124463.2| Mus musculus BAC clone RP24-152K14 from chromosome 1, complete sequence
          Length = 153199

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gagcagcgactaatggctga 128
             ||||||||||||||||||||
Sbjct: 34606 gagcagcgactaatggctga 34587
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>emb|CR933541.6| Mouse DNA sequence from clone DN-97M20 on chromosome 11, complete
              sequence
          Length = 176646

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 37     tcctcccccctcgcccctccttcc 60
              |||||||||||| |||||||||||
Sbjct: 161057 tcctcccccctctcccctccttcc 161034
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>gb|AC026454.5| Homo sapiens chromosome 16 clone CTD-2597E15, complete sequence
          Length = 136331

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    tcaaggacgagctggaagcc 264
              ||||||||||||||||||||
Sbjct: 129459 tcaaggacgagctggaagcc 129478
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>emb|BX927157.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5,
             complete genome; segment 10/10
          Length = 140057

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 251   acgagctggaagccatgcacaaat 274
             |||||||| |||||||||||||||
Sbjct: 78826 acgagctgcaagccatgcacaaat 78803
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>emb|AL596185.12| Mouse DNA sequence from clone RP23-172M21 on chromosome 11 Contains the
              5' end of the Centb1 gene for centaurin beta 1, the gene
              for a novel protein similar to protein phosphatase 1
              regulatory (inhibitor) subunit 2 Ppp1r2, a novel gene, the
              Gps2 gene for G protein pathway suppressor 2, the Eif5a
              gene for eukaryotic translation initiation factor 5A, the
              Ybx2 gene for Y box protein 2, the Slc2a4 gene for solute
              carrier family 2 (facilitated glucose transporter) member
              4, a non-muscle cofilin 1 (Cfl1) pseudogene, the Cldn7 gene
              for claudin 7, the Rai12 gene for retinoic acid induced 12,
              the Dullard gene for Dullard homolog (Xenopus laevis)
              (novel NLI interacting factor-like phosphatase), the gene
              for novel PHD-finger protein JUNE1, the Dvl2 gene for
              dishevelled 2 dsh homolog (Drosophila), the Acadvl gene for
              acyl-Coenzyme A dehydrogenase very long chain, the Dlgh4
              gene for discs large homolog 4 (Drosophila), the Asgr1 and
              Asgr2 genes for asialoglycoprotein receptor 1 and 2, a
              ribosomal protein L26 (Rpl26) pseudogene, the 5' end of the
              Mgl2 gene for macrophage galactose N-acetyl-galactosamine
              specific lectin 2 and nine CpG islands, complete sequence
          Length = 248203

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 37     tcctcccccctcgcccctccttcc 60
              |||||||||||| |||||||||||
Sbjct: 168221 tcctcccccctctcccctccttcc 168198
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>gb|AC127453.2| Homo sapiens chromosome 16 clone CTA-115H5, complete sequence
          Length = 63736

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   tcaaggacgagctggaagcc 264
             ||||||||||||||||||||
Sbjct: 41765 tcaaggacgagctggaagcc 41784
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>gb|AC092052.2| Homo sapiens chromosome 3 clone RP11-329N16, complete sequence
          Length = 203204

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    atgttgagcaatgaatacaa 209
              ||||||||||||||||||||
Sbjct: 141185 atgttgagcaatgaatacaa 141166
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>ref|XM_497491.2| PREDICTED: Homo sapiens similar to Hsp90 co-chaperone Cdc37 (Hsp90
           chaperone protein kinase-targeting subunit) (p50Cdc37)
           (LOC441752), mRNA
          Length = 498

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 245 tcaaggacgagctggaagcc 264
           ||||||||||||||||||||
Sbjct: 437 tcaaggacgagctggaagcc 456
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>ref|XM_930001.1| PREDICTED: Homo sapiens hypothetical protein LOC647015 (LOC647015),
           mRNA
          Length = 722

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 245 tcaaggacgagctggaagcc 264
           ||||||||||||||||||||
Sbjct: 240 tcaaggacgagctggaagcc 259
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>gb|AC163646.2| Mus musculus BAC clone RP23-207D1 from chromosome 14, complete sequence
          Length = 185289

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 425   tcatggagctttgcagaaaa 444
             ||||||||||||||||||||
Sbjct: 24159 tcatggagctttgcagaaaa 24178
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>gb|AC008956.8| Homo sapiens chromosome 16 clone CTD-2343L5, complete sequence
          Length = 110129

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 245  tcaaggacgagctggaagcc 264
            ||||||||||||||||||||
Sbjct: 2917 tcaaggacgagctggaagcc 2936
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 417      agatagcttcatggagctttgcag 440
                ||||||||||||||| ||||||||
Sbjct: 10820781 agatagcttcatggaactttgcag 10820804
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>gb|AC138934.3| Homo sapiens chromosome 16 clone RP11-685O4, complete sequence
          Length = 169127

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   tcaaggacgagctggaagcc 264
             ||||||||||||||||||||
Sbjct: 55818 tcaaggacgagctggaagcc 55837
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>gb|AC135783.2| Homo sapiens chromosome 16 clone CTD-2555L18, complete sequence
          Length = 224150

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    tcaaggacgagctggaagcc 264
              ||||||||||||||||||||
Sbjct: 180594 tcaaggacgagctggaagcc 180613
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>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 251     acgagctggaagccatgcacaaat 274
               |||||||| |||||||||||||||
Sbjct: 3248170 acgagctgcaagccatgcacaaat 3248147
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>gb|AC116346.2| Homo sapiens chromosome 16 clone RP11-24N18, complete sequence
          Length = 160521

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   tcaaggacgagctggaagcc 264
             ||||||||||||||||||||
Sbjct: 28536 tcaaggacgagctggaagcc 28517
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>gb|AC026956.20| Homo sapiens chromosome 15, clone RP11-597K23, complete sequence
          Length = 215520

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 36     ctcctcccccctcgcccctccttc 59
              |||||||||||| |||||||||||
Sbjct: 116448 ctcctccccccttgcccctccttc 116471
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>gb|AC133912.3| Homo sapiens chromosome 16 clone CTC-506N3, complete sequence
          Length = 128703

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   tcaaggacgagctggaagcc 264
             ||||||||||||||||||||
Sbjct: 90552 tcaaggacgagctggaagcc 90533
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>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1756_H07
          Length = 217205

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 417   agatagcttcatggagctttgcag 440
             ||||||||||||||| ||||||||
Sbjct: 26980 agatagcttcatggaactttgcag 27003
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>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1115_D03
          Length = 169378

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 417    agatagcttcatggagctttgcag 440
              ||||||||||||||| ||||||||
Sbjct: 160262 agatagcttcatggaactttgcag 160285
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>emb|AL954131.8| Mouse DNA sequence from clone RP23-32H12 on chromosome 2, complete
              sequence
          Length = 162456

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    ttggggaagttgggtgtcat 191
              ||||||||||||||||||||
Sbjct: 116343 ttggggaagttgggtgtcat 116362


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,322,229
Number of Sequences: 3902068
Number of extensions: 4322229
Number of successful extensions: 104657
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104455
Number of HSP's gapped (non-prelim): 202
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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