ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl46f10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC144759.11| Medicago truncatula clone mth2-15b21, complete s... 46 0.088
2gb|AC123596.13| Medicago truncatula clone mth1-17n5, complete se... 46 0.088
3emb|CT025839.2| Medicago truncatula chromosome 5 clone mth4-19c2... 46 0.088
4gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, co... 44 0.35
5gb|AC132140.3| Mus musculus BAC clone RP23-82C19 from chromosome... 44 0.35
6gb|AC122434.2| Mus musculus BAC clone RP24-198G2 from chromosome... 44 0.35
7gb|AY138395.1| Stereum sanguinolentum chitin synthase 2 (CHS2) g... 42 1.4
8emb|Z97353.3|HS90L6 Human DNA sequence from clone RP1-90L6 on ch... 42 1.4
9gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.4
10gb|AC145557.3| Mus musculus BAC clone RP23-313I19 from chromosom... 40 5.4
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.4
12gb|AC140193.3| Mus musculus BAC clone RP23-247C12 from chromosom... 40 5.4
13ref|XM_850698.1| PREDICTED: Canis familiaris similar to N-myrist... 40 5.4
14gb|U58974.2|MMU58974 Mus musculus proto-oncogene Frat1 (Frat1) m... 40 5.4
15emb|AL356294.28| Human DNA sequence from clone RP11-49F20 on chr... 40 5.4
16emb|AL162497.20| Human DNA sequence from clone RP11-313L9 on chr... 40 5.4
17emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.4
18emb|BX640429.1| Bordetella parapertussis strain 12822, complete ... 40 5.4
19emb|AJ575648.1|STH575648 Streptomyces thioluteus aureothin biosy... 40 5.4
20gb|AC113347.2| Homo sapiens chromosome 5 clone CTD-2533K21, comp... 40 5.4
21gb|AC012176.8| Homo sapiens chromosome 16 clone RP11-206F18, com... 40 5.4
22ref|NM_003749.2| Homo sapiens insulin receptor substrate 2 (IRS2... 40 5.4
23gb|AF312225.1|AF312225 Homo sapiens chromosome 2 map 2q37.1, com... 40 5.4
24gb|AC008371.4| Drosophila melanogaster, chromosome 2L, region 21... 40 5.4
25gb|AF288517.1|AF288517 Homo sapiens mutant insulin receptor subs... 40 5.4
26gb|AF385933.1|AF385933 Homo sapiens insulin receptor substrate 2... 40 5.4
27gb|AF385932.1|AF385932 Homo sapiens insulin receptor substrate 2... 40 5.4
28dbj|AK015680.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 5.4
29dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
30gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
31gb|AC068134.5| Homo sapiens BAC clone RP11-762N20 from 2, comple... 40 5.4
32gb|AC018445.21| Homo sapiens chromosome 18, clone RP11-196B3, co... 40 5.4
33gb|AF322114.1|AF322114S1 Homo sapiens insulin receptor substrate... 40 5.4
34gb|AC027298.20|AC027298 Mus musculus 7 BAC RP23-266F22 (Roswell ... 40 5.4
35gb|AC117984.2| Homo sapiens chromosome 16 clone CTD-2503H21, com... 40 5.4
36gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 5.4
37emb|BX323551.8| Mouse DNA sequence from clone RP23-169N21 on chr... 40 5.4
38dbj|AK102918.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
39gb|AF148857.1|AF148857 Mus musculus FRAT3 (Frat3) mRNA, complete... 40 5.4
40gb|AF073310.1|AF073310 Homo sapiens insulin receptor substrate-2... 40 5.4
41gb|AE003590.3| Drosophila melanogaster chromosome 2L, section 1 ... 40 5.4
42gb|AC004274.1|AC004274 Drosophila melanogaster DNA sequence (P1 ... 40 5.4
43gb|AC131795.3| Mus musculus BAC clone RP24-490N11 from 10, compl... 40 5.4
44ref|NM_013788.1| Mus musculus paternally expressed 12 (Peg12), mRNA 40 5.4
45ref|NM_008043.2| Mus musculus frequently rearranged in advanced ... 40 5.4
46dbj|AB050954.1| Homo sapiens irs-2 gene for insulin receptor sub... 40 5.4 
>gb|AC144759.11| Medicago truncatula clone mth2-15b21, complete sequence
          Length = 124666

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 42    tcctcccccttcgcctcgtcgccgccg 68
             |||||||||| ||||||||||||||||
Sbjct: 48783 tcctccccctccgcctcgtcgccgccg 48757
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>gb|AC123596.13| Medicago truncatula clone mth1-17n5, complete sequence
          Length = 120055

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 42    tcctcccccttcgcctcgtcgccgccg 68
             |||||||||| ||||||||||||||||
Sbjct: 46124 tcctccccctccgcctcgtcgccgccg 46098
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>emb|CT025839.2| Medicago truncatula chromosome 5 clone mth4-19c21, COMPLETE SEQUENCE
          Length = 210117

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 42    tcctcccccttcgcctcgtcgccgccg 68
             |||||||||| ||||||||||||||||
Sbjct: 48788 tcctccccctccgcctcgtcgccgccg 48762
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>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence
          Length = 384518

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 110   cgcctcgtcgccgcccgcggccagcc 135
             ||||||||||||| ||||||||||||
Sbjct: 71239 cgcctcgtcgccgtccgcggccagcc 71214



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 110   cgcctcgtcgccgcccgcggccagcc 135
             ||||||||||||| ||||||||||||
Sbjct: 70888 cgcctcgtcgccgtccgcggccagcc 70863



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 110   cgcctcgtcgccgcccgcggccagcc 135
             ||||||||||||| ||||||||||||
Sbjct: 69784 cgcctcgtcgccgtccgcggccagcc 69759



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 110   cgcctcgtcgccgcccgcggccagcc 135
             ||||||||||||| ||||||||||||
Sbjct: 69433 cgcctcgtcgccgtccgcggccagcc 69408



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 110   cgcctcgtcgccgcccgcggccagcc 135
             ||||||||||||| ||||||||||||
Sbjct: 66991 cgcctcgtcgccgtccgcggccagcc 66966



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 111   gcctcgtcgccgcccgcggccagcc 135
             |||||||||||| ||||||||||||
Sbjct: 70653 gcctcgtcgccgtccgcggccagcc 70629



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 111   gcctcgtcgccgcccgcggccagcc 135
             |||||||||||| ||||||||||||
Sbjct: 67542 gcctcgtcgccgtccgcggccagcc 67518
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>gb|AC132140.3| Mus musculus BAC clone RP23-82C19 from chromosome 19, complete sequence
          Length = 278583

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 179    gtatgtattaccgcagaaaaag 200
              ||||||||||||||||||||||
Sbjct: 150759 gtatgtattaccgcagaaaaag 150780
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>gb|AC122434.2| Mus musculus BAC clone RP24-198G2 from chromosome 8, complete sequence
          Length = 168940

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 312   attattaactttcctttctact 333
             ||||||||||||||||||||||
Sbjct: 19715 attattaactttcctttctact 19694
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>gb|AY138395.1| Stereum sanguinolentum chitin synthase 2 (CHS2) gene, partial cds
          Length = 718

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 190 cgcagaaaaaggaatcgtccc 210
           |||||||||||||||||||||
Sbjct: 353 cgcagaaaaaggaatcgtccc 373
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>emb|Z97353.3|HS90L6 Human DNA sequence from clone RP1-90L6 on chromosome 22q11.21-11.23,
              complete sequence
          Length = 190837

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 319    actttcctttctactctgccc 339
              |||||||||||||||||||||
Sbjct: 162273 actttcctttctactctgccc 162293
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 111     gcctcgtcgccgcccgcggcc 131
               |||||||||||||||||||||
Sbjct: 3566908 gcctcgtcgccgcccgcggcc 3566888
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>gb|AC145557.3| Mus musculus BAC clone RP23-313I19 from chromosome 19, complete
             sequence
          Length = 226099

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 42    tcctcccccttcgcctcgtcgccg 65
             |||||||||| |||||||||||||
Sbjct: 75595 tcctccccctccgcctcgtcgccg 75618
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 53       cgcctcgtcgccgccggcga 72
                ||||||||||||||||||||
Sbjct: 12042696 cgcctcgtcgccgccggcga 12042677
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>gb|AC140193.3| Mus musculus BAC clone RP23-247C12 from chromosome 19, complete
            sequence
          Length = 173527

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 42   tcctcccccttcgcctcgtcgccg 65
            |||||||||| |||||||||||||
Sbjct: 2984 tcctccccctccgcctcgtcgccg 2961
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>ref|XM_850698.1| PREDICTED: Canis familiaris similar to N-myristoyltransferase 1,
            transcript variant 4 (LOC480494), mRNA
          Length = 1981

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 11   cagccctccccactcacctc 30
            ||||||||||||||||||||
Sbjct: 1209 cagccctccccactcacctc 1190
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>gb|U58974.2|MMU58974 Mus musculus proto-oncogene Frat1 (Frat1) mRNA, complete cds
          Length = 2464

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 42  tcctcccccttcgcctcgtcgccg 65
           |||||||||| |||||||||||||
Sbjct: 108 tcctccccctccgcctcgtcgccg 85
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>emb|AL356294.28| Human DNA sequence from clone RP11-49F20 on chromosome 13 Contains a
             glycogenin (GYG) pseudogene, complete sequence
          Length = 135345

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 270   tgttaccaaggagtgggaca 289
             ||||||||||||||||||||
Sbjct: 78936 tgttaccaaggagtgggaca 78917
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>emb|AL162497.20| Human DNA sequence from clone RP11-313L9 on chromosome 13 Contains a
              novel gene, the IRS2 gene for insulin receptor substrate 2
              and two CpG islands, complete sequence
          Length = 143409

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    tcgcctcgtcgccgcccgcg 128
              ||||||||||||||||||||
Sbjct: 125707 tcgcctcgtcgccgcccgcg 125726
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>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16
          Length = 348624

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 110    cgcctcgtcgccgcccgcggccag 133
              |||||||||||||| |||||||||
Sbjct: 261287 cgcctcgtcgccgcgcgcggccag 261264
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>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14
          Length = 344321

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 110    cgcctcgtcgccgcccgcggccag 133
              |||||||||||||| |||||||||
Sbjct: 206979 cgcctcgtcgccgcgcgcggccag 206956
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>emb|AJ575648.1|STH575648 Streptomyces thioluteus aureothin biosynthesis gene cluster
             (aurABCDEFGHI genes), strain HKI-22
          Length = 29132

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   cctcgtcgccgcccgcggcc 131
             ||||||||||||||||||||
Sbjct: 17274 cctcgtcgccgcccgcggcc 17293
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>gb|AC113347.2| Homo sapiens chromosome 5 clone CTD-2533K21, complete sequence
          Length = 128152

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 207   tcccgaccccatcaataatctttc 230
             |||| |||||||||||||||||||
Sbjct: 10320 tccccaccccatcaataatctttc 10297
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>gb|AC012176.8| Homo sapiens chromosome 16 clone RP11-206F18, complete sequence
          Length = 162224

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   tattaactttcctttctact 333
             ||||||||||||||||||||
Sbjct: 65009 tattaactttcctttctact 64990
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>ref|NM_003749.2| Homo sapiens insulin receptor substrate 2 (IRS2), mRNA
          Length = 7014

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 109 tcgcctcgtcgccgcccgcg 128
           ||||||||||||||||||||
Sbjct: 695 tcgcctcgtcgccgcccgcg 676
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>gb|AF312225.1|AF312225 Homo sapiens chromosome 2 map 2q37.1, complete sequence
          Length = 345102

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      gcgcctccagccctccccac 23
              ||||||||||||||||||||
Sbjct: 330435 gcgcctccagccctccccac 330454
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>gb|AC008371.4| Drosophila melanogaster, chromosome 2L, region 21D-21D, BAC clone
              BACR22C14, complete sequence
          Length = 163461

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    agccatggacgttgcccccg 151
              ||||||||||||||||||||
Sbjct: 101168 agccatggacgttgcccccg 101149
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>gb|AF288517.1|AF288517 Homo sapiens mutant insulin receptor substrate 2 (IRS2) gene,
           partial cds
          Length = 4283

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 109 tcgcctcgtcgccgcccgcg 128
           ||||||||||||||||||||
Sbjct: 319 tcgcctcgtcgccgcccgcg 300
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>gb|AF385933.1|AF385933 Homo sapiens insulin receptor substrate 2 insertion mutant (IRS2)
           gene, partial cds
          Length = 4286

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 109 tcgcctcgtcgccgcccgcg 128
           ||||||||||||||||||||
Sbjct: 322 tcgcctcgtcgccgcccgcg 303
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>gb|AF385932.1|AF385932 Homo sapiens insulin receptor substrate 2 insertion mutant (IRS2)
           gene, partial cds
          Length = 4289

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 109 tcgcctcgtcgccgcccgcg 128
           ||||||||||||||||||||
Sbjct: 325 tcgcctcgtcgccgcccgcg 306
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>dbj|AK015680.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930502J22 product:frequently rearranged
           in advanced T-cell lymphomas, full insert sequence
          Length = 1186

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 42  tcctcccccttcgcctcgtcgccg 65
           |||||||||| |||||||||||||
Sbjct: 187 tcctccccctccgcctcgtcgccg 164
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 53       cgcctcgtcgccgccggcga 72
                ||||||||||||||||||||
Sbjct: 12039459 cgcctcgtcgccgccggcga 12039440
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>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0052J20, complete sequence
          Length = 144969

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    cgcctcgtcgccgccggcga 72
             ||||||||||||||||||||
Sbjct: 63276 cgcctcgtcgccgccggcga 63257
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>gb|AC068134.5| Homo sapiens BAC clone RP11-762N20 from 2, complete sequence
          Length = 181068

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     gcgcctccagccctccccac 23
             ||||||||||||||||||||
Sbjct: 23334 gcgcctccagccctccccac 23353
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>gb|AC018445.21| Homo sapiens chromosome 18, clone RP11-196B3, complete sequence
          Length = 162265

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   ccccagcagacccctccggt 180
             ||||||||||||||||||||
Sbjct: 31004 ccccagcagacccctccggt 30985
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>gb|AF322114.1|AF322114S1 Homo sapiens insulin receptor substrate 2 (IRS2) gene, exon 1
          Length = 4283

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 109 tcgcctcgtcgccgcccgcg 128
           ||||||||||||||||||||
Sbjct: 319 tcgcctcgtcgccgcccgcg 300
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>gb|AC027298.20|AC027298 Mus musculus 7 BAC RP23-266F22 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 201467

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 42    tcctcccccttcgcctcgtcgccg 65
             |||||||||| |||||||||||||
Sbjct: 81125 tcctccccctccgcctcgtcgccg 81102
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>gb|AC117984.2| Homo sapiens chromosome 16 clone CTD-2503H21, complete sequence
          Length = 190454

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    tattaactttcctttctact 333
              ||||||||||||||||||||
Sbjct: 109921 tattaactttcctttctact 109940
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 46      cccccttcgcctcgtcgccg 65
               ||||||||||||||||||||
Sbjct: 1969540 cccccttcgcctcgtcgccg 1969559
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>emb|BX323551.8| Mouse DNA sequence from clone RP23-169N21 on chromosome 4, complete
             sequence
          Length = 59167

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   ctttcctttctactctgccc 339
             ||||||||||||||||||||
Sbjct: 32023 ctttcctttctactctgccc 32004
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>dbj|AK102918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114B10, full
            insert sequence
          Length = 2381

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   cgcctcgtcgccgccggcga 72
            ||||||||||||||||||||
Sbjct: 1340 cgcctcgtcgccgccggcga 1321
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>gb|AF148857.1|AF148857 Mus musculus FRAT3 (Frat3) mRNA, complete cds
          Length = 2639

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 42  tcctcccccttcgcctcgtcgccg 65
           |||||||||| |||||||||||||
Sbjct: 213 tcctccccctccgcctcgtcgccg 190
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>gb|AF073310.1|AF073310 Homo sapiens insulin receptor substrate-2 (IRS2) mRNA, complete cds
          Length = 6996

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 109 tcgcctcgtcgccgcccgcg 128
           ||||||||||||||||||||
Sbjct: 700 tcgcctcgtcgccgcccgcg 681
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>gb|AE003590.3| Drosophila melanogaster chromosome 2L, section 1 of 83 of the complete
              sequence
          Length = 305900

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    agccatggacgttgcccccg 151
              ||||||||||||||||||||
Sbjct: 277146 agccatggacgttgcccccg 277127
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>gb|AC004274.1|AC004274 Drosophila melanogaster DNA sequence (P1 DS07049 (D133)), complete
            sequence
          Length = 65196

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  agccatggacgttgcccccg 151
            ||||||||||||||||||||
Sbjct: 2608 agccatggacgttgcccccg 2627
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>gb|AC131795.3| Mus musculus BAC clone RP24-490N11 from 10, complete sequence
          Length = 181961

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 311    aattattaactttcctttct 330
              ||||||||||||||||||||
Sbjct: 124694 aattattaactttcctttct 124713
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>ref|NM_013788.1| Mus musculus paternally expressed 12 (Peg12), mRNA
          Length = 2639

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 42  tcctcccccttcgcctcgtcgccg 65
           |||||||||| |||||||||||||
Sbjct: 213 tcctccccctccgcctcgtcgccg 190
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>ref|NM_008043.2| Mus musculus frequently rearranged in advanced T-cell lymphomas
           (Frat1), mRNA
          Length = 2464

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 42  tcctcccccttcgcctcgtcgccg 65
           |||||||||| |||||||||||||
Sbjct: 108 tcctccccctccgcctcgtcgccg 85
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>dbj|AB050954.1| Homo sapiens irs-2 gene for insulin receptor substrate-2, partial cds
          Length = 2616

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 109  tcgcctcgtcgccgcccgcg 128
            ||||||||||||||||||||
Sbjct: 2580 tcgcctcgtcgccgcccgcg 2561


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,975,040
Number of Sequences: 3902068
Number of extensions: 2975040
Number of successful extensions: 61228
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60794
Number of HSP's gapped (non-prelim): 434
length of query: 406
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 384
effective length of database: 17,147,199,772
effective search space: 6584524712448
effective search space used: 6584524712448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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