ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl46e06 |
|---|---|
| Clone Library Name | barley_pub |
>RIR1_ARATH (Q9SJ20) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase R1 subunit) (AtRNR1) Length = 816 Score = 175 bits (443), Expect = 5e-44 Identities = 85/104 (81%), Positives = 89/104 (85%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 302 MYVVKRDGR ETVHFDKITARLKKLSYGLS +HCDPVLVAQKVCAGVYKGVTTSQLD Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSSDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60 Query: 303 XXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMYLH 434 +HPDYASLAAR+AVSNLHKNTKKSFSETIKDM+ H Sbjct: 61 AETAAAMTCNHPDYASLAARIAVSNLHKNTKKSFSETIKDMFYH 104
>RIR1_CAEEL (Q03604) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleotide reductase large chain) Length = 788 Score = 124 bits (311), Expect = 1e-28 Identities = 60/101 (59%), Positives = 73/101 (72%) Frame = +3 Query: 126 YVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXXX 305 YVVKRDGR E VHFDKIT+R++KLSYGL+ + DPV VA KV +G+YKGVTT +LD Sbjct: 8 YVVKRDGRKEDVHFDKITSRIQKLSYGLNMDFVDPVAVAIKVISGLYKGVTTVELDNLAA 67 Query: 306 XXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMY 428 HP+YA LAAR+AVSNLHK T K FSE +K ++ Sbjct: 68 ETAASMTTQHPEYALLAARIAVSNLHKKTNKVFSEVMKTLH 108
>RIR1_NEUCR (Q9UW15) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase large subunit) Length = 929 Score = 123 bits (309), Expect = 2e-28 Identities = 60/102 (58%), Positives = 70/102 (68%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 302 MYV KRDGR E V FDKITAR+ +L YGL H DPV + QKV +GVY GVTT+QLD Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTAQLDDLA 60 Query: 303 XXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMY 428 +HPDYA LAAR+AVSNLHK TKK +S I ++Y Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSLVISELY 102
>RIR1_DROME (P48591) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase M1 subunit) (Ribonucleotide reductase large chain) Length = 812 Score = 122 bits (307), Expect = 3e-28 Identities = 57/105 (54%), Positives = 74/105 (70%) Frame = +3 Query: 120 KMYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXX 299 K+YV+KRDGR E VHFDKIT+R++KL Y L+ + DPV + +V G+Y GVTT +LD Sbjct: 11 KLYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNL 70 Query: 300 XXXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMYLH 434 +HPDYA LAAR+AVSNLHK TKK+FS+ +D+Y H Sbjct: 71 AAEIAAGLTCNHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNH 115
>RIR1_VARV (P32984) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 771 Score = 122 bits (305), Expect = 5e-28 Identities = 56/102 (54%), Positives = 72/102 (70%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 302 M+V+KR+G E V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60 Query: 303 XXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMY 428 HPDYA LAAR+AVSNLHK TKK FSE +KD++ Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLF 102
>RIR1_YEAST (P21524) Ribonucleoside-diphosphate reductase large chain 1 (EC| 1.17.4.1) (Ribonucleotide reductase large subunit 1) (Ribonucleotide reductase R1 subunit 1) Length = 888 Score = 120 bits (301), Expect = 1e-27 Identities = 56/102 (54%), Positives = 71/102 (69%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 302 MYV KRDGR E V FDKITAR+ +L YGL +H D V V Q++ +GVY+GVTT +LD Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60 Query: 303 XXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMY 428 HPDYA+LAAR+A+SNLHK T K FS+ ++D+Y Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLY 102
>RIR1_VACCV (P12848) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 771 Score = 120 bits (301), Expect = 1e-27 Identities = 55/102 (53%), Positives = 72/102 (70%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 302 M+V+KR+G E V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60 Query: 303 XXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMY 428 HPDYA LAAR+AVSNLHK TKK FSE ++D++ Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLF 102
>RIR1_VACCC (P20503) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 771 Score = 120 bits (301), Expect = 1e-27 Identities = 55/102 (53%), Positives = 72/102 (70%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 302 M+V+KR+G E V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60 Query: 303 XXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMY 428 HPDYA LAAR+AVSNLHK TKK FSE ++D++ Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLF 102
>RIR1_VACCA (Q76RD8) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 771 Score = 120 bits (301), Expect = 1e-27 Identities = 55/102 (53%), Positives = 72/102 (70%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 302 M+V+KR+G E V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60 Query: 303 XXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMY 428 HPDYA LAAR+AVSNLHK TKK FSE ++D++ Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLF 102
>RIR1_MOUSE (P07742) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase M1 subunit) (Ribonucleotide reductase large chain) Length = 792 Score = 118 bits (296), Expect = 5e-27 Identities = 55/102 (53%), Positives = 70/102 (68%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 302 M+V+KRDGR E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60 Query: 303 XXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMY 428 HPDYA LAAR+AVSNLHK TKK FS+ ++D+Y Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLY 102
>RIR1_HUMAN (P23921) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase M1 subunit) (Ribonucleotide reductase large chain) Length = 792 Score = 118 bits (296), Expect = 5e-27 Identities = 55/102 (53%), Positives = 70/102 (68%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 302 M+V+KRDGR E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60 Query: 303 XXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMY 428 HPDYA LAAR+AVSNLHK TKK FS+ ++D+Y Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLY 102
>RIR1_SCHPO (P36602) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 811 Score = 117 bits (294), Expect = 9e-27 Identities = 56/102 (54%), Positives = 69/102 (67%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 302 M+V KRDGR E V FDKITAR+ +L YGL +H DPV + QKV +GVY GVTT +LD Sbjct: 1 MFVYKRDGRQEKVAFDKITARVSRLCYGLDSDHVDPVEITQKVISGVYPGVTTIELDNLA 60 Query: 303 XXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMY 428 HPDYA LAAR+AVSNLHK T+K FS ++ ++ Sbjct: 61 AETAATMTTKHPDYAILAARIAVSNLHKQTEKVFSTVVQQLH 102
>RIR3_YEAST (P21672) Ribonucleoside-diphosphate reductase large chain 2 (EC| 1.17.4.1) (Ribonucleotide reductase large subunit 2) (Ribonucleotide reductase DNA damage-inducible regulatory subunit 2) (Ribonucleotide reductase R1 subunit 2) Length = 869 Score = 117 bits (292), Expect = 2e-26 Identities = 55/102 (53%), Positives = 70/102 (68%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 302 MYV+KRDGR E V FDKIT+R+ +LSYGL D V V Q++ +GVY GVTT +LD Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60 Query: 303 XXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMY 428 HPDYA+LAAR+A+SNLHK T K FS+ I+D++ Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLH 102
>RIR1_BRARE (P79732) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase M1 subunit) (Ribonucleotide reductase large chain) (Ribonucleotide reductase protein R1 class I) Length = 794 Score = 117 bits (292), Expect = 2e-26 Identities = 55/102 (53%), Positives = 69/102 (67%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 302 M+V+KRDG E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD Sbjct: 1 MHVIKRDGGQEGVMFDKITSRIQKLCYGLNSDFVDPTQITMKVIQGLYSGVTTVELDTLA 60 Query: 303 XXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMY 428 HPDYA LAAR+AVSNLHK TKK FSE ++D+Y Sbjct: 61 AETAATSTTKHPDYAILAARIAVSNLHKETKKVFSEVMEDLY 102
>RIR1_CRYPV (O61065) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase R1 subunit) Length = 803 Score = 87.0 bits (214), Expect = 2e-17 Identities = 44/102 (43%), Positives = 57/102 (55%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 302 MYVV R G E V FD+I +R+ KLSYGL DP V Q V G+Y G+ TS+LD Sbjct: 1 MYVVNRKGEEEPVSFDQILSRITKLSYGL-HPLVDPARVTQAVINGLYSGIKTSELDELA 59 Query: 303 XXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMY 428 +H D++ LAAR++ SNLHKNT + +Y Sbjct: 60 SQTCAYMAATHNDFSKLAARISTSNLHKNTSSDIGDVASQLY 101
>RIR1_PLAF4 (P50648) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase R1 subunit) Length = 806 Score = 85.9 bits (211), Expect = 4e-17 Identities = 42/104 (40%), Positives = 59/104 (56%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 302 MYV+ R G E + FD+I R+++LSYGL E DP V Q V G+Y G+ T +LD Sbjct: 1 MYVLNRKGEEEDISFDQILKRIQRLSYGL-HELVDPARVTQGVINGMYSGIKTCELDELA 59 Query: 303 XXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMYLH 434 +HPD++ LAAR+ NLHKNT +E + +Y + Sbjct: 60 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDVAEVAEALYTY 103
>RIR1_PLAFG (P50647) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase R1 subunit) Length = 804 Score = 81.3 bits (199), Expect = 1e-15 Identities = 39/104 (37%), Positives = 57/104 (54%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXX 302 MYV+ R G E + FD+I R+++LSYGL + P V Q V G+Y + T +LD Sbjct: 1 MYVLNRKGEEEDISFDQILKRIQRLSYGLHKLGEYPACVTQGVINGMYSSIKTCELDELA 60 Query: 303 XXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMYLH 434 +HPD++ LAAR+ NLHKNT +E + +Y + Sbjct: 61 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDVAEVAEALYTY 104
>RIR1_TRYBB (O15909) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase R1 subunit) Length = 838 Score = 59.7 bits (143), Expect = 3e-09 Identities = 33/102 (32%), Positives = 51/102 (50%) Frame = +3 Query: 129 VVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXXXX 308 V KRDG E + +R+ L G+ + D + + V GV +G++TS LD Sbjct: 8 VTKRDGSVEPYDEKVVRSRIVNLMSGIDSYYVDVDDLVRVVGEGVREGMSTSMLDELLAE 67 Query: 309 XXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMYLH 434 HPDY LA R+AV+ LHK T +S ++ + ++ H Sbjct: 68 TAAYCVTKHPDYGLLAGRLAVTALHKTTTESVLDSFRVLHEH 109
>RIR1_BUCAI (P57276) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 761 Score = 44.7 bits (104), Expect = 1e-04 Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 4/98 (4%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQ-KVCAGV--YKGVTTSQL- 290 ++V KRDGR E ++ DKI L S GL D V V+Q ++C+ + Y +TT + Sbjct: 5 LFVTKRDGRKEKINLDKIHKVLNWASEGL-----DDVSVSQVELCSRIQFYNNITTINIH 59 Query: 291 DXXXXXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSF 404 + PDY +AAR+A+ +L K F Sbjct: 60 ETIIKAAADLISQDTPDYQYMAARLAIFHLRKKAYGQF 97
>RIR1_ENCCU (Q8SR37) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 768 Score = 43.9 bits (102), Expect = 2e-04 Identities = 23/96 (23%), Positives = 45/96 (46%) Frame = +3 Query: 147 RTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXXXXXXXXXX 326 ++E + D I +R++ L H D + +++ +G + +T + Sbjct: 11 KSEKLGIDLIRSRIEGYVKDLKLRHVDVDELVERIVSGWCEDMTRKETIDYCSETAASMI 70 Query: 327 XSHPDYASLAARVAVSNLHKNTKKSFSETIKDMYLH 434 HP+Y +++R+ VS +H+ T SF E IK + H Sbjct: 71 TKHPEYGQISSRIIVSYIHEITMDSFVEKIKYIQKH 106
>RIR1_SALTY (P37426) Ribonucleoside-diphosphate reductase 1 alpha subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase 1 R1 subunit) (Ribonucleotide reductase 1) (B1 protein) Length = 761 Score = 43.9 bits (102), Expect = 2e-04 Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 1/95 (1%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQL-DXX 299 + V KRDGRTE ++ DKI L + GL+ V + + Y G+ TS + + Sbjct: 5 LLVTKRDGRTERINLDKIHRVLDWAAEGLNNVSVSQVELRSHI--QFYDGIKTSDIHETI 62 Query: 300 XXXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSF 404 PDY LAAR+A+ +L K F Sbjct: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAFGQF 97
>RIR1_ECOLI (P00452) Ribonucleoside-diphosphate reductase 1 alpha subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase 1 R1 subunit) (Ribonucleotide reductase 1) (B1 protein) Length = 761 Score = 41.2 bits (95), Expect = 0.001 Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 1/95 (1%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQL-DXX 299 + V KRDG TE ++ DKI L + GL V + + Y G+ TS + + Sbjct: 5 LLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHI--QFYDGIKTSDIHETI 62 Query: 300 XXXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSF 404 PDY LAAR+A+ +L K F Sbjct: 63 IKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQF 97
>RIR1_HAEIN (P43754) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 756 Score = 39.3 bits (90), Expect = 0.004 Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 1/95 (1%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQL-DXX 299 + V KRDG E ++ DKI + + GL V + + Y+G+ TS + + Sbjct: 5 LMVTKRDGTQEQINLDKIHRVITWAAEGLDNVSVSQVELRSHI--QFYEGIRTSDIHETI 62 Query: 300 XXXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSF 404 PDY LAAR+A+ +L K F Sbjct: 63 IKAAADLISKDSPDYQYLAARLAIFHLRKKAYGHF 97
>RIR1_AQUAE (O66503) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 801 Score = 38.5 bits (88), Expect = 0.007 Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 1/101 (0%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQL-DXX 299 MYV+KR GR E + +KI +K GL + DP+ + G+TT ++ Sbjct: 3 MYVIKRSGRKEKLDINKIRIAIKFACEGL---NVDPLELEADAQIQFRDGITTKEIQQLL 59 Query: 300 XXXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKD 422 PD+ AAR+ + +L+K+ +++D Sbjct: 60 IKTAAEKVSAERPDWTYTAARLLLYDLYKDVAHLRGYSLRD 100
>RIR1_BUCAP (Q8K9W3) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 763 Score = 38.1 bits (87), Expect = 0.009 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 1/105 (0%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQL-DXX 299 ++V KR+G+ E ++ DKI L + GL V + ++ Y ++T + + Sbjct: 5 LFVTKRNGKKEKINLDKIHKVLNWAAKGLENISVSQVELRSRI--QFYNNISTVNIHETI 62 Query: 300 XXXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMYLH 434 + PDY +AAR+A+ +L K F ++Y H Sbjct: 63 IKAAADLISENTPDYQYMAARLAIFHLRKKAYGQFEP--PNLYYH 105
>Y832_METJA (Q58242) Hypothetical protein MJ0832 [Contains: Mja rnr-1 intein;| Mja rnr-2 intein] Length = 1750 Score = 37.7 bits (86), Expect = 0.012 Identities = 20/57 (35%), Positives = 34/57 (59%) Frame = +3 Query: 120 KMYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQL 290 + YV+KRD R E + +K+ L ++ G++ D ++ +VCA VY G+TT +L Sbjct: 13 EFYVIKRDKRKEKFNVNKLAKSL--INSGVNYGDLDTII--SEVCAKVYNGITTDEL 65
>RIR1_MIMIV (Q7T6Y8) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 881 Score = 36.6 bits (83), Expect = 0.027 Identities = 20/96 (20%), Positives = 39/96 (40%) Frame = +3 Query: 141 DGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXXXXXXXX 320 +G + + + I ++K+ + H D + + + + T +D Sbjct: 75 NGSIQVITSEIIRTYVEKIFEKMEVTHLDIDKMTKNIFPKLKSINTIKDIDNQIISTASE 134 Query: 321 XXXSHPDYASLAARVAVSNLHKNTKKSFSETIKDMY 428 H DY +A + ++NLH NT F ET + +Y Sbjct: 135 MVTDHYDYPKIAVWILMTNLHDNTSDDFLETAEKLY 170
>RIR1_BUCBP (Q89AS4) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 761 Score = 36.6 bits (83), Expect = 0.027 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 1/96 (1%) Frame = +3 Query: 123 MYVVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQL-DXX 299 ++V KR+G+ E ++ DKI L + GL E+ VA K Y + T+ + + Sbjct: 5 LFVTKRNGKIELINLDKIHRVLNWAAKGL--ENISISQVALKSRIQFYNNIKTTIIHETI 62 Query: 300 XXXXXXXXXXSHPDYASLAARVAVSNLHKNTKKSFS 407 + PDY +AAR+ + +L K F+ Sbjct: 63 IKAAADLISENSPDYQYMAARLTIFHLRKKAFGQFN 98
>RIR1_CHLTR (O84834) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 1047 Score = 35.0 bits (79), Expect = 0.079 Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 2/102 (1%) Frame = +3 Query: 129 VVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXXXX 308 V+ +DG T T+ ++ A L + + E D L+ A Y G+ S++ Sbjct: 239 VLSKDGSTYTMTHSQLLAHLAR-ACSRFPETTDAALLTDMAFANFYSGIKESEVVLACIM 297 Query: 309 XXXXXXXSHPDYASLAARVAVSNLHKNT--KKSFSETIKDMY 428 PDYA +AA + + ++K K ++E ++ + Sbjct: 298 AARANIEKEPDYAFVAAELLLDVVYKEALGKSKYAEDLEQAH 339
>RIR1_ASFB7 (P42491) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 778 Score = 35.0 bits (79), Expect = 0.079 Identities = 14/29 (48%), Positives = 23/29 (79%) Frame = +3 Query: 333 HPDYASLAARVAVSNLHKNTKKSFSETIK 419 H DY++LAAR++V LH++T SFS+ ++ Sbjct: 48 HYDYSTLAARLSVYQLHQSTASSFSKAVR 76
>RIR1_ASFM2 (P26685) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 779 Score = 33.1 bits (74), Expect = 0.30 Identities = 14/28 (50%), Positives = 22/28 (78%) Frame = +3 Query: 333 HPDYASLAARVAVSNLHKNTKKSFSETI 416 H DY++LAAR++V LH++T SFS+ + Sbjct: 49 HYDYSTLAARLSVYLLHQSTASSFSKAV 76
>RIR1_CHLMU (Q9PL93) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 1047 Score = 32.7 bits (73), Expect = 0.39 Identities = 20/86 (23%), Positives = 37/86 (43%) Frame = +3 Query: 129 VVKRDGRTETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDXXXXX 308 V+ +DG T + ++ ARL + + E D L+ + Y G+ S++ Sbjct: 239 VLSKDGSTYMITHSQLLARLAR-ACSRFPETTDAALLTDMAFSNFYSGIKESEVVLACIM 297 Query: 309 XXXXXXXSHPDYASLAARVAVSNLHK 386 PDYA +AA + + ++K Sbjct: 298 AARANIEKEPDYAFVAAELLLDVVYK 323
>RIR1_CHLPN (Q9Z6S5) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 1044 Score = 31.2 bits (69), Expect = 1.1 Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 3/92 (3%) Frame = +3 Query: 126 YVV-KRDGRTETVHFDKITARLKKLSYGLSQ--EHCDPVLVAQKVCAGVYKGVTTSQLDX 296 YVV K DG T + + T K+ S+ + + D L+A +Y G+ ++ Sbjct: 235 YVVQKEDG---TTYLLRKTDLEKRFSWACKRFPKTTDSQLLADMAFMNLYSGIKEDEVTT 291 Query: 297 XXXXXXXXXXXSHPDYASLAARVAVSNLHKNT 392 PDYA +AA + S+L++ T Sbjct: 292 ACIMAARANIEREPDYAFIAAELLTSSLYEET 323 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,300,320 Number of Sequences: 219361 Number of extensions: 319904 Number of successful extensions: 1078 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 1065 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1069 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
