>gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA,
           complete cds
          Length = 3054

 Score =  460 bits (232), Expect = e-126
 Identities = 241/244 (98%)
 Strand = Plus / Plus

                                                                       
Query: 36  tgccagggcagggttgcacagtctagctaggtcgaaaccaaccaagacggtgcgaccttc 95
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1   tgccagggcagggttgcacagtctagctaggtcgaaaccaaccaagacggtgcaaccttc 60

                                                                       
Query: 96  cgccccatcgcgtagcgcaatagccaacaccgtagcgtacccacgatgctgacggcgacc 155
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cgccccatcgcgtagcgcaatagccaacaccgtagcgtacccacgatgctgacggcgacc 120

                                                                       
Query: 156 aggccgctagtcgggggcgcgtgtgccgcgccgtcgtcgtcggcccggcggaggacgttc 215
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagccgctagtcgggggcgcgtgtgccgcgccgtcgtcgtcggcccggcggaggacgttc 180

                                                                       
Query: 216 gtggtgcccgaggctcgccggaaaccaggcaatggccgccgcaccaatgtctccaaggtg 275
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 181 gtggtgcccgaggctcgccggaaaccaggcaatggccgccgcaccagtgtctccaaggtg 240

               
Query: 276 ggca 279
           ||||
Sbjct: 241 ggca 244



 Score =  283 bits (143), Expect = 2e-73
 Identities = 145/146 (99%)
 Strand = Plus / Plus

                                                                       
Query: 318 ttgtccgccgactccaatggggcggccgttggcacggtaacccgcccggacgtccacgtc 377
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ttgtccgccgactccaatggggcggccgttggcacggtaacccgcccggacgtccacgtc 342

                                                                       
Query: 378 caggaccgcacgcacgccaccgagatgaaggccacggtgacggtgcacatgagtaaggca 437
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 caggaccgcacgcacgccaccgagatgaaggccacggtgacggtgcacatgagtaaggca 402

                                     
Query: 438 gccggngttcgtgatttcctctacga 463
           ||||| ||||||||||||||||||||
Sbjct: 403 gccggggttcgtgatttcctctacga 428

>emb|AJ507212.1|HVU507212 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:2 gene)
          Length = 3023

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 398 cgagatgaaggccacggtgacggtgcacatga 429
           ||||||||||||||||||| ||||||||||||
Sbjct: 326 cgagatgaaggccacggtgtcggtgcacatga 357

>ref|NM_102798.1| Arabidopsis thaliana EMB2279 AT1G30610 (EMB2279) mRNA, complete cds
          Length = 3021

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 9    cttccatcacctcttcctttcctgatctgc 38
            ||||||||||||| |||||||||| |||||
Sbjct: 2689 cttccatcacctcctcctttcctgctctgc 2660

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 169    ggggcgcgtgtgccgcgccgtcgtcgtcg 197
              |||||||||||||||||||| || |||||
Sbjct: 996213 ggggcgcgtgtgccgcgccggcgccgtcg 996241

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 181      ccgcgccgtcgtcgtcggccc 201
                |||||||||||||||||||||
Sbjct: 11464690 ccgcgccgtcgtcgtcggccc 11464670

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 169     ggggcgcgtgtgccgcgccgtcgtcgtcg 197
               |||||||||||||||||||| || |||||
Sbjct: 2313682 ggggcgcgtgtgccgcgccggcgccgtcg 2313710

>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0042L15, from chromosome 3, complete sequence
          Length = 172475

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 181   ccgcgccgtcgtcgtcggccc 201
             |||||||||||||||||||||
Sbjct: 15262 ccgcgccgtcgtcgtcggccc 15242

>gb|AY054120.1|AY054120 Mycobacterium smegmatis cosmid cTra12, partial sequence
          Length = 30277

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 143   gctgacggcgaccaggccgct 163
             |||||||||||||||||||||
Sbjct: 18022 gctgacggcgaccaggccgct 18042

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 169     ggggcgcgtgtgccgcgccgtcgtcgtcg 197
               |||||||||||||||||||| || |||||
Sbjct: 1861233 ggggcgcgtgtgccgcgccggcgccgtcg 1861261

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 181      ccgcgccgtcgtcgtcggccc 201
                |||||||||||||||||||||
Sbjct: 11461453 ccgcgccgtcgtcgtcggccc 11461433

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 180    gccgcgccgtcgtcgtcggcc 200
              |||||||||||||||||||||
Sbjct: 293702 gccgcgccgtcgtcgtcggcc 293682

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 180     gccgcgccgtcgtcgtcggcc 200
               |||||||||||||||||||||
Sbjct: 2096821 gccgcgccgtcgtcgtcggcc 2096841



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 181     ccgcgccgtcgtcgtcggcc 200
               ||||||||||||||||||||
Sbjct: 4599530 ccgcgccgtcgtcgtcggcc 4599549

>gb|AC146383.4| Pan troglodytes BAC clone RP43-125D18 from 7, complete sequence
          Length = 141329

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 21    cttcctttcctgatctgccagggc 44
             |||||||||||||| |||||||||
Sbjct: 31172 cttcctttcctgatgtgccagggc 31149

>gb|AC110038.25| Mus musculus chromosome 1, clone RP23-258M15, complete sequence
          Length = 232830

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   caccaatgtctccaaggtgg 276
             ||||||||||||||||||||
Sbjct: 27103 caccaatgtctccaaggtgg 27122

>emb|AL137800.12| Human DNA sequence from clone RP1-127C7 on chromosome 1q25.1-31.1
             Contains the 3' end of the C1orf16 gene for chromosome 1
             open reading frame 16, the NCF2 gene for neutrophil
             cytosolic factor 2 (65kDa, chronic granulomatous disease,
             autosomal 2), a novel gene, the ARPC5 gene for actin
             related protein 2/3 complex subunit 5 (16kDa), the 5' end
             of the RGL1 gene for ral guanine nucleotide dissociation
             stimulator-like 1, a novel gene (MGC26594) and a CpG
             island, complete sequence
          Length = 185832

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   caccaatgtctccaaggtgg 276
             ||||||||||||||||||||
Sbjct: 27314 caccaatgtctccaaggtgg 27295

>gb|AC006960.1|AC006960 Homo sapiens clone RP11-182J23 from 7p14-15, complete sequence
          Length = 179757

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 21     cttcctttcctgatctgccagggc 44
              |||||||||||||| |||||||||
Sbjct: 137738 cttcctttcctgatgtgccagggc 137761

>gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putative genetic modifier,
            hypothetical protein, putative NAM protein, putative
            cis-zeatin O-glucosyltransferases, putative small nuclear
            ribonucleoprotein, putative cis-zeatin
            O-glucosyltransferase, putative glutathione peroxidase,
            putative copper-exporting ATPases, putative
            serine/threonine dehydratase, and putative actin
            depolymerizing factor genes, complete cds; and
            hypothetical protein gene, partial cds
          Length = 157237

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 178  gtgccgcgccgtcgtcgtcg 197
            ||||||||||||||||||||
Sbjct: 4453 gtgccgcgccgtcgtcgtcg 4472

>gb|U90140.1|CBU90140 Citrobacter braakii TyrR (tyrR) gene, complete cds
          Length = 2046

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    gatccttccatcacctcttc 24
            ||||||||||||||||||||
Sbjct: 1761 gatccttccatcacctcttc 1742


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,343,721
Number of Sequences: 3902068
Number of extensions: 2343721
Number of successful extensions: 47888
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47371
Number of HSP's gapped (non-prelim): 517
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)