ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl46e02 |
|---|---|
| Clone Library Name | barley_pub |
>GP176_MOUSE (Q80WT4) Probable G-protein coupled receptor 176 (G-protein coupled| receptor AGR9) Length = 515 Score = 33.1 bits (74), Expect = 0.19 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Frame = +1 Query: 31 HCGWWLFSV----VLECIPSLRCSTTALVVYSASCDARYSLPQPLRLK 162 HC WW++++ VL+ + + CS T L + + D YS+ PL K Sbjct: 105 HCCWWIYTMLFCKVLKFLHKVFCSVTVLSFPAIALDRYYSVLYPLERK 152
>GP176_RAT (Q64017) Probable G-protein coupled receptor 176 (G-protein coupled| receptor AGR9) (RBU-15) Length = 513 Score = 33.1 bits (74), Expect = 0.19 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Frame = +1 Query: 31 HCGWWLFSV----VLECIPSLRCSTTALVVYSASCDARYSLPQPLRLK 162 HC WW++++ VL+ + + CS T L + + D YS+ PL K Sbjct: 105 HCCWWIYTMLFCKVLKFLHKVFCSVTVLSFPAIALDRYYSVLYPLERK 152
>GP176_HUMAN (Q14439) Probable G-protein coupled receptor 176 (HB-954)| Length = 515 Score = 31.6 bits (70), Expect = 0.55 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Frame = +1 Query: 31 HCGWWLFSV----VLECIPSLRCSTTALVVYSASCDARYSLPQPLRLK 162 HC WW++++ V++ + + CS T L + + D YS+ PL K Sbjct: 106 HCCWWIYTMLFCKVVKFLHKVFCSVTILSFPAIALDRYYSVLYPLERK 153
>CXA9_RAT (O70610) Gap junction alpha-9 protein (Connexin-36) (Cx36)| Length = 321 Score = 29.3 bits (64), Expect = 2.7 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = +1 Query: 22 PRTHCGWWLFSVVLECIPSLRCSTTALVVYSASCDARYS 138 P +H +W+F +++ C PSL T ++ + + RYS Sbjct: 72 PISHIRYWVFQIIMVCTPSLCFITYSVHQSAKQRERRYS 110
>CXA9_MOUSE (O54851) Gap junction alpha-9 protein (Connexin-36) (Cx36)| Length = 321 Score = 29.3 bits (64), Expect = 2.7 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = +1 Query: 22 PRTHCGWWLFSVVLECIPSLRCSTTALVVYSASCDARYS 138 P +H +W+F +++ C PSL T ++ + + RYS Sbjct: 72 PISHVRYWVFQIIMVCTPSLCFITYSVHQSAKQRERRYS 110
>CXA9_HUMAN (Q9UKL4) Gap junction alpha-9 protein (Connexin-36) (Cx36)| Length = 321 Score = 29.3 bits (64), Expect = 2.7 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = +1 Query: 22 PRTHCGWWLFSVVLECIPSLRCSTTALVVYSASCDARYS 138 P +H +W+F +++ C PSL T ++ + + RYS Sbjct: 72 PISHIRYWVFQIIMVCTPSLCFITYSVHQSAKQRERRYS 110
>CXA9_BOVIN (Q866T7) Gap junction alpha-9 protein (Connexin-36) (Cx36)| Length = 321 Score = 29.3 bits (64), Expect = 2.7 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = +1 Query: 22 PRTHCGWWLFSVVLECIPSLRCSTTALVVYSASCDARYS 138 P +H +W+F +++ C PSL T ++ + + RYS Sbjct: 72 PISHIRYWVFQIIMVCTPSLCFITYSVHQSAKQRERRYS 110
>CXA9_RAJOC (P69999) Gap junction alpha-9 protein (Connexin-35) (Cx35)| Length = 302 Score = 28.9 bits (63), Expect = 3.6 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = +1 Query: 22 PRTHCGWWLFSVVLECIPSLRCSTTALVVYSASCDARYS 138 P +H +W+F +++ C PSL T ++ S + +YS Sbjct: 72 PISHIRYWVFQIIMVCTPSLCFITYSVHQSSKQRERQYS 110
>CXA9_RAJER (P69998) Gap junction alpha-9 protein (Connexin-35) (Cx35)| Length = 302 Score = 28.9 bits (63), Expect = 3.6 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = +1 Query: 22 PRTHCGWWLFSVVLECIPSLRCSTTALVVYSASCDARYS 138 P +H +W+F +++ C PSL T ++ S + +YS Sbjct: 72 PISHIRYWVFQIIMVCTPSLCFITYSVHQSSKQRERQYS 110 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,313,760 Number of Sequences: 219361 Number of extensions: 361714 Number of successful extensions: 846 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 829 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 843 length of database: 80,573,946 effective HSP length: 68 effective length of database: 65,657,398 effective search space used: 1575777552 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
