Clone Name | bastl46d12 |
---|---|
Clone Library Name | barley_pub |
>I2C4_MOUSE (Q8CJF8) Eukaryotic translation initiation factor 2C 4 (eIF2C 4)| (eIF-2C 4) (Argonaute-4) (Piwi/argonaute family protein meIF2C4) Length = 861 Score = 33.9 bits (76), Expect = 0.13 Identities = 17/35 (48%), Positives = 26/35 (74%) Frame = +3 Query: 36 GLGKKGQPIQLLANHYKVSVKPS*EFFNHYYVNLK 140 GLG G+PI+LLANH++V + P + + HY V++K Sbjct: 20 GLGTVGKPIRLLANHFQVQI-PKIDVY-HYDVDIK 52
>I2C4_HUMAN (Q9HCK5) Eukaryotic translation initiation factor 2C 4 (eIF2C 4)| (eIF-2C 4) (Argonaute-4) Length = 861 Score = 33.9 bits (76), Expect = 0.13 Identities = 17/35 (48%), Positives = 26/35 (74%) Frame = +3 Query: 36 GLGKKGQPIQLLANHYKVSVKPS*EFFNHYYVNLK 140 GLG G+PI+LLANH++V + P + + HY V++K Sbjct: 20 GLGTVGKPIRLLANHFQVQI-PKIDVY-HYDVDIK 52
>I2C1_MOUSE (Q8CJG1) Eukaryotic translation initiation factor 2C 1 (eIF2C 1)| (eIF-2C 1) (Argonaute-1) (Piwi/argonaute family protein meIF2C1) Length = 857 Score = 31.6 bits (70), Expect = 0.63 Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Frame = +3 Query: 3 PRRHIMARPAN-GLGKKGQPIQLLANHYKVSVKPS*EFFNHYYVNLK 140 P + + P G+G G+PI+LLAN+++V + P + + HY V++K Sbjct: 16 PLQQVFQAPRRPGIGTVGKPIKLLANYFEVDI-PKIDVY-HYEVDIK 60
>I2C1_HUMAN (Q9UL18) Eukaryotic translation initiation factor 2C 1 (eIF2C 1)| (eIF-2C 1) (Argonaute-1) (Putative RNA-binding protein Q99) Length = 857 Score = 31.6 bits (70), Expect = 0.63 Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Frame = +3 Query: 3 PRRHIMARPAN-GLGKKGQPIQLLANHYKVSVKPS*EFFNHYYVNLK 140 P + + P G+G G+PI+LLAN+++V + P + + HY V++K Sbjct: 16 PLQQVFQAPRRPGIGTVGKPIKLLANYFEVDI-PKIDVY-HYEVDIK 60
>RNZ_CLOPE (Q8XKN1) Ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNase Z) (tRNA 3| endonuclease) Length = 316 Score = 30.8 bits (68), Expect = 1.1 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +3 Query: 9 RHIMARPANGLGKKGQPIQLLANHYKVSVKPS*EFFNH 122 +H+ + A L KKGQ +LL H+ S+ EF N+ Sbjct: 256 KHMTFKEAANLAKKGQVKELLLTHFSPSINDPKEFINN 293 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,895,839 Number of Sequences: 219361 Number of extensions: 258463 Number of successful extensions: 844 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 831 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 844 length of database: 80,573,946 effective HSP length: 22 effective length of database: 75,748,004 effective search space used: 1817952096 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)