>dbj|AP001709.1| Homo sapiens genomic DNA, chromosome 21q, section 53/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 27     cctgccaatgggttggggaag 47
              |||||||||||||||||||||
Sbjct: 257260 cctgccaatgggttggggaag 257240

>dbj|AP000245.3| Homo sapiens genomic DNA, chromosome 21 clone:RP11-14B21, complete
             sequence
          Length = 159903

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 27    cctgccaatgggttggggaag 47
             |||||||||||||||||||||
Sbjct: 25836 cctgccaatgggttggggaag 25816

>dbj|AP000205.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             f43D11-119B8, segment 3/12, complete sequence
          Length = 100000

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 27    cctgccaatgggttggggaag 47
             |||||||||||||||||||||
Sbjct: 92248 cctgccaatgggttggggaag 92228

>gb|AC108424.14| Mus musculus chromosome 7, clone RP23-105A10, complete sequence
          Length = 198191

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    tctgtcaagccttcatagga 109
             ||||||||||||||||||||
Sbjct: 29494 tctgtcaagccttcatagga 29475

>gb|AC169985.2| Mus musculus BAC clone RP23-289G14 from chromosome 13, complete
             sequence
          Length = 218393

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    tctgtcaagccttcatagga 109
             ||||||||||||||||||||
Sbjct: 86893 tctgtcaagccttcatagga 86912

>gb|AC116895.12| Mus musculus chromosome 8, clone RP24-531C8, complete sequence
          Length = 170041

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    tctgtcaagccttcatagga 109
             ||||||||||||||||||||
Sbjct: 27798 tctgtcaagccttcatagga 27779

>gb|AC145592.3| Mus musculus BAC clone RP24-335F16 from chromosome y, complete sequence
          Length = 167384

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    tctgtcaagccttcatagga 109
             ||||||||||||||||||||
Sbjct: 96955 tctgtcaagccttcatagga 96936

>gb|AC157790.10| Mus musculus chromosome 7, clone RP24-151M10, complete sequence
          Length = 167728

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     tctgtcaagccttcatagga 109
              ||||||||||||||||||||
Sbjct: 123315 tctgtcaagccttcatagga 123296

>gb|AC140109.4| Mus musculus BAC clone RP24-156A17 from chromosome 3, complete sequence
          Length = 130716

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    tctgtcaagccttcatagga 109
             ||||||||||||||||||||
Sbjct: 70597 tctgtcaagccttcatagga 70578

>gb|AC121842.3| Mus musculus BAC clone RP24-80L24 from chromosome 3, complete sequence
          Length = 173273

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     tctgtcaagccttcatagga 109
              ||||||||||||||||||||
Sbjct: 112621 tctgtcaagccttcatagga 112640

>gb|AC122286.4| Mus musculus BAC clone RP23-252F4 from chromosome 6, complete sequence
          Length = 178633

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    tctgtcaagccttcatagga 109
             ||||||||||||||||||||
Sbjct: 34148 tctgtcaagccttcatagga 34167

>gb|AC102573.10| Mus musculus chromosome 1, clone RP23-237L7, complete sequence
          Length = 185146

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    tctgtcaagccttcatagga 109
             ||||||||||||||||||||
Sbjct: 94393 tctgtcaagccttcatagga 94374

>gb|AC090122.26| Mus musculus strain C57BL/6J clone rp23-28a7 map 7, complete sequence
          Length = 212485

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     tctgtcaagccttcatagga 109
              ||||||||||||||||||||
Sbjct: 102400 tctgtcaagccttcatagga 102419

>gb|AC160633.3| Mus musculus chromosome 8, clone RP23-407P24, complete sequence
          Length = 203628

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     tctgtcaagccttcatagga 109
              ||||||||||||||||||||
Sbjct: 139325 tctgtcaagccttcatagga 139344

>gb|AC084072.13| Mus musculus strain 129S6/SvEvTac clone rp22-511i2, complete sequence
          Length = 114579

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 90   tctgtcaagccttcatagga 109
            ||||||||||||||||||||
Sbjct: 2014 tctgtcaagccttcatagga 1995

>dbj|AK033102.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length
           enriched library, clone:8030423P22 product:retinol
           dehydrogenase 1 (11-cis), full insert sequence
          Length = 3215

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  tctgtcaagccttcatagga 109
           ||||||||||||||||||||
Sbjct: 909 tctgtcaagccttcatagga 928

>gb|AC083817.19|AC083817 Mus musculus 1 BAC RP23-470G12 (Roswell Park Cancer Institute Mouse BAC)
              complete sequence
          Length = 204950

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     tctgtcaagccttcatagga 109
              ||||||||||||||||||||
Sbjct: 195730 tctgtcaagccttcatagga 195749

>emb|BX119995.6| Mouse DNA sequence from clone RP23-318H22 on chromosome X, complete
              sequence
          Length = 142284

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     tctgtcaagccttcatagga 109
              ||||||||||||||||||||
Sbjct: 107965 tctgtcaagccttcatagga 107946

>gb|AC163641.5| Mus musculus BAC clone RP24-445G19 from chromosome 13, complete
             sequence
          Length = 190073

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    tctgtcaagccttcatagga 109
             ||||||||||||||||||||
Sbjct: 74226 tctgtcaagccttcatagga 74245

>gb|AC140462.3| Mus musculus BAC clone RP23-13K8 from 14, complete sequence
          Length = 199933

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     gcccatccagctgcttgcta 75
              ||||||||||||||||||||
Sbjct: 147063 gcccatccagctgcttgcta 147044

>gb|AC133199.3| Mus musculus BAC clone RP23-263B18 from 6, complete sequence
          Length = 185278

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    tctgtcaagccttcatagga 109
             ||||||||||||||||||||
Sbjct: 17600 tctgtcaagccttcatagga 17581

>gb|AC139942.4| Mus musculus BAC clone RP23-447N11 from 3, complete sequence
          Length = 186057

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     tctgtcaagccttcatagga 109
              ||||||||||||||||||||
Sbjct: 156905 tctgtcaagccttcatagga 156886

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 42      gggaagaagggtcagcccatccag 65
               ||||||||||| ||||||||||||
Sbjct: 3047755 gggaagaagggccagcccatccag 3047732

>gb|AC165351.2| Mus musculus BAC clone RP23-197K16 from chromosome 12, complete
             sequence
          Length = 211170

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    gttggggaagaagggtcag 56
             |||||||||||||||||||
Sbjct: 68336 gttggggaagaagggtcag 68354

>ref|XM_322580.1| Neurospora crassa OR74A hypothetical protein (NCU00495.1) partial
            mRNA
          Length = 4293

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 45   aagaagggtcagcccatcc 63
            |||||||||||||||||||
Sbjct: 3496 aagaagggtcagcccatcc 3514

>ref|XM_951087.1| Neurospora crassa OR74A hypothetical protein (NCU00495.1) partial
            mRNA
          Length = 4293

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 45   aagaagggtcagcccatcc 63
            |||||||||||||||||||
Sbjct: 3496 aagaagggtcagcccatcc 3514

>emb|CT009713.8| Mouse DNA sequence from clone RP23-151C6 on chromosome 13, complete
              sequence
          Length = 217752

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 78     cactacaaagtctctgtca 96
              |||||||||||||||||||
Sbjct: 196666 cactacaaagtctctgtca 196648

>gb|AC124499.3| Mus musculus BAC clone RP24-68G23 from chromosome 12, complete sequence
          Length = 209276

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 38     gttggggaagaagggtcag 56
              |||||||||||||||||||
Sbjct: 103756 gttggggaagaagggtcag 103738

>gb|AC124184.3| Mus musculus BAC clone RP23-227N23 from 10, complete sequence
          Length = 182135

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 87     gtctctgtcaagccttcatagga 109
              |||||| ||||||||||||||||
Sbjct: 172435 gtctctatcaagccttcatagga 172413

>gb|AC011448.5| Homo sapiens chromosome 19 clone CTC-260F20, complete sequence
          Length = 165122

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 36     gggttggggaagaagggtc 54
              |||||||||||||||||||
Sbjct: 103096 gggttggggaagaagggtc 103114

>gb|AC152977.1| Mus musculus 10 BAC RP23-251I19 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 192515

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 87   gtctctgtcaagccttcatagga 109
            |||||| ||||||||||||||||
Sbjct: 9740 gtctctatcaagccttcatagga 9718

>emb|AL671865.11| Mouse DNA sequence from clone RP23-312B13 on chromosome X, complete
              sequence
          Length = 226471

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 91     ctgtcaagccttcatagga 109
              |||||||||||||||||||
Sbjct: 117246 ctgtcaagccttcatagga 117264

>gb|AC132123.3| Mus musculus BAC clone RP24-79F8 from 1, complete sequence
          Length = 214923

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 36    gggttggggaagaagggtcagcc 58
             |||||||| ||||||||||||||
Sbjct: 98941 gggttgggaaagaagggtcagcc 98919

>emb|AL844489.6| Mouse DNA sequence from clone RP23-101P8 on chromosome 2, complete
              sequence
          Length = 213549

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 31     ccaatgggttggggaagaa 49
              |||||||||||||||||||
Sbjct: 124484 ccaatgggttggggaagaa 124502


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,128,188
Number of Sequences: 3902068
Number of extensions: 1128188
Number of successful extensions: 77918
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77836
Number of HSP's gapped (non-prelim): 82
length of query: 140
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 119
effective length of database: 17,151,101,840
effective search space: 2040981118960
effective search space used: 2040981118960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)