>CO7_HUMAN (P10643) Complement component C7 precursor|
          Length = 843

 Score = 32.0 bits (71), Expect = 0.80
 Identities = 24/114 (21%), Positives = 45/114 (39%)
 Frame = +3

Query: 72  ISHLSALTSDGSTARPKPIQKYCQNVCDISSIVSPLIEDICKSPEEQLDEVLRELDIAIN 251
           IS LS L  D      +    + ++V ++  ++        K     L E+++E+  A  
Sbjct: 385 ISGLSYLELDNPAGNKRRYSAWAESVTNLPQVI--------KQKLTPLYELVKEVPCA-- 434

Query: 252 EASGLIGNWHQTTSKIYFVWQIESVISDIQGCSLQLCQLANSLLPSLTGCACIC 413
                      +  K+Y  W +E  + +   C  + CQ  N  L ++ G  C+C
Sbjct: 435 -----------SVKKLYLKWALEEYLDEFDPCHCRPCQ--NGGLATVEGTHCLC 475

>YL022_YEAST (Q07953) Hypothetical UPF0023 protein YLR022c|
          Length = 250

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = +3

Query: 180 IEDICKSPEEQLDEVLRELDIAINEASGLIGNWHQTTSKIYFVWQIESVISDI 338
           ++D  K  E+ LDEVL+   + +N + GL+ N  +   K +    ++ VI +I
Sbjct: 36  VQDYRKGIEKDLDEVLQIHQVFMNVSKGLVAN-KEDLQKCFGTTNVDDVIEEI 87

>DPOE_CANGA (Q6FNY7) DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7)|
           (DNA polymerase II subunit A)
          Length = 2217

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
 Frame = +3

Query: 21  LRPGLMEDFSPRALLNSISHLSALTSDGSTARPKPIQKYCQNVCDISSIVSPLIEDICKS 200
           LRP L E+ S +   N   H +    +G  +             +++   S  ++D  K 
Sbjct: 188 LRPILAENESNKQQRNVFKHSNISNGNGMLSS------------NVNRFASSSVQD--KK 233

Query: 201 PEEQLDEVLRELDIAINEASGL-----IGNWHQTTSKIYFVWQIESVISD 335
             +Q  E +RE D+  +    +     +G W++ T + +FVW  +   +D
Sbjct: 234 DAKQYIEDIREYDVPYHVRVSIDKDIRVGKWYKVTHEGFFVWPDKVAFAD 283

>RB_MOUSE (P13405) Retinoblastoma-associated protein (PP105) (RB)|
          Length = 921

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = +3

Query: 45  FSPRALLNSISHLSALTSDGSTARPKPIQKYCQNVCDISSIVSPLIEDICKSPEEQLDEV 224
           FSP ALL      +A+  +GS   P+  Q     +       + +IE +CK  E  +DEV
Sbjct: 223 FSPPALLREPYKTAAIPINGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKEHECNIDEV 282

>GLE1_BRARE (Q6DRB1) Nucleoporin GLE1 (GLE1-like protein)|
          Length = 695

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
 Frame = +3

Query: 6   PSPTPLRPGLMEDFSPRALLNSISHLSA-------LTSDGSTARPKPIQKYCQNVCDISS 164
           PS +PL   +++  SPR LL + S  S+       L+ + +  R  PI    +       
Sbjct: 43  PSLSPLSGQILKRMSPRMLLKNCSRSSSVRDTSPGLSEEAAVCRSAPISPRLKRSSCSLP 102

Query: 165 IVSPLIEDICKSPEEQLDEVLRELDIAINEAS 260
            VS   E+  +  EE+  EV+ E      EAS
Sbjct: 103 AVSIQTEEEEEKEEEEKAEVVVEAPAVSPEAS 134

>SECA_SPIOL (Q36795) Preprotein translocase secA subunit, chloroplast precursor|
          Length = 1036

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +3

Query: 309 WQIESVISDIQGCSLQLCQLANSLLPSLTGCACICIQKLQD 431
           W +E +I+ +Q    Q C L N L P L    C   + LQD
Sbjct: 857 WDLEKLIAKLQ----QYCYLLNDLTPELLSNNCSTYEDLQD 893

>FUMC_SULSO (P39461) Fumarate hydratase class II (EC 4.2.1.2) (Fumarase C)|
          Length = 438

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
 Frame = +3

Query: 69  SISHLSALTSDGSTARPKPIQKYCQNVCDISSIVSPLI-----EDICKSPEE--QLDEVL 227
           ++  +S L  DG  A  + +++Y ++   + +IVSP+I      +I K   +   + E L
Sbjct: 352 ALEKMSRLVIDGMVANVEKMKRYAESSPSLITIVSPVIGYDKATEIGKKLNKGMSIREAL 411

Query: 228 RELDIAINEASGLI 269
           REL  + NE + ++
Sbjct: 412 RELGYSDNEINKIL 425

>HM2L1_HUMAN (Q9UGU5) High mobility group protein 2-like 1 (HMGBCG protein)|
          Length = 601

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 22/69 (31%), Positives = 33/69 (47%)
 Frame = +3

Query: 195 KSPEEQLDEVLRELDIAINEASGLIGNWHQTTSKIYFVWQIESVISDIQGCSLQLCQLAN 374
           K+PE +  +V   L + + E+  LIG+  Q T  +  V    SV+ D   C+L       
Sbjct: 515 KAPETEPIDVAAHLQL-LGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLT 573

Query: 375 SLLPSLTGC 401
           + LP L GC
Sbjct: 574 TQLPELNGC 582

>GLPK_PYRFU (Q8TZI8) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol|
           3-phosphotransferase) (Glycerokinase) (GK)
          Length = 490

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 192 CKSPEEQLDEVLRELDIAINEASGLIGNWHQTTSKIYFVWQIESV 326
           C+   E ++E+ RE    I E +GL+ + + + SKI   W +++V
Sbjct: 103 CRRTAEMVEEIKREYSDVIKEKTGLVPDAYFSASKI--AWLLDNV 145

>TXND4_MOUSE (Q9D1Q6) Thioredoxin domain-containing protein 4 precursor|
           (Endoplasmic reticulum resident protein ERp44)
          Length = 406

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 138 CQNVCDISSIVSPLIEDICKSPEEQLDEVLRELDIAI 248
           C  +  ++SI +P+  +I     E +DE+L   D+A+
Sbjct: 14  CSLLLLVTSIFTPITAEIASLDSENIDEILNNADVAL 50

>DPOL_METJA (Q58295) DNA polymerase (EC 2.7.7.7) [Contains: Mja pol-1 intein;|
           Mja pol-2 intein]
          Length = 1634

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = -2

Query: 459 PDQTCAHNLCPGVSEYKCKHIQSEKVIKN*QADTIEGSIPEYLRSLIQ 316
           P    ++N+ P   + +C    SEK++ +      EG IP+ LR+LI+
Sbjct: 798 PSIIISYNISPDTLDCECCKDVSEKILGHWFCKKKEGLIPKTLRNLIE 845

>BFR_AZOVI (P22759) Bacterioferritin (BFR) (Cytochrome b-557.5)|
          Length = 156

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +3

Query: 135 YCQNVCDISSIVSPLIEDICKSPEEQLDEVLRELDI 242
           YC++V D +S    L+EDI +S E+ +D +  +LD+
Sbjct: 107 YCESVGDYAS--RELLEDILESEEDHIDWLETQLDL 140

>RR3_CHLVU (P56365) Chloroplast 30S ribosomal protein S3|
          Length = 231

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 119 QAYSEVLP-KCMRYIKHREPSHRRYMQVS*RATR*GVKG 232
           +AY+EVL  K +  ++ R+P  R   Q   RA R GVKG
Sbjct: 126 EAYAEVLAEKLVEELEQRKPFRRAMRQTVQRALRAGVKG 164


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,663,596
Number of Sequences: 219361
Number of extensions: 1253570
Number of successful extensions: 3370
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3370
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)