ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl46d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479734.1| Oryza sativa (japonica cultivar-group), mRNA 394 e-106
2ref|XM_507093.1| PREDICTED Oryza sativa (japonica cultivar-group... 394 e-106
3dbj|AK106557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 394 e-106
4dbj|AK102080.1| Oryza sativa (japonica cultivar-group) cDNA clon... 394 e-106
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 285 6e-74
6dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic D... 285 6e-74
7emb|BX537138.6| Zebrafish DNA sequence from clone DKEY-52L18 in ... 42 1.6
8emb|BX004889.8| Zebrafish DNA sequence from clone DKEY-65P15 in ... 42 1.6
9ref|NM_001031219.1| Gallus gallus RasGEF domain family, member 1... 40 6.3
10gb|AC145759.3| Microcebus murinus clone CH257-501B11, complete s... 40 6.3
11ref|XM_416232.1| PREDICTED: Gallus gallus similar to Rotavirus X... 40 6.3
12emb|Z67880.1|CEC34E7 Caenorhabditis elegans Cosmid C34E7, comple... 40 6.3
13gb|AC121988.2| Mus musculus BAC clone RP24-295B16 from 10, compl... 40 6.3
14ref|XM_646899.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 6.3
15gb|AC144766.18| Medicago truncatula clone mth2-17c2, complete se... 40 6.3
16emb|AL662906.4| Human DNA sequence from clone RP11-111I12 on chr... 40 6.3
17emb|AL603788.4| Human DNA sequence from clone RP11-211O7 on chro... 40 6.3
18emb|AL031176.8|HS124K22 Human DNA sequence from clone RP1-124K22... 40 6.3
19emb|AJ719758.1| Gallus gallus mRNA for hypothetical protein, clo... 40 6.3
20emb|BX004883.18| Zebrafish DNA sequence from clone CH211-152O9, ... 40 6.3
21gb|AC093499.2| Drosophila melanogaster 3L BAC RP98-18K24 (Roswel... 40 6.3
22gb|AC113250.3| Drosophila melanogaster 3L BAC RP98-6P13 (Roswell... 40 6.3
23ref|XM_683627.1| PREDICTED: Danio rerio similar to guanylyl cycl... 40 6.3
24emb|CR386175.1| Gallus gallus finished cDNA, clone ChEST98i15 40 6.3
25gb|AY154775.1| Ceratitis capitata clone Ccmar2.9 mariner transpo... 40 6.3
26gb|AE003529.3| Drosophila melanogaster chromosome 3L, section 56... 40 6.3
27gb|DP000022.1| Microcebus murinus target 1 genomic scaffold 40 6.3 
>ref|XM_479734.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2952

 Score =  394 bits (199), Expect = e-106
 Identities = 373/431 (86%)
 Strand = Plus / Plus

                                                                       
Query: 29  agggttgatggaagatttctcaccgagggctctgctcaatagtatctcgcaccttagtgc 88
           |||| |||||||| ||||||| |||||  | |||||||||||||||| ||   | | || 
Sbjct: 110 agggctgatggaaaatttctccccgagaaccctgctcaatagtatcttgcgtatcactgt 169

                                                                       
Query: 89  cttaacttctgatggctctactgcaaggcccaagcctattcagaagtactgccaaaatgt 148
           |||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 170 cttaacctccgatggctctactgcaaggcccaagcccattcagaagtactgccaaaatgt 229

                                                                       
Query: 149 atgcgatatatcaagcatcgtgagccctctcatagaagatatatgcaagtctcctgaaga 208
            || ||||| |||||||| ||||||||||||||||| ||| ||||  |||||||||||||
Sbjct: 230 gtgtgatatctcaagcattgtgagccctctcatagaggatctatgtgagtctcctgaaga 289

                                                                       
Query: 209 gcaactcgatgaggtgttaagggagcttgacattgctataaatgaagcttcagggcttat 268
           ||||||| ||||||||||||||||||||| || |||||| ||   |||||||||||||||
Sbjct: 290 gcaactcaatgaggtgttaagggagcttggcactgctattaacagagcttcagggcttat 349

                                                                       
Query: 269 tgggaactggcaccaaacgaccagcaaaatatattttgtttggcaaattgaatcagtgat 328
           |||||||||||| || || |||||||||||||||||| | ||||| ||||||||||| ||
Sbjct: 350 tgggaactggcaacagacaaccagcaaaatatattttatatggcagattgaatcagtaat 409

                                                                       
Query: 329 ctcagatattcagggatgctcccttcaattgtgtcagcttgctaattctttattaccttc 388
           ||||||||| |||||||| || || ||  |||| ||||||| ||| ||| ||||||||||
Sbjct: 410 ctcagatatccagggatgttctctacagctgtgccagcttgttaactctctattaccttc 469

                                                                       
Query: 389 tctgactggatgtgcttgcatttgtattcagaaactccaggacataaattatgagcacat 448
           | |||||||  |||| ||||  |||||| |||||||||| ||||||||||||||  ||||
Sbjct: 470 tttgactggccgtgcatgcacatgtattgagaaactccaagacataaattatgaaaacat 529

                      
Query: 449 gtttgatctgg 459
           |||||||||||
Sbjct: 530 gtttgatctgg 540
to top
>ref|XM_507093.1| PREDICTED Oryza sativa (japonica cultivar-group), P0007D08.34 mRNA
          Length = 2953

 Score =  394 bits (199), Expect = e-106
 Identities = 373/431 (86%)
 Strand = Plus / Plus

                                                                       
Query: 29  agggttgatggaagatttctcaccgagggctctgctcaatagtatctcgcaccttagtgc 88
           |||| |||||||| ||||||| |||||  | |||||||||||||||| ||   | | || 
Sbjct: 111 agggctgatggaaaatttctccccgagaaccctgctcaatagtatcttgcgtatcactgt 170

                                                                       
Query: 89  cttaacttctgatggctctactgcaaggcccaagcctattcagaagtactgccaaaatgt 148
           |||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 171 cttaacctccgatggctctactgcaaggcccaagcccattcagaagtactgccaaaatgt 230

                                                                       
Query: 149 atgcgatatatcaagcatcgtgagccctctcatagaagatatatgcaagtctcctgaaga 208
            || ||||| |||||||| ||||||||||||||||| ||| ||||  |||||||||||||
Sbjct: 231 gtgtgatatctcaagcattgtgagccctctcatagaggatctatgtgagtctcctgaaga 290

                                                                       
Query: 209 gcaactcgatgaggtgttaagggagcttgacattgctataaatgaagcttcagggcttat 268
           ||||||| ||||||||||||||||||||| || |||||| ||   |||||||||||||||
Sbjct: 291 gcaactcaatgaggtgttaagggagcttggcactgctattaacagagcttcagggcttat 350

                                                                       
Query: 269 tgggaactggcaccaaacgaccagcaaaatatattttgtttggcaaattgaatcagtgat 328
           |||||||||||| || || |||||||||||||||||| | ||||| ||||||||||| ||
Sbjct: 351 tgggaactggcaacagacaaccagcaaaatatattttatatggcagattgaatcagtaat 410

                                                                       
Query: 329 ctcagatattcagggatgctcccttcaattgtgtcagcttgctaattctttattaccttc 388
           ||||||||| |||||||| || || ||  |||| ||||||| ||| ||| ||||||||||
Sbjct: 411 ctcagatatccagggatgttctctacagctgtgccagcttgttaactctctattaccttc 470

                                                                       
Query: 389 tctgactggatgtgcttgcatttgtattcagaaactccaggacataaattatgagcacat 448
           | |||||||  |||| ||||  |||||| |||||||||| ||||||||||||||  ||||
Sbjct: 471 tttgactggccgtgcatgcacatgtattgagaaactccaagacataaattatgaaaacat 530

                      
Query: 449 gtttgatctgg 459
           |||||||||||
Sbjct: 531 gtttgatctgg 541
to top
>dbj|AK106557.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-109-A01, full
           insert sequence
          Length = 2952

 Score =  394 bits (199), Expect = e-106
 Identities = 373/431 (86%)
 Strand = Plus / Plus

                                                                       
Query: 29  agggttgatggaagatttctcaccgagggctctgctcaatagtatctcgcaccttagtgc 88
           |||| |||||||| ||||||| |||||  | |||||||||||||||| ||   | | || 
Sbjct: 110 agggctgatggaaaatttctccccgagaaccctgctcaatagtatcttgcgtatcactgt 169

                                                                       
Query: 89  cttaacttctgatggctctactgcaaggcccaagcctattcagaagtactgccaaaatgt 148
           |||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 170 cttaacctccgatggctctactgcaaggcccaagcccattcagaagtactgccaaaatgt 229

                                                                       
Query: 149 atgcgatatatcaagcatcgtgagccctctcatagaagatatatgcaagtctcctgaaga 208
            || ||||| |||||||| ||||||||||||||||| ||| ||||  |||||||||||||
Sbjct: 230 gtgtgatatctcaagcattgtgagccctctcatagaggatctatgtgagtctcctgaaga 289

                                                                       
Query: 209 gcaactcgatgaggtgttaagggagcttgacattgctataaatgaagcttcagggcttat 268
           ||||||| ||||||||||||||||||||| || |||||| ||   |||||||||||||||
Sbjct: 290 gcaactcaatgaggtgttaagggagcttggcactgctattaacagagcttcagggcttat 349

                                                                       
Query: 269 tgggaactggcaccaaacgaccagcaaaatatattttgtttggcaaattgaatcagtgat 328
           |||||||||||| || || |||||||||||||||||| | ||||| ||||||||||| ||
Sbjct: 350 tgggaactggcaacagacaaccagcaaaatatattttatatggcagattgaatcagtaat 409

                                                                       
Query: 329 ctcagatattcagggatgctcccttcaattgtgtcagcttgctaattctttattaccttc 388
           ||||||||| |||||||| || || ||  |||| ||||||| ||| ||| ||||||||||
Sbjct: 410 ctcagatatccagggatgttctctacagctgtgccagcttgttaactctctattaccttc 469

                                                                       
Query: 389 tctgactggatgtgcttgcatttgtattcagaaactccaggacataaattatgagcacat 448
           | |||||||  |||| ||||  |||||| |||||||||| ||||||||||||||  ||||
Sbjct: 470 tttgactggccgtgcatgcacatgtattgagaaactccaagacataaattatgaaaacat 529

                      
Query: 449 gtttgatctgg 459
           |||||||||||
Sbjct: 530 gtttgatctgg 540
to top
>dbj|AK102080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082K05, full
           insert sequence
          Length = 2953

 Score =  394 bits (199), Expect = e-106
 Identities = 373/431 (86%)
 Strand = Plus / Plus

                                                                       
Query: 29  agggttgatggaagatttctcaccgagggctctgctcaatagtatctcgcaccttagtgc 88
           |||| |||||||| ||||||| |||||  | |||||||||||||||| ||   | | || 
Sbjct: 111 agggctgatggaaaatttctccccgagaaccctgctcaatagtatcttgcgtatcactgt 170

                                                                       
Query: 89  cttaacttctgatggctctactgcaaggcccaagcctattcagaagtactgccaaaatgt 148
           |||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 171 cttaacctccgatggctctactgcaaggcccaagcccattcagaagtactgccaaaatgt 230

                                                                       
Query: 149 atgcgatatatcaagcatcgtgagccctctcatagaagatatatgcaagtctcctgaaga 208
            || ||||| |||||||| ||||||||||||||||| ||| ||||  |||||||||||||
Sbjct: 231 gtgtgatatctcaagcattgtgagccctctcatagaggatctatgtgagtctcctgaaga 290

                                                                       
Query: 209 gcaactcgatgaggtgttaagggagcttgacattgctataaatgaagcttcagggcttat 268
           ||||||| ||||||||||||||||||||| || |||||| ||   |||||||||||||||
Sbjct: 291 gcaactcaatgaggtgttaagggagcttggcactgctattaacagagcttcagggcttat 350

                                                                       
Query: 269 tgggaactggcaccaaacgaccagcaaaatatattttgtttggcaaattgaatcagtgat 328
           |||||||||||| || || |||||||||||||||||| | ||||| ||||||||||| ||
Sbjct: 351 tgggaactggcaacagacaaccagcaaaatatattttatatggcagattgaatcagtaat 410

                                                                       
Query: 329 ctcagatattcagggatgctcccttcaattgtgtcagcttgctaattctttattaccttc 388
           ||||||||| |||||||| || || ||  |||| ||||||| ||| ||| ||||||||||
Sbjct: 411 ctcagatatccagggatgttctctacagctgtgccagcttgttaactctctattaccttc 470

                                                                       
Query: 389 tctgactggatgtgcttgcatttgtattcagaaactccaggacataaattatgagcacat 448
           | |||||||  |||| ||||  |||||| |||||||||| ||||||||||||||  ||||
Sbjct: 471 tttgactggccgtgcatgcacatgtattgagaaactccaagacataaattatgaaaacat 530

                      
Query: 449 gtttgatctgg 459
           |||||||||||
Sbjct: 531 gtttgatctgg 541
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score =  285 bits (144), Expect = 6e-74
 Identities = 246/280 (87%)
 Strand = Plus / Plus

                                                                          
Query: 28     cagggttgatggaagatttctcaccgagggctctgctcaatagtatctcgcaccttagtg 87
              ||||| |||||||| ||||||| |||||  | |||||||||||||||| ||   | | ||
Sbjct: 546736 cagggctgatggaaaatttctccccgagaaccctgctcaatagtatcttgcgtatcactg 546795

                                                                          
Query: 88     ccttaacttctgatggctctactgcaaggcccaagcctattcagaagtactgccaaaatg 147
               |||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 546796 tcttaacctccgatggctctactgcaaggcccaagcccattcagaagtactgccaaaatg 546855

                                                                          
Query: 148    tatgcgatatatcaagcatcgtgagccctctcatagaagatatatgcaagtctcctgaag 207
              | || ||||| |||||||| ||||||||||||||||| ||| ||||  ||||||||||||
Sbjct: 546856 tgtgtgatatctcaagcattgtgagccctctcatagaggatctatgtgagtctcctgaag 546915

                                                                          
Query: 208    agcaactcgatgaggtgttaagggagcttgacattgctataaatgaagcttcagggctta 267
              |||||||| ||||||||||||||||||||| || |||||| ||   ||||||||||||||
Sbjct: 546916 agcaactcaatgaggtgttaagggagcttggcactgctattaacagagcttcagggctta 546975

                                                      
Query: 268    ttgggaactggcaccaaacgaccagcaaaatatattttgt 307
              ||||||||||||| || || ||||||||||||||||||||
Sbjct: 546976 ttgggaactggcaacagacaaccagcaaaatatattttgt 547015



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                          
Query: 309    tggcaaattgaatcagtgatctcagatattcagggatgctcccttcaattgtgtcagctt 368
              ||||| ||||||||||| ||||||||||| |||||||| || || ||  |||| ||||||
Sbjct: 547775 tggcagattgaatcagtaatctcagatatccagggatgttctctacagctgtgccagctt 547834

                                           
Query: 369    gctaattctttattaccttctctgactgg 397
              | ||| ||| ||||||||||| |||||||
Sbjct: 547835 gttaactctctattaccttctttgactgg 547863



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                        
Query: 418    agaaactccaggacataaattatgagcacatgtttgatctgg 459
              |||||||||| ||||||||||||||  |||||||||||||||
Sbjct: 548000 agaaactccaagacataaattatgaaaacatgtttgatctgg 548041
to top
>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0007D08
          Length = 183142

 Score =  285 bits (144), Expect = 6e-74
 Identities = 246/280 (87%)
 Strand = Plus / Plus

                                                                          
Query: 28     cagggttgatggaagatttctcaccgagggctctgctcaatagtatctcgcaccttagtg 87
              ||||| |||||||| ||||||| |||||  | |||||||||||||||| ||   | | ||
Sbjct: 136696 cagggctgatggaaaatttctccccgagaaccctgctcaatagtatcttgcgtatcactg 136755

                                                                          
Query: 88     ccttaacttctgatggctctactgcaaggcccaagcctattcagaagtactgccaaaatg 147
               |||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 136756 tcttaacctccgatggctctactgcaaggcccaagcccattcagaagtactgccaaaatg 136815

                                                                          
Query: 148    tatgcgatatatcaagcatcgtgagccctctcatagaagatatatgcaagtctcctgaag 207
              | || ||||| |||||||| ||||||||||||||||| ||| ||||  ||||||||||||
Sbjct: 136816 tgtgtgatatctcaagcattgtgagccctctcatagaggatctatgtgagtctcctgaag 136875

                                                                          
Query: 208    agcaactcgatgaggtgttaagggagcttgacattgctataaatgaagcttcagggctta 267
              |||||||| ||||||||||||||||||||| || |||||| ||   ||||||||||||||
Sbjct: 136876 agcaactcaatgaggtgttaagggagcttggcactgctattaacagagcttcagggctta 136935

                                                      
Query: 268    ttgggaactggcaccaaacgaccagcaaaatatattttgt 307
              ||||||||||||| || || ||||||||||||||||||||
Sbjct: 136936 ttgggaactggcaacagacaaccagcaaaatatattttgt 136975



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                          
Query: 309    tggcaaattgaatcagtgatctcagatattcagggatgctcccttcaattgtgtcagctt 368
              ||||| ||||||||||| ||||||||||| |||||||| || || ||  |||| ||||||
Sbjct: 137735 tggcagattgaatcagtaatctcagatatccagggatgttctctacagctgtgccagctt 137794

                                           
Query: 369    gctaattctttattaccttctctgactgg 397
              | ||| ||| ||||||||||| |||||||
Sbjct: 137795 gttaactctctattaccttctttgactgg 137823



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                        
Query: 418    agaaactccaggacataaattatgagcacatgtttgatctgg 459
              |||||||||| ||||||||||||||  |||||||||||||||
Sbjct: 137960 agaaactccaagacataaattatgaaaacatgtttgatctgg 138001
to top
>emb|BX537138.6| Zebrafish DNA sequence from clone DKEY-52L18 in linkage group 15,
             complete sequence
          Length = 144274

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 413   tattcagaaactccaggacat 433
             |||||||||||||||||||||
Sbjct: 34197 tattcagaaactccaggacat 34177
to top
>emb|BX004889.8| Zebrafish DNA sequence from clone DKEY-65P15 in linkage group 25,
             complete sequence
          Length = 253422

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 281   ccaaacgaccagcaaaatatatttt 305
             ||||| |||||||||||||||||||
Sbjct: 18759 ccaaaagaccagcaaaatatatttt 18783
to top
>ref|NM_001031219.1| Gallus gallus RasGEF domain family, member 1A (RASGEF1A), mRNA
          Length = 3371

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 391  tgactggatgtgcttgcatt 410
            ||||||||||||||||||||
Sbjct: 3311 tgactggatgtgcttgcatt 3330
to top
>gb|AC145759.3| Microcebus murinus clone CH257-501B11, complete sequence
          Length = 32674

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 338   tcagggatgctcccttcaat 357
             ||||||||||||||||||||
Sbjct: 31581 tcagggatgctcccttcaat 31600
to top
>ref|XM_416232.1| PREDICTED: Gallus gallus similar to Rotavirus X associated
           non-structural protein (RoXaN) (LOC417994), mRNA
          Length = 671

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 385 cttctctgactggatgtgct 404
           ||||||||||||||||||||
Sbjct: 303 cttctctgactggatgtgct 284
to top
>emb|Z67880.1|CEC34E7 Caenorhabditis elegans Cosmid C34E7, complete sequence
          Length = 27008

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 293  caaaatatattttgtttggcaaat 316
            ||||| ||||||||||||||||||
Sbjct: 8400 caaaacatattttgtttggcaaat 8423
to top
>gb|AC121988.2| Mus musculus BAC clone RP24-295B16 from 10, complete sequence
          Length = 154373

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 160   caagcatcgtgagccctctcatag 183
             |||||||| |||||||||||||||
Sbjct: 91718 caagcatcatgagccctctcatag 91695
to top
>ref|XM_646899.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (137.t00012)
           partial mRNA
          Length = 2139

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 372 aattctttattaccttctct 391
           ||||||||||||||||||||
Sbjct: 671 aattctttattaccttctct 652
to top
>gb|AC144766.18| Medicago truncatula clone mth2-17c2, complete sequence
          Length = 92099

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 294   aaaatatattttgtttggcaaatt 317
             |||||||||||||||||| |||||
Sbjct: 79996 aaaatatattttgtttggtaaatt 79973
to top
>emb|AL662906.4| Human DNA sequence from clone RP11-111I12 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 134028

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 292   gcaaaatatattttgtttggcaaa 315
             |||||| |||||||||||||||||
Sbjct: 52809 gcaaaacatattttgtttggcaaa 52832
to top
>emb|AL603788.4| Human DNA sequence from clone RP11-211O7 on chromosome 6 Contains the
             5' end of the PARK2 gene for Parkinson disease (autosomal
             recessive, juvenile) 2, parkin (PDJ, PRKN, AR-JP) and the
             5' end of the gene for a novel protein (FLJ32724).
             Contains a  CpG island, complete sequence
          Length = 29881

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 399   tgtgcttgcatttgtattcagaaa 422
             |||||||||||||||| |||||||
Sbjct: 24687 tgtgcttgcatttgtaatcagaaa 24710
to top
>emb|AL031176.8|HS124K22 Human DNA sequence from clone RP1-124K22 on chromosome Xq23, complete
             sequence
          Length = 108994

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   ccttcaattgtgtcagcttg 369
             ||||||||||||||||||||
Sbjct: 96307 ccttcaattgtgtcagcttg 96326
to top
>emb|AJ719758.1| Gallus gallus mRNA for hypothetical protein, clone 6c20
          Length = 3371

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 391  tgactggatgtgcttgcatt 410
            ||||||||||||||||||||
Sbjct: 3311 tgactggatgtgcttgcatt 3330
to top
>emb|BX004883.18| Zebrafish DNA sequence from clone CH211-152O9, complete sequence
          Length = 154146

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    atctcagatattcagggatg 346
              ||||||||||||||||||||
Sbjct: 109813 atctcagatattcagggatg 109832
to top
>gb|AC093499.2| Drosophila melanogaster 3L BAC RP98-18K24 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 169209

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   cagcaaaatatattttgttt 309
             ||||||||||||||||||||
Sbjct: 11999 cagcaaaatatattttgttt 12018
to top
>gb|AC113250.3| Drosophila melanogaster 3L BAC RP98-6P13 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 168299

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    cagcaaaatatattttgttt 309
              ||||||||||||||||||||
Sbjct: 154146 cagcaaaatatattttgttt 154165
to top
>ref|XM_683627.1| PREDICTED: Danio rerio similar to guanylyl cyclase-2 (LOC560233),
            mRNA
          Length = 1404

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 327  atctcagatattcagggatg 346
            ||||||||||||||||||||
Sbjct: 988  atctcagatattcagggatg 1007
to top
>emb|CR386175.1| Gallus gallus finished cDNA, clone ChEST98i15
          Length = 1301

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 359 gtgtcagcttgctaattctttatt 382
           ||||||||||||||||||| ||||
Sbjct: 605 gtgtcagcttgctaattctgtatt 628
to top
>gb|AY154775.1| Ceratitis capitata clone Ccmar2.9 mariner transposable element,
           complete sequence
          Length = 969

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 ccaaaatgtatgcgatatat 159
           ||||||||||||||||||||
Sbjct: 896 ccaaaatgtatgcgatatat 915
to top
>gb|AE003529.3| Drosophila melanogaster chromosome 3L, section 56 of 83 of the complete
              sequence
          Length = 252201

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    cagcaaaatatattttgttt 309
              ||||||||||||||||||||
Sbjct: 147984 cagcaaaatatattttgttt 148003
to top
>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold
          Length = 1595145

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 338     tcagggatgctcccttcaat 357
               ||||||||||||||||||||
Sbjct: 1594052 tcagggatgctcccttcaat 1594071


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,398,688
Number of Sequences: 3902068
Number of extensions: 4398688
Number of successful extensions: 88599
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88498
Number of HSP's gapped (non-prelim): 95
length of query: 469
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 447
effective length of database: 17,147,199,772
effective search space: 7664798298084
effective search space used: 7664798298084
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top