ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl46d08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 97.6 bits (49), Expect = 3e-17 Identities = 104/121 (85%), Gaps = 1/121 (0%) Strand = Plus / Plus Query: 343 agggcggcaagctcgccggcgtcaagaagatcatgattctcggcgctgggcccatcgcca 402 ||||||| | ||| ||||| || | |||||||||||| |||||||| || ||||||| | Sbjct: 21889106 agggcgggaggctggccggggtgaggaagatcatgatcctcggcgccggccccatcgtga 21889165 Query: 403 tcggccaggcgtgcgagttcgactactccggcacacaggcttgc-aggcgctcgtcgagg 461 |||| |||||||||||||||||||||||||| || ||||| ||| ||||||||| ||||| Sbjct: 21889166 tcgggcaggcgtgcgagttcgactactccgggacgcaggcgtgcaaggcgctcgccgagg 21889225 Query: 462 a 462 | Sbjct: 21889226 a 21889226 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 212 ctccctcctccccttcccgcgccgtcaccac 242 |||||||||||||||||| ||||| |||||| Sbjct: 21888978 ctccctcctccccttcccccgccgccaccac 21889008
>dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1114B07 Length = 148060 Score = 97.6 bits (49), Expect = 3e-17 Identities = 104/121 (85%), Gaps = 1/121 (0%) Strand = Plus / Plus Query: 343 agggcggcaagctcgccggcgtcaagaagatcatgattctcggcgctgggcccatcgcca 402 ||||||| | ||| ||||| || | |||||||||||| |||||||| || ||||||| | Sbjct: 118399 agggcgggaggctggccggggtgaggaagatcatgatcctcggcgccggccccatcgtga 118458 Query: 403 tcggccaggcgtgcgagttcgactactccggcacacaggcttgc-aggcgctcgtcgagg 461 |||| |||||||||||||||||||||||||| || ||||| ||| ||||||||| ||||| Sbjct: 118459 tcgggcaggcgtgcgagttcgactactccgggacgcaggcgtgcaaggcgctcgccgagg 118518 Query: 462 a 462 | Sbjct: 118519 a 118519 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 212 ctccctcctccccttcccgcgccgtcaccac 242 |||||||||||||||||| ||||| |||||| Sbjct: 118271 ctccctcctccccttcccccgccgccaccac 118301
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 382 tcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacagg 441 ||||||| || ||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 1390486 tcggcgccggccccatcgtcatcggccaggcgtgcgagttcgactactccggcacccagg 1390545 Query: 442 cttgca 447 | |||| Sbjct: 1390546 cgtgca 1390551 Score = 42.1 bits (21), Expect = 1.6 Identities = 51/61 (83%) Strand = Plus / Plus Query: 369 aagatcatgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactac 428 ||||||||||||||||||| || |||| | |||||||||| | ||||||||||||| Sbjct: 1392156 aagatcatgattctcggcggcggacccaaccggatcggccaggggatcgagttcgactac 1392215 Query: 429 t 429 | Sbjct: 1392216 t 1392216
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 376 tgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggca 435 ||||| ||||||| || |||||| |||||||||||||||||||||||||||||||||| Sbjct: 2401333 tgattatcggcgccggccccatcatcatcggccaggcgtgcgagttcgactactccggcg 2401274 Query: 436 cacaggcttgca 447 ||||||| |||| Sbjct: 2401273 cacaggcctgca 2401262
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 83.8 bits (42), Expect = 5e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 382 tcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacagg 441 ||||||| || ||||||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1988743 tcggcgccggccccatcgtcatcggccaggcgtgcgaattcgactactccggcacccagg 1988802 Query: 442 cttgca 447 | |||| Sbjct: 1988803 cgtgca 1988808 Score = 69.9 bits (35), Expect = 7e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 401 catcggccaggcgtgcgagttcgactactccggcacacaggcttgca 447 |||||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 724267 catcggccaggcttgcgagttcgactactccggcacccaggcctgca 724221 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 366 aagaagatcatgattctcggcg 387 |||||||||||||||||||||| Sbjct: 1990410 aagaagatcatgattctcggcg 1990431
>ref|XM_463327.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3279 Score = 81.8 bits (41), Expect = 2e-12 Identities = 78/89 (87%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 375 atgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggc 434 ||||| |||||||| || ||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1 atgatcctcggcgccggccccatcgtgatcgggcaggcgtgcgagttcgactactccggg 60 Query: 435 acacaggcttgc-aggcgctcgtcgagga 462 || ||||| ||| ||||||||| |||||| Sbjct: 61 acgcaggcgtgcaaggcgctcgccgagga 89
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 79.8 bits (40), Expect = 7e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 364 tcaagaagatcatgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcg 423 |||||||||||||||| | ||| | ||||| |||| |||||||||||| |||||||||| Sbjct: 1985380 tcaagaagatcatgatcgtgggctccgggccgatcgtcatcggccaggcctgcgagttcg 1985321 Query: 424 actactccggcacacaggcttgca 447 ||||||| ||||| ||||| |||| Sbjct: 1985320 actactcgggcacccaggcgtgca 1985297 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 393 cccatcgccatcggccaggcgtgcgagttcgactactccggcacacaggcttgca 447 ||||||| |||||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 4032041 cccatcgtcatcggccaggcctgcgagttcgactactccggcacgcaggcgtgca 4032095
>gb|AE012286.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 194 of 460 of the complete genome Length = 11290 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 382 tcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacagg 441 |||||||||| || |||| |||||||||||| ||||||||||||||||||||| | |||| Sbjct: 4879 tcggcgctggcccgatcgtcatcggccaggcctgcgagttcgactactccggcgcgcagg 4938 Query: 442 cttgca 447 | |||| Sbjct: 4939 cgtgca 4944
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 382 tcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacagg 441 |||||||||| || |||| |||||||||||| ||||||||||||||||||||| | |||| Sbjct: 2838883 tcggcgctggcccgatcgtcatcggccaggcctgcgagttcgactactccggcgcgcagg 2838824 Query: 442 cttgca 447 | |||| Sbjct: 2838823 cgtgca 2838818
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 390 gggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacaggc 442 ||||| |||| ||||||||||||||||||||||||||||||||| || ||||| Sbjct: 1557004 gggccgatcgtcatcggccaggcgtgcgagttcgactactccgggactcaggc 1557056
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 73.8 bits (37), Expect = 4e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 382 tcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacagg 441 ||||| |||| || |||| |||||||||||||||||||||||||||||| ||||| |||| Sbjct: 1135395 tcggctctggtccgatcgtcatcggccaggcgtgcgagttcgactactcgggcacccagg 1135454 Query: 442 c 442 | Sbjct: 1135455 c 1135455
>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13 Length = 348264 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 390 gggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacaggc 442 ||||| |||| ||||||||||||||||||||||||||||||||| || ||||| Sbjct: 174103 gggccgatcgtcatcggccaggcgtgcgagttcgactactccgggactcaggc 174155
>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 5/14 Length = 299450 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 390 gggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacaggc 442 ||||| |||| ||||||||||||||||||||||||||||||||| || ||||| Sbjct: 239225 gggccgatcgtcatcggccaggcgtgcgagttcgactactccgggactcaggc 239277
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 376 tgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggca 435 ||||||||||||| || ||||||| ||||||||||| || || ||||||||||||||| Sbjct: 5071928 tgattctcggcgccggccccatcgtgatcggccaggcctgtgaattcgactactccggcg 5071869 Query: 436 cacaggcttgca 447 | |||||||||| Sbjct: 5071868 cccaggcttgca 5071857
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 376 tgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggca 435 ||||||| |||||||| || |||| ||||||||||| ||||| ||||||||||||||| Sbjct: 960252 tgattcttggcgctggcccgatcgtgatcggccaggcttgcgaattcgactactccggcg 960311 Query: 436 cacaggcttgca 447 | |||||||||| Sbjct: 960312 cccaggcttgca 960323
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 376 tgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggc 434 |||||||||||||||| || |||| ||||||||||| ||||| ||||||||||||||| Sbjct: 900626 tgattctcggcgctggcccgatcgttatcggccaggcctgcgaattcgactactccggc 900684
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 69.9 bits (35), Expect = 7e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 396 atcgccatcggccaggcgtgcgagttcgactactccggcacacaggc 442 |||| |||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 3833404 atcgtcatcggccaggcctgcgagttcgactactccggcacccaggc 3833358
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 376 tgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggc 434 |||||||||||||||| || |||| ||||||||||| ||||| ||||||||||||||| Sbjct: 5371894 tgattctcggcgctggcccgatcgtgatcggccaggcctgcgaattcgactactccggc 5371836
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 382 tcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacagg 441 ||||||| || || |||| |||||||||||| ||||||||||||||||||||| | |||| Sbjct: 2155075 tcggcgccggcccgatcgtcatcggccaggcctgcgagttcgactactccggcgcgcagg 2155134 Query: 442 cttgca 447 | |||| Sbjct: 2155135 cgtgca 2155140
>emb|AL591787.1|SME591787 Sinorhizobium meliloti 1021 complete chromosome; segment 6/12 Length = 329100 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 382 tcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacagg 441 ||||||| ||||| |||| |||||| ||||| ||||| ||||||||||||||||| |||| Sbjct: 259963 tcggcgcggggccgatcgtcatcggtcaggcatgcgaattcgactactccggcacccagg 259904 Query: 442 cttgca 447 | |||| Sbjct: 259903 cgtgca 259898
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 382 tcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacagg 441 ||||||| || || |||| |||||||||||| ||||||||||||||||||||| | |||| Sbjct: 3094675 tcggcgccggcccgatcgtcatcggccaggcctgcgagttcgactactccggcgcgcagg 3094616 Query: 442 cttgca 447 | |||| Sbjct: 3094615 cgtgca 3094610
>gb|AE011819.1| Xanthomonas axonopodis pv. citri str. 306, section 197 of 469 of the complete genome Length = 11660 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 382 tcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacagg 441 ||||||| || || |||| |||||||||||| ||||||||||||||||||||| | |||| Sbjct: 5129 tcggcgccggcccgatcgtcatcggccaggcctgcgagttcgactactccggcgcgcagg 5188 Query: 442 cttgca 447 | |||| Sbjct: 5189 cgtgca 5194
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 401 catcggccaggcgtgcgagttcgactactccggcacacaggc 442 |||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 203038 catcgggcaggcctgcgagttcgactactccggcacacaggc 202997
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 382 tcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacagg 441 ||||||| || || |||| |||||||||||| ||||||||||||||||||||| | |||| Sbjct: 3101899 tcggcgccggcccgatcgtcatcggccaggcctgcgagttcgactactccggcgcgcagg 3101840 Query: 442 cttgca 447 | |||| Sbjct: 3101839 cgtgca 3101834
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 371 gatcatgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactc 430 |||| ||||| ||||||| || ||||| | |||||||||||| ||||| |||||||| || Sbjct: 1443635 gatcctgattatcggcgcgggccccattgtcatcggccaggcttgcgaattcgactattc 1443694 Query: 431 cggcacacaggcttgca 447 |||||| ||||| |||| Sbjct: 1443695 cggcactcaggcctgca 1443711
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 390 gggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacaggc 442 ||||| |||| |||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1234814 gggccgatcgtcatcggccaggcgtgcgaattcgactactcgggcactcaggc 1234866
>gb|AE009494.1| Brucella melitensis 16M chromosome I, section 51 of 195 of the complete sequence Length = 10029 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 371 gatcatgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactc 430 |||| ||||| ||||||| || ||||| | |||||||||||| ||||| |||||||| || Sbjct: 7192 gatcctgattatcggcgcgggccccattgtcatcggccaggcttgcgaattcgactattc 7133 Query: 431 cggcacacaggcttgca 447 |||||| ||||| |||| Sbjct: 7132 cggcactcaggcctgca 7116
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 371 gatcatgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactc 430 |||| ||||| ||||||| || ||||| | |||||||||||| ||||| |||||||| || Sbjct: 1461698 gatcctgattatcggcgcgggccccattgtcatcggccaggcttgcgaattcgactattc 1461757 Query: 431 cggcacacaggcttgca 447 |||||| ||||| |||| Sbjct: 1461758 cggcactcaggcctgca 1461774
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 371 gatcatgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactc 430 |||| ||||| ||||||| || ||||| | |||||||||||| ||||| |||||||| || Sbjct: 1458852 gatcctgattatcggcgcgggccccattgtcatcggccaggcttgcgaattcgactattc 1458911 Query: 431 cggcacacaggcttgca 447 |||||| ||||| |||| Sbjct: 1458912 cggcactcaggcctgca 1458928
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 376 tgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggca 435 ||||||||||||| || ||||||| ||||||||||| || || ||||||||||||||| Sbjct: 4986886 tgattctcggcgccggccccatcgtgatcggccaggcctgtgaattcgactactccggcg 4986827 Query: 436 cacaggcttgca 447 | ||||| |||| Sbjct: 4986826 cccaggcctgca 4986815
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 384 ggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacaggct 443 ||||| || ||||||| |||||||||||| || |||||||||||||||||| | ||||| Sbjct: 1989833 ggcgccggccccatcgtcatcggccaggcctgtgagttcgactactccggcgcccaggcc 1989774 Query: 444 tgca 447 |||| Sbjct: 1989773 tgca 1989770
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 396 atcgccatcggccaggcgtgcgagttcgactactccggcacacaggcttgca 447 |||| |||||||||||| ||||||||||||||||||||| | ||||| |||| Sbjct: 4101587 atcgtcatcggccaggcctgcgagttcgactactccggcgcccaggcctgca 4101536 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 ccaagggcggcaagctcgccggcg 363 ||||| |||||||||||||||||| Sbjct: 340626 ccaagagcggcaagctcgccggcg 340649
>gb|AC168047.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940115D9, complete sequence Length = 108001 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 384 ggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggc 434 ||||| || ||||||| |||||||||||| |||||||| |||||||||||| Sbjct: 50687 ggcgccggtcccatcgtcatcggccaggcctgcgagtttgactactccggc 50737
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 401 catcggccaggcgtgcgagttcgactactccggcacacaggcttgca 447 ||||||||||||||||||||||||||| || ||| | |||||||||| Sbjct: 1391660 catcggccaggcgtgcgagttcgactattcgggcgcgcaggcttgca 1391706
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 401 catcggccaggcgtgcgagttcgactactccggcacacaggcttgca 447 |||||||||||||||||||||||||||||| ||| | ||||| |||| Sbjct: 803819 catcggccaggcgtgcgagttcgactactcgggcgcgcaggcatgca 803865
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 401 catcggccaggcgtgcgagttcgactactccggcacacaggcttgca 447 |||||||||||||||||||||||||||||| ||| | ||||| |||| Sbjct: 1690538 catcggccaggcgtgcgagttcgactactcgggcgcgcaggcatgca 1690584
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 401 catcggccaggcgtgcgagttcgactactccggcacacaggcttgca 447 |||||||||||||||||||||||||||||| ||| | ||||| |||| Sbjct: 3532610 catcggccaggcgtgcgagttcgactactcgggcgcgcaggcatgca 3532564
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 401 catcggccaggcgtgcgagttcgactactccggcacacaggcttgca 447 |||||||||||||||||||||||||||||| ||| | ||||| |||| Sbjct: 1577251 catcggccaggcgtgcgagttcgactactcgggcgcgcaggcatgca 1577297
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 376 tgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggc 434 |||||||||||||||| || |||| ||||||||||| ||||| |||||||| |||||| Sbjct: 811457 tgattctcggcgctggcccgatcgtgatcggccaggcctgcgaattcgactattccggc 811515
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 382 tcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacagg 441 ||||||| |||||||||| |||||| ||||||||||| ||||| || |||||| | |||| Sbjct: 3438976 tcggcgccgggcccatcgtcatcgggcaggcgtgcgaattcgattattccggcgcccagg 3438917 Query: 442 cttgca 447 | |||| Sbjct: 3438916 cctgca 3438911
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 405 ggccaggcgtgcgagttcgactactccggcacacaggc 442 |||||||| ||||||||||||||||||||||| ||||| Sbjct: 1209026 ggccaggcctgcgagttcgactactccggcacccaggc 1208989
>emb|BX927152.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 5/10 Length = 349799 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 393 cccatcgccatcggccaggcgtgcgagttcgactactccggcacacaggcttgc 446 ||||||| ||| |||||||| || || ||||||||||||||||| ||||||||| Sbjct: 313425 cccatcgtcattggccaggcatgtgaattcgactactccggcacccaggcttgc 313372
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 381 ctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactc 430 |||||| | ||||| |||| ||||||||||||||||||||||||||||| Sbjct: 3792112 ctcggctccgggccgatcgtgatcggccaggcgtgcgagttcgactactc 3792063
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 382 tcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacagg 441 ||||||| || || |||| |||||| ||||| ||||||||||||||||||||| | |||| Sbjct: 1182390 tcggcgcgggcccgatcgtcatcgggcaggcctgcgagttcgactactccggcgcgcagg 1182449 Query: 442 cttgca 447 | |||| Sbjct: 1182450 cgtgca 1182455
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 393 cccatcgccatcggccaggcgtgcgagttcgactactccggcacacaggcttgc 446 ||||||| ||| |||||||| || || ||||||||||||||||| ||||||||| Sbjct: 1707649 cccatcgtcattggccaggcatgtgaattcgactactccggcacccaggcttgc 1707596
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 371 gatcatgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactc 430 ||||||||| |||| || || |||||| |||||||||||| |||||||||||||| || Sbjct: 2560526 gatcatgatcatcggggcgggtcccatcatcatcggccaggcctgcgagttcgactattc 2560585 Query: 431 cggcacacaggcttgca 447 |||| | ||||| |||| Sbjct: 2560586 cggcgcccaggcctgca 2560602
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 401 catcggccaggcgtgcgagttcgactactccgg 433 ||||||||||||||||||||||||||| ||||| Sbjct: 2851030 catcggccaggcgtgcgagttcgactattccgg 2851062
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 390 gggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacaggc 442 |||||||||| ||||||||||||| |||||||||||| ||||||| ||||| Sbjct: 1334585 gggcccatcgtcatcggccaggcggcggagttcgactacgccggcacccaggc 1334637
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 376 tgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggca 435 ||||||||||||| || || |||| ||||||||||| || || ||||||||||||||| Sbjct: 4791394 tgattctcggcgccggccctatcgtgatcggccaggcctgtgaattcgactactccggcg 4791335 Query: 436 cacaggcttgca 447 | ||||| |||| Sbjct: 4791334 cccaggcctgca 4791323
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 401 catcggccaggcgtgcgagttcgactactccggcacacaggcttgca 447 |||||| ||||||||||| ||||||||||||||| | ||||| |||| Sbjct: 2404033 catcggtcaggcgtgcgaattcgactactccggcgcgcaggcctgca 2403987
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 396 atcgccatcggccaggcgtgcgagttcgactactccggcacacaggc 442 |||| |||||||||||| ||||||||||||||||||||| ||||| Sbjct: 45361 atcgtcatcggccaggccgccgagttcgactactccggcacccaggc 45315
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 390 gggcccatcgccatcggccaggcgtgcgagttcgactactccggcac 436 ||||| |||| ||| ||||| || ||||||||||||||||||||||| Sbjct: 1758102 gggccgatcgtcattggccaagcctgcgagttcgactactccggcac 1758056
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 396 atcgccatcggccaggcgtgcgagttcgactactccggcacacaggc 442 |||| |||||||||||| ||||||||||||||||||||| ||||| Sbjct: 8194308 atcgtcatcggccaggccgccgagttcgactactccggcacccaggc 8194354 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 cgccacttcgccgctgagcc 337 |||||||||||||||||||| Sbjct: 6820647 cgccacttcgccgctgagcc 6820666
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 393 cccatcgccatcggccaggcgtgcgagttcgactactccggcacacaggcttgca 447 ||||||| ||| |||||||| |||||||||||||| ||||| || ||||| |||| Sbjct: 2041179 cccatcgtcattggccaggcctgcgagttcgactattccggaacccaggcctgca 2041233
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 401 catcggccaggcgtgcgagttcgacta 427 ||||||||||||||||||||||||||| Sbjct: 3196387 catcggccaggcgtgcgagttcgacta 3196361
>gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome Length = 1197687 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 405 ggccaggcgtgcgagttcgactactccggcacacaggcttgca 447 |||||||| ||||||||||||||||| ||||| ||||| |||| Sbjct: 853829 ggccaggcatgcgagttcgactactctggcactcaggcctgca 853871
>gb|AY280693.1| Paraplatypeza atra CAD (r) gene, partial cds Length = 3926 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 400 ccatcggccaggcgtgcgagttcgactactccgg 433 ||||||||||||| ||||||||||||||||||| Sbjct: 1067 ccatcggccaggccggcgagttcgactactccgg 1100
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 401 catcggccaggcgtgcgagttcgactactccggc 434 |||||||||||| ||||||||||| ||||||||| Sbjct: 2820146 catcggccaggcctgcgagttcgattactccggc 2820113 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 ccatcgccatcggccaggcg 413 |||||||||||||||||||| Sbjct: 3657803 ccatcgccatcggccaggcg 3657822
>emb|AJ431666.1|HEU431666 Halomonas eurihalina dapB gene (partial), carA gene and carB gene, strain F2-7 Length = 4965 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 382 tcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacagg 441 ||||||| || ||||||| |||||||||||| || || |||||||| |||||| | |||| Sbjct: 1772 tcggcgcaggccccatcgtcatcggccaggcctgtgaattcgactattccggcgcccagg 1831 Query: 442 cttgca 447 | |||| Sbjct: 1832 cctgca 1837
>gb|AE005954.1| Caulobacter crescentus CB15 section 280 of 359 of the complete genome Length = 10098 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 382 tcggcgctgggcccatcgccatcggccaggcgtgcgagttcgacta 427 ||||||| ||||| |||| |||||| ||||| |||||||||||||| Sbjct: 7279 tcggcgcggggccgatcgtcatcggtcaggcctgcgagttcgacta 7234
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Plus Query: 382 tcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacagg 441 ||||||| || || |||| |||||| ||||| || ||||||||||| |||||||| |||| Sbjct: 2672539 tcggcgccggtccgatcgtcatcggacaggcctgtgagttcgactattccggcacccagg 2672598 Query: 442 c 442 | Sbjct: 2672599 c 2672599
>emb|Y11467.1|TT11467 T.thermophilus yqhj gene partial, ORF1, carB gene, yaaq gene and ORF2 partial Length = 5836 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 390 gggcccatcgccatcggccaggcgtgcgagttcgactactc 430 ||||||||| |||||||||||||| |||||| |||||||| Sbjct: 1712 gggcccatcaccatcggccaggcggccgagtttgactactc 1752
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16 Length = 349841 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 402 atcggccaggcgtgcgagttcgactactccggcacacaggc 442 ||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 71510 atcggccaggcctgcgaattcgactattccggcacgcaggc 71550
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 402 atcggccaggcgtgcgagttcgactactccggcacacaggc 442 ||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 4264567 atcggccaggcctgcgaattcgactattccggcacccaggc 4264607
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 382 tcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggc 434 ||||||| || || |||| |||||| ||||| |||||||||||||| |||||| Sbjct: 757514 tcggcgccggtccgatcgtcatcggacaggcctgcgagttcgactattccggc 757566
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Minus Query: 382 tcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacagg 441 ||||||| ||||| ||| |||||||||||| ||||||||||| || || ||||| |||| Sbjct: 2373279 tcggcgccgggccgatcatcatcggccaggcttgcgagttcgattattcgggcacgcagg 2373220 Query: 442 c 442 | Sbjct: 2373219 c 2373219
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 402 atcggccaggcgtgcgagttcgactactccggcacacaggc 442 ||||||||||| ||||||||||| || |||||||| ||||| Sbjct: 1177781 atcggccaggcctgcgagttcgattattccggcacgcaggc 1177821
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 390 gggcccatcgccatcggccaggcgtgcgagttcgactactc 430 ||||||||| |||||||||||||| |||||| |||||||| Sbjct: 582281 gggcccatcaccatcggccaggcggccgagtttgactactc 582241 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 ccgcccgctccgcctcctcca 285 ||||||||||||||||||||| Sbjct: 433029 ccgcccgctccgcctcctcca 433009
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Plus Query: 382 tcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggcacacagg 441 ||||||| || ||||||| ||||| ||||| |||||||||||||| || ||||| |||| Sbjct: 8114083 tcggcgccggtcccatcgtgatcggacaggcctgcgagttcgactattcgggcacgcagg 8114142 Query: 442 c 442 | Sbjct: 8114143 c 8114143
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 402 atcggccaggcgtgcgagttcgactactccggcacacaggc 442 ||||| ||||| |||||||||||||| |||||||| ||||| Sbjct: 1171184 atcgggcaggcctgcgagttcgactattccggcacccaggc 1171224
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 390 gggcccatcgccatcggccaggcgtgcgagttcgactactc 430 ||||||||| |||||||||||||| |||||| |||||||| Sbjct: 236264 gggcccatcaccatcggccaggcggccgagtttgactactc 236224 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 ccgcccgctccgcctcctcca 285 ||||||||||||||||||||| Sbjct: 82708 ccgcccgctccgcctcctcca 82688
>emb|BX571662.1| Wolinella succinogenes, complete genome; segment 6/7 Length = 349859 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Minus Query: 401 catcggccaggcgtgcgagttcgactactccggcac 436 |||||| |||||||||||||| |||||||| ||||| Sbjct: 289007 catcggtcaggcgtgcgagtttgactactcaggcac 288972
>gb|AE004889.1| Pseudomonas aeruginosa PAO1, section 450 of 529 of the complete genome Length = 11415 Score = 48.1 bits (24), Expect = 0.026 Identities = 60/72 (83%) Strand = Plus / Minus Query: 376 tgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggca 435 |||| ||||| || || ||||||| || |||||||| ||||| ||||||||||||||| Sbjct: 5284 tgatcctcggtgccggccccatcgtgattggccaggcctgcgaattcgactactccggcg 5225 Query: 436 cacaggcttgca 447 | ||||| |||| Sbjct: 5224 cccaggcctgca 5213
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Minus Query: 396 atcgccatcggccaggcgtgcgagttcgactactccggcacacaggcttgca 447 |||| |||||| ||||| ||||| |||||||||||||| || ||||| |||| Sbjct: 1879842 atcgtcatcggtcaggcctgcgaattcgactactccggaacccaggcctgca 1879791
>gb|U81259.1|PAU81259 Pseudomonas aeruginosa dihydrodipicolinate reductase (dapB) gene, partial cds, carbamoylphosphate synthetase small subunit (carA) and carbamoylphosphate synthetase large subunit (carB) genes, complete cds, and FtsJ homolog (ftsJ) gene, partial cds Length = 7285 Score = 48.1 bits (24), Expect = 0.026 Identities = 60/72 (83%) Strand = Plus / Plus Query: 376 tgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggca 435 |||| ||||| || || ||||||| || |||||||| ||||| ||||||||||||||| Sbjct: 2437 tgatcctcggtgccggccccatcgtgattggccaggcctgcgaattcgactactccggcg 2496 Query: 436 cacaggcttgca 447 | ||||| |||| Sbjct: 2497 cccaggcctgca 2508
>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0004E08, complete sequence Length = 158294 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 212 ctccctcctccccttcccgcgccgtcaccac 242 |||||||||||||||||| ||||| |||||| Sbjct: 65485 ctccctcctccccttcccccgccgccaccac 65515
>gb|AC135598.4| Oryza sativa chromosome 3 BAC OSJNBb0021K20 genomic sequence, complete sequence Length = 137220 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 212 ctccctcctccccttcccgcgccgtcaccac 242 |||||||||||||||||| ||||||||||| Sbjct: 111353 ctccctcctccccttcccctgccgtcaccac 111383
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 212 ctccctcctccccttcccgcgccgtcaccac 242 |||||||||||||||||| ||||||||||| Sbjct: 17388976 ctccctcctccccttcccctgccgtcaccac 17389006
>emb|X73308.1|BCPYR B.caldolyticus pyrimidine biosynthesis genes Length = 10932 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 390 gggcccatcgccatcggccaggcgtgcgagttcgactac 428 ||||| |||| ||||||||||||| ||||||||||||| Sbjct: 3703 gggccgatcgtcatcggccaggcggccgagttcgactac 3741
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 catcggccaggcgtgcgagttcgacta 427 |||||||||||| |||||||||||||| Sbjct: 153356 catcggccaggcctgcgagttcgacta 153382
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 catcggccaggcgtgcgagttcgacta 427 |||||||||||| |||||||||||||| Sbjct: 265801 catcggccaggcctgcgagttcgacta 265827
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 catcggccaggcgtgcgagttcgacta 427 |||||||||||| |||||||||||||| Sbjct: 140630 catcggccaggcctgcgagttcgacta 140656
>emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0054B09, complete sequence Length = 146506 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 212 ctccctcctccccttcccgcgccgtcaccac 242 |||||||||||||||||| ||||| |||||| Sbjct: 68899 ctccctcctccccttcccccgccgccaccac 68929
>emb|AJ001805.1|BSAJ1805 Bacillus stearothermophilus pyrAb gene Length = 3292 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 390 gggcccatcgccatcggccaggcgtgcgagttcgactac 428 ||||| |||| ||||||||||||| ||||||||||||| Sbjct: 110 gggccgatcgtcatcggccaggcggccgagttcgactac 148
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Plus Query: 376 tgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactccggc 434 |||| ||||||||||| || |||| |||||||| || || |||||||| ||||||||| Sbjct: 740949 tgatcctcggcgctggtcctatcgttatcggccaagcctgtgagttcgattactccggc 741007
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 212 ctccctcctccccttcccgcgccgtcaccac 242 |||||||||||||||||| ||||| |||||| Sbjct: 14231134 ctccctcctccccttcccccgccgccaccac 14231164 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 204 ctcctccgctccctcctccccttcc 228 ||||||| ||||||||||||||||| Sbjct: 12226457 ctcctcctctccctcctccccttcc 12226433 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 gggcggcaagctcgccggcg 363 |||||||||||||||||||| Sbjct: 10012574 gggcggcaagctcgccggcg 10012555
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 212 ctccctcctccccttcccgcgccgtcaccac 242 |||||||||||||||||| ||||| |||||| Sbjct: 3474356 ctccctcctccccttcccccgccgccaccac 3474386 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 gggcggcaagctcgccggcg 363 |||||||||||||||||||| Sbjct: 3307984 gggcggcaagctcgccggcg 3308003
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 212 ctccctcctccccttcccgcgccgtcaccac 242 |||||||||||||||||| ||||||||||| Sbjct: 17382517 ctccctcctccccttcccctgccgtcaccac 17382547
>ref|XM_575914.1| PREDICTED: Rattus norvegicus similar to mKIAA1522 protein (LOC500552), mRNA Length = 3789 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 197 caccgtgctcctccgctccctcc 219 ||||||||||||||||||||||| Sbjct: 493 caccgtgctcctccgctccctcc 471
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 390 gggcccatcgccatcggccaggcgtgcgagttcgactac 428 ||||| |||| ||||||||||||| ||||||||||||| Sbjct: 1170995 gggccgatcgtcatcggccaggcggccgagttcgactac 1171033
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 420 ttcgactactccggcacacaggc 442 ||||||||||||||||||||||| Sbjct: 1823811 ttcgactactccggcacacaggc 1823789
>gb|AF191301.1|AF191301 Medicago sativa carbamoyl-phosphate synthase subunit A (carA) and ADP-forming, carbamate-phosphorylating (carB) genes, complete cds Length = 5330 Score = 46.1 bits (23), Expect = 0.10 Identities = 47/55 (85%) Strand = Plus / Plus Query: 376 tgattctcggcgctgggcccatcgccatcggccaggcgtgcgagttcgactactc 430 |||||||||||||||| || || | ||||||||||| || ||||| |||||||| Sbjct: 1412 tgattctcggcgctggcccgattgttatcggccaggcttgtgagtttgactactc 1466
>dbj|AK110135.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-D01, full insert sequence Length = 3774 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 400 ccatcggccaggcgtgcgagttcgactactccggc 434 ||||||| ||||| |||||||||||||||||||| Sbjct: 484 ccatcggtcaggccggcgagttcgactactccggc 518
>dbj|AK107232.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-E05, full insert sequence Length = 1019 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 212 ctccctcctccccttcccgcgccgtcaccac 242 |||||||||||||||||| ||||||||||| Sbjct: 336 ctccctcctccccttcccctgccgtcaccac 306
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 401 catcggccaggcgtgcgagttcgactactccggcacacaggcttgca 447 ||||||||||||||| || ||||| ||||||||| | ||||| |||| Sbjct: 1623043 catcggccaggcgtgtgaattcgattactccggcgcgcaggcctgca 1623089
>dbj|AK063543.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-C12, full insert sequence Length = 723 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 212 ctccctcctccccttcccgcgccgtcaccac 242 |||||||||||||||||| ||||||||||| Sbjct: 324 ctccctcctccccttcccctgccgtcaccac 354
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 212 ctccctcctccccttcccgcgccgtcaccac 242 |||||||||||||||||| ||||| |||||| Sbjct: 3474277 ctccctcctccccttcccccgccgccaccac 3474307 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 gggcggcaagctcgccggcg 363 |||||||||||||||||||| Sbjct: 3307905 gggcggcaagctcgccggcg 3307924
>ref|NM_102730.1| Arabidopsis thaliana CARB (CARBAMOYL PHOSPHATE SYNTHETASE B); ATP binding / carbamoyl-phosphate synthase/ ligase AT1G29900 (CARB) mRNA, complete cds Length = 3909 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 366 aagaagatcatgattctcggcgctgg 391 |||||||| ||||||||||||||||| Sbjct: 405 aagaagattatgattctcggcgctgg 430
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 401 catcggccaggcgtgcgagttcgactactccggcacacaggc 442 |||||| ||||| ||||| |||||||||||||| || ||||| Sbjct: 319912 catcggacaggcctgcgaattcgactactccggaactcaggc 319953
>gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0537C11, complete sequence Length = 146677 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 213 tccctcctccccttcccgcgccgtcaccac 242 ||||||||||||||||| ||||| |||||| Sbjct: 117673 tccctcctccccttcccccgccgccaccac 117702
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 402 atcggccaggcgtgcgagttcgacta 427 ||||| |||||||||||||||||||| Sbjct: 1009964 atcggtcaggcgtgcgagttcgacta 1009989
>gb|AC117250.3| Mus musculus BAC clone RP24-366A20 from 12, complete sequence Length = 125733 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 204 ctcctccgctccctcctccccttccc 229 ||||||||||||||||||||| |||| Sbjct: 78167 ctcctccgctccctcctccccatccc 78142
>emb|AL713888.10| Human DNA sequence from clone RP11-524O24 on chromosome 10 Contains the SLC25A16 gene for member 16 solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), a ribosomal protein L26 (RPL26) pseudogene, a novel pseudogene, the 5' end of the gene for leukemia-associated protein with a CXXC domain (LCX) and two CpG islands, complete sequence Length = 141221 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 204 ctcctccgctccctcctccccttccc 229 ||||||| |||||||||||||||||| Sbjct: 13747 ctcctcccctccctcctccccttccc 13722
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 401 catcggccaggcgtgcgagttcgactactccggc 434 |||||| ||||| ||||| ||||||||||||||| Sbjct: 1018687 catcggtcaggcctgcgaattcgactactccggc 1018720
>gb|AY133548.1| Arabidopsis thaliana At1g29900/F1N18_6 mRNA, complete cds Length = 3564 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 366 aagaagatcatgattctcggcgctgg 391 |||||||| ||||||||||||||||| Sbjct: 295 aagaagattatgattctcggcgctgg 320
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 401 catcggccaggcgtgcgagttcgactactc 430 |||||||||||| |||||||| |||||||| Sbjct: 2161695 catcggccaggcttgcgagtttgactactc 2161724
>dbj|AK137667.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930017K21 product:MAM domain containing 1, full insert sequence Length = 4453 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 204 ctcctccgctccctcctccccttccc 229 ||||||||||||||||||||| |||| Sbjct: 638 ctcctccgctccctcctccccatccc 663
>dbj|AK038962.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230079E18 product:hypothetical protein, full insert sequence Length = 1668 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 204 ctcctccgctccctcctccccttccc 229 ||||||||||||||||||||| |||| Sbjct: 472 ctcctccgctccctcctccccatccc 497
>gb|AF367268.1|AF367268 Arabidopsis thaliana At1g29900/F1N18_6 mRNA, complete cds Length = 3909 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 366 aagaagatcatgattctcggcgctgg 391 |||||||| ||||||||||||||||| Sbjct: 405 aagaagattatgattctcggcgctgg 430
>dbj|AK034513.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330209L04 product:unclassifiable, full insert sequence Length = 3241 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 204 ctcctccgctccctcctccccttccc 229 ||||||||||||||||||||| |||| Sbjct: 630 ctcctccgctccctcctccccatccc 655
>gb|AC145765.2| Gasterosteus aculeatus clone CH213-7I21, complete sequence Length = 209087 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 260 cctctccgcccgctccgcctcctcca 285 ||||| |||||||||||||||||||| Sbjct: 72089 cctctgcgcccgctccgcctcctcca 72064
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 213 tccctcctccccttcccgcgccgtcaccac 242 ||||||||||||||||| ||||| |||||| Sbjct: 9345728 tccctcctccccttcccccgccgccaccac 9345757
>emb|AL928985.24| Mouse DNA sequence from clone RP23-477P11 on chromosome 2, complete sequence Length = 83772 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 202 tgctcctccgctccctcctccccttc 227 ||||||||| |||||||||||||||| Sbjct: 79631 tgctcctcccctccctcctccccttc 79656
>emb|BX841804.1|CNS09Y5V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB86ZF03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1023 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 366 aagaagatcatgattctcggcgctgg 391 |||||||| ||||||||||||||||| Sbjct: 383 aagaagattatgattctcggcgctgg 408
>gb|AC008030.4|AC008030 Arabidopsis thaliana chromosome I BAC F1N18 genomic sequence, complete sequence Length = 101075 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 366 aagaagatcatgattctcggcgctgg 391 |||||||| ||||||||||||||||| Sbjct: 26527 aagaagattatgattctcggcgctgg 26502
>gb|U40341.1|ATU40341 Arabidopsis thaliana carbamoyl phosphate synthetase large chain (CARB) mRNA, complete cds Length = 3677 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 366 aagaagatcatgattctcggcgctgg 391 |||||||| ||||||||||||||||| Sbjct: 301 aagaagattatgattctcggcgctgg 326
>gb|AC147500.6| Mus musculus BAC clone RP24-281C21 from chromosome 8, complete sequence Length = 185450 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 204 ctcctccgctccctcctccccttccc 229 ||||||| |||||||||||||||||| Sbjct: 166082 ctcctcctctccctcctccccttccc 166057
>gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, complete sequence Length = 197719 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 204 ctcctccgctccctcctccccttcc 228 ||||||| ||||||||||||||||| Sbjct: 56672 ctcctcctctccctcctccccttcc 56648
>gb|AC161376.2| Mus musculus BAC clone RP23-264M10 from chromosome 16, complete sequence Length = 199086 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 204 ctcctccgctccctcctccccttcc 228 ||||||| ||||||||||||||||| Sbjct: 127542 ctcctcctctccctcctccccttcc 127566
>ref|XM_481089.1| Oryza sativa (japonica cultivar-group), mRNA Length = 567 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tccaccctccacttcgccgcc 79 ||||||||||||||||||||| Sbjct: 124 tccaccctccacttcgccgcc 104
>ref|XM_468532.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1911 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 gctcctccgctccctcctccc 223 ||||||||||||||||||||| Sbjct: 155 gctcctccgctccctcctccc 175
>ref|XM_527457.1| PREDICTED: Pan troglodytes similar to hypothetical protein MGC2817 (LOC472078), mRNA Length = 1284 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 242 cggctcctcccgccgcggcctctccgccc 270 ||||||| ||||| ||||||||||||||| Sbjct: 140 cggctccccccgcagcggcctctccgccc 112
>gb|AC114653.11| Mus musculus chromosome 5, clone RP24-158G19, complete sequence Length = 164313 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 204 ctcctccgctccctcctccccttcc 228 ||||||| ||||||||||||||||| Sbjct: 111910 ctcctcctctccctcctccccttcc 111934
>gb|AC099524.5| Homo sapiens chromosome 16 clone RP11-960L18, complete sequence Length = 184518 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 205 tcctccgctccctcctccccttccc 229 |||||| |||||||||||||||||| Sbjct: 147037 tcctcccctccctcctccccttccc 147013
>gb|AC127341.3| Mus musculus BAC clone RP23-189L19 from chromosome 17, complete sequence Length = 213609 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 204 ctcctccgctccctcctccccttcc 228 ||||||| ||||||||||||||||| Sbjct: 85508 ctcctcccctccctcctccccttcc 85532
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 402 atcggccaggcgtgcgagttcgactactccggcacacaggc 442 ||||||||||| || || |||||||| |||||||| ||||| Sbjct: 1629763 atcggccaggcttgtgaattcgactattccggcacccaggc 1629723
>gb|AE008696.1| Salmonella typhimurium LT2, section 4 of 220 of the complete genome Length = 22039 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 402 atcggccaggcgtgcgagttcgactactccggc 434 ||||| |||||||| ||||| |||||||||||| Sbjct: 13654 atcggtcaggcgtgtgagtttgactactccggc 13686
>emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019J05, complete sequence Length = 185211 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 204 ctcctccgctccctcctccccttcc 228 ||||||| ||||||||||||||||| Sbjct: 51338 ctcctcctctccctcctccccttcc 51314
>emb|AL627265.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 1/20 Length = 251050 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 402 atcggccaggcgtgcgagttcgactactccggc 434 ||||| |||||||| ||||| |||||||||||| Sbjct: 76917 atcggtcaggcgtgtgagtttgactactccggc 76949
>gb|AC015813.12| Homo sapiens, clone RP11-159D12, complete sequence Length = 181494 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 gctccctcctccccttcccgc 231 ||||||||||||||||||||| Sbjct: 115044 gctccctcctccccttcccgc 115064
>gb|AC020689.8| Homo sapiens chromosome , clone RP11-440M23, complete sequence Length = 214702 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 204 ctcctccgctccctcctccccttcc 228 ||||||| ||||||||||||||||| Sbjct: 119325 ctcctcccctccctcctccccttcc 119301
>gb|AC140419.8| Mus musculus BAC clone RP24-435P9 from chromosome 3, complete sequence Length = 157093 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 204 ctcctccgctccctcctccccttcc 228 ||||||| ||||||||||||||||| Sbjct: 16232 ctcctcctctccctcctccccttcc 16208
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 tccaccctccacttcgccgcc 79 ||||||||||||||||||||| Sbjct: 9767538 tccaccctccacttcgccgcc 9767558
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 204 ctcctccgctccctcctccccttcc 228 ||||||| ||||||||||||||||| Sbjct: 10664285 ctcctcctctccctcctccccttcc 10664261 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 tgctcctccgctccctcctcc 222 ||||||||||||||||||||| Sbjct: 5553507 tgctcctccgctccctcctcc 5553527
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 gctcctccgctccctcctccc 223 ||||||||||||||||||||| Sbjct: 35700275 gctcctccgctccctcctccc 35700295
>gb|AC067721.22| Homo sapiens 3 BAC RP11-111F10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172953 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 204 ctcctccgctccctcctccccttcc 228 ||||||| ||||||||||||||||| Sbjct: 50330 ctcctcctctccctcctccccttcc 50306
>gb|AC004757.2| Homo sapiens chromosome 17, clone CTB-117K16, complete sequence Length = 107156 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 gctccctcctccccttcccgc 231 ||||||||||||||||||||| Sbjct: 99002 gctccctcctccccttcccgc 98982
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 402 atcggccaggcgtgcgagttcgactactccggc 434 ||||| |||||||| ||||| |||||||||||| Sbjct: 76855 atcggtcaggcgtgtgagtttgactactccggc 76887
>dbj|AP005189.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0474B11 Length = 141702 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 204 ctcctccgctccctcctccccttcc 228 ||||||| ||||||||||||||||| Sbjct: 106949 ctcctcctctccctcctccccttcc 106925
>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0081K20 Length = 117287 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 tgctcctccgctccctcctcc 222 ||||||||||||||||||||| Sbjct: 66592 tgctcctccgctccctcctcc 66612
>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_D06 Length = 102239 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 gctcctccgctccctcctccc 223 ||||||||||||||||||||| Sbjct: 60889 gctcctccgctccctcctccc 60909
>dbj|AP005095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1063H10 Length = 170453 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 tccaccctccacttcgccgcc 79 ||||||||||||||||||||| Sbjct: 31470 tccaccctccacttcgccgcc 31490
>dbj|AK101841.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069G13, full insert sequence Length = 1910 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 gctcctccgctccctcctccc 223 ||||||||||||||||||||| Sbjct: 155 gctcctccgctccctcctccc 175
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0431A02 Length = 165038 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 tgctcctccgctccctcctcc 222 ||||||||||||||||||||| Sbjct: 15199 tgctcctccgctccctcctcc 15219
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 402 atcggccaggcgtgcgagttcgactactccggc 434 ||||| |||||||| ||||| |||||||||||| Sbjct: 76908 atcggtcaggcgtgtgagtttgactactccggc 76940
>gb|AC122205.6| Mus musculus BAC clone RP23-76C13 from chromosome 8, complete sequence Length = 249808 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 204 ctcctccgctccctcctccccttcc 228 ||||||| ||||||||||||||||| Sbjct: 33351 ctcctcctctccctcctccccttcc 33375
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 402 atcggccaggcgtgcgagttcgactactccggc 434 ||||| |||||||| ||||| |||||||||||| Sbjct: 71183 atcggtcaggcgtgtgagtttgactactccggc 71215
>gb|AC102255.10| Mus musculus chromosome 18, clone RP24-182H11, complete sequence Length = 195275 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 204 ctcctccgctccctcctccccttcc 228 ||||||| ||||||||||||||||| Sbjct: 118612 ctcctcctctccctcctccccttcc 118588
>emb|AL845318.8| Mouse DNA sequence from clone RP23-326F22 on chromosome 2, complete sequence Length = 202162 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 204 ctcctccgctccctcctccccttcc 228 ||||||| ||||||||||||||||| Sbjct: 96822 ctcctcctctccctcctccccttcc 96846
>gb|AC125371.4| Mus musculus BAC clone RP24-401O6 from 16, complete sequence Length = 194685 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 204 ctcctccgctccctcctccccttcc 228 ||||||| ||||||||||||||||| Sbjct: 31211 ctcctcctctccctcctccccttcc 31235
>gb|AC133200.3| Mus musculus BAC clone RP23-292C19 from 3, complete sequence Length = 229751 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 204 ctcctccgctccctcctccccttcc 228 ||||||| ||||||||||||||||| Sbjct: 137006 ctcctcctctccctcctccccttcc 136982
>gb|U81260.1|STU81260 Salmonella typhimurium carbamoylphosphate synthetase small subunit (carA) and carbamoylphosphate synthetase large subunit (carB) genes, complete cds Length = 7679 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 402 atcggccaggcgtgcgagttcgactactccggc 434 ||||| |||||||| ||||| |||||||||||| Sbjct: 2378 atcggtcaggcgtgtgagtttgactactccggc 2410
>emb|AL591125.20| Mouse DNA sequence from clone RP23-438D7 on chromosome 11, complete sequence Length = 160284 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 204 ctcctccgctccctcctcccc 224 ||||||||||||||||||||| Sbjct: 94790 ctcctccgctccctcctcccc 94770
>gb|AC154044.2| Drosophila melanogaster clone BACR32E02, complete sequence Length = 186002 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ctacatccccatcgccccct 58 |||||||||||||||||||| Sbjct: 117036 ctacatccccatcgccccct 117055
>gb|AC154051.2| Drosophila melanogaster clone BACR17E02, complete sequence Length = 168158 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ctacatccccatcgccccct 58 |||||||||||||||||||| Sbjct: 45616 ctacatccccatcgccccct 45635
>gb|AC119856.13| Mus musculus chromosome 5, clone RP23-256B18, complete sequence Length = 218174 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 tcctccgctccctcctccccttcc 228 |||||| ||||||||||||||||| Sbjct: 20116 tcctcctctccctcctccccttcc 20139
>gb|AE017141.1| Yersinia pestis biovar Medievalis str. 91001 section 15 of 16 of the complete genome Length = 293371 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 402 atcggccaggcgtgcgagttcgactactccgg 433 ||||||||||| || ||||| ||||||||||| Sbjct: 139268 atcggccaggcttgtgagtttgactactccgg 139237
>gb|CP000145.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete sequence Length = 114178 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 ccgccgcggcctctccgcccgctccgcc 278 |||||||||||||| ||||||| ||||| Sbjct: 80329 ccgccgcggcctcttcgcccgcgccgcc 80356
>gb|AC145322.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0096N19, complete sequence Length = 178671 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 tcctccgctccctcctccccttcc 228 |||||| ||||||||||||||||| Sbjct: 103929 tcctcctctccctcctccccttcc 103906
>gb|AC130138.9| Rattus norvegicus 2 BAC CH230-204B23 (Children's Hospital Oakland Research Institute) complete sequence Length = 189178 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 cctccgctccctcctccccttccc 229 ||||| |||||||||||||||||| Sbjct: 69807 cctcccctccctcctccccttccc 69830
>gb|BC046523.1| Mus musculus cyclic nucleotide gated channel beta 1b, mRNA (cDNA clone IMAGE:5362920), partial cds Length = 3099 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccaagggcggcaagctcgcc 359 |||||||||||||||||||| Sbjct: 555 ccaagggcggcaagctcgcc 574
>gb|BC045114.1| Mus musculus cyclic nucleotide gated channel beta 1b, mRNA (cDNA clone IMAGE:4504353), partial cds Length = 4763 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccaagggcggcaagctcgcc 359 |||||||||||||||||||| Sbjct: 2223 ccaagggcggcaagctcgcc 2242
>ref|XM_366183.1| Magnaporthe grisea 70-15 chromosome IV hypothetical protein (MG10402.4) partial mRNA Length = 1581 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agcccaccaagggcggcaag 353 |||||||||||||||||||| Sbjct: 896 agcccaccaagggcggcaag 915
>gb|AC114342.12| Mus musculus chromosome 5, clone RP24-143H14, complete sequence Length = 171509 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 tcctccgctccctcctccccttcc 228 |||||| ||||||||||||||||| Sbjct: 136301 tcctcctctccctcctccccttcc 136324
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 402 atcggccaggcgtgcgagttcgactactccgg 433 ||||||||||| || ||||| ||||||||||| Sbjct: 4105248 atcggccaggcttgtgagtttgactactccgg 4105217
>gb|AY950617.1| Lilium longiflorum pollen ankyrin-like protein mRNA, complete cds Length = 1906 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 ttccaccctccacttcgccgccgc 81 |||| ||||||||||||||||||| Sbjct: 294 ttcccccctccacttcgccgccgc 317
>gb|AY452766.1| Chlorobium vibrioforme strain 8327D truncated C-20 methyltransferase (bchU) gene, complete cds Length = 951 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 caagctcgccggcgtcaagaagat 373 |||||||| ||||||||||||||| Sbjct: 496 caagctcgacggcgtcaagaagat 519
>gb|AY452765.1| Chlorobium vibrioforme strain 8327c C-20 methyltransferase (bchU) gene, partial cds Length = 922 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 caagctcgccggcgtcaagaagat 373 |||||||| ||||||||||||||| Sbjct: 435 caagctcgacggcgtcaagaagat 458
>gb|AC132624.3| Mus musculus BAC clone RP23-77B21 from chromosome 18, complete sequence Length = 161099 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 cctccgctccctcctccccttccc 229 ||||| |||||||||||||||||| Sbjct: 43741 cctcctctccctcctccccttccc 43718
>gb|BC098603.1| Danio rerio zgc:111944, mRNA (cDNA clone MGC:111944 IMAGE:3816445), complete cds Length = 4706 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 aggcttgcaggcgctcgtcg 458 |||||||||||||||||||| Sbjct: 736 aggcttgcaggcgctcgtcg 755
>ref|XM_505405.1| Yarrowia lipolytica CLIB122, YALI0F14267g predicted mRNA Length = 1128 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gctcctcccgccgcggcctc 263 |||||||||||||||||||| Sbjct: 40 gctcctcccgccgcggcctc 59
>emb|AL023575.1|HS931E15 Human DNA sequence from clone RP5-931E15 on chromosome Xq25 Contains the 5' end of the THOC2 gene for THO complex 2, a novel gene, a chromosome 2 open reading frame 4 (C2orf4) pseudogene, a coiled-coil-helix-coiled-coil-helix domain containing 2 (CHCHD2) pseudogene and a CpG island, complete sequence Length = 81874 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 cgctccctcctccccttccc 229 |||||||||||||||||||| Sbjct: 21272 cgctccctcctccccttccc 21253
>ref|NM_001030161.1| Danio rerio zgc:111944 (zgc:111944), mRNA Length = 4706 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 aggcttgcaggcgctcgtcg 458 |||||||||||||||||||| Sbjct: 736 aggcttgcaggcgctcgtcg 755
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 402 atcggccaggcgtgcgagttcgactactccgg 433 ||||||||||| || ||||| ||||||||||| Sbjct: 740551 atcggccaggcttgtgagtttgactactccgg 740582
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 369 aagatcatgattctcggcgctgggccca 396 ||||||||||||||||||| ||||||| Sbjct: 1884254 aagatcatgattctcggcggcgggccca 1884227
>emb|AL606991.3|OSJN00113 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032B23, complete sequence Length = 120640 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 gggcggcaagctcgccggcg 363 |||||||||||||||||||| Sbjct: 107524 gggcggcaagctcgccggcg 107505
>emb|AJ715415.1| Bactrocera oleae mRNA for sex-lethal protein Length = 3278 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 acatgcccctcctacgcccaccgc 194 ||||||||| |||||||||||||| Sbjct: 397 acatgccccacctacgcccaccgc 374
>emb|AJ414143.1| Yersinia pestis strain CO92 complete genome; segment 3/20 Length = 201050 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 402 atcggccaggcgtgcgagttcgactactccgg 433 ||||||||||| || ||||| ||||||||||| Sbjct: 11355 atcggccaggcttgtgagtttgactactccgg 11386
>emb|AJ000515.1|RNCNG43 Rattus norvegicus mRNA for cyclic nucleotide-gated cation channel, beta subunit Length = 3236 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccaagggcggcaagctcgcc 359 |||||||||||||||||||| Sbjct: 2651 ccaagggcggcaagctcgcc 2670
>emb|AJ000496.1|RNCNG41 Rattus norvegicus mRNA for cyclic nucleotide-gated cation channel beta subunit Length = 4238 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccaagggcggcaagctcgcc 359 |||||||||||||||||||| Sbjct: 3717 ccaagggcggcaagctcgcc 3736
>emb|BX511204.3|RN187K23 Rattus norvegicus chromosome 1 BAC RP32-187K23, complete sequence Length = 157991 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 tcctccgctccctcctccccttcc 228 |||||| ||||||||||||||||| Sbjct: 112520 tcctcctctccctcctccccttcc 112543
>emb|BX890560.9| Zebrafish DNA sequence from clone CH211-204O10 in linkage group 2, complete sequence Length = 23326 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 aggcttgcaggcgctcgtcg 458 |||||||||||||||||||| Sbjct: 16973 aggcttgcaggcgctcgtcg 16954
>gb|AC009773.27| Homo sapiens 12 BAC RP11-82C23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 130027 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ctcctccgctccctcctccc 223 |||||||||||||||||||| Sbjct: 10426 ctcctccgctccctcctccc 10445
>gb|AC151608.2| Emiliania huxleyi clone JGIACCU-13E1, complete sequence Length = 30907 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 194 cgccaccgtgctcctccgctccctcctc 221 |||| |||||||||||||| |||||||| Sbjct: 13800 cgccgccgtgctcctccgcgccctcctc 13827
>gb|AC013564.7| Homo sapiens chromosome 15, clone RP11-321F6, complete sequence Length = 210133 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 tcctcccgccgcggcctctc 265 |||||||||||||||||||| Sbjct: 151555 tcctcccgccgcggcctctc 151536
>dbj|AB248240.1| Chlorobaculum parvum bchU gene for C-20 methyltransferase, complete cds Length = 1017 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 caagctcgccggcgtcaagaagat 373 |||||||| ||||||||||||||| Sbjct: 495 caagctcgacggcgtcaagaagat 518
>gb|AC161015.4| Pan troglodytes BAC clone CH251-489I22 from chromosome unknown, complete sequence Length = 186290 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 cgctccctcctccccttccc 229 |||||||||||||||||||| Sbjct: 105499 cgctccctcctccccttccc 105480
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 408 caggcgtgcgagttcgactactccggcacacaggcttgca 447 |||||||||||||| || ||||| ||||| || ||||||| Sbjct: 919203 caggcgtgcgagtttgattactcgggcacccaagcttgca 919164
>gb|AC097446.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0034B05, complete sequence Length = 175061 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 gggcggcaagctcgccggcg 363 |||||||||||||||||||| Sbjct: 79829 gggcggcaagctcgccggcg 79848
>gb|AC105343.4| Homo sapiens BAC clone RP11-423J7 from 4, complete sequence Length = 155217 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 ctcctccgctccctcctccccttc 227 ||||||||| |||||||||||||| Sbjct: 132044 ctcctccgccccctcctccccttc 132067
>emb|BX935675.2| Gallus gallus finished cDNA, clone ChEST324k16 Length = 1472 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 cctccgctccctcctccccttccc 229 ||||| |||||||||||||||||| Sbjct: 1415 cctcccctccctcctccccttccc 1392
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 194 cgccaccgtgctcctccgctccctcctcccct 225 |||| |||| |||||||||| ||||||||||| Sbjct: 23579113 cgccgccgtcctcctccgcttcctcctcccct 23579144 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 gggcggcaagctcgccggcg 363 |||||||||||||||||||| Sbjct: 14471416 gggcggcaagctcgccggcg 14471397
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 tcctccgctccctcctccccttcc 228 |||||| ||||||||||||||||| Sbjct: 4727745 tcctcctctccctcctccccttcc 4727768
>ref|NM_031809.1| Rattus norvegicus cyclic nucleotide gated channel beta 1 (Cngb1), mRNA Length = 4238 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccaagggcggcaagctcgcc 359 |||||||||||||||||||| Sbjct: 3717 ccaagggcggcaagctcgcc 3736
>ref|XM_579536.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_031809 (LOC497725), mRNA Length = 4231 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccaagggcggcaagctcgcc 359 |||||||||||||||||||| Sbjct: 3714 ccaagggcggcaagctcgcc 3733
>gb|AC119939.14| Mus musculus chromosome 5, clone RP24-267A23, complete sequence Length = 180700 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 cctccgctccctcctccccttccc 229 ||||| |||||||||||||||||| Sbjct: 155722 cctcctctccctcctccccttccc 155745
>gb|AF068572.1|AF068572 Rattus norvegicus cyclic nucleotide-gated channel beta subunit 1b mRNA, complete cds Length = 3328 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccaagggcggcaagctcgcc 359 |||||||||||||||||||| Sbjct: 2749 ccaagggcggcaagctcgcc 2768
>dbj|AK102914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113M06, full insert sequence Length = 2676 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 194 cgccaccgtgctcctccgctccctcctcccct 225 |||| |||| |||||||||| ||||||||||| Sbjct: 97 cgccgccgtcctcctccgcttcctcctcccct 128
>emb|Z82976.1|HS506G2B Human DNA sequence from clone RP3-506G2 on chromosome X, complete sequence Length = 37027 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 cgctccctcctccccttccc 229 |||||||||||||||||||| Sbjct: 20868 cgctccctcctccccttccc 20849
>emb|Z59653.1|HS168B6R H.sapiens CpG island DNA genomic Mse1 fragment, clone 168b6, reverse read cpg168b6.rt1a Length = 204 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 cgctccctcctccccttccc 229 |||||||||||||||||||| Sbjct: 169 cgctccctcctccccttccc 188
>gb|AE003428.4| Drosophila melanogaster chromosome X, section 12 of 74 of the complete sequence Length = 203546 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ctacatccccatcgccccct 58 |||||||||||||||||||| Sbjct: 62893 ctacatccccatcgccccct 62874
>emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on chromosome 4, complete sequence Length = 227816 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 tcctccgctccctcctccccttcc 228 |||||| ||||||||||||||||| Sbjct: 181984 tcctcccctccctcctccccttcc 182007
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 tcctccgctccctcctccccttcc 228 |||||| ||||||||||||||||| Sbjct: 4746529 tcctcctctccctcctccccttcc 4746552
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 194 cgccaccgtgctcctccgctccctcctcccct 225 |||| |||| |||||||||| ||||||||||| Sbjct: 23507304 cgccgccgtcctcctccgcttcctcctcccct 23507335 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 gggcggcaagctcgccggcg 363 |||||||||||||||||||| Sbjct: 14425700 gggcggcaagctcgccggcg 14425681
>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157690 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 194 cgccaccgtgctcctccgctccctcctcccct 225 |||| |||| |||||||||| ||||||||||| Sbjct: 127297 cgccgccgtcctcctccgcttcctcctcccct 127266
>emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC OJ1112_B07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 118101 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 gggcggcaagctcgccggcg 363 |||||||||||||||||||| Sbjct: 45876 gggcggcaagctcgccggcg 45895
>gb|AC145978.3| Gallus gallus BAC clone CH261-10K7 from chromosome unknown, complete sequence Length = 216402 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 250 cccgccgcggcctctccgcccgct 273 |||||||| ||||||||||||||| Sbjct: 37944 cccgccgctgcctctccgcccgct 37967
>gb|AC145947.3| Gallus gallus BAC clone CH261-24O5 from chromosome unknown, complete sequence Length = 233033 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 cccgccgcggcctctccgcccgct 273 |||||||| ||||||||||||||| Sbjct: 148758 cccgccgctgcctctccgcccgct 148735
>gb|AC102518.11| Mus musculus chromosome 8, clone RP24-502J8, complete sequence Length = 199824 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccaagggcggcaagctcgcc 359 |||||||||||||||||||| Sbjct: 81486 ccaagggcggcaagctcgcc 81505
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gctcctcccgccgcggcctc 263 |||||||||||||||||||| Sbjct: 1917873 gctcctcccgccgcggcctc 1917854
>emb|AL663037.13| Mouse DNA sequence from clone RP23-103K12 on chromosome 4, complete sequence Length = 246021 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 ctcctccgctccctcctccccttc 227 ||||||| |||||||||||||||| Sbjct: 212078 ctcctcctctccctcctccccttc 212055
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 408 caggcgtgcgagttcgactactccggcacacaggcttgca 447 |||||||||||||| || ||||| ||||| || ||||||| Sbjct: 701667 caggcgtgcgagtttgattactcgggcacccaagcttgca 701706 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,136,718 Number of Sequences: 3902068 Number of extensions: 3136718 Number of successful extensions: 87609 Number of sequences better than 10.0: 212 Number of HSP's better than 10.0 without gapping: 215 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81331 Number of HSP's gapped (non-prelim): 6276 length of query: 464 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 442 effective length of database: 17,147,199,772 effective search space: 7579062299224 effective search space used: 7579062299224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
