ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl46d06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 242 8e-61
2dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 242 8e-61
3gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 geno... 242 8e-61
4dbj|AK120055.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 8e-61
5dbj|AK071327.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 8e-61
6ref|XM_469554.1| Oryza sativa (japonica cultivar-group), mRNA 236 5e-59
7gb|DQ237917.1| Oryza sativa (indica cultivar-group) TVLP1 (TVLP1... 234 2e-58
8ref|NM_191307.1| Oryza sativa (japonica cultivar-group), predic... 84 5e-13
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
10dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
11dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
12dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
13dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
14emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4,... 68 3e-08
15emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 44 0.39
16emb|AL591492.11| Zebrafish DNA sequence from clone BUSM1-261O22 ... 44 0.39
17ref|XM_521899.1| PREDICTED: Pan troglodytes similar to carbohydr... 42 1.6
18ref|NM_003654.2| Homo sapiens carbohydrate (keratan sulfate Gal-... 42 1.6
19gb|BC028235.1| Homo sapiens carbohydrate (keratan sulfate Gal-6)... 42 1.6
20gb|AY339617.1| Homo sapiens carbohydrate (keratan sulfate Gal-6)... 42 1.6
21gb|AC087442.13| Homo sapiens chromosome 11, clone RP11-495O11, c... 42 1.6
22gb|BC022567.1| Homo sapiens carbohydrate (keratan sulfate Gal-6)... 42 1.6
23gb|AF090137.1|AF090137 Homo sapiens carbohydrate sulfotransferas... 42 1.6
24gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic se... 42 1.6
25gb|U65637.1|HSU65637 Homo sapiens chondroitin-6-sulfotransferase... 42 1.6
26dbj|AB003791.1| Homo sapiens mRNA for keratan sulfate Gal-6-sulf... 42 1.6
27gb|AC166710.7| Mus musculus chromosome 1, clone RP24-252K15, com... 40 6.1
28ref|XM_466121.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.1
29gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 6.1
30ref|XM_417734.1| PREDICTED: Gallus gallus similar to LOC394859 p... 40 6.1
31gb|AY461452.1| Rattus norvegicus Shank1 mRNA, 3' UTR 40 6.1
32gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, com... 40 6.1
33ref|XM_540763.2| PREDICTED: Canis familiaris similar to carbohyd... 40 6.1
34ref|XM_845613.1| PREDICTED: Canis familiaris similar to carbohyd... 40 6.1
35emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete ch... 40 6.1
36emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 40 6.1
37emb|AL593857.10| Mouse DNA sequence from clone RP23-439H2 on chr... 40 6.1
38dbj|AK145499.1| Mus musculus blastocyst blastocyst cDNA, RIKEN f... 40 6.1
39dbj|AK159084.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 40 6.1
40dbj|AK145682.1| Mus musculus blastocyst blastocyst cDNA, RIKEN f... 40 6.1
41dbj|AK162264.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 40 6.1
42dbj|AK159956.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 40 6.1
43dbj|AK168657.1| Mus musculus 17 days embryo heart cDNA, RIKEN fu... 40 6.1
44dbj|AK159614.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 40 6.1
45dbj|AK167200.1| Mus musculus blastocyst blastocyst cDNA, RIKEN f... 40 6.1
46dbj|AK165844.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-... 40 6.1
47dbj|AK089058.1| Mus musculus 2 days neonate thymus thymic cells ... 40 6.1
48dbj|AK037517.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 6.1
49dbj|AK029944.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.1
50dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
51dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.1
52gb|AF275943.1|AF275943 Streptomyces avermitilis avermectin polyk... 40 6.1
53dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 6.1
54dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
55emb|AL929537.17| Mouse DNA sequence from clone RP23-147E9 on chr... 40 6.1
56ref|XM_564742.1| Anopheles gambiae str. PEST ENSANGP00000026106 ... 40 6.1
57ref|XM_308365.2| Anopheles gambiae str. PEST ENSANGP00000009420 ... 40 6.1
58emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 6.1
59gb|BC018353.1| Mus musculus heterogeneous nuclear ribonucleoprot... 40 6.1
60emb|CT571256.7| Mouse DNA sequence from clone RP24-135B13 on chr... 40 6.1
61dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynt... 40 6.1
62dbj|AB032367.1| Streptomyces avermitilis polyketide synthase gen... 40 6.1 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  242 bits (122), Expect = 8e-61
 Identities = 305/364 (83%), Gaps = 4/364 (1%)
 Strand = Plus / Minus

                                                                            
Query: 93       gccatggtgcatagtgcgtatgacgccgtcgagctggtctccggcgtgcccggccgcatc 152
                ||||||||||| || ||||| ||||||||||||||||||||||||||||| |||  ||||
Sbjct: 28680184 gccatggtgcacagcgcgtacgacgccgtcgagctggtctccggcgtgccgggcgacatc 28680125

                                                                            
Query: 153      gaggccgtcgcctcccacgccgggaagctcctcgtcgcggcctccgactgctcgctccgc 212
                | |||||| ||| || ||||||||| ||||||||||||||     ||| |||| ||||||
Sbjct: 28680124 gtggccgtggccgcctacgccgggaggctcctcgtcgcggggaaggacggctccctccgc 28680065

                                                                            
Query: 213      atctactccgcgccgccccccgccgacggcgagatccggagggacgggccctacgcgctc 272
                |||||| || | |||  || ||||| ||||| ||||| | |||||||||| |||||||| 
Sbjct: 28680064 atctacgcctccccgggccacgccggcggcgggatcccgcgggacgggccgtacgcgctg 28680005

                                                                            
Query: 273      gagcgccaggagcagcgcctctggcgccgcg---cgccctccgccatggaggccagcgcc 329
                ||||| ||| |||     || ||||||||||   |||||   || ||||||| |||||||
Sbjct: 28680004 gagcggcagcagccctcgctgtggcgccgcgggacgcccctggcgatggaggtcagcgcc 28679945

                                                                            
Query: 330      agccgcgacctcctgctctcgctctccgagtgggtcgccctccaccgcctcccggggctc 389
                 ||||||| ||||||||||||||| ||||||| |||  ||||||||||||||| ||||||
Sbjct: 28679944 ggccgcgagctcctgctctcgctcgccgagtgcgtcaacctccaccgcctccccgggctc 28679885

                                                                            
Query: 390      gagaccgtcgccgtcgtc-tccagaccaagggcgccaacgtcttcgcctgggacgaccgc 448
                ||||||||||||||| ||    ||||||||||||||||| ||||||||||||||||||||
Sbjct: 28679884 gagaccgtcgccgtcatcgggaagaccaagggcgccaacctcttcgcctgggacgaccgc 28679825

                    
Query: 449      cggg 452
                ||||
Sbjct: 28679824 cggg 28679821



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 33       gacgaccgccggggccgcctcgcg 56
                |||||||||||||||| |||||||
Sbjct: 28679833 gacgaccgccggggcctcctcgcg 28679810
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  242 bits (122), Expect = 8e-61
 Identities = 305/364 (83%), Gaps = 4/364 (1%)
 Strand = Plus / Minus

                                                                            
Query: 93       gccatggtgcatagtgcgtatgacgccgtcgagctggtctccggcgtgcccggccgcatc 152
                ||||||||||| || ||||| ||||||||||||||||||||||||||||| |||  ||||
Sbjct: 28771508 gccatggtgcacagcgcgtacgacgccgtcgagctggtctccggcgtgccgggcgacatc 28771449

                                                                            
Query: 153      gaggccgtcgcctcccacgccgggaagctcctcgtcgcggcctccgactgctcgctccgc 212
                | |||||| ||| || ||||||||| ||||||||||||||     ||| |||| ||||||
Sbjct: 28771448 gtggccgtggccgcctacgccgggaggctcctcgtcgcggggaaggacggctccctccgc 28771389

                                                                            
Query: 213      atctactccgcgccgccccccgccgacggcgagatccggagggacgggccctacgcgctc 272
                |||||| || | |||  || ||||| ||||| ||||| | |||||||||| |||||||| 
Sbjct: 28771388 atctacgcctccccgggccacgccggcggcgggatcccgcgggacgggccgtacgcgctg 28771329

                                                                            
Query: 273      gagcgccaggagcagcgcctctggcgccgcg---cgccctccgccatggaggccagcgcc 329
                ||||| ||| |||     || ||||||||||   |||||   || ||||||| |||||||
Sbjct: 28771328 gagcggcagcagccctcgctgtggcgccgcgggacgcccctggcgatggaggtcagcgcc 28771269

                                                                            
Query: 330      agccgcgacctcctgctctcgctctccgagtgggtcgccctccaccgcctcccggggctc 389
                 ||||||| ||||||||||||||| ||||||| |||  ||||||||||||||| ||||||
Sbjct: 28771268 ggccgcgagctcctgctctcgctcgccgagtgcgtcaacctccaccgcctccccgggctc 28771209

                                                                            
Query: 390      gagaccgtcgccgtcgtc-tccagaccaagggcgccaacgtcttcgcctgggacgaccgc 448
                ||||||||||||||| ||    ||||||||||||||||| ||||||||||||||||||||
Sbjct: 28771208 gagaccgtcgccgtcatcgggaagaccaagggcgccaacctcttcgcctgggacgaccgc 28771149

                    
Query: 449      cggg 452
                ||||
Sbjct: 28771148 cggg 28771145



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 33       gacgaccgccggggccgcctcgcg 56
                |||||||||||||||| |||||||
Sbjct: 28771157 gacgaccgccggggcctcctcgcg 28771134
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>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete
             sequence
          Length = 158839

 Score =  242 bits (122), Expect = 8e-61
 Identities = 305/364 (83%), Gaps = 4/364 (1%)
 Strand = Plus / Plus

                                                                         
Query: 93    gccatggtgcatagtgcgtatgacgccgtcgagctggtctccggcgtgcccggccgcatc 152
             ||||||||||| || ||||| ||||||||||||||||||||||||||||| |||  ||||
Sbjct: 18712 gccatggtgcacagcgcgtacgacgccgtcgagctggtctccggcgtgccgggcgacatc 18771

                                                                         
Query: 153   gaggccgtcgcctcccacgccgggaagctcctcgtcgcggcctccgactgctcgctccgc 212
             | |||||| ||| || ||||||||| ||||||||||||||     ||| |||| ||||||
Sbjct: 18772 gtggccgtggccgcctacgccgggaggctcctcgtcgcggggaaggacggctccctccgc 18831

                                                                         
Query: 213   atctactccgcgccgccccccgccgacggcgagatccggagggacgggccctacgcgctc 272
             |||||| || | |||  || ||||| ||||| ||||| | |||||||||| |||||||| 
Sbjct: 18832 atctacgcctccccgggccacgccggcggcgggatcccgcgggacgggccgtacgcgctg 18891

                                                                         
Query: 273   gagcgccaggagcagcgcctctggcgccgcg---cgccctccgccatggaggccagcgcc 329
             ||||| ||| |||     || ||||||||||   |||||   || ||||||| |||||||
Sbjct: 18892 gagcggcagcagccctcgctgtggcgccgcgggacgcccctggcgatggaggtcagcgcc 18951

                                                                         
Query: 330   agccgcgacctcctgctctcgctctccgagtgggtcgccctccaccgcctcccggggctc 389
              ||||||| ||||||||||||||| ||||||| |||  ||||||||||||||| ||||||
Sbjct: 18952 ggccgcgagctcctgctctcgctcgccgagtgcgtcaacctccaccgcctccccgggctc 19011

                                                                         
Query: 390   gagaccgtcgccgtcgtc-tccagaccaagggcgccaacgtcttcgcctgggacgaccgc 448
             ||||||||||||||| ||    ||||||||||||||||| ||||||||||||||||||||
Sbjct: 19012 gagaccgtcgccgtcatcgggaagaccaagggcgccaacctcttcgcctgggacgaccgc 19071

                 
Query: 449   cggg 452
             ||||
Sbjct: 19072 cggg 19075



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 33    gacgaccgccggggccgcctcgcg 56
             |||||||||||||||| |||||||
Sbjct: 19063 gacgaccgccggggcctcctcgcg 19086
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>dbj|AK120055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O06, full
           insert sequence
          Length = 3591

 Score =  242 bits (122), Expect = 8e-61
 Identities = 305/364 (83%), Gaps = 4/364 (1%)
 Strand = Plus / Plus

                                                                       
Query: 93  gccatggtgcatagtgcgtatgacgccgtcgagctggtctccggcgtgcccggccgcatc 152
           ||||||||||| || ||||| ||||||||||||||||||||||||||||| |||  ||||
Sbjct: 154 gccatggtgcacagcgcgtacgacgccgtcgagctggtctccggcgtgccgggcgacatc 213

                                                                       
Query: 153 gaggccgtcgcctcccacgccgggaagctcctcgtcgcggcctccgactgctcgctccgc 212
           | |||||| ||| || ||||||||| ||||||||||||||     ||| |||| ||||||
Sbjct: 214 gtggccgtggccgcctacgccgggaggctcctcgtcgcggggaaggacggctccctccgc 273

                                                                       
Query: 213 atctactccgcgccgccccccgccgacggcgagatccggagggacgggccctacgcgctc 272
           |||||| || | |||  || ||||| ||||| ||||| | |||||||||| |||||||| 
Sbjct: 274 atctacgcctccccgggccacgccggcggcgggatcccgcgggacgggccgtacgcgctg 333

                                                                       
Query: 273 gagcgccaggagcagcgcctctggcgccgcg---cgccctccgccatggaggccagcgcc 329
           ||||| ||| |||     || ||||||||||   |||||   || ||||||| |||||||
Sbjct: 334 gagcggcagcagccctcgctgtggcgccgcgggacgcccctggcgatggaggtcagcgcc 393

                                                                       
Query: 330 agccgcgacctcctgctctcgctctccgagtgggtcgccctccaccgcctcccggggctc 389
            ||||||| ||||||||||||||| ||||||| |||  ||||||||||||||| ||||||
Sbjct: 394 ggccgcgagctcctgctctcgctcgccgagtgcgtcaacctccaccgcctccccgggctc 453

                                                                       
Query: 390 gagaccgtcgccgtcgtc-tccagaccaagggcgccaacgtcttcgcctgggacgaccgc 448
           ||||||||||||||| ||    ||||||||||||||||| ||||||||||||||||||||
Sbjct: 454 gagaccgtcgccgtcatcgggaagaccaagggcgccaacctcttcgcctgggacgaccgc 513

               
Query: 449 cggg 452
           ||||
Sbjct: 514 cggg 517



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 33  gacgaccgccggggccgcctcgcg 56
           |||||||||||||||| |||||||
Sbjct: 505 gacgaccgccggggcctcctcgcg 528
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>dbj|AK071327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089C05, full
           insert sequence
          Length = 3429

 Score =  242 bits (122), Expect = 8e-61
 Identities = 305/364 (83%), Gaps = 4/364 (1%)
 Strand = Plus / Plus

                                                                       
Query: 93  gccatggtgcatagtgcgtatgacgccgtcgagctggtctccggcgtgcccggccgcatc 152
           ||||||||||| || ||||| ||||||||||||||||||||||||||||| |||  ||||
Sbjct: 163 gccatggtgcacagcgcgtacgacgccgtcgagctggtctccggcgtgccgggcgacatc 222

                                                                       
Query: 153 gaggccgtcgcctcccacgccgggaagctcctcgtcgcggcctccgactgctcgctccgc 212
           | |||||| ||| || ||||||||| ||||||||||||||     ||| |||| ||||||
Sbjct: 223 gtggccgtggccgcctacgccgggaggctcctcgtcgcggggaaggacggctccctccgc 282

                                                                       
Query: 213 atctactccgcgccgccccccgccgacggcgagatccggagggacgggccctacgcgctc 272
           |||||| || | |||  || ||||| ||||| ||||| | |||||||||| |||||||| 
Sbjct: 283 atctacgcctccccgggccacgccggcggcgggatcccgcgggacgggccgtacgcgctg 342

                                                                       
Query: 273 gagcgccaggagcagcgcctctggcgccgcg---cgccctccgccatggaggccagcgcc 329
           ||||| ||| |||     || ||||||||||   |||||   || ||||||| |||||||
Sbjct: 343 gagcggcagcagccctcgctgtggcgccgcgggacgcccctggcgatggaggtcagcgcc 402

                                                                       
Query: 330 agccgcgacctcctgctctcgctctccgagtgggtcgccctccaccgcctcccggggctc 389
            ||||||| ||||||||||||||| ||||||| |||  ||||||||||||||| ||||||
Sbjct: 403 ggccgcgagctcctgctctcgctcgccgagtgcgtcaacctccaccgcctccccgggctc 462

                                                                       
Query: 390 gagaccgtcgccgtcgtc-tccagaccaagggcgccaacgtcttcgcctgggacgaccgc 448
           ||||||||||||||| ||    ||||||||||||||||| ||||||||||||||||||||
Sbjct: 463 gagaccgtcgccgtcatcgggaagaccaagggcgccaacctcttcgcctgggacgaccgc 522

               
Query: 449 cggg 452
           ||||
Sbjct: 523 cggg 526



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 33  gacgaccgccggggccgcctcgcg 56
           |||||||||||||||| |||||||
Sbjct: 514 gacgaccgccggggcctcctcgcg 537
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>ref|XM_469554.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3117

 Score =  236 bits (119), Expect = 5e-59
 Identities = 302/361 (83%), Gaps = 4/361 (1%)
 Strand = Plus / Plus

                                                                       
Query: 96  atggtgcatagtgcgtatgacgccgtcgagctggtctccggcgtgcccggccgcatcgag 155
           |||||||| || ||||| ||||||||||||||||||||||||||||| |||  ||||| |
Sbjct: 1   atggtgcacagcgcgtacgacgccgtcgagctggtctccggcgtgccgggcgacatcgtg 60

                                                                       
Query: 156 gccgtcgcctcccacgccgggaagctcctcgtcgcggcctccgactgctcgctccgcatc 215
           ||||| ||| || ||||||||| ||||||||||||||     ||| |||| |||||||||
Sbjct: 61  gccgtggccgcctacgccgggaggctcctcgtcgcggggaaggacggctccctccgcatc 120

                                                                       
Query: 216 tactccgcgccgccccccgccgacggcgagatccggagggacgggccctacgcgctcgag 275
           ||| || | |||  || ||||| ||||| ||||| | |||||||||| |||||||| |||
Sbjct: 121 tacgcctccccgggccacgccggcggcgggatcccgcgggacgggccgtacgcgctggag 180

                                                                       
Query: 276 cgccaggagcagcgcctctggcgccgcg---cgccctccgccatggaggccagcgccagc 332
           || ||| |||     || ||||||||||   |||||   || ||||||| ||||||| ||
Sbjct: 181 cggcagcagccctcgctgtggcgccgcgggacgcccctggcgatggaggtcagcgccggc 240

                                                                       
Query: 333 cgcgacctcctgctctcgctctccgagtgggtcgccctccaccgcctcccggggctcgag 392
           ||||| ||||||||||||||| ||||||| |||  ||||||||||||||| |||||||||
Sbjct: 241 cgcgagctcctgctctcgctcgccgagtgcgtcaacctccaccgcctccccgggctcgag 300

                                                                       
Query: 393 accgtcgccgtcgtc-tccagaccaagggcgccaacgtcttcgcctgggacgaccgccgg 451
           |||||||||||| ||    ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 301 accgtcgccgtcatcgggaagaccaagggcgccaacctcttcgcctgggacgaccgccgg 360

            
Query: 452 g 452
           |
Sbjct: 361 g 361



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 33  gacgaccgccggggccgcctcgcg 56
           |||||||||||||||| |||||||
Sbjct: 349 gacgaccgccggggcctcctcgcg 372
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>gb|DQ237917.1| Oryza sativa (indica cultivar-group) TVLP1 (TVLP1) mRNA, complete
           cds
          Length = 3475

 Score =  234 bits (118), Expect = 2e-58
 Identities = 304/364 (83%), Gaps = 4/364 (1%)
 Strand = Plus / Plus

                                                                       
Query: 93  gccatggtgcatagtgcgtatgacgccgtcgagctggtctccggcgtgcccggccgcatc 152
           ||||||||||| || ||||| |||||||||||| |||||||||||||||| |||  ||||
Sbjct: 36  gccatggtgcacagcgcgtacgacgccgtcgagttggtctccggcgtgccgggcgacatc 95

                                                                       
Query: 153 gaggccgtcgcctcccacgccgggaagctcctcgtcgcggcctccgactgctcgctccgc 212
           | |||||| ||| || ||||||||| ||||||||||||||     ||| |||| ||||||
Sbjct: 96  gtggccgtggccgcctacgccgggaggctcctcgtcgcggggaaggacggctccctccgc 155

                                                                       
Query: 213 atctactccgcgccgccccccgccgacggcgagatccggagggacgggccctacgcgctc 272
           |||||| || | |||  || ||||| ||||| ||||| | |||||||||| |||||||| 
Sbjct: 156 atctacgcctccccgggccacgccggcggcgggatcccgcgggacgggccgtacgcgctg 215

                                                                       
Query: 273 gagcgccaggagcagcgcctctggcgccgcg---cgccctccgccatggaggccagcgcc 329
           ||||| ||| |||     || ||||||||||   |||||   || ||||||| |||||||
Sbjct: 216 gagcggcagcagccctcgctgtggcgccgcgggacgcccctggcgatggaggtcagcgcc 275

                                                                       
Query: 330 agccgcgacctcctgctctcgctctccgagtgggtcgccctccaccgcctcccggggctc 389
            ||||||| ||||||||||||||| ||||||| |||  ||||||||||||||| ||||||
Sbjct: 276 ggccgcgagctcctgctctcgctcgccgagtgcgtcaacctccaccgcctccccgggctc 335

                                                                       
Query: 390 gagaccgtcgccgtcgtc-tccagaccaagggcgccaacgtcttcgcctgggacgaccgc 448
           ||||||||||||||| ||    ||||||||||||||||| ||||||||||||||||||||
Sbjct: 336 gagaccgtcgccgtcatcgggaagaccaagggcgccaacctcttcgcctgggacgaccgc 395

               
Query: 449 cggg 452
           ||||
Sbjct: 396 cggg 399



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 33  gacgaccgccggggccgcctcgcg 56
           |||||||||||||||| |||||||
Sbjct: 387 gacgaccgccggggcctcctcgcg 410
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>ref|NM_191307.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 822

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 76/86 (88%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                       
Query: 368 cctccaccgcctcccggggctcgagaccgtcgccgtcgtctcca-gaccaagggcgccaa 426
           |||||| |||||||| ||||||||||||||||||||| ||   | |||||| ||||||||
Sbjct: 704 cctccatcgcctccccgggctcgagaccgtcgccgtcatcgggaagaccaatggcgccaa 763

                                     
Query: 427 cgtcttcgcctgggacgaccgccggg 452
           | ||||||||||||| ||||||||||
Sbjct: 764 cctcttcgcctgggatgaccgccggg 789
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 76/86 (88%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                            
Query: 368      cctccaccgcctcccggggctcgagaccgtcgccgtcgtctcca-gaccaagggcgccaa 426
                |||||| |||||||| ||||||||||||||||||||| ||   | |||||| ||||||||
Sbjct: 31873575 cctccatcgcctccccgggctcgagaccgtcgccgtcatcgggaagaccaatggcgccaa 31873634

                                          
Query: 427      cgtcttcgcctgggacgaccgccggg 452
                | ||||||||||||| ||||||||||
Sbjct: 31873635 cctcttcgcctgggatgaccgccggg 31873660
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>dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1131G08
          Length = 158241

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 76/86 (88%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                         
Query: 368   cctccaccgcctcccggggctcgagaccgtcgccgtcgtctcca-gaccaagggcgccaa 426
             |||||| |||||||| ||||||||||||||||||||| ||   | |||||| ||||||||
Sbjct: 59653 cctccatcgcctccccgggctcgagaccgtcgccgtcatcgggaagaccaatggcgccaa 59712

                                       
Query: 427   cgtcttcgcctgggacgaccgccggg 452
             | ||||||||||||| ||||||||||
Sbjct: 59713 cctcttcgcctgggatgaccgccggg 59738
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 75/86 (87%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                            
Query: 368      cctccaccgcctcccggggctcgagaccgtcgccgtcgtctcca-gaccaagggcgccaa 426
                |||||| |||||||| |||||||||||||||||| || ||   | |||||| ||||||||
Sbjct: 15446672 cctccatcgcctccccgggctcgagaccgtcgccatcatcgggaagaccaatggcgccaa 15446613

                                          
Query: 427      cgtcttcgcctgggacgaccgccggg 452
                | ||||||||||||| ||||||||||
Sbjct: 15446612 cctcttcgcctgggatgaccgccggg 15446587
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>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1299_A11
          Length = 160099

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 75/86 (87%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                         
Query: 368   cctccaccgcctcccggggctcgagaccgtcgccgtcgtctcca-gaccaagggcgccaa 426
             |||||| |||||||| |||||||||||||||||| || ||   | |||||| ||||||||
Sbjct: 95964 cctccatcgcctccccgggctcgagaccgtcgccatcatcgggaagaccaatggcgccaa 95905

                                       
Query: 427   cgtcttcgcctgggacgaccgccggg 452
             | ||||||||||||| ||||||||||
Sbjct: 95904 cctcttcgcctgggatgaccgccggg 95879
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 68/78 (87%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                            
Query: 376      gcctcccggggctcgagaccgtcgccgtcgtctcca-gaccaagggcgccaacgtcttcg 434
                ||||||| |||||||||||||||| |||| ||   | |||||| ||||||||| ||||||
Sbjct: 19184767 gcctccccgggctcgagaccgtcgtcgtcatcgggaagaccaatggcgccaacctcttcg 19184708

                                  
Query: 435      cctgggacgaccgccggg 452
                ||||||| ||||||||||
Sbjct: 19184707 cctgggatgaccgccggg 19184690
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>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21,
              complete sequence
          Length = 151936

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 68/78 (87%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                          
Query: 376    gcctcccggggctcgagaccgtcgccgtcgtctcca-gaccaagggcgccaacgtcttcg 434
              ||||||| |||||||||||||||| |||| ||   | |||||| ||||||||| ||||||
Sbjct: 118288 gcctccccgggctcgagaccgtcgtcgtcatcgggaagaccaatggcgccaacctcttcg 118229

                                
Query: 435    cctgggacgaccgccggg 452
              ||||||| ||||||||||
Sbjct: 118228 cctgggatgaccgccggg 118211
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>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 311   cgccatggaggccagcgccagccgcg 336
             |||||||| |||||||||||||||||
Sbjct: 52875 cgccatggcggccagcgccagccgcg 52850
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>emb|AL591492.11| Zebrafish DNA sequence from clone BUSM1-261O22 in linkage group 20
             Contains a novel gene similar to FKBP3 (FK506 binding
             protein 3), a novel gene for a protein similar to pre-mRNA
             processing proteins, a novel retrotransposon and two CpG
             islands, complete sequence
          Length = 92083

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 292   tctggcgccgcgcgccctccgccatg 317
             |||| |||||||||||||||||||||
Sbjct: 12438 tctgtcgccgcgcgccctccgccatg 12413
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>ref|XM_521899.1| PREDICTED: Pan troglodytes similar to carbohydrate (keratan sulfate
           Gal-6) sulfotransferase 1; carbohydrate (chondroitin
           6/keratan) sulfotransferase 1 (LOC466500), mRNA
          Length = 1599

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 325 gcgccagccgcgacctcctgc 345
           |||||||||||||||||||||
Sbjct: 716 gcgccagccgcgacctcctgc 736
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>ref|NM_003654.2| Homo sapiens carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
            (CHST1), mRNA
          Length = 2734

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 325  gcgccagccgcgacctcctgc 345
            |||||||||||||||||||||
Sbjct: 1024 gcgccagccgcgacctcctgc 1044
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>gb|BC028235.1| Homo sapiens carbohydrate (keratan sulfate Gal-6) sulfotransferase
           1, mRNA (cDNA clone MGC:40025 IMAGE:5245338), complete
           cds
          Length = 2453

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 325 gcgccagccgcgacctcctgc 345
           |||||||||||||||||||||
Sbjct: 692 gcgccagccgcgacctcctgc 712
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>gb|AY339617.1| Homo sapiens carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
             (CHST1) gene, complete cds
          Length = 18954

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 325   gcgccagccgcgacctcctgc 345
             |||||||||||||||||||||
Sbjct: 16696 gcgccagccgcgacctcctgc 16716
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>gb|AC087442.13| Homo sapiens chromosome 11, clone RP11-495O11, complete sequence
          Length = 200269

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 325   gcgccagccgcgacctcctgc 345
             |||||||||||||||||||||
Sbjct: 75762 gcgccagccgcgacctcctgc 75742
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>gb|BC022567.1| Homo sapiens carbohydrate (keratan sulfate Gal-6) sulfotransferase 1,
            mRNA (cDNA clone MGC:27060 IMAGE:4814499), complete cds
          Length = 2734

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 325  gcgccagccgcgacctcctgc 345
            |||||||||||||||||||||
Sbjct: 1024 gcgccagccgcgacctcctgc 1044
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>gb|AF090137.1|AF090137 Homo sapiens carbohydrate sulfotransferase 1 (CHST1) mRNA, complete
           cds
          Length = 1241

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 325 gcgccagccgcgacctcctgc 345
           |||||||||||||||||||||
Sbjct: 357 gcgccagccgcgacctcctgc 377
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>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence
          Length = 230278

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 342    ctgctctcgctctccgagtgg 362
              |||||||||||||||||||||
Sbjct: 127851 ctgctctcgctctccgagtgg 127871
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>gb|U65637.1|HSU65637 Homo sapiens chondroitin-6-sulfotransferase mRNA, complete cds
          Length = 2190

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 325 gcgccagccgcgacctcctgc 345
           |||||||||||||||||||||
Sbjct: 477 gcgccagccgcgacctcctgc 497
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>dbj|AB003791.1| Homo sapiens mRNA for keratan sulfate Gal-6-sulfotransferase,
           complete cds
          Length = 2415

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 325 gcgccagccgcgacctcctgc 345
           |||||||||||||||||||||
Sbjct: 719 gcgccagccgcgacctcctgc 739
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>gb|AC166710.7| Mus musculus chromosome 1, clone RP24-252K15, complete sequence
          Length = 156244

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 325    gcgccagccgcgacctcctgctct 348
              |||||||||||| |||||||||||
Sbjct: 148815 gcgccagccgcggcctcctgctct 148838
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>ref|XM_466121.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 408

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 392 gaccgtcgccgtcgtctcca 411
           ||||||||||||||||||||
Sbjct: 268 gaccgtcgccgtcgtctcca 287
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 236    cgacggcgagatccggagggacgg 259
              ||||||||||||||||| ||||||
Sbjct: 697313 cgacggcgagatccggatggacgg 697336
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>ref|XM_417734.1| PREDICTED: Gallus gallus similar to LOC394859 protein (LOC419587),
           mRNA
          Length = 2206

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 319 aggccagcgccagccgcgac 338
           ||||||||||||||||||||
Sbjct: 391 aggccagcgccagccgcgac 372
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>gb|AY461452.1| Rattus norvegicus Shank1 mRNA, 3' UTR
          Length = 2350

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 2    ccccacccccaaccttttcctcct 25
            ||||||||||| ||||||||||||
Sbjct: 1256 ccccacccccagccttttcctcct 1279
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>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence
          Length = 574126

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 326    cgccagccgcgacctcctgc 345
              ||||||||||||||||||||
Sbjct: 238284 cgccagccgcgacctcctgc 238265
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>ref|XM_540763.2| PREDICTED: Canis familiaris similar to carbohydrate (keratan
           sulfate Gal-6) sulfotransferase 1, transcript variant 1
           (LOC483642), mRNA
          Length = 1848

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 325 gcgccagccgcgacctcctg 344
           ||||||||||||||||||||
Sbjct: 919 gcgccagccgcgacctcctg 938
to top
>ref|XM_845613.1| PREDICTED: Canis familiaris similar to carbohydrate (keratan sulfate
            Gal-6) sulfotransferase 1, transcript variant 2
            (LOC483642), mRNA
          Length = 1978

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 325  gcgccagccgcgacctcctg 344
            ||||||||||||||||||||
Sbjct: 1049 gcgccagccgcgacctcctg 1068
to top
>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12
          Length = 286550

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 76     ccgatcgcgccggcccggccatgg 99
              |||| |||||||||||||||||||
Sbjct: 266684 ccgaccgcgccggcccggccatgg 266707
to top
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   cgccccccgccgacggcgag 245
             ||||||||||||||||||||
Sbjct: 96673 cgccccccgccgacggcgag 96692
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>emb|AL593857.10| Mouse DNA sequence from clone RP23-439H2 on chromosome 2, complete
              sequence
          Length = 206452

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      ccccacccccaaccttttcc 21
              ||||||||||||||||||||
Sbjct: 167604 ccccacccccaaccttttcc 167585
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>dbj|AK145499.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched
           library, clone:I1C0007J20 product:heterogeneous nuclear
           ribonucleoprotein U, full insert sequence
          Length = 3406

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 325 gcgccagccgcgacctcctgctct 348
           |||||||||||| |||||||||||
Sbjct: 458 gcgccagccgcggcctcctgctct 435
to top
>dbj|AK159084.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
           library, clone:I420001B22 product:heterogeneous nuclear
           ribonucleoprotein U, full insert sequence
          Length = 2901

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 325 gcgccagccgcgacctcctgctct 348
           |||||||||||| |||||||||||
Sbjct: 424 gcgccagccgcggcctcctgctct 401
to top
>dbj|AK145682.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched
           library, clone:I1C0029C11 product:heterogeneous nuclear
           ribonucleoprotein U, full insert sequence
          Length = 3404

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 325 gcgccagccgcgacctcctgctct 348
           |||||||||||| |||||||||||
Sbjct: 457 gcgccagccgcggcctcctgctct 434
to top
>dbj|AK162264.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
           enriched library, clone:7420489N23 product:heterogeneous
           nuclear ribonucleoprotein U, full insert sequence
          Length = 1969

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 325 gcgccagccgcgacctcctgctct 348
           |||||||||||| |||||||||||
Sbjct: 460 gcgccagccgcggcctcctgctct 437
to top
>dbj|AK159956.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
           library, clone:I420039N16 product:heterogeneous nuclear
           ribonucleoprotein U, full insert sequence
          Length = 3348

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 325 gcgccagccgcgacctcctgctct 348
           |||||||||||| |||||||||||
Sbjct: 397 gcgccagccgcggcctcctgctct 374
to top
>dbj|AK168657.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:I920041N14 product:heterogeneous nuclear
           ribonucleoprotein U, full insert sequence
          Length = 3341

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 325 gcgccagccgcgacctcctgctct 348
           |||||||||||| |||||||||||
Sbjct: 397 gcgccagccgcggcctcctgctct 374
to top
>dbj|AK159614.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
           library, clone:I420025L06 product:heterogeneous nuclear
           ribonucleoprotein U, full insert sequence
          Length = 3404

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 325 gcgccagccgcgacctcctgctct 348
           |||||||||||| |||||||||||
Sbjct: 460 gcgccagccgcggcctcctgctct 437
to top
>dbj|AK167200.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched
           library, clone:I1C0038M11 product:heterogeneous nuclear
           ribonucleoprotein U, full insert sequence
          Length = 3404

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 325 gcgccagccgcgacctcctgctct 348
           |||||||||||| |||||||||||
Sbjct: 457 gcgccagccgcggcctcctgctct 434
to top
>dbj|AK165844.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched
           library, clone:G730006M20 product:heterogeneous nuclear
           ribonucleoprotein U, full insert sequence
          Length = 3670

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 325 gcgccagccgcgacctcctgctct 348
           |||||||||||| |||||||||||
Sbjct: 455 gcgccagccgcggcctcctgctct 432
to top
>dbj|AK089058.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430038A15
           product:heterogeneous nuclear ribonucleoprotein U, full
           insert sequence
          Length = 2934

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 325 gcgccagccgcgacctcctgctct 348
           |||||||||||| |||||||||||
Sbjct: 456 gcgccagccgcggcctcctgctct 433
to top
>dbj|AK037517.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130023B09 product:heterogeneous
           nuclear ribonucleoprotein U, full insert sequence
          Length = 2594

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 325 gcgccagccgcgacctcctgctct 348
           |||||||||||| |||||||||||
Sbjct: 397 gcgccagccgcggcctcctgctct 374
to top
>dbj|AK029944.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4932409F19 product:heterogeneous nuclear
           ribonucleoprotein U, full insert sequence
          Length = 2848

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 325 gcgccagccgcgacctcctgctct 348
           |||||||||||| |||||||||||
Sbjct: 401 gcgccagccgcggcctcctgctct 378
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 392      gaccgtcgccgtcgtctcca 411
                ||||||||||||||||||||
Sbjct: 20532561 gaccgtcgccgtcgtctcca 20532580
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 362     ggtcgccctccaccgcctcc 381
               ||||||||||||||||||||
Sbjct: 1180239 ggtcgccctccaccgcctcc 1180220



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 362     ggtcgccctccaccgcctcc 381
               ||||||||||||||||||||
Sbjct: 1159707 ggtcgccctccaccgcctcc 1159726



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 362     ggtcgccctccaccgcctcc 381
               ||||||||||||||||||||
Sbjct: 1154985 ggtcgccctccaccgcctcc 1155004



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 362     ggtcgccctccaccgcctcc 381
               ||||||||||||||||||||
Sbjct: 1151814 ggtcgccctccaccgcctcc 1151833



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 362     ggtcgccctccaccgcctcc 381
               ||||||||||||||||||||
Sbjct: 1145952 ggtcgccctccaccgcctcc 1145971
to top
>gb|AF275943.1|AF275943 Streptomyces avermitilis avermectin polyketide synthase gene, partial
            cds
          Length = 11096

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 362  ggtcgccctccaccgcctcc 381
            ||||||||||||||||||||
Sbjct: 8256 ggtcgccctccaccgcctcc 8275
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 224     gccgccccccgccgacggcg 243
               ||||||||||||||||||||
Sbjct: 3122420 gccgccccccgccgacggcg 3122401
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>dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0051E21
          Length = 137959

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 392   gaccgtcgccgtcgtctcca 411
             ||||||||||||||||||||
Sbjct: 28119 gaccgtcgccgtcgtctcca 28138
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>emb|AL929537.17| Mouse DNA sequence from clone RP23-147E9 on chromosome 2, complete
             sequence
          Length = 93822

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     ccccacccccaaccttttcc 21
             ||||||||||||||||||||
Sbjct: 46104 ccccacccccaaccttttcc 46123
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>ref|XM_564742.1| Anopheles gambiae str. PEST ENSANGP00000026106 (ENSANGG00000007050),
            partial mRNA
          Length = 1758

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   ccaaccttttcctcctccca 29
            ||||||||||||||||||||
Sbjct: 1076 ccaaccttttcctcctccca 1057
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>ref|XM_308365.2| Anopheles gambiae str. PEST ENSANGP00000009420 (ENSANGG00000007050),
            partial mRNA
          Length = 5044

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   ccaaccttttcctcctccca 29
            ||||||||||||||||||||
Sbjct: 4362 ccaaccttttcctcctccca 4343
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 432     tcgcctgggacgaccgccgg 451
               ||||||||||||||||||||
Sbjct: 1057991 tcgcctgggacgaccgccgg 1058010
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>gb|BC018353.1| Mus musculus heterogeneous nuclear ribonucleoprotein U, mRNA (cDNA
           clone MGC:5768 IMAGE:3584692), complete cds
          Length = 3272

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 325 gcgccagccgcgacctcctgctct 348
           |||||||||||| |||||||||||
Sbjct: 300 gcgccagccgcggcctcctgctct 277
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>emb|CT571256.7| Mouse DNA sequence from clone RP24-135B13 on chromosome 13, complete
             sequence
          Length = 183340

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     gccccacccccaaccttttc 20
             ||||||||||||||||||||
Sbjct: 27441 gccccacccccaaccttttc 27460
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>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster,
             partial and complete cds
          Length = 113234

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   ccgccgacggcgagatccgg 251
             ||||||||||||||||||||
Sbjct: 93405 ccgccgacggcgagatccgg 93386
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>dbj|AB032367.1| Streptomyces avermitilis polyketide synthase gene cluster (aveA1,
             aveA2, aveA3, aveA4) and aveC, aveE genes, complete cds
          Length = 64957

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 362   ggtcgccctccaccgcctcc 381
             ||||||||||||||||||||
Sbjct: 42523 ggtcgccctccaccgcctcc 42504



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   ggtcgccctccaccgcctcc 381
             ||||||||||||||||||||
Sbjct: 21991 ggtcgccctccaccgcctcc 22010



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   ggtcgccctccaccgcctcc 381
             ||||||||||||||||||||
Sbjct: 17269 ggtcgccctccaccgcctcc 17288



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   ggtcgccctccaccgcctcc 381
             ||||||||||||||||||||
Sbjct: 14098 ggtcgccctccaccgcctcc 14117



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 362  ggtcgccctccaccgcctcc 381
            ||||||||||||||||||||
Sbjct: 8236 ggtcgccctccaccgcctcc 8255


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,028,862
Number of Sequences: 3902068
Number of extensions: 3028862
Number of successful extensions: 79919
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78835
Number of HSP's gapped (non-prelim): 1077
length of query: 456
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 434
effective length of database: 17,147,199,772
effective search space: 7441884701048
effective search space used: 7441884701048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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