>EPIPL_HUMAN (P58107) Epiplakin (450 kDa epidermal antigen)|
          Length = 5065

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -2

Query: 188  EVQVLHRLPLHRAAEPSRAERICQHRLRS-PGGRSVGRWWDLISLC 54
            E   LH LPL  +A     E   Q  L++ PG +     WDL+S C
Sbjct: 1081 ETSGLHLLPLPESAPALPTEEQVQRSLQAVPGAKDGTSLWDLLSSC 1126

>POLN_HEVBU (P29324) Non-structural polyprotein (EC 2.7.7.48) (RNA-directed RNA|
           polymerase/Helicase)
          Length = 1693

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +3

Query: 69  IPPPTDRPAAGRSEPVLADPLRSARLGG-AMEWETVQH 179
           +PPP   P+   S P LA+P   A  G  A+  +T +H
Sbjct: 740 LPPPAPDPSPPPSAPALAEPASGATAGAPAITHQTARH 777

>CXA3_SHEEP (Q9TU17) Gap junction alpha-3 protein (Connexin-44) (Cx44)|
          Length = 412

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +3

Query: 18  HLLVSSPGEERRAERDQIPPPTDRPAAGRSEPV-LADPLRSARLGGAM 158
           H+L     EE+R ER++ PP    PA    +P  + D     R+ GA+
Sbjct: 94  HVLHLVRMEEKRKEREEEPPKAAGPAEEHQDPAPVRDDRGKVRIAGAL 141

>CKLF2_HUMAN (Q8TAZ6) CKLF-like MARVEL transmembrane domain-containing protein 2|
           (Chemokine-like factor superfamily member 2)
          Length = 248

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 9   AESHLLVSSPGEERRAERDQIPPPTDRPAAGR 104
           A+ H+LV  PG+E+  ++ + P P   P  G+
Sbjct: 208 AKKHMLVPPPGKEKGPQQGKGPEPAKPPEPGK 239


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,051,675
Number of Sequences: 219361
Number of extensions: 690797
Number of successful extensions: 2770
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2769
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)