ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl46d02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 133 bits (67), Expect = 5e-28 Identities = 76/79 (96%) Strand = Plus / Plus Query: 303 aatttgatgctttgactggaagcaagatagctttggttgaccttggagctcgtgttgttc 362 |||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 14351020 aatttgatgcattgactggaagcaagatagcttcgattgaccttggagctcgtgttgttc 14351079 Query: 363 gtatggcatatagccctac 381 ||||||||||||||||||| Sbjct: 14351080 gtatggcatatagccctac 14351098 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 153 gcgatggagtgggagacggtgcagcacctggacctccgcc 192 ||||||||||||| |||||||||||||||||| ||||||| Sbjct: 14350017 gcgatggagtgggcgacggtgcagcacctggatctccgcc 14350056 Score = 48.1 bits (24), Expect = 0.024 Identities = 42/48 (87%) Strand = Plus / Plus Query: 255 ttccgcgcctcccaagccattgtcgccgtcgccgtcggcacccacgtc 302 |||||||| || || ||||| |||||||||||| ||||||| |||||| Sbjct: 14350113 ttccgcgcgtcgcaggccatcgtcgccgtcgccatcggcacgcacgtc 14350160 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 257 ccgcgcctcccaagccattgtcgccgtcgccg 288 ||||||| | ||| |||||||||||||||||| Sbjct: 9567085 ccgcgcccctcaaaccattgtcgccgtcgccg 9567054
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 133 bits (67), Expect = 5e-28 Identities = 76/79 (96%) Strand = Plus / Plus Query: 303 aatttgatgctttgactggaagcaagatagctttggttgaccttggagctcgtgttgttc 362 |||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 42823 aatttgatgcattgactggaagcaagatagcttcgattgaccttggagctcgtgttgttc 42882 Query: 363 gtatggcatatagccctac 381 ||||||||||||||||||| Sbjct: 42883 gtatggcatatagccctac 42901 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 153 gcgatggagtgggagacggtgcagcacctggacctccgcc 192 ||||||||||||| |||||||||||||||||| ||||||| Sbjct: 41820 gcgatggagtgggcgacggtgcagcacctggatctccgcc 41859 Score = 48.1 bits (24), Expect = 0.024 Identities = 42/48 (87%) Strand = Plus / Plus Query: 255 ttccgcgcctcccaagccattgtcgccgtcgccgtcggcacccacgtc 302 |||||||| || || ||||| |||||||||||| ||||||| |||||| Sbjct: 41916 ttccgcgcgtcgcaggccatcgtcgccgtcgccatcggcacgcacgtc 41963
>gb|AC116856.8| Mus musculus chromosome 14, clone RP24-403P16, complete sequence Length = 196560 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagc 60 ||||||||||||||||||||||| Sbjct: 134300 aggagaggagaggagagcagagc 134278
>gb|AC113277.8| Mus musculus chromosome 3, clone RP23-386C15, complete sequence Length = 210390 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagagc 60 ||||||||||||||||||||||| Sbjct: 166437 aggagaggagaggagagcagagc 166459
>gb|AC124705.4| Mus musculus BAC clone RP24-68G21 from chromosome 14, complete sequence Length = 175961 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagc 60 ||||||||||||||||||||||| Sbjct: 13820 aggagaggagaggagagcagagc 13798
>gb|AC123055.3| Mus musculus BAC clone RP24-267D17 from chromosome 3, complete sequence Length = 187323 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagc 60 ||||||||||||||||||||||| Sbjct: 15552 aggagaggagaggagagcagagc 15530
>gb|AC124187.3| Mus musculus BAC clone RP23-237I24 from 18, complete sequence Length = 172828 Score = 46.1 bits (23), Expect = 0.093 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagagcgagatcaaatcc 72 ||||||||||||||||| |||| |||||||||||| Sbjct: 68970 aggagaggagaggagaggagag-gagatcaaatcc 69003
>gb|AC123957.4| Mus musculus BAC clone RP23-302N2 from 12, complete sequence Length = 206661 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagagc 60 ||||||||||||||||||||||| Sbjct: 106581 aggagaggagaggagagcagagc 106603
>gb|AC069559.27| Mus musculus strain C57BL/6J clone rp23-136j2 map 9, complete sequence Length = 185365 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagagc 60 ||||||||||||||||||||||| Sbjct: 182400 aggagaggagaggagagcagagc 182422
>gb|AC104113.3| Homo sapiens chromosome 5 clone RP11-231G3, complete sequence Length = 105743 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagc 60 ||||||||||||||||||||||| Sbjct: 81093 aggagaggagaggagagcagagc 81071
>gb|AC022681.8| Homo sapiens chromosome 8, clone RP11-731D24, complete sequence Length = 219658 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagc 60 ||||||||||||||||||||||| Sbjct: 118493 aggagaggagaggagagcagagc 118471
>gb|AC155273.3| Mus musculus BAC clone RP23-36K2 from chromosome 12, complete sequence Length = 198927 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagc 60 ||||||||||||||||||||||| Sbjct: 114679 aggagaggagaggagagcagagc 114657
>ref|NM_205242.1| Gallus gallus low density lipoprotein-related protein 1 (LRP1), mRNA Length = 15598 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Minus Query: 123 gatccgctccgctcggctcggctcggc 149 ||||||||| ||||||||||||||||| Sbjct: 1232 gatccgctcggctcggctcggctcggc 1206
>emb|X74904.1|GGLRPA2MR G.gallus mRNA for LRP/alpha-2-macroglobulin receptor Length = 15598 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Minus Query: 123 gatccgctccgctcggctcggctcggc 149 ||||||||| ||||||||||||||||| Sbjct: 1232 gatccgctcggctcggctcggctcggc 1206
>emb|V01270.1|RNRRNA Rattus norvegicus genes for 18S, 5.8S, and 28S ribosomal RNAs Length = 8647 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagcgaga 64 ||||||||||||||||| ||||||||| Sbjct: 3814 aggagaggagaggagaggagagcgaga 3788
>emb|X00722.1|RNRRNA04 Rat 32S pre-rRNA 5'-terminal part with 28S rRNA sequence Length = 2412 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagcgaga 64 ||||||||||||||||| ||||||||| Sbjct: 1045 aggagaggagaggagaggagagcgaga 1019
>dbj|AP002782.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-660M18, complete sequences Length = 153078 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagc 60 ||||||||||||||||||||||| Sbjct: 475 aggagaggagaggagagcagagc 453 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 450 aggagaggagaggagagcagag 429
>dbj|AP000651.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-88K4, complete sequences Length = 74994 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagc 60 ||||||||||||||||||||||| Sbjct: 72763 aggagaggagaggagagcagagc 72741 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 72738 aggagaggagaggagagcagag 72717
>emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on chromosome 4, complete sequence Length = 227816 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagagcgaga 64 ||||||||||||||||| ||||||||| Sbjct: 21268 aggagaggagaggagaggagagcgaga 21294
>gb|AC069563.28| Mus musculus strain C57BL/6J chromosome 9 clone rp23-477j18, complete sequence Length = 188584 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagc 60 ||||||||||||||||||||||| Sbjct: 175300 aggagaggagaggagagcagagc 175278
>emb|AL844551.3| Mouse DNA sequence from clone RP23-117M21 on chromosome 2, complete sequence Length = 172378 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagc 60 ||||||||||||||||||||||| Sbjct: 137337 aggagaggagaggagagcagagc 137315
>gb|AC135237.6| Mus musculus BAC clone RP23-306F11 from chromosome 3, complete sequence Length = 199436 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagc 60 ||||||||||||||||||||||| Sbjct: 143390 aggagaggagaggagagcagagc 143368
>gb|AC101932.9| Mus musculus chromosome 7, clone RP24-66E13, complete sequence Length = 214419 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagagc 60 ||||||||||||||||||||||| Sbjct: 108924 aggagaggagaggagagcagagc 108946
>gb|J00781.1|RATRGEB4 rat 45s ribosomal rna gene cluster: 5.8s (complete); 18s (3'-end); 28s (5'-end); spacer sequences itsi & itsii Length = 2282 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagcgaga 64 ||||||||||||||||| ||||||||| Sbjct: 2167 aggagaggagaggagaggagagcgaga 2141
>gb|AC099645.11| Mus musculus chromosome 15, clone RP23-426G4, complete sequence Length = 208095 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 180323 aggagaggagaggagagcagag 180344
>gb|AC110553.10| Mus musculus chromosome 3, clone RP23-248D8, complete sequence Length = 206620 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 20700 aggagaggagaggagagcagag 20679
>gb|AC100269.7| Mus musculus chromosome 5, clone RP23-67B9, complete sequence Length = 237273 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 53608 aggagaggagaggagagcagag 53629
>gb|AC166650.7| Mus musculus chromosome 5, clone RP23-434O9, complete sequence Length = 207176 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 78782 aggagaggagaggagagcagag 78803
>gb|AC107774.8| Mus musculus chromosome 5, clone RP23-99A9, complete sequence Length = 227044 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 128666 aggagaggagaggagagcagag 128645 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 ccaggagaggagaggagagcagag 59 ||||||||||||||||||| |||| Sbjct: 128733 ccaggagaggagaggagaggagag 128710
>gb|AC166649.5| Mus musculus chromosome 5, clone RP23-379D24, complete sequence Length = 176315 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 146898 aggagaggagaggagagcagag 146877
>gb|AC161807.12| Mus musculus chromosome 1, clone RP24-229G16, complete sequence Length = 144324 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcggc 149 |||||||||||||||||||||| Sbjct: 104615 gctccgctcggctcggctcggc 104636 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcggc 149 |||||||||||||||||||||| Sbjct: 104595 gctccgctcggctcggctcggc 104616 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 tccgctccgctcggctcggctcggc 149 ||||||| ||||||||||||||||| Sbjct: 104617 tccgctcggctcggctcggctcggc 104641
>gb|AC161510.10| Mus musculus chromosome 5, clone RP23-7M16, complete sequence Length = 195579 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 18227 aggagaggagaggagagcagag 18206 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 ccaggagaggagaggagagcagag 59 ||||||||||||||||||| |||| Sbjct: 18294 ccaggagaggagaggagaggagag 18271
>gb|AC157931.11| Mus musculus chromosome 5, clone RP24-159I10, complete sequence Length = 147518 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 39 ggagaggagaggagagcagagc 60 |||||||||||||||||||||| Sbjct: 56301 ggagaggagaggagagcagagc 56322
>gb|AC161434.2| Mus musculus chromosome 3, clone RP23-7K18, complete sequence Length = 195815 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 83235 aggagaggagaggagagcagag 83214
>gb|AC163008.9| Mus musculus chromosome 15, clone RP23-105P11, complete sequence Length = 211071 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 108531 aggagaggagaggagagcagag 108510
>gb|BC065534.1| Homo sapiens ATG9 autophagy related 9 homolog A (S. cerevisiae), mRNA (cDNA clone MGC:70685 IMAGE:5787445), complete cds Length = 3789 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 128 gctccgctcggctcggctcggc 149 |||||||||||||||||||||| Sbjct: 52 gctccgctcggctcggctcggc 31 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 125 tccgctccgctcggctcggctcggcg 150 ||||||| |||||||||||||||||| Sbjct: 50 tccgctcggctcggctcggctcggcg 25
>gb|AC163328.6| Mus musculus chromosome 5, clone RP24-405J8, complete sequence Length = 141045 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 33900 aggagaggagaggagagcagag 33921
>gb|AC113504.10| Mus musculus chromosome 5, clone RP23-370G17, complete sequence Length = 219617 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 39 ggagaggagaggagagcagagc 60 |||||||||||||||||||||| Sbjct: 190514 ggagaggagaggagagcagagc 190535
>gb|AC135048.2| Homo sapiens chromosome 16 clone RP11-1072A3, complete sequence Length = 177719 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 33 tccccaggagaggagaggagag 54 |||||||||||||||||||||| Sbjct: 19478 tccccaggagaggagaggagag 19457
>gb|AC125223.3| Mus musculus BAC clone RP23-31C10 from 13, complete sequence Length = 221903 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 148189 aggagaggagaggagagcagag 148168
>gb|AC125049.3| Mus musculus BAC clone RP23-367C15 from chromosome 9, complete sequence Length = 211511 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 155834 aggagaggagaggagagcagag 155855 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcaga 58 ||||||||||||||||||||| Sbjct: 155929 aggagaggagaggagagcaga 155949 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gagaggagaggagagcagag 59 |||||||||||||||||||| Sbjct: 155666 gagaggagaggagagcagag 155685
>gb|AC115721.11| Mus musculus chromosome 3, clone RP23-9P8, complete sequence Length = 218746 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 184047 aggagaggagaggagagcagag 184068
>gb|AC160549.5| Mus musculus chromosome 3, clone RP23-276K18, complete sequence Length = 157222 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 80397 aggagaggagaggagagcagag 80418
>gb|AC102116.8| Mus musculus chromosome 3, clone RP23-149A10, complete sequence Length = 204383 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 87162 aggagaggagaggagagcagag 87183
>gb|AC118590.11| Mus musculus chromosome 15, clone RP24-506N7, complete sequence Length = 155519 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 142862 aggagaggagaggagagcagag 142841
>gb|AC099533.36| Pan troglodytes clone rp43-41g5, complete sequence Length = 226331 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 196140 aggagaggagaggagagcagag 196119
>emb|AL022310.1|HS395P12 Human DNA sequence from clone RP3-395P12 on chromosome 1q24-25 Contains a glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)(GOT2) pseudogene, a novel gene and the TNFSF4 gene for tumor necrosis factor (ligand) superfamily, member 4 (tax-transcriptionally activated glycoprotein 1, 34kDa), complete sequence Length = 147724 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 132900 aggagaggagaggagagcagag 132921
>gb|AF192133.1| Fontinalis welchiana isolate FW601 internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 938 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcggcggcg 153 |||| ||||||||||||||||||||| Sbjct: 185 gctcggctcggctcggctcggcggcg 210
>gb|AF192112.1| Fontinalis sullivantii isolate FS490 internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 915 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcggcggcg 153 |||| ||||||||||||||||||||| Sbjct: 175 gctcggctcggctcggctcggcggcg 200
>gb|AF192106.1| Fontinalis missourica internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 929 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcggcggcg 153 |||| ||||||||||||||||||||| Sbjct: 175 gctcggctcggctcggctcggcggcg 200
>emb|BX537984.1|HSM806115 Homo sapiens mRNA; cDNA DKFZp686G18201 (from clone DKFZp686G18201); complete cds Length = 3816 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 128 gctccgctcggctcggctcggc 149 |||||||||||||||||||||| Sbjct: 35 gctccgctcggctcggctcggc 14 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 125 tccgctccgctcggctcggctcggcg 150 ||||||| |||||||||||||||||| Sbjct: 33 tccgctcggctcggctcggctcggcg 8
>emb|AL928857.15| Mouse DNA sequence from clone RP24-499A8 on chromosome 11 Contains the 5' end of the Gemin5 gene for gem (nuclear organelle) associated protein 5, a novel gene, a interferon gamma inducible protein (Ifi47) pseudogene, the Igtp gene for interferon gamma induced GTPase, the Gtpi-pending gene for interferon-g induced GTPase, a novel gene and one CpG island, complete sequence Length = 133633 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 104001 aggagaggagaggagagcagag 103980
>emb|AL805940.7| Mouse DNA sequence from clone RP24-286B19 on chromosome 4, complete sequence Length = 128829 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 65008 aggagaggagaggagagcagag 65029
>dbj|AK056595.1| Homo sapiens cDNA FLJ32033 fis, clone NTONG2000265, weakly similar to Probable transmembrane protein of fission yeast Length = 3762 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 128 gctccgctcggctcggctcggc 149 |||||||||||||||||||||| Sbjct: 55 gctccgctcggctcggctcggc 34 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 125 tccgctccgctcggctcggctcggcg 150 ||||||| |||||||||||||||||| Sbjct: 53 tccgctcggctcggctcggctcggcg 28
>gb|AC104298.2| Homo sapiens chromosome 3 clone RP11-96N5, complete sequence Length = 175317 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 42266 aggagaggagaggagagcagag 42245
>gb|AC068946.4| Homo sapiens BAC clone RP11-803J6 from 2, complete sequence Length = 172260 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 125 tccgctccgctcggctcggctcggcg 150 ||||||| |||||||||||||||||| Sbjct: 123935 tccgctcggctcggctcggctcggcg 123960 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcggc 149 |||||||||||||||||||||| Sbjct: 123933 gctccgctcggctcggctcggc 123954
>gb|AC092797.2| Homo sapiens chromosome 3 clone RP11-452E8, complete sequence Length = 200278 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 176809 aggagaggagaggagagcagag 176788
>gb|AC166644.7| Mus musculus chromosome 1, clone RP23-375C6, complete sequence Length = 175851 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 12890 aggagaggagaggagagcagag 12869
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 145 tcggcggcgcgatggagtgggagacg 170 |||||||||||||||| ||||||||| Sbjct: 3569042 tcggcggcgcgatggattgggagacg 3569017
>tpg|BK004018.1| TPA: TPA_exp: Homo sapiens autophagy 9-like 1 protein (APG9L1) mRNA, complete cds Length = 3762 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 128 gctccgctcggctcggctcggc 149 |||||||||||||||||||||| Sbjct: 55 gctccgctcggctcggctcggc 34 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 125 tccgctccgctcggctcggctcggcg 150 ||||||| |||||||||||||||||| Sbjct: 53 tccgctcggctcggctcggctcggcg 28
>dbj|AK030164.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933407H19 product:unclassifiable, full insert sequence Length = 2035 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcggc 149 |||||||||||||||||||||| Sbjct: 723 gctccgctcggctcggctcggc 744 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcggc 149 |||||||||||||||||||||| Sbjct: 703 gctccgctcggctcggctcggc 724 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 tccgctccgctcggctcggctcggc 149 ||||||| ||||||||||||||||| Sbjct: 725 tccgctcggctcggctcggctcggc 749
>gb|AC021887.4|AC021887 Homo sapiens BAC clone RP11-777M17 from 12, complete sequence Length = 194497 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 18092 aggagaggagaggagagcagag 18071
>gb|AC102391.12| Mus musculus chromosome 18, clone RP24-62K22, complete sequence Length = 196455 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 61745 aggagaggagaggagagcagag 61724
>gb|AC092404.2| Mus musculus strain C57BL6/J chromosome 5 clone RP23-261D18, complete sequence Length = 225503 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagcgag 63 ||||||||||||||||| |||||||| Sbjct: 111808 aggagaggagaggagaggagagcgag 111783
>gb|AC135050.3| Homo sapiens chromosome 16 clone RP11-196G11, complete sequence Length = 182230 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 33 tccccaggagaggagaggagag 54 |||||||||||||||||||||| Sbjct: 43131 tccccaggagaggagaggagag 43152
>gb|AC092915.7| Homo sapiens 3 BAC RP11-585F20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187215 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 90175 aggagaggagaggagagcagag 90154
>gb|AC149318.2| Phakopsora pachyrhizi clone JGIAFNA-101K16, complete sequence Length = 38351 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 cgctcggctcggctcggcggcg 153 |||||||||||||||||||||| Sbjct: 33669 cgctcggctcggctcggcggcg 33690
>gb|AC131731.4| Mus musculus BAC clone RP23-117K10 from 3, complete sequence Length = 200232 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 178288 aggagaggagaggagagcagag 178309
>gb|AC119268.12| Mus musculus chromosome 5, clone RP24-324M10, complete sequence Length = 201518 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 130437 aggagaggagaggagagcagag 130416
>gb|AC100745.8| Mus musculus chromosome 15, clone RP24-372F6, complete sequence Length = 168891 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 25034 aggagaggagaggagagcagag 25013
>gb|AC117749.6| Mus musculus chromosome 1, clone RP24-319I19, complete sequence Length = 174793 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 128 gctccgctcggctcggctcggc 149 |||||||||||||||||||||| Sbjct: 161385 gctccgctcggctcggctcggc 161364 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 128 gctccgctcggctcggctcggc 149 |||||||||||||||||||||| Sbjct: 161365 gctccgctcggctcggctcggc 161344 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 125 tccgctccgctcggctcggctcggc 149 ||||||| ||||||||||||||||| Sbjct: 161363 tccgctcggctcggctcggctcggc 161339
>gb|AC161481.4| Mus musculus chromosome 18, clone RP23-336C20, complete sequence Length = 210643 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 179473 aggagaggagaggagagcagag 179452
>gb|AC104898.9| Mus musculus chromosome 8, clone RP23-300I4, complete sequence Length = 181370 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 72678 aggagaggagaggagagcagag 72699 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 72553 aggagaggagaggagagcag 72572
>gb|AC132593.3| Mus musculus BAC clone RP24-218L22 from 3, complete sequence Length = 175976 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 94705 aggagaggagaggagagcagag 94684
>gb|AC168210.13| Mus musculus chromosome 5, clone RP24-72J20, complete sequence Length = 193750 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 166274 aggagaggagaggagagcagag 166253
>ref|NM_024085.2| Homo sapiens ATG9 autophagy related 9 homolog A (S. cerevisiae) (ATG9A), mRNA Length = 3816 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 128 gctccgctcggctcggctcggc 149 |||||||||||||||||||||| Sbjct: 35 gctccgctcggctcggctcggc 14 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 125 tccgctccgctcggctcggctcggcg 150 ||||||| |||||||||||||||||| Sbjct: 33 tccgctcggctcggctcggctcggcg 8
>gb|AC154884.15| Mus musculus chromosome 3, clone RP23-145H17, complete sequence Length = 231400 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagag 59 |||||||||||||||||||||| Sbjct: 51656 aggagaggagaggagagcagag 51677
>emb|AL834347.1|HSM805407 Homo sapiens mRNA; cDNA DKFZp761C1717 (from clone DKFZp761C1717) Length = 3148 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 33 tccccaggagaggagaggagag 54 |||||||||||||||||||||| Sbjct: 1019 tccccaggagaggagaggagag 998
>gb|AC167921.2| Mycosphaerella graminicola clone JGIBBWB-5J17, complete sequence Length = 41280 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 cattgtcgccgtcgccgtcgg 292 ||||||||||||||||||||| Sbjct: 9804 cattgtcgccgtcgccgtcgg 9784
>ref|XM_515455.1| PREDICTED: Pan troglodytes LOC459211 (LOC459211), mRNA Length = 5712 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 tgcagcacctggacctccgcc 192 ||||||||||||||||||||| Sbjct: 1277 tgcagcacctggacctccgcc 1297
>ref|NM_183034.1| Mus musculus pleckstrin homology domain containing, family M (with RUN domain) member 1 (Plekhm1), mRNA Length = 5144 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 caggagaggagaggagagcagagcg 61 ||||||||||||| ||||||||||| Sbjct: 4451 caggagaggagagcagagcagagcg 4427
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 ggcgcgatggagtgggagacggtgc 174 |||||| |||||||||||||||||| Sbjct: 411680 ggcgcggtggagtgggagacggtgc 411704
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09 map S1559, complete sequence Length = 190721 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 ctccgctcggctcggctcggc 149 ||||||||||||||||||||| Sbjct: 176000 ctccgctcggctcggctcggc 175980
>gb|BC106687.1| Xenopus laevis cDNA clone IMAGE:4203831, partial cds Length = 1150 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 agatcaaatcccaccaccgac 82 ||||||||||||||||||||| Sbjct: 169 agatcaaatcccaccaccgac 149
>gb|BC077280.1| Xenopus laevis hypothetical protein LOC398863, mRNA (cDNA clone MGC:80061 IMAGE:4404521), complete cds Length = 2648 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 agatcaaatcccaccaccgac 82 ||||||||||||||||||||| Sbjct: 89 agatcaaatcccaccaccgac 69
>gb|BC053079.1| Mus musculus pleckstrin homology domain containing, family M (with RUN domain) member 1, mRNA (cDNA clone MGC:62451 IMAGE:5702529), complete cds Length = 5144 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 caggagaggagaggagagcagagcg 61 ||||||||||||| ||||||||||| Sbjct: 4451 caggagaggagagcagagcagagcg 4427
>gb|AC140336.2| Mus musculus BAC clone RP24-266F17 from chromosome 18, complete sequence Length = 186205 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcaga 58 ||||||||||||||||||||| Sbjct: 151373 aggagaggagaggagagcaga 151353
>gb|BC038943.1| Mus musculus pleckstrin homology domain containing, family M (with RUN domain) member 1, mRNA (cDNA clone IMAGE:4238382), partial cds Length = 2812 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 caggagaggagaggagagcagagcg 61 ||||||||||||| ||||||||||| Sbjct: 2117 caggagaggagagcagagcagagcg 2093
>gb|BC060431.1| Xenopus laevis hypothetical protein LOC398863, mRNA (cDNA clone IMAGE:4201960), partial cds Length = 1075 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 agatcaaatcccaccaccgac 82 ||||||||||||||||||||| Sbjct: 94 agatcaaatcccaccaccgac 74
>ref|XM_567741.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNK01410) partial mRNA Length = 3652 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 150 ggcgcgatggagtgggagacggtgc 174 |||||| |||||||||||||||||| Sbjct: 2873 ggcgcggtggagtgggagacggtgc 2849
>gb|AC140207.3| Mus musculus BAC clone RP24-446P10 from chromosome 18, complete sequence Length = 185316 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcaga 58 ||||||||||||||||||||| Sbjct: 163328 aggagaggagaggagagcaga 163348
>gb|AC111008.6| Mus musculus BAC clone RP23-415J21 from chromosome 7, complete sequence Length = 193593 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcaga 58 ||||||||||||||||||||| Sbjct: 137951 aggagaggagaggagagcaga 137971
>gb|AC124722.3| Mus musculus BAC clone RP23-389E7 from chromosome 6, complete sequence Length = 193830 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagcgagatc 66 ||||||||||||||||| |||||| |||| Sbjct: 79074 aggagaggagaggagaggagagcgcgatc 79046
>gb|AC110302.4| Mus musculus BAC clone RP24-194G21 from 12, complete sequence Length = 168601 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 35 cccaggagaggagaggagagcagag 59 |||||||||||||||||||| |||| Sbjct: 45083 cccaggagaggagaggagaggagag 45059
>emb|CR731819.2|CNS0GRM8 Tetraodon nigroviridis full-length cDNA Length = 1195 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 35 cccaggagaggagaggagagcagag 59 |||||||||||||||||||| |||| Sbjct: 65 cccaggagaggagaggagaggagag 41
>emb|CR729423.2|CNS0GPRP Tetraodon nigroviridis full-length cDNA Length = 1161 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 ggagaggagaggagagcagag 59 ||||||||||||||||||||| Sbjct: 32 ggagaggagaggagagcagag 12
>gb|AC116709.4| Mus musculus chromosome 1, clone RP23-91L14, complete sequence Length = 188848 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcaga 58 ||||||||||||||||||||| Sbjct: 168271 aggagaggagaggagagcaga 168251
>gb|BC024507.1| Mus musculus ubiquitin-like 3, mRNA (cDNA clone MGC:37460 IMAGE:4983604), complete cds Length = 2028 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcggcggc 152 |||| |||||||||||||||||||| Sbjct: 209 gctcggctcggctcggctcggcggc 233
>ref|XM_533369.2| PREDICTED: Canis familiaris similar to zinc binding alcohol dehydrogenase, domain containing 2 (LOC476162), mRNA Length = 1517 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 126 ccgctccgctcggctcggctcggcg 150 |||||| |||||||||||||||||| Sbjct: 96 ccgctcggctcggctcggctcggcg 72
>gb|AC165251.2| Mus musculus BAC clone RP24-75C16 from chromosome 13, complete sequence Length = 207075 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 caggagaggagaggagagcag 57 ||||||||||||||||||||| Sbjct: 124017 caggagaggagaggagagcag 123997
>emb|AL354795.17| Human DNA sequence from clone RP11-174B4 on chromosome 9q21.2-22.1 Contains the TRPM6 gene for transient receptor potential cation channel, subfamily M, member 6 (CHAK2, FLJ20087, FLJ22628) and 2 CpG islands, complete sequence Length = 195290 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 ggagaggagaggagagcagag 59 ||||||||||||||||||||| Sbjct: 37625 ggagaggagaggagagcagag 37645
>gb|AC164076.3| Mus musculus chromosome 1, clone RP24-287C18, complete sequence Length = 185185 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcaga 58 ||||||||||||||||||||| Sbjct: 52135 aggagaggagaggagagcaga 52115
>gb|AF192132.1| Fontinalis welchiana isolate FW257 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 910 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 gctcggctcggctcggcggcg 153 ||||||||||||||||||||| Sbjct: 159 gctcggctcggctcggcggcg 179
>gb|AF192131.1| Fontinalis novae-angliae internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 936 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 gctcggctcggctcggcggcg 153 ||||||||||||||||||||| Sbjct: 185 gctcggctcggctcggcggcg 205
>gb|AF192125.1| Fontinalis dalecarlica internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 922 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 gctcggctcggctcggcggcg 153 ||||||||||||||||||||| Sbjct: 177 gctcggctcggctcggcggcg 197
>gb|AF192104.1| Fontinalis flaccida internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 894 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 gctcggctcggctcggcggcg 153 ||||||||||||||||||||| Sbjct: 153 gctcggctcggctcggcggcg 173
>gb|AF192102.1| Fontinalis sullivantii isolate FS258 internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 936 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 gctcggctcggctcggcggcg 153 ||||||||||||||||||||| Sbjct: 185 gctcggctcggctcggcggcg 205
>gb|AC159194.3| Mus musculus BAC clone RP23-469D18 from chromosome 7, complete sequence Length = 213870 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcaga 58 ||||||||||||||||||||| Sbjct: 194807 aggagaggagaggagagcaga 194827
>emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0118P14, complete sequence Length = 158312 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 caccgaccgaccgaccggccg 96 ||||||||||||||||||||| Sbjct: 15458 caccgaccgaccgaccggccg 15478
>emb|AJ719815.1| Gallus gallus mRNA for hypothetical protein, clone 6m22 Length = 2005 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 gagaggagaggagagcagagc 60 ||||||||||||||||||||| Sbjct: 131 gagaggagaggagagcagagc 111
>ref|NM_001006460.1| Gallus gallus MAX dimerization protein 4 (MXD4), mRNA Length = 2005 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 gagaggagaggagagcagagc 60 ||||||||||||||||||||| Sbjct: 131 gagaggagaggagagcagagc 111
>gb|AC092765.2| Homo sapiens chromosome 1 clone RP11-400N13, complete sequence Length = 188261 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 ggagaggagaggagagcagag 59 ||||||||||||||||||||| Sbjct: 43047 ggagaggagaggagagcagag 43067
>gb|AC090648.5| Genomic sequence for Mus musculus, clone RP23-331I23, complete sequence Length = 198695 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcagagcgagatc 66 ||||||||||||||||| |||||| |||| Sbjct: 115704 aggagaggagaggagaggagagcgcgatc 115732
>dbj|AK154703.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630103P03 product:pleckstrin homology domain containing, family M (with RUN domain) member 1, full insert sequence Length = 5060 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 caggagaggagaggagagcagagcg 61 ||||||||||||| ||||||||||| Sbjct: 4380 caggagaggagagcagagcagagcg 4356
>gb|AC099310.1| Drosophila melanogaster, chromosome 3R, region 94D-94D, BAC clone BACR05G05, complete sequence Length = 163979 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 cgctccgctcggctcggctcg 147 ||||||||||||||||||||| Sbjct: 162750 cgctccgctcggctcggctcg 162770
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 cgccgtcgccgtcggcaccca 298 ||||||||||||||||||||| Sbjct: 2435486 cgccgtcgccgtcggcaccca 2435466 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tcgccgtcgccgtcggcacc 296 |||||||||||||||||||| Sbjct: 51283 tcgccgtcgccgtcggcacc 51264
>dbj|AK048562.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130075B12 product:unclassifiable, full insert sequence Length = 2597 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 caggagaggagaggagagcagagcg 61 ||||||||||||| ||||||||||| Sbjct: 1109 caggagaggagagcagagcagagcg 1085
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 caccgaccgaccgaccggccg 96 ||||||||||||||||||||| Sbjct: 19952795 caccgaccgaccgaccggccg 19952815
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 126 ccgctccgctcggctcggctcggcg 150 |||||| |||||||||||||||||| Sbjct: 7787422 ccgctcggctcggctcggctcggcg 7787446 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 ccgctccgctcggctcggctcggc 149 |||| ||||||||||||||||||| Sbjct: 7787417 ccgccccgctcggctcggctcggc 7787440 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 ccaggagaggagaggagagcagag 59 ||||||||||||||||||| |||| Sbjct: 7606584 ccaggagaggagaggagaggagag 7606561
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 ctccgctcggctcggctcggc 149 ||||||||||||||||||||| Sbjct: 3808328 ctccgctcggctcggctcggc 3808308
>gb|AC009846.9|AC009846 Drosophila melanogaster, chromosome 3R, region 94C-94D, BAC clone BACR23F10, complete sequence Length = 164038 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 cgctccgctcggctcggctcg 147 ||||||||||||||||||||| Sbjct: 122096 cgctccgctcggctcggctcg 122076
>gb|BC043729.1| Mus musculus, ubiquitin-like 3, clone IMAGE:4983604, mRNA Length = 2028 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcggcggc 152 |||| |||||||||||||||||||| Sbjct: 209 gctcggctcggctcggctcggcggc 233
>gb|AC174451.3| Mus musculus BAC clone RP23-182A1 from chromosome 3, complete sequence Length = 205136 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 ggagaggagaggagagcagag 59 ||||||||||||||||||||| Sbjct: 93063 ggagaggagaggagagcagag 93083
>gb|AF118260.1|MM2SOX1 Mus musculus sox2 gene, 5' flanking region and 5' UTR, partial sequence Length = 1922 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 127 cgctccgctcggctcggctcggcggcgcg 155 ||||| ||| ||||||||||||||||||| Sbjct: 1744 cgctctgctgggctcggctcggcggcgcg 1772
>emb|AL929449.14| Mouse DNA sequence from clone RP23-279D23 on chromosome 2, complete sequence Length = 146396 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 ggagaggagaggagagcagag 59 ||||||||||||||||||||| Sbjct: 36249 ggagaggagaggagagcagag 36269
>emb|AL929182.4| Zebrafish DNA sequence from clone CH211-195E3 in linkage group 20, complete sequence Length = 225515 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 gagaggagaggagagcagagc 60 ||||||||||||||||||||| Sbjct: 73295 gagaggagaggagagcagagc 73275
>gb|AE003740.3| Drosophila melanogaster chromosome 3R, section 78 of 118 of the complete sequence Length = 234378 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 cgctccgctcggctcggctcg 147 ||||||||||||||||||||| Sbjct: 108747 cgctccgctcggctcggctcg 108727
>gb|AC092094.19| Mus musculus strain C57BL/6J chromosome 3 clone rp23-261m19, complete sequence Length = 133659 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 gagaggagaggagagcagagc 60 ||||||||||||||||||||| Sbjct: 12889 gagaggagaggagagcagagc 12869
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 ctccgctcggctcggctcggc 149 ||||||||||||||||||||| Sbjct: 3817022 ctccgctcggctcggctcggc 3817002
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 126 ccgctccgctcggctcggctcggcg 150 |||||| |||||||||||||||||| Sbjct: 7787303 ccgctcggctcggctcggctcggcg 7787327 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 ccgctccgctcggctcggctcggc 149 |||| ||||||||||||||||||| Sbjct: 7787298 ccgccccgctcggctcggctcggc 7787321 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 ccaggagaggagaggagagcagag 59 ||||||||||||||||||| |||| Sbjct: 7606463 ccaggagaggagaggagaggagag 7606440
>emb|AL731786.3|CNS08C8A Oryza sativa chromosome 12, . BAC OSJNBa0010J13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146055 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 126 ccgctccgctcggctcggctcggcg 150 |||||| |||||||||||||||||| Sbjct: 86413 ccgctcggctcggctcggctcggcg 86437 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 ccgctccgctcggctcggctcggc 149 |||| ||||||||||||||||||| Sbjct: 86408 ccgccccgctcggctcggctcggc 86431
>gb|AC125099.3| Mus musculus BAC clone RP24-201C14 from 3, complete sequence Length = 166720 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 gagaggagaggagagcagagc 60 ||||||||||||||||||||| Sbjct: 113576 gagaggagaggagagcagagc 113556
>gb|AC140434.3| Mus musculus BAC clone RP24-105G15 from 3, complete sequence Length = 160839 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 ggagaggagaggagagcagag 59 ||||||||||||||||||||| Sbjct: 123039 ggagaggagaggagagcagag 123059
>emb|AL772325.4| Mouse DNA sequence from clone RP23-17O4 on chromosome 11, complete sequence Length = 42284 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 caggagaggagaggagagcagagcg 61 ||||||||||||| ||||||||||| Sbjct: 9847 caggagaggagagcagagcagagcg 9871
>emb|AL606746.17| Mouse DNA sequence from clone RP23-423J10 on chromosome 3, complete sequence Length = 203345 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 127 cgctccgctcggctcggctcggcggcgcg 155 ||||| ||| ||||||||||||||||||| Sbjct: 72400 cgctctgctgggctcggctcggcggcgcg 72428
>gb|AC162034.6| Mus musculus chromosome 7, clone RP23-285B12, complete sequence Length = 197907 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gagaggagaggagagcagag 59 |||||||||||||||||||| Sbjct: 78371 gagaggagaggagagcagag 78352
>gb|AC167012.3| Mus musculus BAC clone RP23-416A5 from chromosome 13, complete sequence Length = 193916 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 ccaggagaggagaggagagcagag 59 ||||||||||||||||||| |||| Sbjct: 26450 ccaggagaggagaggagaggagag 26427
>gb|AC164549.4| Mus musculus BAC clone RP24-273K1 from chromosome 16, complete sequence Length = 182658 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 ccaggagaggagaggagagcagag 59 ||||||||||||||||||| |||| Sbjct: 16119 ccaggagaggagaggagaggagag 16142
>gb|AC115006.12| Mus musculus chromosome 8, clone RP24-184D21, complete sequence Length = 163874 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 ccaggagaggagaggagagcagag 59 ||||||||||||||||||| |||| Sbjct: 120210 ccaggagaggagaggagaggagag 120187
>ref|XM_468438.1| Oryza sativa (japonica cultivar-group), mRNA Length = 990 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 ggagaggagaggagagcagagcga 62 |||||||||||||||| ||||||| Sbjct: 74 ggagaggagaggagaggagagcga 51
>ref|XM_468439.1| Oryza sativa (japonica cultivar-group), mRNA Length = 987 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 ggagaggagaggagagcagagcga 62 |||||||||||||||| ||||||| Sbjct: 28 ggagaggagaggagaggagagcga 5
>ref|XM_507057.2| PREDICTED Oryza sativa (japonica cultivar-group), P0474F11.16-1 mRNA Length = 1014 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 ggagaggagaggagagcagagcga 62 |||||||||||||||| ||||||| Sbjct: 43 ggagaggagaggagaggagagcga 20
>ref|XM_507551.1| PREDICTED Oryza sativa (japonica cultivar-group), P0474F11.16-1 mRNA Length = 1013 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 ggagaggagaggagagcagagcga 62 |||||||||||||||| ||||||| Sbjct: 43 ggagaggagaggagaggagagcga 20
>gb|DQ213970.1| Taeniopygia guttata clone 0063P0027G01 RIKEN cDNA 1700025G04 variant 2-like mRNA, complete sequence Length = 1155 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 ccgctccgctcggctcggctcggc 149 |||||| ||||||||||||||||| Sbjct: 8 ccgctcggctcggctcggctcggc 31
>ref|XM_464333.1| Oryza sativa (japonica cultivar-group), mRNA Length = 225 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 accgaccgaccgaccggccg 96 |||||||||||||||||||| Sbjct: 152 accgaccgaccgaccggccg 171
>ref|XM_450541.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1260 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 257 ccgcgcctcccaagccattgtcgccgtcgccg 288 ||||||| | ||| |||||||||||||||||| Sbjct: 1042 ccgcgcccctcaaaccattgtcgccgtcgccg 1011
>ref|NM_192403.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 576 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 387 aggagaggagaggagagcag 368
>ref|XM_463673.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 735 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 tgtcgccgtcgccgtcggca 294 |||||||||||||||||||| Sbjct: 430 tgtcgccgtcgccgtcggca 411
>ref|XM_470356.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3105 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tcgccgtcgccgtcggcacc 296 |||||||||||||||||||| Sbjct: 1990 tcgccgtcgccgtcggcacc 2009
>ref|XM_477003.1| Oryza sativa (japonica cultivar-group), mRNA Length = 417 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 caagccattgtcgccgtcgc 286 |||||||||||||||||||| Sbjct: 261 caagccattgtcgccgtcgc 242
>ref|NM_003656.3| Homo sapiens calcium/calmodulin-dependent protein kinase I (CAMK1), mRNA Length = 1501 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 gctcggctcggctcggcggc 152 |||||||||||||||||||| Sbjct: 27 gctcggctcggctcggcggc 8
>gb|BT018472.1| Zea mays clone EL01N0422G04.d mRNA sequence Length = 1502 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 gtcgccgtcgccgtcggcacccac 299 |||||||||||||||| ||||||| Sbjct: 1123 gtcgccgtcgccgtcgccacccac 1146
>gb|AC119820.20| Mus musculus chromosome 1, clone RP23-148M18, complete sequence Length = 183287 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 167232 aggagaggagaggagagcag 167213
>gb|AC115789.9| Mus musculus chromosome 18, clone RP23-398N2, complete sequence Length = 206108 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 37 caggagaggagaggagagcagagcgaga 64 |||||||||||||||||| |||| |||| Sbjct: 179548 caggagaggagaggagaggagagagaga 179521
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cattgtcgccgtcgccgtcg 291 |||||||||||||||||||| Sbjct: 71530 cattgtcgccgtcgccgtcg 71549
>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster, complete sequence Length = 99892 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 cgccgtcgccgtcggcaccc 297 |||||||||||||||||||| Sbjct: 31324 cgccgtcgccgtcggcaccc 31343
>gb|AC125262.9| Mus musculus chromosome 8, clone RP24-314K18, complete sequence Length = 185119 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 gctccgctcggctcggctcggcgg 151 |||| ||||||||||||||||||| Sbjct: 30339 gctcggctcggctcggctcggcgg 30316
>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC nbxb0045B21, complete sequence Length = 152397 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 139746 aggagaggagaggagagcag 139727
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 cggctcggctcggcggcgcg 155 |||||||||||||||||||| Sbjct: 3206082 cggctcggctcggcggcgcg 3206063
>gb|AC119214.6| Mus musculus chromosome 8, clone RP24-199K4, complete sequence Length = 156548 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gagaggagaggagagcagag 59 |||||||||||||||||||| Sbjct: 10397 gagaggagaggagagcagag 10378
>gb|AY611603.1| Cricetulus griseus mitochondrial folate transporter (MFT) mRNA, complete cds; nuclear gene for mitochondrial product Length = 2344 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcg 147 |||||||||||||||||||| Sbjct: 49 gctccgctcggctcggctcg 68
>ref|XM_362443.1| Magnaporthe grisea 70-15 predicted protein (MG08026.4) partial mRNA Length = 312 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cattgtcgccgtcgccgtcg 291 |||||||||||||||||||| Sbjct: 222 cattgtcgccgtcgccgtcg 241
>gb|AC137902.10| Mus musculus chromosome 15, clone RP23-372O9, complete sequence Length = 196712 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gagaggagaggagagcagag 59 |||||||||||||||||||| Sbjct: 14239 gagaggagaggagagcagag 14258
>gb|AC118259.10| Mus musculus chromosome 15, clone RP24-352J7, complete sequence Length = 146572 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gagaggagaggagagcagag 59 |||||||||||||||||||| Sbjct: 14882 gagaggagaggagagcagag 14863
>gb|AC079277.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-65N7, complete sequence Length = 190328 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 137060 aggagaggagaggagagcag 137079
>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092E21, complete sequence Length = 132649 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gctcggctcggctcggcggc 152 |||||||||||||||||||| Sbjct: 79116 gctcggctcggctcggcggc 79135
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 cggctcggctcggcggcgcg 155 |||||||||||||||||||| Sbjct: 775068 cggctcggctcggcggcgcg 775087
>gb|AC161197.9| Mus musculus chromosome 7, clone RP23-179K11, complete sequence Length = 240657 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gagaggagaggagagcagag 59 |||||||||||||||||||| Sbjct: 33974 gagaggagaggagagcagag 33993
>ref|NM_009454.2| Mus musculus ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast) (Ube2e3), mRNA Length = 1562 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 ccgctccgctcggctcggctcggc 149 ||||| |||||||||||||||||| Sbjct: 54 ccgctgcgctcggctcggctcggc 31
>gb|AE009059.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 85 of 256 of the complete sequence Length = 11712 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 gccgtcgccgtcggcaccca 298 |||||||||||||||||||| Sbjct: 7307 gccgtcgccgtcggcaccca 7288
>gb|AC144809.2| Mus musculus BAC clone RP24-391L5 from chromosome 9, complete sequence Length = 185599 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 ccaggagaggagaggagagcagag 59 ||||||||||||||||||| |||| Sbjct: 97229 ccaggagaggagaggagaggagag 97206
>ref|NM_011908.1| Mus musculus ubiquitin-like 3 (Ubl3), mRNA Length = 2594 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gctcggctcggctcggcggc 152 |||||||||||||||||||| Sbjct: 200 gctcggctcggctcggcggc 219
>gb|AC158302.3| Mus musculus chromosome 5, clone RP24-61O18, complete sequence Length = 215326 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 gctcggctcggctcggcggc 152 |||||||||||||||||||| Sbjct: 45930 gctcggctcggctcggcggc 45911
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cattgtcgccgtcgccgtcg 291 |||||||||||||||||||| Sbjct: 14111 cattgtcgccgtcgccgtcg 14130
>gb|AC109139.15| Mus musculus chromosome 8, clone RP23-47L13, complete sequence Length = 268904 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 129359 aggagaggagaggagagcag 129378
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tcgccgtcgccgtcggcacc 296 |||||||||||||||||||| Sbjct: 34916728 tcgccgtcgccgtcggcacc 34916709
>gb|AC125357.4| Mus musculus BAC clone RP23-235J18 from chromosome 9, complete sequence Length = 217511 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagcgagat 65 ||||||||||||||||| |||| ||||| Sbjct: 140469 aggagaggagaggagaggagagggagat 140442
>ref|XM_847477.1| PREDICTED: Canis familiaris similar to small inducible cytokine B14 precursor (LOC610078), mRNA Length = 1414 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 ccgctccgctcggctcggctcggc 149 |||||| ||||||||||||||||| Sbjct: 816 ccgctcggctcggctcggctcggc 793
>gb|AC132470.3| Mus musculus BAC clone RP23-96F5 from chromosome 14, complete sequence Length = 206002 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 gagaggagagcagagcgaga 64 |||||||||||||||||||| Sbjct: 182704 gagaggagagcagagcgaga 182723
>gb|AC125807.9| Homo sapiens 12 BAC RP11-253E3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131995 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gagaggagaggagagcagag 59 |||||||||||||||||||| Sbjct: 110340 gagaggagaggagagcagag 110321
>gb|AC123935.4| Mus musculus BAC clone RP23-354J3 from chromosome 13, complete sequence Length = 219370 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gagaggagaggagagcagag 59 |||||||||||||||||||| Sbjct: 167126 gagaggagaggagagcagag 167107
>emb|CR956381.6| Pig DNA sequence from clone CH242-248C21 on chromosome 17, complete sequence Length = 58781 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 ccccaggagaggagaggagagcag 57 ||||||||| |||||||||||||| Sbjct: 24752 ccccaggagtggagaggagagcag 24729
>gb|AC122320.4| Mus musculus BAC clone RP23-315F17 from 14, complete sequence Length = 197655 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gagaggagagcagagcgaga 64 |||||||||||||||||||| Sbjct: 169922 gagaggagagcagagcgaga 169903
>gb|AC126457.3| Mus musculus BAC clone RP23-68E6 from 16, complete sequence Length = 147585 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 ccaggagaggagaggagagcagag 59 ||||||||||||||||||| |||| Sbjct: 88630 ccaggagaggagaggagaggagag 88653
>gb|AC121597.2| Mus musculus BAC clone RP23-300D5 from 9, complete sequence Length = 168730 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 ccaggagaggagaggagagcagag 59 ||||||||||||||||||| |||| Sbjct: 21809 ccaggagaggagaggagaggagag 21786
>gb|AC006319.3| Homo sapiens PAC clone RP5-837C9 from 7, complete sequence Length = 85821 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 caggagaggagaggagagcagagc 60 |||||||||||||||||| ||||| Sbjct: 81871 caggagaggagaggagaggagagc 81894
>gb|AC116489.6| Mus musculus chromosome 18, clone RP24-137L16, complete sequence Length = 198242 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 37 caggagaggagaggagagcagagcgaga 64 |||||||||||||||||| |||| |||| Sbjct: 185637 caggagaggagaggagaggagagagaga 185664
>gb|AC104906.6| Mus musculus chromosome 10, clone RP24-374K6, complete sequence Length = 179312 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ggagaggagaggagagcaga 58 |||||||||||||||||||| Sbjct: 26480 ggagaggagaggagagcaga 26461
>gb|AC145816.1| Pan troglodytes BAC clone RP43-6A13 from 7, complete sequence Length = 200683 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 caggagaggagaggagagcagagc 60 |||||||||||||||||| ||||| Sbjct: 38891 caggagaggagaggagaggagagc 38914
>emb|AL513190.13| Human DNA sequence from clone RP11-12J10 on chromosome 10 Contains the 3' end of the LHPP gene for phospholysine phosphohistidine inorganic pyrophosphate phosphatase, the 3' end of gene KIAA0140 (FLJ13019) and a CpG island, complete sequence Length = 120770 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ccccaggagaggagaggaga 53 |||||||||||||||||||| Sbjct: 40815 ccccaggagaggagaggaga 40834
>gb|AC091542.3| Felis catus clone RP86-141L11, complete sequence Length = 142451 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 ccgctccgctcggctcggctcggc 149 |||||| ||||||||||||||||| Sbjct: 39317 ccgctcggctcggctcggctcggc 39294
>gb|AF533880.1| Homo sapiens putative serine/threonine protein kinase variant B3 mRNA, complete cds Length = 3212 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcggcggcgcg 155 |||| ||||||||||||||||| ||||| Sbjct: 25 gctcggctcggctcggctcggctgcgcg 52
>gb|AF533879.1| Homo sapiens putative serine/threonine protein kinase variant C mRNA, complete cds Length = 3586 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcggcggcgcg 155 |||| ||||||||||||||||| ||||| Sbjct: 25 gctcggctcggctcggctcggctgcgcg 52
>gb|AF533878.1| Homo sapiens putative serine/threonine protein kinase variant B2 mRNA, complete cds Length = 4888 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcggcggcgcg 155 |||| ||||||||||||||||| ||||| Sbjct: 25 gctcggctcggctcggctcggctgcgcg 52
>gb|AF533877.1| Homo sapiens putative serine/threonine protein kinase variant B1 mRNA, complete cds Length = 3164 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcggcggcgcg 155 |||| ||||||||||||||||| ||||| Sbjct: 25 gctcggctcggctcggctcggctgcgcg 52
>gb|AF533876.1| Homo sapiens putative serine/threonine protein kinase variant A mRNA, complete cds Length = 3117 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcggcggcgcg 155 |||| ||||||||||||||||| ||||| Sbjct: 25 gctcggctcggctcggctcggctgcgcg 52
>emb|AL162291.14| Human DNA sequence from clone RP11-402F1 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 98399 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gagaggagaggagagcagag 59 |||||||||||||||||||| Sbjct: 58096 gagaggagaggagagcagag 58077 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gagaggagaggagagcagag 59 |||||||||||||||||||| Sbjct: 58061 gagaggagaggagagcagag 58042
>emb|AL079339.11|HSJ906P16 Human DNA sequence from clone RP5-906P16 on chromosome 20q13.12-13.2 Contains ESTs, STSs and GSSs, complete sequence Length = 86719 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 ccaggagaggagaggagagcagag 59 ||||||||||||||||||| |||| Sbjct: 23987 ccaggagaggagaggagaggagag 24010
>gb|AC163388.5| Mus musculus chromosome 1, clone RP24-74P5, complete sequence Length = 208139 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 agaggagaggagagcagagc 60 |||||||||||||||||||| Sbjct: 81020 agaggagaggagagcagagc 81039 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 agaggagaggagagcagagc 60 |||||||||||||||||||| Sbjct: 80910 agaggagaggagagcagagc 80929 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 agaggagaggagagcagagc 60 |||||||||||||||||||| Sbjct: 80865 agaggagaggagagcagagc 80884
>gb|AC129888.3| Atelerix albiventris clone LB4-495B20, complete sequence Length = 149724 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 cccaggagaggagaggagag 54 |||||||||||||||||||| Sbjct: 87615 cccaggagaggagaggagag 87634
>emb|AL669868.16| Mouse DNA sequence from clone RP23-304H7 on chromosome 11 Contains a COMM domain containing 9 (Commd9) pseudogene, a novel gene and the Tcf2 gene for transcription factor 2, complete sequence Length = 131266 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagcg 61 ||||||||||||||||| |||||| Sbjct: 42624 aggagaggagaggagaggagagcg 42601
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 cggctcggctcggcggcgcg 155 |||||||||||||||||||| Sbjct: 583714 cggctcggctcggcggcgcg 583733
>emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5 Length = 167014 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 accaccgaccgaccgaccggccgc 97 ||||||||||||||||||| |||| Sbjct: 49060 accaccgaccgaccgaccgaccgc 49083
>gb|AC136297.6| Homo sapiens chromosome 11, clone CTD-2245O6, complete sequence Length = 185908 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 128 gctccgctcggctcggctcggcggcgcg 155 |||| ||||||||||||||||| ||||| Sbjct: 61718 gctcggctcggctcggctcggctgcgcg 61691
>emb|AL596256.14| Mouse DNA sequence from clone RP23-259D24 on chromosome 11, complete sequence Length = 169405 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagcg 61 ||||||||||||||||| |||||| Sbjct: 70120 aggagaggagaggagaggagagcg 70097
>emb|AJ721027.1| Gallus gallus mRNA for hypothetical protein, clone 32l12 Length = 1676 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcggcgg 151 |||| ||||||||||||||||||| Sbjct: 45 gctcggctcggctcggctcggcgg 68
>gb|AC154393.8| Mus musculus chromosome 1, clone RP23-64O1, complete sequence Length = 253733 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 236262 aggagaggagaggagagcag 236281
>gb|AY965680.1| Eptatretus stoutii nonfunctional variable lymphocyte receptor A (VLRA) gene, complete sequence Length = 81648 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 ccaggagaggagaggagagcagag 59 ||||||||||||||||||| |||| Sbjct: 37411 ccaggagaggagaggagagtagag 37388
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 gccgtcgccgtcggcaccca 298 |||||||||||||||||||| Sbjct: 935879 gccgtcgccgtcggcaccca 935860
>gb|AC158352.5| Mus musculus chromosome 8, clone RP24-325B16, complete sequence Length = 166845 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gagaggagaggagagcagag 59 |||||||||||||||||||| Sbjct: 102779 gagaggagaggagagcagag 102760
>dbj|AK160233.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810004I01 product:ubiquitin-like 3, full insert sequence Length = 1173 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gctcggctcggctcggcggc 152 |||||||||||||||||||| Sbjct: 103 gctcggctcggctcggcggc 122
>dbj|AK156454.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830022H24 product:ubiquitin-like 3, full insert sequence Length = 6111 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gctcggctcggctcggcggc 152 |||||||||||||||||||| Sbjct: 169 gctcggctcggctcggcggc 188
>ref|NM_003957.1| Homo sapiens BR serine/threonine kinase 2 (BRSK2), mRNA Length = 3516 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcggcggcgcg 155 |||| ||||||||||||||||| ||||| Sbjct: 27 gctcggctcggctcggctcggctgcgcg 54
>gb|AC154779.3| Mus musculus BAC clone RP24-461H19 from chromosome 17, complete sequence Length = 188929 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagcgagat 65 ||||||||||||||||| |||| ||||| Sbjct: 150889 aggagaggagaggagaggagagagagat 150862
>gb|AC102621.12| Mus musculus chromosome 1, clone RP23-429G8, complete sequence Length = 175286 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 agaggagaggagagcagagc 60 |||||||||||||||||||| Sbjct: 131307 agaggagaggagagcagagc 131326 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 agaggagaggagagcagagc 60 |||||||||||||||||||| Sbjct: 131197 agaggagaggagagcagagc 131216 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 agaggagaggagagcagagc 60 |||||||||||||||||||| Sbjct: 131152 agaggagaggagagcagagc 131171
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 cccaggagaggagaggagag 54 |||||||||||||||||||| Sbjct: 1658815 cccaggagaggagaggagag 1658834
>gb|AC002308.1| Homo sapiens Chromosome 22q11.2 BAC Clone 1000e4 In IGLC Region, complete sequence Length = 151111 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gagaggagaggagagcagag 59 |||||||||||||||||||| Sbjct: 149836 gagaggagaggagagcagag 149817
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 cattgtcgccgtcgccgtcg 291 |||||||||||||||||||| Sbjct: 1298290 cattgtcgccgtcgccgtcg 1298271
>gb|AC159468.4| Mus musculus 10 BAC RP23-335A3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214532 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ggagaggagaggagagcaga 58 |||||||||||||||||||| Sbjct: 182293 ggagaggagaggagagcaga 182274
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 13971120 aggagaggagaggagagcag 13971101
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 26734757 aggagaggagaggagagcag 26734738 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 23279463 aggagaggagaggagagcag 23279482 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 6896212 aggagaggagaggagagcag 6896193 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 caagccattgtcgccgtcgc 286 |||||||||||||||||||| Sbjct: 5306422 caagccattgtcgccgtcgc 5306441
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 16533665 aggagaggagaggagagcag 16533646
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cattgtcgccgtcgccgtcg 291 |||||||||||||||||||| Sbjct: 20758306 cattgtcgccgtcgccgtcg 20758325 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gctcggctcggctcggcggc 152 |||||||||||||||||||| Sbjct: 20535637 gctcggctcggctcggcggc 20535656
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tcgccgtcgccgtcggcacc 296 |||||||||||||||||||| Sbjct: 35006800 tcgccgtcgccgtcggcacc 35006781
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 ggagaggagaggagagcagagcga 62 |||||||||||||||| ||||||| Sbjct: 35252691 ggagaggagaggagaggagagcga 35252668 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 32702007 aggagaggagaggagagcag 32701988 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 32176256 aggagaggagaggagagcag 32176237 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 17438245 aggagaggagaggagagcag 17438226 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 257 ccgcgcctcccaagccattgtcgccgtcgccg 288 ||||||| | ||| |||||||||||||||||| Sbjct: 12753350 ccgcgcccctcaaaccattgtcgccgtcgccg 12753319 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 accgaccgaccgaccggccg 96 |||||||||||||||||||| Sbjct: 4546792 accgaccgaccgaccggccg 4546811
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 tgtcgccgtcgccgtcggca 294 |||||||||||||||||||| Sbjct: 40577084 tgtcgccgtcgccgtcggca 40577065 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 26412286 aggagaggagaggagagcag 26412267 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 23619195 aggagaggagaggagagcag 23619176 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagcgagat 65 ||||||||||||||||| |||| ||||| Sbjct: 4216376 aggagaggagaggagaggagagagagat 4216349
>gb|AC018809.5| Homo sapiens chromosome 3 clone RP11-1020A11 map 3p, complete sequence Length = 216911 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 gctcggctcggctcggcggc 152 |||||||||||||||||||| Sbjct: 209138 gctcggctcggctcggcggc 209119
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 tgtcgccgtcgccgtcggca 294 |||||||||||||||||||| Sbjct: 19062 tgtcgccgtcgccgtcggca 19043
>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1033B05 Length = 138882 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 tgtcgccgtcgccgtcggca 294 |||||||||||||||||||| Sbjct: 138708 tgtcgccgtcgccgtcggca 138689
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tcgccgtcgccgtcggcacc 296 |||||||||||||||||||| Sbjct: 98752 tcgccgtcgccgtcggcacc 98771
>ref|XM_215754.3| PREDICTED: Rattus norvegicus ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast) (predicted) (Ube2e3_predicted), mRNA Length = 1526 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 ccgctccgctcggctcggctcggc 149 |||| ||||||||||||||||||| Sbjct: 49 ccgccccgctcggctcggctcggc 26
>gb|AC068056.7| Homo sapiens BAC clone RP11-84M3 from 2, complete sequence Length = 193017 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 agaggagaggagagcagagc 60 |||||||||||||||||||| Sbjct: 35871 agaggagaggagagcagagc 35852
>gb|AY166857.1| Homo sapiens serine/threonine protein kinase isoform mRNA, complete cds Length = 3516 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcggcggcgcg 155 |||| ||||||||||||||||| ||||| Sbjct: 27 gctcggctcggctcggctcggctgcgcg 54
>ref|NM_001006273.1| Gallus gallus similar to RIKEN cDNA 6330409N04 (LOC418871), mRNA Length = 1676 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gctccgctcggctcggctcggcgg 151 |||| ||||||||||||||||||| Sbjct: 45 gctcggctcggctcggctcggcgg 68
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 34721 aggagaggagaggagagcag 34740
>dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0539D10 Length = 158691 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 20269 aggagaggagaggagagcag 20250
>dbj|AP004728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0583E12 Length = 152449 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 29645 aggagaggagaggagagcag 29626
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 ggagaggagaggagagcagagcga 62 |||||||||||||||| ||||||| Sbjct: 3025 ggagaggagaggagaggagagcga 3002
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 86151 aggagaggagaggagagcag 86132
>dbj|AP003709.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0006H05 Length = 154821 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 20905 aggagaggagaggagagcag 20886
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcagagcgagat 65 ||||||||||||||||| |||| ||||| Sbjct: 54343 aggagaggagaggagaggagagagagat 54316
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 81894 aggagaggagaggagagcag 81875
>dbj|AP004572.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0668C05 Length = 142081 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 20027 aggagaggagaggagagcag 20008
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 81614 aggagaggagaggagagcag 81595
>dbj|AP005257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0417F02 Length = 150660 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 caagccattgtcgccgtcgc 286 |||||||||||||||||||| Sbjct: 40786 caagccattgtcgccgtcgc 40805
>dbj|AP004379.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0589E08 Length = 138416 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 caagccattgtcgccgtcgc 286 |||||||||||||||||||| Sbjct: 105185 caagccattgtcgccgtcgc 105204
>dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0086N11 Length = 146185 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 257 ccgcgcctcccaagccattgtcgccgtcgccg 288 ||||||| | ||| |||||||||||||||||| Sbjct: 101627 ccgcgcccctcaaaccattgtcgccgtcgccg 101596
>gb|AC157097.5| Mus musculus 6 BAC RP24-369M3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 206335 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aggagaggagaggagagcag 57 |||||||||||||||||||| Sbjct: 130730 aggagaggagaggagagcag 130711
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1297_C09 Length = 163378 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 accgaccgaccgaccggccg 96 |||||||||||||||||||| Sbjct: 82171 accgaccgaccgaccggccg 82190
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 257 ccgcgcctcccaagccattgtcgccgtcgccg 288 ||||||| | ||| |||||||||||||||||| Sbjct: 7182 ccgcgcccctcaaaccattgtcgccgtcgccg 7151 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,762,544 Number of Sequences: 3902068 Number of extensions: 2762544 Number of successful extensions: 181614 Number of sequences better than 10.0: 293 Number of HSP's better than 10.0 without gapping: 302 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 175267 Number of HSP's gapped (non-prelim): 6157 length of query: 429 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 407 effective length of database: 17,147,199,772 effective search space: 6978910307204 effective search space used: 6978910307204 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
