Clone Name	bastl46c09
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	emb|AM087608.1| Hordeum vulgare tpase gene for transposase-relat...	708	0.0
2	emb|AM087610.1| Triticum aestivum tpase gene for transposase-rel...	466	e-128
3	emb|AM087609.1| Triticum aestivum tpase gene for transposase rel...	458	e-126
4	ref|XM_473986.1| Oryza sativa (japonica cultivar-group), predic...	170	3e-39
5	dbj|AK099285.1| Oryza sativa (japonica cultivar-group) cDNA clon...	170	3e-39
6	dbj|AK072594.1| Oryza sativa (japonica cultivar-group) cDNA clon...	170	3e-39
7	dbj|AK066078.1| Oryza sativa (japonica cultivar-group) cDNA clon...	170	3e-39
8	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	165	2e-37
9	emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4,...	165	2e-37
10	dbj|AK066646.1| Oryza sativa (japonica cultivar-group) cDNA clon...	163	6e-37
11	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	48	0.026
12	dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic D...	48	0.026
13	gb|BT016283.1| Zea mays clone Contig116 mRNA sequence	46	0.10
14	gb|AC147667.3| Pan troglodytes BAC clone CH251-114F17 from Y, co...	46	0.10
15	dbj|BS000597.1| Pan troglodytes chromosome Y clone:PTB-206N19, c...	46	0.10
16	gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence	46	0.10
17	gb|AC164571.3| Pan troglodytes BAC clone CH251-967O8 from chromo...	46	0.10
18	gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequ...	46	0.10
19	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	46	0.10
20	gb|AC148940.5| Pan troglodytes BAC clone CH251-96J19 from chromo...	46	0.10
21	dbj|AB120430.1| Oryza sativa (japonica cultivar-group) chloropla...	46	0.10
22	dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic D...	46	0.10
23	dbj|AB096015.1| Oryza sativa (japonica cultivar-group) rpoT2 mRN...	46	0.10
24	ref|XM_706213.1| Candida albicans SC5314 hypothetical protein (C...	44	0.40
25	gb|AC147660.2| Pan troglodytes BAC clone CH251-389M10 from Y, co...	44	0.40
26	emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ...	44	0.40
27	gb|AC150279.2| Pan troglodytes BAC clone CH251-100M4 from chromo...	44	0.40
28	gb|AC150878.5| Pan troglodytes BAC clone CH251-589A4 from chromo...	44	0.40
29	ref|NM_120858.2| Arabidopsis thaliana actin binding AT5G07760 mR...	42	1.6
30	gb|U68053.1|PLU68053 Planococcus lilacinus clone NRC50 nuclease ...	42	1.6
31	gb|AC069288.7| Homo sapiens BAC clone RP11-416J17 from 7, comple...	42	1.6
32	ref|XM_850365.1| PREDICTED: Canis familiaris similar to MAX dime...	42	1.6
33	gb|AC122836.4| Mus musculus BAC clone RP23-188B13 from 7, comple...	42	1.6
34	emb|X95262.1|LETFM5GEN L.esculentum Tfm5 gene	42	1.6
35	gb|AC102076.9| Mus musculus chromosome 7, clone RP23-401P12, com...	42	1.6
36	ref|XM_394607.2| PREDICTED: Apis mellifera similar to CG6634-PA ...	42	1.6
37	gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome	42	1.6
38	dbj|AB010070.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	42	1.6
39	ref|NM_121823.1| Arabidopsis thaliana RNA binding / rRNA binding...	40	6.3
40	ref|XM_450934.1| Oryza sativa (japonica cultivar-group), mRNA	40	6.3
41	gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chr...	40	6.3
42	gb|AC135920.2| Oryza sativa (japonica cultivar-group) chromosome...	40	6.3
43	gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome...	40	6.3
44	gb|AC135240.2| Mus musculus BAC clone RP24-63O24 from chromosome...	40	6.3
45	gb|AC140420.4| Mus musculus BAC clone RP24-440F22 from chromosom...	40	6.3
46	ref|NM_021168.2| Homo sapiens RAB40C, member RAS oncogene family...	40	6.3
47	gb|AC118610.9| Mus musculus chromosome 6, clone RP23-178I17, com...	40	6.3
48	ref|XM_568696.1| Cryptococcus neoformans var. neoformans JEC21 h...	40	6.3
49	gb|AC121801.2| Mus musculus BAC clone RP23-432P18 from 14, compl...	40	6.3
50	ref|XM_860540.1| PREDICTED: Canis familiaris similar to MAX dime...	40	6.3
51	ref|XM_546209.2| PREDICTED: Canis familiaris similar to MAX dime...	40	6.3
52	emb|Z84479.1|HS398G5 Human DNA sequence from clone LA16c-398G5 o...	40	6.3
53	emb|AL591806.16| Human DNA sequence from clone RP11-544M22 on ch...	40	6.3
54	emb|AL391628.18| Human DNA sequence from clone RP11-375H24 on ch...	40	6.3
55	emb|AL121827.34|HSA261N11 Human DNA sequence from clone RP11-261...	40	6.3
56	emb|X72957.1|XLNUCLEO X.laevis mRNA for nucleolin	40	6.3
57	gb|BC028696.1| Homo sapiens RAB40C, member RAS oncogene family, ...	40	6.3
58	gb|AE006464.1| Homo sapiens 16p13.3 sequence section 3 of 8	40	6.3
59	gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome	40	6.3
60	gb|DQ093071.1| Homo sapiens cholinergic receptor, nicotinic, alp...	40	6.3
61	dbj|AB197011.1| Haliotis discus hannai DNA, microsatellite Hdh61	40	6.3
62	gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, comp...	40	6.3
63	gb|AC153932.10| Mus musculus 10 BAC RP24-266J23 (Roswell Park Ca...	40	6.3
64	gb|U86935.1|MCU86935 Molluscum contagiosum virus subtype 1 clone...	40	6.3
65	gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, r...	40	6.3
66	ref|XM_393930.2| PREDICTED: Apis mellifera similar to CG31632-PA...	40	6.3
67	gb|AC007814.6|AC007814 Drosophila melanogaster, chromosome 3R, r...	40	6.3
68	ref|XM_392261.2| PREDICTED: Apis mellifera similar to ENSANGP000...	40	6.3
69	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	40	6.3
70	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	40	6.3
71	gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, r...	40	6.3
72	gb|AC010917.16|AC010917 Drosophila melanogaster, chromosome X, r...	40	6.3
73	gb|AC011706.14|AC011706 Drosophila melanogaster, chromosome X, r...	40	6.3
74	gb|AC007813.4|AC007813 Drosophila melanogaster, chromosome 3R, r...	40	6.3
75	gb|AC159333.7| Mus musculus 10 BAC RP23-409C14 (Roswell Park Can...	40	6.3
76	gb|AY190945.1| Drosophila pseudoobscura clone DPSF01_10_G08 (D14...	40	6.3
77	dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic D...	40	6.3
78	dbj|AB012246.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	40	6.3
79	dbj|AK000584.1| Homo sapiens cDNA FLJ20577 fis, clone REC00709	40	6.3
80	gb|AE003723.5| Drosophila melanogaster chromosome 3R, section 61...	40	6.3
81	gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 ...	40	6.3
82	gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 ...	40	6.3
83	gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge...	40	6.3
84	gb|AC145958.3| Gallus gallus BAC clone CH261-16J12 from chromoso...	40	6.3
85	gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis thali...	40	6.3
86	emb|AL611950.17| Mouse DNA sequence from clone RP23-45A18 on chr...	40	6.3

---

>emb|AM087608.1| Hordeum vulgare tpase gene for transposase-related protein b-gary,
            exons 1-4
          Length = 8190

 Score =  708 bits (357), Expect = 0.0
 Identities = 357/357 (100%)
 Strand = Plus / Plus

                                                                        
Query: 68   cagccatggagatagagcatgctgtgatcccgcaggtcgtggagtataccgaggagcatg 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1473 cagccatggagatagagcatgctgtgatcccgcaggtcgtggagtataccgaggagcatg 1532

                                                                        
Query: 128  aggtggaggtggacgtggacgtggacaacatcatgaagacggaggtgtcgtacggttccg 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1533 aggtggaggtggacgtggacgtggacaacatcatgaagacggaggtgtcgtacggttccg 1592

                                                                        
Query: 188  ggattcacaacagcgccttcaggtacaagcacaagaagaggtccaaggtctgggaggagt 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1593 ggattcacaacagcgccttcaggtacaagcacaagaagaggtccaaggtctgggaggagt 1652

                                                                        
Query: 248  acaagcccatcttcctcgacggcaaggtccagttcgctgagtgcctctattgccacaacc 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1653 acaagcccatcttcctcgacggcaaggtccagttcgctgagtgcctctattgccacaacc 1712

                                                                        
Query: 308  ggctcagctgcaaggactccaacggcaccagccacctgtggcgccaccagaagatctgcc 367
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1713 ggctcagctgcaaggactccaacggcaccagccacctgtggcgccaccagaagatctgcc 1772

                                                                     
Query: 368  cgggcaagacggaggtcgcggcggagaggcaacagaaggattcctacttcccatatg 424
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1773 cgggcaagacggaggtcgcggcggagaggcaacagaaggattcctacttcccatatg 1829



 Score =  139 bits (70), Expect = 9e-30
 Identities = 70/70 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgccctaatcgtgcccggaatctcccctccccggccctcgcaaggctcccccggcgatc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 atgccctaatcgtgcccggaatctcccctccccggccctcgcaaggctcccccggcgatc 1173

                      
Query: 61   tccatctcag 70
            ||||||||||
Sbjct: 1174 tccatctcag 1183



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 43/43 (100%)
 Strand = Plus / Plus

                                                       
Query: 424  gttttgctgaatggagatagtccagtttcaccaattgacccgg 466
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1988 gttttgctgaatggagatagtccagtttcaccaattgacccgg 2030

---

>emb|AM087610.1| Triticum aestivum tpase gene for transposase-related protein
           w-gary2, exons 1-2
          Length = 3544

 Score =  466 bits (235), Expect = e-128
 Identities = 327/357 (91%), Gaps = 3/357 (0%)
 Strand = Plus / Plus

                                                                       
Query: 71  ccatggagatagagcatgctgtgatcccgca---ggtcgtggagtataccgaggagcatg 127
           |||||||||| ||||||||||||||||  ||   ||||||||| ||| ||||||| | ||
Sbjct: 427 ccatggagatggagcatgctgtgatccaccatcaggtcgtggattatcccgaggatcttg 486

                                                                       
Query: 128 aggtggaggtggacgtggacgtggacaacatcatgaagacggaggtgtcgtacggttccg 187
           ||||||||||||| |||||| || ||||||||||||||||||||||| |||||||||| |
Sbjct: 487 aggtggaggtggaggtggacctgtacaacatcatgaagacggaggtggcgtacggttcgg 546

                                                                       
Query: 188 ggattcacaacagcgccttcaggtacaagcacaagaagaggtccaaggtctgggaggagt 247
           || |||||| ||  || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gggttcacagcactgcgttcaggtacaagcacaagaagaggtccaaggtctgggaggagt 606

                                                                       
Query: 248 acaagcccatcttcctcgacggcaaggtccagttcgctgagtgcctctattgccacaacc 307
           ||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 607 acaagcccatcttcctcaacggcaaggtccagttcgccgagtgcctctactgccacaacc 666

                                                                       
Query: 308 ggctcagctgcaaggactccaacggcaccagccacctgtggcgccaccagaagatctgcc 367
           |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 667 ggctcagctgcaaggactccaacggcacgagccacctgtggcggcaccagaagatctgcc 726

                                                                    
Query: 368 cgggcaagacggaggtcgcggcggagaggcaacagaaggattcctacttcccatatg 424
           ||| |||| ||||||  ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 727 cggccaagtcggaggcagcggcggaggggcaacagaaggattcctacttcccatatg 783



 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgccctaatcgtgcccggaatctcccctccccggccctcgcaaggctcccccggcgatc 60
           ||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||
Sbjct: 63  atgccctaatcgtgcccggaattgcccctccccggcccccgcaaggctcccccggcgatc 122

              
Query: 61  tcc 63
           |||
Sbjct: 123 tcc 125



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 424 gttttgctgaatggagatagtccagtttcaccaattgacccgg 466
           |||||| ||||||||||  ||||| | ||||||||||||||||
Sbjct: 943 gttttggtgaatggagacggtccattgtcaccaattgacccgg 985

---

>emb|AM087609.1| Triticum aestivum tpase gene for transposase related protein
           w-gary1, exons 1-4
          Length = 3632

 Score =  458 bits (231), Expect = e-126
 Identities = 327/358 (91%), Gaps = 12/358 (3%)
 Strand = Plus / Plus

                                                                       
Query: 68  cagccatggagatagagcatgctgtgatcccgcag---gtcgtggagtataccgaggagc 124
           ||||||||||||| |||||||||||||||| ||||   |||||||||||| |||||||||
Sbjct: 489 cagccatggagatggagcatgctgtgatccagcagcaggtcgtggagtatcccgaggagc 548

                                                                       
Query: 125 atgaggtggaggtggacgtggacgtggacaacatcatgaagacggaggtgtcgtacggtt 184
           ||||||||||      |||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 549 atgaggtgga------cgtggacgtggacaacatcatgaagacggaggtggcgtacggct 602

                                                                       
Query: 185 ccgggattcacaacagcgccttcaggtacaagcacaagaagaggtccaaggtctgggagg 244
           ||||| |||||| || ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ccggggttcacagcaccgcgttcaggtacaagcacaagaagaggtccaaggtctgggagg 662

                                                                       
Query: 245 agtacaagcccatcttcctcgacggcaaggtccagttcgctgagtgcctctattgccaca 304
           |||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||
Sbjct: 663 agtacaagcccatcttcctcaacggcaaggtccagttcgccgagtgcctctactgccaca 722

                                                                       
Query: 305 accggctcagctgcaaggactccaacggcaccagccacctgtggcgccaccagaagatct 364
           ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 723 accggctcagctgcaaggactccaacggcacgagccacctgtggcggcaccagaagatct 782

                                                                     
Query: 365 gcccgggcaagacgga---ggtcgcggcggagaggcaacagaaggattcctacttccc 419
           |||||| |||| ||||   ||  ||||||||| |||||||||||||||||||||||||
Sbjct: 783 gcccggccaagtcggaggcggcagcggcggaggggcaacagaaggattcctacttccc 840



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 66/72 (91%), Gaps = 3/72 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgccctaatcgtgcccggaatctcccctccccggccctc--gcaaggctcccccggcga 58
           |||||||||||| ||||||||| ||||||||||||||| |  |||||||| |||||||||
Sbjct: 119 atgccctaatcgcgcccggaat-tcccctccccggcccccccgcaaggcttccccggcga 177

                       
Query: 59  tctccatctcag 70
           ||||||||||||
Sbjct: 178 tctccatctcag 189



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                       
Query: 424  gttttgctgaatggagatagtccagtttcaccaattgacccgg 466
            |||||| |||||||||| |||||||| || |||||||||||||
Sbjct: 1006 gttttggtgaatggagacagtccagtgtcgccaattgacccgg 1048

---

>ref|XM_473986.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2409

 Score =  170 bits (86), Expect = 3e-39
 Identities = 193/228 (84%), Gaps = 3/228 (1%)
 Strand = Plus / Plus

                                                                       
Query: 209 ggtacaagcacaagaagaggtccaaggtctgggaggagtacaagcccatcttcctcgacg 268
           |||||| ||||||||| ||||||||||| ||||||||||||||||||||||| ||  | |
Sbjct: 89  ggtacaggcacaagaaaaggtccaaggtttgggaggagtacaagcccatctttctgaatg 148

                                                                       
Query: 269 gcaaggtccagttcgctgagtgcctctattgccacaaccggctcagctgcaaggactcca 328
           | ||||| ||||| || ||||| ||||| ||||| || || ||||||||||| || ||||
Sbjct: 149 ggaaggttcagtttgcggagtgtctctactgccataatcgcctcagctgcaaagattcca 208

                                                                       
Query: 329 acggcaccagccacctgtggcgccaccagaagatctgcccgggcaagacggaggtcgcgg 388
           ||||||| ||||| || ||||| || ||||| |||||||| |||||   |||||  ||||
Sbjct: 209 acggcacaagccatctatggcggcatcagaaaatctgccctggcaa---ggaggaagcgg 265

                                                           
Query: 389 cggagaggcaacagaaggattcctacttcccatatgttttgctgaatg 436
           || |||||| |||||||||||||||||||||||  |||||| ||||||
Sbjct: 266 cgcagaggcgacagaaggattcctacttcccatgcgttttggtgaatg 313

---

>dbj|AK099285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128I11, full
           insert sequence
          Length = 3035

 Score =  170 bits (86), Expect = 3e-39
 Identities = 193/228 (84%), Gaps = 3/228 (1%)
 Strand = Plus / Plus

                                                                       
Query: 209 ggtacaagcacaagaagaggtccaaggtctgggaggagtacaagcccatcttcctcgacg 268
           |||||| ||||||||| ||||||||||| ||||||||||||||||||||||| ||  | |
Sbjct: 366 ggtacaggcacaagaaaaggtccaaggtttgggaggagtacaagcccatctttctgaatg 425

                                                                       
Query: 269 gcaaggtccagttcgctgagtgcctctattgccacaaccggctcagctgcaaggactcca 328
           | ||||| ||||| || ||||| ||||| ||||| || || ||||||||||| || ||||
Sbjct: 426 ggaaggttcagtttgcggagtgtctctactgccataatcgcctcagctgcaaagattcca 485

                                                                       
Query: 329 acggcaccagccacctgtggcgccaccagaagatctgcccgggcaagacggaggtcgcgg 388
           ||||||| ||||| || ||||| || ||||| |||||||| |||||   |||||  ||||
Sbjct: 486 acggcacaagccatctatggcggcatcagaaaatctgccctggcaa---ggaggaagcgg 542

                                                           
Query: 389 cggagaggcaacagaaggattcctacttcccatatgttttgctgaatg 436
           || |||||| |||||||||||||||||||||||  |||||| ||||||
Sbjct: 543 cgcagaggcgacagaaggattcctacttcccatgcgttttggtgaatg 590

---

>dbj|AK072594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125K02, full
           insert sequence
          Length = 1023

 Score =  170 bits (86), Expect = 3e-39
 Identities = 193/228 (84%), Gaps = 3/228 (1%)
 Strand = Plus / Plus

                                                                       
Query: 209 ggtacaagcacaagaagaggtccaaggtctgggaggagtacaagcccatcttcctcgacg 268
           |||||| ||||||||| ||||||||||| ||||||||||||||||||||||| ||  | |
Sbjct: 354 ggtacaggcacaagaaaaggtccaaggtttgggaggagtacaagcccatctttctgaatg 413

                                                                       
Query: 269 gcaaggtccagttcgctgagtgcctctattgccacaaccggctcagctgcaaggactcca 328
           | ||||| ||||| || ||||| ||||| ||||| || || ||||||||||| || ||||
Sbjct: 414 ggaaggttcagtttgcggagtgtctctactgccataatcgcctcagctgcaaagattcca 473

                                                                       
Query: 329 acggcaccagccacctgtggcgccaccagaagatctgcccgggcaagacggaggtcgcgg 388
           ||||||| ||||| || ||||| || ||||| |||||||| |||||   |||||  ||||
Sbjct: 474 acggcacaagccatctatggcggcatcagaaaatctgccctggcaa---ggaggaagcgg 530

                                                           
Query: 389 cggagaggcaacagaaggattcctacttcccatatgttttgctgaatg 436
           || |||||| |||||||||||||||||||||||  |||||| ||||||
Sbjct: 531 cgcagaggcgacagaaggattcctacttcccatgcgttttggtgaatg 578

---

>dbj|AK066078.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050K18, full
           insert sequence
          Length = 3096

 Score =  170 bits (86), Expect = 3e-39
 Identities = 193/228 (84%), Gaps = 3/228 (1%)
 Strand = Plus / Plus

                                                                       
Query: 209 ggtacaagcacaagaagaggtccaaggtctgggaggagtacaagcccatcttcctcgacg 268
           |||||| ||||||||| ||||||||||| ||||||||||||||||||||||| ||  | |
Sbjct: 432 ggtacaggcacaagaaaaggtccaaggtttgggaggagtacaagcccatctttctgaatg 491

                                                                       
Query: 269 gcaaggtccagttcgctgagtgcctctattgccacaaccggctcagctgcaaggactcca 328
           | ||||| ||||| || ||||| ||||| ||||| || || ||||||||||| || ||||
Sbjct: 492 ggaaggttcagtttgcggagtgtctctactgccataatcgcctcagctgcaaagattcca 551

                                                                       
Query: 329 acggcaccagccacctgtggcgccaccagaagatctgcccgggcaagacggaggtcgcgg 388
           ||||||| ||||| || ||||| || ||||| |||||||| |||||   |||||  ||||
Sbjct: 552 acggcacaagccatctatggcggcatcagaaaatctgccctggcaa---ggaggaagcgg 608

                                                           
Query: 389 cggagaggcaacagaaggattcctacttcccatatgttttgctgaatg 436
           || |||||| |||||||||||||||||||||||  |||||| ||||||
Sbjct: 609 cgcagaggcgacagaaggattcctacttcccatgcgttttggtgaatg 656

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  165 bits (83), Expect = 2e-37
 Identities = 181/213 (84%), Gaps = 3/213 (1%)
 Strand = Plus / Minus

                                                                            
Query: 209      ggtacaagcacaagaagaggtccaaggtctgggaggagtacaagcccatcttcctcgacg 268
                |||||| ||||||||| ||||||||||| ||||||||||||||||||||||| ||  | |
Sbjct: 32014570 ggtacaggcacaagaaaaggtccaaggtttgggaggagtacaagcccatctttctgaatg 32014511

                                                                            
Query: 269      gcaaggtccagttcgctgagtgcctctattgccacaaccggctcagctgcaaggactcca 328
                | ||||| ||||| || ||||| ||||| ||||| || || ||||||||||| || ||||
Sbjct: 32014510 ggaaggttcagtttgcggagtgtctctactgccataatcgcctcagctgcaaagattcca 32014451

                                                                            
Query: 329      acggcaccagccacctgtggcgccaccagaagatctgcccgggcaagacggaggtcgcgg 388
                ||||||| ||||| || ||||| || ||||| |||||||| |||||   |||||  ||||
Sbjct: 32014450 acggcacaagccatctatggcggcatcagaaaatctgccctggcaa---ggaggaagcgg 32014394

                                                 
Query: 389      cggagaggcaacagaaggattcctacttcccat 421
                || |||||| |||||||||||||||||||||||
Sbjct: 32014393 cgcagaggcgacagaaggattcctacttcccat 32014361

---

>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06,
             complete sequence
          Length = 141752

 Score =  165 bits (83), Expect = 2e-37
 Identities = 181/213 (84%), Gaps = 3/213 (1%)
 Strand = Plus / Minus

                                                                         
Query: 209   ggtacaagcacaagaagaggtccaaggtctgggaggagtacaagcccatcttcctcgacg 268
             |||||| ||||||||| ||||||||||| ||||||||||||||||||||||| ||  | |
Sbjct: 35277 ggtacaggcacaagaaaaggtccaaggtttgggaggagtacaagcccatctttctgaatg 35218

                                                                         
Query: 269   gcaaggtccagttcgctgagtgcctctattgccacaaccggctcagctgcaaggactcca 328
             | ||||| ||||| || ||||| ||||| ||||| || || ||||||||||| || ||||
Sbjct: 35217 ggaaggttcagtttgcggagtgtctctactgccataatcgcctcagctgcaaagattcca 35158

                                                                         
Query: 329   acggcaccagccacctgtggcgccaccagaagatctgcccgggcaagacggaggtcgcgg 388
             ||||||| ||||| || ||||| || ||||| |||||||| |||||   |||||  ||||
Sbjct: 35157 acggcacaagccatctatggcggcatcagaaaatctgccctggcaa---ggaggaagcgg 35101

                                              
Query: 389   cggagaggcaacagaaggattcctacttcccat 421
             || |||||| |||||||||||||||||||||||
Sbjct: 35100 cgcagaggcgacagaaggattcctacttcccat 35068

---

>dbj|AK066646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071L19, full
           insert sequence
          Length = 2918

 Score =  163 bits (82), Expect = 6e-37
 Identities = 192/228 (84%), Gaps = 3/228 (1%)
 Strand = Plus / Plus

                                                                       
Query: 209 ggtacaagcacaagaagaggtccaaggtctgggaggagtacaagcccatcttcctcgacg 268
           |||||| ||||||||| ||||||||||| ||||||||||||||||||||||| ||  | |
Sbjct: 356 ggtacaggcacaagaaaaggtccaaggtttgggaggagtacaagcccatctttctgaatg 415

                                                                       
Query: 269 gcaaggtccagttcgctgagtgcctctattgccacaaccggctcagctgcaaggactcca 328
           | ||||| ||||| || ||||| |||||  |||| || || ||||||||||| || ||||
Sbjct: 416 ggaaggttcagtttgcggagtgtctctacagccataatcgcctcagctgcaaagattcca 475

                                                                       
Query: 329 acggcaccagccacctgtggcgccaccagaagatctgcccgggcaagacggaggtcgcgg 388
           ||||||| ||||| || ||||| || ||||| |||||||| |||||   |||||  ||||
Sbjct: 476 acggcacaagccatctatggcggcatcagaaaatctgccctggcaa---ggaggaagcgg 532

                                                           
Query: 389 cggagaggcaacagaaggattcctacttcccatatgttttgctgaatg 436
           || |||||| |||||||||||||||||||||||  |||||| ||||||
Sbjct: 533 cgcagaggcgacagaaggattcctacttcccatgcgttttggtgaatg 580

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                       
Query: 220     aagaagaggtccaaggtctgggaggagtacaagcccatct 259
               ||||| ||||||||||| ||||| ||||||||||| ||||
Sbjct: 4707454 aagaaaaggtccaaggtgtgggatgagtacaagcctatct 4707493

---

>dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0455A11
          Length = 158629

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 220   aagaagaggtccaaggtctgggaggagtacaagcccatct 259
             ||||| ||||||||||| ||||| ||||||||||| ||||
Sbjct: 65470 aagaaaaggtccaaggtgtgggatgagtacaagcctatct 65509

---

>gb|BT016283.1| Zea mays clone Contig116 mRNA sequence
          Length = 972

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 126 tgaggtggaggtggacgtggacgtgga 152
           |||||||| ||||||||||||||||||
Sbjct: 614 tgaggtgggggtggacgtggacgtgga 640

---

>gb|AC147667.3| Pan troglodytes BAC clone CH251-114F17 from Y, complete sequence
          Length = 182271

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 127    gaggtggaggtggacgtggacgtggac 153
              |||||||||||||||||||| ||||||
Sbjct: 179947 gaggtggaggtggacgtggaggtggac 179921



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 129    ggtggaggtggacgtggacgtgga 152
              |||||||||||| |||||||||||
Sbjct: 179951 ggtggaggtggaggtggacgtgga 179928

---

>dbj|BS000597.1| Pan troglodytes chromosome Y clone:PTB-206N19, complete sequences
          Length = 205779

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 127   gaggtggaggtggacgtggacgtggac 153
             |||||||||||||||||||| ||||||
Sbjct: 26224 gaggtggaggtggacgtggaggtggac 26250



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 129   ggtggaggtggacgtggacgtgga 152
             |||||||||||| |||||||||||
Sbjct: 26220 ggtggaggtggaggtggacgtgga 26243

---

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 127      gaggtggaggtggacgtggacgtggac 153
                |||||||||||||||||||| ||||||
Sbjct: 10048221 gaggtggaggtggacgtggaggtggac 10048195



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 127     gaggtggaggtggacgtggacgtgga 152
               |||||||||||||||||||| |||||
Sbjct: 4219534 gaggtggaggtggacgtggaggtgga 4219559



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 129      ggtggaggtggacgtggacgtgga 152
                |||||||||||| |||||||||||
Sbjct: 10048225 ggtggaggtggaggtggacgtgga 10048202



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 129     ggtggaggtggacgtggacgtgga 152
               |||||||||||| |||||||||||
Sbjct: 4219530 ggtggaggtggaggtggacgtgga 4219553

---

>gb|AC164571.3| Pan troglodytes BAC clone CH251-967O8 from chromosome y, complete
            sequence
          Length = 225200

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 127  gaggtggaggtggacgtggacgtggac 153
            |||||||||||||||||||| ||||||
Sbjct: 4840 gaggtggaggtggacgtggaggtggac 4814



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 129  ggtggaggtggacgtggacgtgga 152
            |||||||||||| |||||||||||
Sbjct: 4844 ggtggaggtggaggtggacgtgga 4821

---

>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence
          Length = 505334

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 254    ccatcttcctcgacggcaaggtc 276
              |||||||||||||||||||||||
Sbjct: 411106 ccatcttcctcgacggcaaggtc 411128

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 118      gaggagcatgaggtggaggtggacgtggacgtgga 152
                |||||||| |||||||||||||| ||||| |||||
Sbjct: 26296906 gaggagcaggaggtggaggtggaggtggaggtgga 26296940

---

>gb|AC148940.5| Pan troglodytes BAC clone CH251-96J19 from chromosome y, complete
             sequence
          Length = 182743

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 127   gaggtggaggtggacgtggacgtggac 153
             |||||||||||||||||||| ||||||
Sbjct: 97576 gaggtggaggtggacgtggaggtggac 97550



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 129   ggtggaggtggacgtggacgtgga 152
             |||||||||||| |||||||||||
Sbjct: 97580 ggtggaggtggaggtggacgtgga 97557

---

>dbj|AB120430.1| Oryza sativa (japonica cultivar-group) chloroplast rpoT2 mRNA for
           T7 bacteriophage-type single subunit RNA polymerase,
           complete cds
          Length = 3710

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 118 gaggagcatgaggtggaggtggacgtggacgtgga 152
           |||||||| |||||||||||||| ||||| |||||
Sbjct: 390 gaggagcaggaggtggaggtggaggtggaggtgga 424

---

>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0453H04
          Length = 175047

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 118    gaggagcatgaggtggaggtggacgtggacgtgga 152
              |||||||| |||||||||||||| ||||| |||||
Sbjct: 161446 gaggagcaggaggtggaggtggaggtggaggtgga 161480

---

>dbj|AB096015.1| Oryza sativa (japonica cultivar-group) rpoT2 mRNA for RpoT2,
           complete cds
          Length = 2862

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 118 gaggagcatgaggtggaggtggacgtggacgtgga 152
           |||||||| |||||||||||||| ||||| |||||
Sbjct: 247 gaggagcaggaggtggaggtggaggtggaggtgga 281

---

>ref|XM_706213.1| Candida albicans SC5314 hypothetical protein (CaO19.6606), mRNA
          Length = 1365

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 130 gtggaggtggacgtggacgtggacaa 155
           ||||| ||||||||||||||||||||
Sbjct: 154 gtggacgtggacgtggacgtggacaa 129



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 130 gtggaggtggacgtggacgtggac 153
           ||||| ||||||||||||||||||
Sbjct: 160 gtggacgtggacgtggacgtggac 137

---

>gb|AC147660.2| Pan troglodytes BAC clone CH251-389M10 from Y, complete sequence
          Length = 175868

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 127   gaggtggaggtggacgtggacgtgga 152
             |||||||||||||||||||| |||||
Sbjct: 15463 gaggtggaggtggacgtggaggtgga 15438



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 129   ggtggaggtggacgtggacgtgga 152
             |||||||||||| |||||||||||
Sbjct: 15467 ggtggaggtggaggtggacgtgga 15444

---

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 331     ggcaccagccacctgtggcgccacca 356
               ||||||||||||||||| ||||||||
Sbjct: 4407563 ggcaccagccacctgtgacgccacca 4407588

---

>gb|AC150279.2| Pan troglodytes BAC clone CH251-100M4 from chromosome y, complete
              sequence
          Length = 171329

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 127    gaggtggaggtggacgtggacgtgga 152
              |||||||||||||||||||| |||||
Sbjct: 167466 gaggtggaggtggacgtggaggtgga 167441



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 129    ggtggaggtggacgtggacgtgga 152
              |||||||||||| |||||||||||
Sbjct: 167470 ggtggaggtggaggtggacgtgga 167447

---

>gb|AC150878.5| Pan troglodytes BAC clone CH251-589A4 from chromosome y, complete
             sequence
          Length = 42703

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 127   gaggtggaggtggacgtggacgtgga 152
             |||||||||||||||||||| |||||
Sbjct: 10913 gaggtggaggtggacgtggaggtgga 10888



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 129   ggtggaggtggacgtggacgtgga 152
             |||||||||||| |||||||||||
Sbjct: 10917 ggtggaggtggaggtggacgtgga 10894

---

>ref|NM_120858.2| Arabidopsis thaliana actin binding AT5G07760 mRNA, complete cds
          Length = 2562

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 127 gaggtggaggtggacgtggacgtgg 151
           |||||||||||||| ||||||||||
Sbjct: 226 gaggtggaggtggaggtggacgtgg 202

---

>gb|U68053.1|PLU68053 Planococcus lilacinus clone NRC50 nuclease resistant chromatin
           sequence
          Length = 375

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 129 ggtggaggtggacgtggacgtggac 153
           |||||| ||||||||||||||||||
Sbjct: 180 ggtggacgtggacgtggacgtggac 156



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 130 gtggaggtggacgtggacgtggac 153
           ||||| ||||||||||||||||||
Sbjct: 173 gtggacgtggacgtggacgtggac 150



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 130 gtggaggtggacgtggacgtggac 153
           ||||| ||||||||||||||||||
Sbjct: 167 gtggacgtggacgtggacgtggac 144

---

>gb|AC069288.7| Homo sapiens BAC clone RP11-416J17 from 7, complete sequence
          Length = 145709

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 130    gtggaggtggacgtggacgtggaca 154
              ||||| |||||||||||||||||||
Sbjct: 137281 gtggacgtggacgtggacgtggaca 137257



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 130    gtggaggtggacgtggacgtggac 153
              ||||| ||||||||||||||||||
Sbjct: 137287 gtggatgtggacgtggacgtggac 137264

---

>ref|XM_850365.1| PREDICTED: Canis familiaris similar to MAX dimerization protein 1
           (LOC612631), mRNA
          Length = 1134

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 132 ggaggtggacgtggacgtgga 152
           |||||||||||||||||||||
Sbjct: 480 ggaggtggacgtggacgtgga 500

---

>gb|AC122836.4| Mus musculus BAC clone RP23-188B13 from 7, complete sequence
          Length = 222390

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 308    ggctcagctgcaaggactcca 328
              |||||||||||||||||||||
Sbjct: 183478 ggctcagctgcaaggactcca 183498

---

>emb|X95262.1|LETFM5GEN L.esculentum Tfm5 gene
          Length = 990

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 127 gaggtggaggtggacgtggacgtggacaa 155
           |||||||||||||| ||||| ||||||||
Sbjct: 676 gaggtggaggtggaggtggaggtggacaa 704

---

>gb|AC102076.9| Mus musculus chromosome 7, clone RP23-401P12, complete sequence
          Length = 199219

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 308    ggctcagctgcaaggactcca 328
              |||||||||||||||||||||
Sbjct: 105697 ggctcagctgcaaggactcca 105677

---

>ref|XM_394607.2| PREDICTED: Apis mellifera similar to CG6634-PA (LOC411133), mRNA
          Length = 1089

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 132 ggaggtggacgtggacgtgga 152
           |||||||||||||||||||||
Sbjct: 165 ggaggtggacgtggacgtgga 185

---

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 133     gaggtggacgtggacgtggac 153
               |||||||||||||||||||||
Sbjct: 4198395 gaggtggacgtggacgtggac 4198375

---

>dbj|AB010070.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK20
          Length = 78172

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 127   gaggtggaggtggacgtggacgtgg 151
             |||||||||||||| ||||||||||
Sbjct: 68952 gaggtggaggtggaggtggacgtgg 68928

---

>ref|NM_121823.1| Arabidopsis thaliana RNA binding / rRNA binding AT5G18180 mRNA,
           complete cds
          Length = 570

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 130 gtggaggtggacgtggacgtggac 153
           ||||| ||||||||||||||||||
Sbjct: 68  gtggacgtggacgtggacgtggac 91



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 130 gtggaggtggacgtggacgtggac 153
           ||||| ||||||||||||||||||
Sbjct: 62  gtggacgtggacgtggacgtggac 85

---

>ref|XM_450934.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 660

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 136 gtggacgtggacgtggacaa 155
           ||||||||||||||||||||
Sbjct: 212 gtggacgtggacgtggacaa 193

---

>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete
              sequence
          Length = 762694

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 129    ggtggaggtggacgtggacgtgga 152
              |||||| |||||||||||||||||
Sbjct: 667446 ggtggacgtggacgtggacgtgga 667469

---

>gb|AC135920.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0015G13, complete sequence
          Length = 143966

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 423   tgttttgctgaatggagata 442
             ||||||||||||||||||||
Sbjct: 19873 tgttttgctgaatggagata 19892

---

>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12,
              complete sequence
          Length = 172647

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 423    tgttttgctgaatggagata 442
              ||||||||||||||||||||
Sbjct: 148489 tgttttgctgaatggagata 148508

---

>gb|AC135240.2| Mus musculus BAC clone RP24-63O24 from chromosome 5, complete sequence
          Length = 196371

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   gctcagctgcaaggactcca 328
             ||||||||||||||||||||
Sbjct: 46735 gctcagctgcaaggactcca 46754

---

>gb|AC140420.4| Mus musculus BAC clone RP24-440F22 from chromosome 5, complete sequence
          Length = 157377

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   gctcagctgcaaggactcca 328
             ||||||||||||||||||||
Sbjct: 24804 gctcagctgcaaggactcca 24785

---

>ref|NM_021168.2| Homo sapiens RAB40C, member RAS oncogene family (RAB40C), mRNA
          Length = 2632

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 134  aggtggacgtggacgtggac 153
            ||||||||||||||||||||
Sbjct: 1944 aggtggacgtggacgtggac 1925

---

>gb|AC118610.9| Mus musculus chromosome 6, clone RP23-178I17, complete sequence
          Length = 255673

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 278   agttcgctgagtgcctctattgcc 301
             |||||||||||||||| |||||||
Sbjct: 76248 agttcgctgagtgcctttattgcc 76225

---

>ref|XM_568696.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNN02140) partial mRNA
          Length = 4401

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 129  ggtggaggtggacgtggacgtgga 152
            |||||| |||||||||||||||||
Sbjct: 2039 ggtggacgtggacgtggacgtgga 2062

---

>gb|AC121801.2| Mus musculus BAC clone RP23-432P18 from 14, complete sequence
          Length = 194612

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 130   gtggaggtggacgtggacgtggac 153
             ||||| ||||||||||||||||||
Sbjct: 84111 gtggacgtggacgtggacgtggac 84088



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 130   gtggaggtggacgtggacgtggac 153
             ||||| ||||||||||||||||||
Sbjct: 84105 gtggacgtggacgtggacgtggac 84082

---

>ref|XM_860540.1| PREDICTED: Canis familiaris similar to MAX dimerization protein 3,
           transcript variant 2 (LOC489093), mRNA
          Length = 979

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 127 gaggtggaggtggacgtgga 146
           ||||||||||||||||||||
Sbjct: 478 gaggtggaggtggacgtgga 497

---

>ref|XM_546209.2| PREDICTED: Canis familiaris similar to MAX dimerization protein 3,
           transcript variant 1 (LOC489093), mRNA
          Length = 1009

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 127 gaggtggaggtggacgtgga 146
           ||||||||||||||||||||
Sbjct: 508 gaggtggaggtggacgtgga 527

---

>emb|Z84479.1|HS398G5 Human DNA sequence from clone LA16c-398G5 on chromosome 16, complete
             sequence
          Length = 31697

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   aggtggacgtggacgtggac 153
             ||||||||||||||||||||
Sbjct: 23938 aggtggacgtggacgtggac 23919

---

>emb|AL591806.16| Human DNA sequence from clone RP11-544M22 on chromosome 1 Contains the 3'
              end of a novel gene, the 5' end of the ITLN2 gene for
              intelectin 2, the F11R gene for F11 receptor, the gene for
              KAT protein, the USF1 gene for upstream transcription
              factor 1, the gene for a novel protein, the PVRL4 gene for
              poliovirus receptor-related 4, a novel gene, the gene for a
              novel protein (MGC33338), the PFDN2 gene for prefoldin 2,
              the NIT1 gene for nitrilase 1 and the DEDD gene for death
              effector domain containing, complete sequence
          Length = 200822

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 333    caccagccacctgtggcgccacca 356
              ||||||||| ||||||||||||||
Sbjct: 186987 caccagccagctgtggcgccacca 186964

---

>emb|AL391628.18| Human DNA sequence from clone RP11-375H24 on chromosome 1 Contains
            the 3' end of the PSEN2 gene for presenilin 2 (Alzheimer
            disease 4) and the 5' end of a variant of the CABC1 gene
            for chaperone ABC1 activity of bc1 complex like (S.
            pombe), complete sequence
          Length = 62906

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  gtacaagcacaagaagaggt 229
            ||||||||||||||||||||
Sbjct: 6378 gtacaagcacaagaagaggt 6397

---

>emb|AL121827.34|HSA261N11 Human DNA sequence from clone RP11-261N11 on chromosome 20, complete
              sequence
          Length = 184223

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 130    gtggaggtggacgtggacgtggac 153
              ||||| ||||||||||||||||||
Sbjct: 120765 gtggacgtggacgtggacgtggac 120742

---

>emb|X72957.1|XLNUCLEO X.laevis mRNA for nucleolin
          Length = 2580

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 127  gaggtggaggtggacgtgga 146
            ||||||||||||||||||||
Sbjct: 2057 gaggtggaggtggacgtgga 2076

---

>gb|BC028696.1| Homo sapiens RAB40C, member RAS oncogene family, mRNA (cDNA clone
            MGC:26738 IMAGE:4826800), complete cds
          Length = 2632

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 134  aggtggacgtggacgtggac 153
            ||||||||||||||||||||
Sbjct: 1944 aggtggacgtggacgtggac 1925

---

>gb|AE006464.1| Homo sapiens 16p13.3 sequence section 3 of 8
          Length = 256073

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    aggtggacgtggacgtggac 153
              ||||||||||||||||||||
Sbjct: 100835 aggtggacgtggacgtggac 100816

---

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 230     ccaaggtctgggaggagtac 249
               ||||||||||||||||||||
Sbjct: 3080056 ccaaggtctgggaggagtac 3080037

---

>gb|DQ093071.1| Homo sapiens cholinergic receptor, nicotinic, alpha polypeptide 4
             (CHRNA4) gene, complete cds
          Length = 20632

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 130   gtggaggtggacgtggacgtggac 153
             ||||| ||||||||||||||||||
Sbjct: 12097 gtggacgtggacgtggacgtggac 12120

---

>dbj|AB197011.1| Haliotis discus hannai DNA, microsatellite Hdh61
          Length = 308

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 130 gtggaggtggacgtggacgtggac 153
           ||||| ||||||||||||||||||
Sbjct: 302 gtggacgtggacgtggacgtggac 279

---

>gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, complete genome
          Length = 190289

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 129    ggtggaggtggacgtggacgtgga 152
              |||||| |||||||||||||||||
Sbjct: 130477 ggtggacgtggacgtggacgtgga 130454

---

>gb|AC153932.10| Mus musculus 10 BAC RP24-266J23 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 162628

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 130    gtggaggtggacgtggacgtggac 153
              ||||| ||||||||||||||||||
Sbjct: 135476 gtggacgtggacgtggacgtggac 135499

---

>gb|U86935.1|MCU86935 Molluscum contagiosum virus subtype 1 clone B1-47 genomic sequence
          Length = 1962

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 129  ggtggaggtggacgtggacgtgga 152
            |||||| |||||||||||||||||
Sbjct: 1659 ggtggacgtggacgtggacgtgga 1636

---

>gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, region 18C-18D, BAC clone
              BACR27L16, complete sequence
          Length = 182623

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 131    tggaggtggacgtggacgtggaca 154
              |||||||||| |||||||||||||
Sbjct: 172657 tggaggtggaagtggacgtggaca 172634

---

>ref|XM_393930.2| PREDICTED: Apis mellifera similar to CG31632-PA (LOC410450), mRNA
          Length = 1389

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 133 gaggtggacgtggacgtgga 152
           ||||||||||||||||||||
Sbjct: 319 gaggtggacgtggacgtgga 338

---

>gb|AC007814.6|AC007814 Drosophila melanogaster, chromosome 3R, region 91D-91E, BAC clone
            BACR44N12, complete sequence
          Length = 204173

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 130  gtggaggtggacgtggacgtggac 153
            ||||| ||||||||||||||||||
Sbjct: 2445 gtggacgtggacgtggacgtggac 2468

---

>ref|XM_392261.2| PREDICTED: Apis mellifera similar to ENSANGP00000015840
           (LOC408726), mRNA
          Length = 1175

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 156 catcatgaagacggaggtgt 175
           ||||||||||||||||||||
Sbjct: 165 catcatgaagacggaggtgt 184

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 136      gtggacgtggacgtggacaa 155
                ||||||||||||||||||||
Sbjct: 17674797 gtggacgtggacgtggacaa 17674778

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 423     tgttttgctgaatggagata 442
               ||||||||||||||||||||
Sbjct: 6318134 tgttttgctgaatggagata 6318153

---

>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone
              BACR10M08, complete sequence
          Length = 180213

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 131    tggaggtggacgtggacgtggaca 154
              |||||||||| |||||||||||||
Sbjct: 111137 tggaggtggaagtggacgtggaca 111114

---

>gb|AC010917.16|AC010917 Drosophila melanogaster, chromosome X, region 19E-19E, BAC clone
             BACR28L06, complete sequence
          Length = 174820

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 131   tggaggtggacgtggacgtggaca 154
             |||| |||||||||||||||||||
Sbjct: 58298 tggacgtggacgtggacgtggaca 58275

---

>gb|AC011706.14|AC011706 Drosophila melanogaster, chromosome X, region 19E-19E, BAC clone
             BACR03J18, complete sequence
          Length = 161614

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 131   tggaggtggacgtggacgtggaca 154
             |||| |||||||||||||||||||
Sbjct: 15169 tggacgtggacgtggacgtggaca 15146

---

>gb|AC007813.4|AC007813 Drosophila melanogaster, chromosome 3R, region 91C-91D, BAC clone
              BACR40J10, complete sequence
          Length = 160089

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 130    gtggaggtggacgtggacgtggac 153
              ||||| ||||||||||||||||||
Sbjct: 140964 gtggacgtggacgtggacgtggac 140987

---

>gb|AC159333.7| Mus musculus 10 BAC RP23-409C14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 201801

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 130    gtggaggtggacgtggacgtggac 153
              ||||| ||||||||||||||||||
Sbjct: 190548 gtggacgtggacgtggacgtggac 190525

---

>gb|AY190945.1| Drosophila pseudoobscura clone DPSF01_10_G08 (D1416) genomic sequence
          Length = 38050

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 130   gtggaggtggacgtggacgtggac 153
             ||||| ||||||||||||||||||
Sbjct: 26898 gtggacgtggacgtggacgtggac 26921



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 130   gtggaggtggacgtggacgtggac 153
             ||||| ||||||||||||||||||
Sbjct: 26892 gtggacgtggacgtggacgtggac 26915

---

>dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1005_D12
          Length = 150588

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    gtggacgtggacgtggacaa 155
              ||||||||||||||||||||
Sbjct: 123519 gtggacgtggacgtggacaa 123500

---

>dbj|AB012246.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRG7
          Length = 83948

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 130   gtggaggtggacgtggacgtggac 153
             ||||| ||||||||||||||||||
Sbjct: 33050 gtggacgtggacgtggacgtggac 33027



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 130   gtggaggtggacgtggacgtggac 153
             ||||| ||||||||||||||||||
Sbjct: 33044 gtggacgtggacgtggacgtggac 33021

---

>dbj|AK000584.1| Homo sapiens cDNA FLJ20577 fis, clone REC00709
          Length = 971

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 134 aggtggacgtggacgtggac 153
           ||||||||||||||||||||
Sbjct: 277 aggtggacgtggacgtggac 258

---

>gb|AE003723.5| Drosophila melanogaster chromosome 3R, section 61 of 118 of the complete
              sequence
          Length = 255619

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 130    gtggaggtggacgtggacgtggac 153
              ||||| ||||||||||||||||||
Sbjct: 237097 gtggacgtggacgtggacgtggac 237120

---

>gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 of 74 of the complete
              sequence
          Length = 300051

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 131    tggaggtggacgtggacgtggaca 154
              |||| |||||||||||||||||||
Sbjct: 119534 tggacgtggacgtggacgtggaca 119511

---

>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete
              sequence
          Length = 346474

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 131    tggaggtggacgtggacgtggaca 154
              |||||||||| |||||||||||||
Sbjct: 216903 tggaggtggaagtggacgtggaca 216880

---

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 305     accggctcagctgcaaggac 324
               ||||||||||||||||||||
Sbjct: 1887717 accggctcagctgcaaggac 1887698

---

>gb|AC145958.3| Gallus gallus BAC clone CH261-16J12 from chromosome unknown, complete
              sequence
          Length = 207441

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     cccctccccggccctcgcaa 44
              ||||||||||||||||||||
Sbjct: 182029 cccctccccggccctcgcaa 182048

---

>gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 109560

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 130   gtggaggtggacgtggacgtggac 153
             |||||||||||| |||||||||||
Sbjct: 32596 gtggaggtggacatggacgtggac 32573

---

>emb|AL611950.17| Mouse DNA sequence from clone RP23-45A18 on chromosome 4, complete
              sequence
          Length = 161331

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 401    agaaggattcctacttccca 420
              ||||||||||||||||||||
Sbjct: 135214 agaaggattcctacttccca 135233


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,477,684
Number of Sequences: 3902068
Number of extensions: 3477684
Number of successful extensions: 69898
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69080
Number of HSP's gapped (non-prelim): 737
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---