>Y8I5_ENCCU (Q8SU92) Hypothetical protein ECU10_1850|
          Length = 268

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
 Frame = +3

Query: 144 RFLRLLQPIRMD----------QWSSHN-PQG*INSTVQ*TLVHFLVLGFFILAQVQLSV 290
           RF+ LL P               W SHN P+G +++T+  TL + L L F I++ + ++ 
Sbjct: 56  RFITLLLPFSYSAVQYAVLLHTNWKSHNKPEGILHTTLYYTL-NLLFLAFSIISILSITT 114

Query: 291 DPIQRWR 311
            PI +W+
Sbjct: 115 LPINKWK 121

>Y304_ENCCU (Q8SW83) Hypothetical protein ECU03_0040|
          Length = 268

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 16/44 (36%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
 Frame = +3

Query: 183 WSSHN-PQG*INSTVQ*TLVHFLVLGFFILAQVQLSVDPIQRWR 311
           W SHN P+G +++T+  TL + L+L F I++ + ++  PI +W+
Sbjct: 79  WKSHNKPEGILHTTLYYTL-NLLLLAFSIISILSITTLPINKWK 121

>KAISO_MOUSE (Q8BN78) Transcriptional regulator Kaiso (Zinc finger and BTB|
           domain-containing protein 33)
          Length = 671

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 13/57 (22%), Positives = 28/57 (49%)
 Frame = +1

Query: 25  KSLELKSFIFLELLRPSLPEIKSGAEGFAIRGSLWPPIRPDSCASSSRSAWTNGVLI 195
           KSL+++ + +L     ++P +K  A G+ +     PP+   S    ++S +   + I
Sbjct: 588 KSLQIRQYAYLSNKSSAMPVMKDDAVGYKVDAGKEPPVGTTSTPPQNKSTFWEDIFI 644

>HELC1_HUMAN (Q8N3C0) Activating signal cointegrator 1 complex subunit 3 (EC|
            3.6.1.-) (ASC-1 complex subunit p200) (Trip4 complex
            subunit p200) (Helicase, ATP binding 1)
          Length = 2202

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +3

Query: 399  ASMRSRPRISAHHLRAYPRWRPLLK 473
            +S+ + P I  HHL  + +W+P++K
Sbjct: 1959 SSLLTLPNIENHHLHLFKKWKPIMK 1983

>TRME_PORGI (Q7MVZ2) tRNA modification GTPase trmE|
          Length = 474

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = -3

Query: 200 RVMRTPLVHADRLEEAQESGRIGGHKL--PRIANPSAPDFISGREGR 66
           R  RT ++  ++ E   E+ RIG  +    +++ P+ P FIS REGR
Sbjct: 335 REERTLILLVNKSESLAEADRIGLSETLQTKLSTPTKPIFISAREGR 381

>GP53_BPSP1 (O48407) Putative gene 53 protein|
          Length = 221

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -3

Query: 284 QLDLGKNEEAQDQEMNKSSLHSTVDLTLRVMRTPLVHADRLEEAQE 147
           +L +  N+E Q  +  + SL S  + TL    +P   AD LEE +E
Sbjct: 94  RLQILVNKEVQGSQSTQQSLSSVFESTLEKYNSPDDFADYLEETEE 139


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,257,682
Number of Sequences: 219361
Number of extensions: 1447721
Number of successful extensions: 4121
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4119
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)