ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl46c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
2dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
3dbj|AK119636.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 1e-35
4dbj|AK100713.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 1e-35
5ref|XM_463541.1| Oryza sativa (japonica cultivar-group), predic... 155 2e-34
6gb|AY596586.1| Saccharum officinarum clone SCCCRZ2002H08, comple... 131 2e-27
7gb|AC134047.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.026
8gb|AC128644.4| Oryza sativa (japonica cultivar-group) chromosome... 48 0.026
9gb|AC090018.12| Homo sapiens 3 BAC RP11-1D19 (Roswell Park Cance... 48 0.026
10dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.026
11dbj|AK109545.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
12emb|AJ338620.1|HSA338620 Homo sapiens genomic sequence surroundi... 48 0.026
13emb|AJ340775.1|HSA340775 Homo sapiens genomic sequence surroundi... 48 0.026
14emb|AJ341443.1|HSA341443 Homo sapiens genomic sequence surroundi... 48 0.026
15emb|AJ326070.1|HSA326070 Homo sapiens genomic sequence surroundi... 48 0.026
16gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.026
17gb|AC010295.7| Homo sapiens chromosome 5 clone CTB-143H13, compl... 42 1.6
18ref|XM_690503.1| PREDICTED: Danio rerio similar to sodium-calciu... 42 1.6
19emb|AJ333186.1|HSA333186 Homo sapiens genomic sequence surroundi... 42 1.6
20emb|BX890602.8| Zebrafish DNA sequence from clone DKEYP-109H9 in... 42 1.6
21gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 6.3
22gb|AC163748.6| Mus musculus BAC clone RP23-411N10 from chromosom... 40 6.3
23gb|AF117887.2| Mus musculus protein arginine methyltransferase (... 40 6.3
24ref|XM_598445.2| PREDICTED: Bos taurus similar to Chloride chann... 40 6.3
25ref|XM_877634.1| PREDICTED: Bos taurus similar to Chloride chann... 40 6.3
26gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
27ref|XM_808184.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.3
28ref|XM_811489.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.3
29gb|AC124538.4| Mus musculus BAC clone RP23-338P10 from chromosom... 40 6.3
30gb|AC124175.2| Mus musculus BAC clone RP23-183N18 from 1, comple... 40 6.3
31ref|NM_001030041.2| Rattus norvegicus protein arginine N-methylt... 40 6.3
32ref|NM_001034087.1| Rattus norvegicus protein arginine N-methylt... 40 6.3
33ref|NM_001034088.1| Rattus norvegicus protein arginine N-methylt... 40 6.3
34ref|NM_001034086.1| Rattus norvegicus protein arginine N-methylt... 40 6.3
35ref|NM_021531.2| Mus musculus protein arginine N-methyltransfera... 40 6.3
36dbj|AB214954.1| Streptomyces griseus griE, griF genes for copper... 40 6.3
37gb|AC079935.3| Genomic sequence for Oryza sativa (japonica culti... 40 6.3
38dbj|AK158242.1| Mus musculus adult inner ear cDNA, RIKEN full-le... 40 6.3
39dbj|AK158757.1| Mus musculus visual cortex cDNA, RIKEN full-leng... 40 6.3
40gb|BC003964.1| Mus musculus protein arginine N-methyltransferase... 40 6.3
41gb|BC071267.1| Mus musculus protein arginine N-methyltransferase... 40 6.3
42gb|BC036974.1| Mus musculus protein arginine N-methyltransferase... 40 6.3
43dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
44dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
45dbj|AB201117.1| Rattus norvegicus CARM1-v4 mRNA for coactivator-... 40 6.3
46dbj|AB201116.1| Rattus norvegicus CARM1-v3 mRNA for coactivator-... 40 6.3
47dbj|AB201115.1| Rattus norvegicus CARM1-v2 mRNA for coactivator-... 40 6.3
48dbj|AB201114.1| Rattus norvegicus CARM1-v1 mRNA for coactivator-... 40 6.3
49gb|AC026305.20| Homo sapiens 3 BAC RP11-91A15 (Roswell Park Canc... 40 6.3
50ref|XM_221125.3| PREDICTED: Rattus norvegicus similar to tripart... 40 6.3
51gb|AF202779.1|AF202779 Rhodobacter sphaeroides CcoP (ccoP) gene,... 40 6.3
52dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.3
53dbj|AK107496.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
54emb|AJ341642.1|HSA341642 Homo sapiens genomic sequence surroundi... 40 6.3
55emb|AJ340862.1|HSA340862 Homo sapiens genomic sequence surroundi... 40 6.3
56gb|AF175313.1|AF175313 Oncorhynchus mykiss cardiac sodium-calciu... 40 6.3
57emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.3
58emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.3
59gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
60gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
61emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.3
62emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.3
63gb|M30609.1|MXARTMSD M.xanthus reverse transcriptase (Mx65-RT) g... 40 6.3
64emb|AL607108.17| Mouse DNA sequence from clone RP23-42F6 on chro... 40 6.3
65dbj|AB033571.1| Eptatretus burgeri hgPTPR2Ab mRNA, partial cds 40 6.3 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  159 bits (80), Expect = 1e-35
 Identities = 130/146 (89%), Gaps = 3/146 (2%)
 Strand = Plus / Minus

                                                                            
Query: 191      tgatggcattcggccgaggcgggaagatggacggcaggcggccctcgccgccgtcttcgt 250
                |||||||||| |||||||||  |||||||||||||||||||   ||| ||||||| ||||
Sbjct: 38384272 tgatggcatttggccgaggctcgaagatggacggcaggcgg---tcgtcgccgtcgtcgt 38384216

                                                                            
Query: 251      cgttgtgcacgacgaccaccgtcgtggtgtttgtggcgctctgcgtggtgggcgcctgga 310
                || | |||||||||||||||||||| ||||| |||||||||||| |||| ||||||||||
Sbjct: 38384215 cgctctgcacgacgaccaccgtcgtcgtgttcgtggcgctctgcctggtcggcgcctgga 38384156

                                          
Query: 311      tgatgacgtcgtccaccgtcttcccg 336
                |||||||||| |||||| ||||||||
Sbjct: 38384155 tgatgacgtcatccaccatcttcccg 38384130
to top
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1065E10
          Length = 183580

 Score =  159 bits (80), Expect = 1e-35
 Identities = 130/146 (89%), Gaps = 3/146 (2%)
 Strand = Plus / Minus

                                                                          
Query: 191    tgatggcattcggccgaggcgggaagatggacggcaggcggccctcgccgccgtcttcgt 250
              |||||||||| |||||||||  |||||||||||||||||||   ||| ||||||| ||||
Sbjct: 145097 tgatggcatttggccgaggctcgaagatggacggcaggcgg---tcgtcgccgtcgtcgt 145041

                                                                          
Query: 251    cgttgtgcacgacgaccaccgtcgtggtgtttgtggcgctctgcgtggtgggcgcctgga 310
              || | |||||||||||||||||||| ||||| |||||||||||| |||| ||||||||||
Sbjct: 145040 cgctctgcacgacgaccaccgtcgtcgtgttcgtggcgctctgcctggtcggcgcctgga 144981

                                        
Query: 311    tgatgacgtcgtccaccgtcttcccg 336
              |||||||||| |||||| ||||||||
Sbjct: 144980 tgatgacgtcatccaccatcttcccg 144955
to top
>dbj|AK119636.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F03, full
           insert sequence
          Length = 2826

 Score =  159 bits (80), Expect = 1e-35
 Identities = 130/146 (89%), Gaps = 3/146 (2%)
 Strand = Plus / Plus

                                                                       
Query: 191 tgatggcattcggccgaggcgggaagatggacggcaggcggccctcgccgccgtcttcgt 250
           |||||||||| |||||||||  |||||||||||||||||||   ||| ||||||| ||||
Sbjct: 137 tgatggcatttggccgaggctcgaagatggacggcaggcgg---tcgtcgccgtcgtcgt 193

                                                                       
Query: 251 cgttgtgcacgacgaccaccgtcgtggtgtttgtggcgctctgcgtggtgggcgcctgga 310
           || | |||||||||||||||||||| ||||| |||||||||||| |||| ||||||||||
Sbjct: 194 cgctctgcacgacgaccaccgtcgtcgtgttcgtggcgctctgcctggtcggcgcctgga 253

                                     
Query: 311 tgatgacgtcgtccaccgtcttcccg 336
           |||||||||| |||||| ||||||||
Sbjct: 254 tgatgacgtcatccaccatcttcccg 279
to top
>dbj|AK100713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115H24, full
           insert sequence
          Length = 2988

 Score =  159 bits (80), Expect = 1e-35
 Identities = 130/146 (89%), Gaps = 3/146 (2%)
 Strand = Plus / Plus

                                                                       
Query: 191 tgatggcattcggccgaggcgggaagatggacggcaggcggccctcgccgccgtcttcgt 250
           |||||||||| |||||||||  |||||||||||||||||||   ||| ||||||| ||||
Sbjct: 303 tgatggcatttggccgaggctcgaagatggacggcaggcgg---tcgtcgccgtcgtcgt 359

                                                                       
Query: 251 cgttgtgcacgacgaccaccgtcgtggtgtttgtggcgctctgcgtggtgggcgcctgga 310
           || | |||||||||||||||||||| ||||| |||||||||||| |||| ||||||||||
Sbjct: 360 cgctctgcacgacgaccaccgtcgtcgtgttcgtggcgctctgcctggtcggcgcctgga 419

                                     
Query: 311 tgatgacgtcgtccaccgtcttcccg 336
           |||||||||| |||||| ||||||||
Sbjct: 420 tgatgacgtcatccaccatcttcccg 445
to top
>ref|XM_463541.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2421

 Score =  155 bits (78), Expect = 2e-34
 Identities = 128/144 (88%), Gaps = 3/144 (2%)
 Strand = Plus / Plus

                                                                       
Query: 193 atggcattcggccgaggcgggaagatggacggcaggcggccctcgccgccgtcttcgtcg 252
           |||||||| |||||||||  |||||||||||||||||||   ||| ||||||| ||||||
Sbjct: 1   atggcatttggccgaggctcgaagatggacggcaggcgg---tcgtcgccgtcgtcgtcg 57

                                                                       
Query: 253 ttgtgcacgacgaccaccgtcgtggtgtttgtggcgctctgcgtggtgggcgcctggatg 312
            | |||||||||||||||||||| ||||| |||||||||||| |||| ||||||||||||
Sbjct: 58  ctctgcacgacgaccaccgtcgtcgtgttcgtggcgctctgcctggtcggcgcctggatg 117

                                   
Query: 313 atgacgtcgtccaccgtcttcccg 336
           |||||||| |||||| ||||||||
Sbjct: 118 atgacgtcatccaccatcttcccg 141
to top
>gb|AY596586.1| Saccharum officinarum clone SCCCRZ2002H08, complete sequence
          Length = 2841

 Score =  131 bits (66), Expect = 2e-27
 Identities = 128/148 (86%), Gaps = 3/148 (2%)
 Strand = Plus / Plus

                                                                       
Query: 189 actgatggcattcggccgaggcgggaagatggacggcaggcggccctcgccgccgtcttc 248
           |||||||||||| |||||||| ||||||||||||||| | ||||| ||| || ||||   
Sbjct: 212 actgatggcatttggccgaggtgggaagatggacggccgccggccgtcgtcgtcgtc--- 268

                                                                       
Query: 249 gtcgttgtgcacgacgaccaccgtcgtggtgtttgtggcgctctgcgtggtgggcgcctg 308
           |||||| |||||||| ||||| ||||| || ||||||||||||||| |||| ||||| ||
Sbjct: 269 gtcgttctgcacgaccaccacggtcgtcgtctttgtggcgctctgcctggtcggcgcgtg 328

                                       
Query: 309 gatgatgacgtcgtccaccgtcttcccg 336
           ||||||||| |||||||| |||||||||
Sbjct: 329 gatgatgacctcgtccactgtcttcccg 356
to top
>gb|AC134047.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052O08
              map MAP_LOC, complete sequence
          Length = 154839

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                              
Query: 247    tcgtcgttgtgcacgacgaccaccgtcgtggtgtttgtggcgctctgc 294
              |||||| ||||| ||||| | |||||||| ||||| ||||||||||||
Sbjct: 143183 tcgtcgctgtgctcgacggcgaccgtcgtcgtgttcgtggcgctctgc 143230
to top
>gb|AC128644.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0009F15, complete sequence
          Length = 142289

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 247   tcgtcgttgtgcacgacgaccaccgtcgtggtgtttgtggcgctctgc 294
             |||||| ||||| ||||| | |||||||| ||||| ||||||||||||
Sbjct: 13036 tcgtcgctgtgctcgacggcgaccgtcgtcgtgttcgtggcgctctgc 13083
to top
>gb|AC090018.12| Homo sapiens 3 BAC RP11-1D19 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 205638

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 59     ccccggccggcgaggtgcgcgcgg 82
              ||||||||||||||||||||||||
Sbjct: 108108 ccccggccggcgaggtgcgcgcgg 108085
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                               
Query: 247     tcgtcgttgtgcacgacgaccaccgtcgtggtgtttgtggcgctctgc 294
               |||||| ||||| ||||| | |||||||| ||||| ||||||||||||
Sbjct: 4361673 tcgtcgctgtgctcgacggcgaccgtcgtcgtgttcgtggcgctctgc 4361720



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 233      cctcgccgccgtcttcgtcg 252
                ||||||||||||||||||||
Sbjct: 21277199 cctcgccgccgtcttcgtcg 21277218
to top
>dbj|AK109545.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-E05, full
           insert sequence
          Length = 3015

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 247 tcgtcgttgtgcacgacgaccaccgtcgtggtgtttgtggcgctctgc 294
           |||||| ||||| ||||| | |||||||| ||||| ||||||||||||
Sbjct: 238 tcgtcgctgtgctcgacggcgaccgtcgtcgtgttcgtggcgctctgc 285
to top
>emb|AJ338620.1|HSA338620 Homo sapiens genomic sequence surrounding NotI site, clone
          NB1-803R
          Length = 460

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 59 ccccggccggcgaggtgcgcgcgg 82
          ||||||||||||||||||||||||
Sbjct: 45 ccccggccggcgaggtgcgcgcgg 68
to top
>emb|AJ340775.1|HSA340775 Homo sapiens genomic sequence surrounding NotI site, clone
          NL1-GA3RS
          Length = 667

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 59 ccccggccggcgaggtgcgcgcgg 82
          ||||||||||||||||||||||||
Sbjct: 45 ccccggccggcgaggtgcgcgcgg 68
to top
>emb|AJ341443.1|HSA341443 Homo sapiens genomic sequence surrounding NotI site, clone
          NL1-FL23RS
          Length = 557

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 59 ccccggccggcgaggtgcgcgcgg 82
          ||||||||||||||||||||||||
Sbjct: 45 ccccggccggcgaggtgcgcgcgg 68
to top
>emb|AJ326070.1|HSA326070 Homo sapiens genomic sequence surrounding NotI site, clone
          NR1-194R
          Length = 724

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 59 ccccggccggcgaggtgcgcgcgg 82
          ||||||||||||||||||||||||
Sbjct: 45 ccccggccggcgaggtgcgcgcgg 68
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                               
Query: 247     tcgtcgttgtgcacgacgaccaccgtcgtggtgtttgtggcgctctgc 294
               |||||| ||||| ||||| | |||||||| ||||| ||||||||||||
Sbjct: 4370367 tcgtcgctgtgctcgacggcgaccgtcgtcgtgttcgtggcgctctgc 4370414



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 233      cctcgccgccgtcttcgtcg 252
                ||||||||||||||||||||
Sbjct: 21587398 cctcgccgccgtcttcgtcg 21587417
to top
>gb|AC010295.7| Homo sapiens chromosome 5 clone CTB-143H13, complete sequence
          Length = 108051

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 52   cccagctccccggccggcgag 72
            |||||||||||||||||||||
Sbjct: 7532 cccagctccccggccggcgag 7512
to top
>ref|XM_690503.1| PREDICTED: Danio rerio similar to sodium-calcium exchanger
            (LOC567212), mRNA
          Length = 1422

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 267  caccgtcgtggtgtttgtggcgctc 291
            ||||| |||||||||||||||||||
Sbjct: 1005 caccgccgtggtgtttgtggcgctc 1029
to top
>emb|AJ333186.1|HSA333186 Homo sapiens genomic sequence surrounding NotI site, clone
          NR1-TG13RS
          Length = 600

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 58 tccccggccggcgaggtgcgcgcgg 82
          |||||||||||||||| ||||||||
Sbjct: 45 tccccggccggcgaggggcgcgcgg 69
to top
>emb|BX890602.8| Zebrafish DNA sequence from clone DKEYP-109H9 in linkage group 18,
             complete sequence
          Length = 191296

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 267   caccgtcgtggtgtttgtggcgctc 291
             ||||| |||||||||||||||||||
Sbjct: 48035 caccgccgtggtgtttgtggcgctc 48059
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 224     gcaggcggccctcgccgccg 243
               ||||||||||||||||||||
Sbjct: 2431782 gcaggcggccctcgccgccg 2431801
to top
>gb|AC163748.6| Mus musculus BAC clone RP23-411N10 from chromosome 9, complete sequence
          Length = 226254

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 419    cagaagttggctttggtgaa 438
              ||||||||||||||||||||
Sbjct: 204158 cagaagttggctttggtgaa 204139
to top
>gb|AF117887.2| Mus musculus protein arginine methyltransferase (Carm1) mRNA,
           complete cds
          Length = 3124

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 419 cagaagttggctttggtgaa 438
           ||||||||||||||||||||
Sbjct: 965 cagaagttggctttggtgaa 946
to top
>ref|XM_598445.2| PREDICTED: Bos taurus similar to Chloride channel protein 6 (ClC-6),
            transcript variant 1 (LOC520210), mRNA
          Length = 2797

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 264  gaccaccgtcgtggtgtttgtggc 287
            ||||||||| ||||||||||||||
Sbjct: 1336 gaccaccgtggtggtgtttgtggc 1359
to top
>ref|XM_877634.1| PREDICTED: Bos taurus similar to Chloride channel protein 6 (ClC-6),
            transcript variant 2 (LOC520210), mRNA
          Length = 1567

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 264  gaccaccgtcgtggtgtttgtggc 287
            ||||||||| ||||||||||||||
Sbjct: 1336 gaccaccgtggtggtgtttgtggc 1359
to top
>gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0480H08, complete sequence
          Length = 156301

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   cctcgccgccgtcttcgtcg 252
             ||||||||||||||||||||
Sbjct: 34671 cctcgccgccgtcttcgtcg 34690
to top
>ref|XM_808184.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506367.174) partial mRNA
          Length = 408

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 tcgtcgttgtgcacgacgac 266
           ||||||||||||||||||||
Sbjct: 369 tcgtcgttgtgcacgacgac 350
to top
>ref|XM_811489.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506629.90) partial mRNA
          Length = 408

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 tcgtcgttgtgcacgacgac 266
           ||||||||||||||||||||
Sbjct: 369 tcgtcgttgtgcacgacgac 350
to top
>gb|AC124538.4| Mus musculus BAC clone RP23-338P10 from chromosome 1, complete sequence
          Length = 181512

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 96    gtagcaagccagcaaagctctgaa 119
             ||||||||| ||||||||||||||
Sbjct: 10006 gtagcaagcaagcaaagctctgaa 10029
to top
>gb|AC124175.2| Mus musculus BAC clone RP23-183N18 from 1, complete sequence
          Length = 227946

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 96    gtagcaagccagcaaagctctgaa 119
             ||||||||| ||||||||||||||
Sbjct: 21830 gtagcaagcaagcaaagctctgaa 21807
to top
>ref|NM_001030041.2| Rattus norvegicus protein arginine N-methyltransferase 4 (Prmt4),
            transcript variant 1, mRNA
          Length = 3209

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 419  cagaagttggctttggtgaa 438
            ||||||||||||||||||||
Sbjct: 1015 cagaagttggctttggtgaa 996
to top
>ref|NM_001034087.1| Rattus norvegicus protein arginine N-methyltransferase 4 (Prmt4),
            transcript variant 3, mRNA
          Length = 3666

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 419  cagaagttggctttggtgaa 438
            ||||||||||||||||||||
Sbjct: 1031 cagaagttggctttggtgaa 1012
to top
>ref|NM_001034088.1| Rattus norvegicus protein arginine N-methyltransferase 4 (Prmt4),
            transcript variant 4, mRNA
          Length = 3190

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 419  cagaagttggctttggtgaa 438
            ||||||||||||||||||||
Sbjct: 1031 cagaagttggctttggtgaa 1012
to top
>ref|NM_001034086.1| Rattus norvegicus protein arginine N-methyltransferase 4 (Prmt4),
            transcript variant 2, mRNA
          Length = 3389

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 419  cagaagttggctttggtgaa 438
            ||||||||||||||||||||
Sbjct: 1031 cagaagttggctttggtgaa 1012
to top
>ref|NM_021531.2| Mus musculus protein arginine N-methyltransferase 4 (Prmt4), mRNA
          Length = 3124

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 419 cagaagttggctttggtgaa 438
           ||||||||||||||||||||
Sbjct: 965 cagaagttggctttggtgaa 946
to top
>dbj|AB214954.1| Streptomyces griseus griE, griF genes for copper chaperon,
           ortho-aminophenol oxidase, complete cds
          Length = 1530

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 ggccgcgtgcagcggggtgg 167
           ||||||||||||||||||||
Sbjct: 367 ggccgcgtgcagcggggtgg 348
to top
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OSJNBa0095C06, from Chromosome 10,
             complete sequence
          Length = 156159

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   ctcgccgccgtcttcgtcgt 253
             ||||||||||||||||||||
Sbjct: 50514 ctcgccgccgtcttcgtcgt 50533
to top
>dbj|AK158242.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
            library, clone:F930045G01 product:coactivator-associated
            arginine methyltransferase 1, full insert sequence
          Length = 3154

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 419  cagaagttggctttggtgaa 438
            ||||||||||||||||||||
Sbjct: 1020 cagaagttggctttggtgaa 1001
to top
>dbj|AK158757.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched
           library, clone:K230313H13 product:coactivator-associated
           arginine methyltransferase 1, full insert sequence
          Length = 3052

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 419 cagaagttggctttggtgaa 438
           ||||||||||||||||||||
Sbjct: 895 cagaagttggctttggtgaa 876
to top
>gb|BC003964.1| Mus musculus protein arginine N-methyltransferase 4, mRNA (cDNA
           clone IMAGE:3488182), partial cds
          Length = 2336

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 419 cagaagttggctttggtgaa 438
           ||||||||||||||||||||
Sbjct: 162 cagaagttggctttggtgaa 143
to top
>gb|BC071267.1| Mus musculus protein arginine N-methyltransferase 4, mRNA (cDNA clone
            IMAGE:6393606), with apparent retained intron
          Length = 3414

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 419  cagaagttggctttggtgaa 438
            ||||||||||||||||||||
Sbjct: 1171 cagaagttggctttggtgaa 1152
to top
>gb|BC036974.1| Mus musculus protein arginine N-methyltransferase 4, mRNA (cDNA clone
            MGC:46828 IMAGE:4935077), complete cds
          Length = 3171

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 419  cagaagttggctttggtgaa 438
            ||||||||||||||||||||
Sbjct: 1039 cagaagttggctttggtgaa 1020
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                           
Query: 278     tgtttgtggcgctctgcgtggtgggcgcctggatgatgacgtcg 321
               |||| |||||||||||| | || ||||| ||||||||| |||||
Sbjct: 3966565 tgttcgtggcgctctgcctcgtcggcgcgtggatgatgtcgtcg 3966608
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 234      ctcgccgccgtcttcgtcgt 253
                ||||||||||||||||||||
Sbjct: 11466521 ctcgccgccgtcttcgtcgt 11466540
to top
>dbj|AB201117.1| Rattus norvegicus CARM1-v4 mRNA for coactivator-associated arginine
            methyltransferase 1 variant 4, complete cds
          Length = 3190

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 419  cagaagttggctttggtgaa 438
            ||||||||||||||||||||
Sbjct: 1031 cagaagttggctttggtgaa 1012
to top
>dbj|AB201116.1| Rattus norvegicus CARM1-v3 mRNA for coactivator-associated arginine
            methyltransferase 1 variant 3, complete cds
          Length = 3666

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 419  cagaagttggctttggtgaa 438
            ||||||||||||||||||||
Sbjct: 1031 cagaagttggctttggtgaa 1012
to top
>dbj|AB201115.1| Rattus norvegicus CARM1-v2 mRNA for coactivator-associated arginine
            methyltransferase 1 variant 2, complete cds
          Length = 3389

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 419  cagaagttggctttggtgaa 438
            ||||||||||||||||||||
Sbjct: 1031 cagaagttggctttggtgaa 1012
to top
>dbj|AB201114.1| Rattus norvegicus CARM1-v1 mRNA for coactivator-associated arginine
            methyltransferase 1 variant 1, complete cds
          Length = 3259

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 419  cagaagttggctttggtgaa 438
            ||||||||||||||||||||
Sbjct: 1031 cagaagttggctttggtgaa 1012
to top
>gb|AC026305.20| Homo sapiens 3 BAC RP11-91A15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 104150

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   tgtacatgtgctagtgggac 190
             ||||||||||||||||||||
Sbjct: 37641 tgtacatgtgctagtgggac 37622
to top
>ref|XM_221125.3| PREDICTED: Rattus norvegicus similar to tripartite
          motif-containing 65 (LOC303684), mRNA
          Length = 1384

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 42 ggagccgcgccccagctccc 61
          ||||||||||||||||||||
Sbjct: 28 ggagccgcgccccagctccc 47
to top
>gb|AF202779.1|AF202779 Rhodobacter sphaeroides CcoP (ccoP) gene, partial cds; rdx operon
            gene, complete sequence
          Length = 6245

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  gcaggcggccctcgccgccg 243
            ||||||||||||||||||||
Sbjct: 5514 gcaggcggccctcgccgccg 5495
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 439     accgaggagacggcgacatc 458
               ||||||||||||||||||||
Sbjct: 2697465 accgaggagacggcgacatc 2697446



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     ccggcgaggtgcgcgcggtg 84
              ||||||||||||||||||||
Sbjct: 157990 ccggcgaggtgcgcgcggtg 157971
to top
>dbj|AK107496.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-D08, full
           insert sequence
          Length = 833

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 233 cctcgccgccgtcttcgtcg 252
           ||||||||||||||||||||
Sbjct: 388 cctcgccgccgtcttcgtcg 407
to top
>emb|AJ341642.1|HSA341642 Homo sapiens genomic sequence surrounding NotI site, clone
          NR1-CF19RS
          Length = 674

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 59 ccccggccggcgaggtgcgcgcgg 82
          |||||| |||||||||||||||||
Sbjct: 45 ccccggacggcgaggtgcgcgcgg 68
to top
>emb|AJ340862.1|HSA340862 Homo sapiens genomic sequence surrounding NotI site, clone
          NR1-ED2RS
          Length = 586

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 63 ggccggcgaggtgcgcgcgg 82
          ||||||||||||||||||||
Sbjct: 49 ggccggcgaggtgcgcgcgg 68
to top
>gb|AF175313.1|AF175313 Oncorhynchus mykiss cardiac sodium-calcium exchanger (NCX) mRNA,
            complete cds
          Length = 3302

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 268  accgtcgtggtgtttgtggcgctc 291
            |||| |||||||||||||||||||
Sbjct: 2562 accgccgtggtgtttgtggcgctc 2585
to top
>emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F12, complete
            sequence
          Length = 84361

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 62   cggccggcgaggtgcgcgcg 81
            ||||||||||||||||||||
Sbjct: 9240 cggccggcgaggtgcgcgcg 9259
to top
>emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124B04, complete
              sequence
          Length = 115564

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     cggccggcgaggtgcgcgcg 81
              ||||||||||||||||||||
Sbjct: 104187 cggccggcgaggtgcgcgcg 104206
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 234      ctcgccgccgtcttcgtcgt 253
                ||||||||||||||||||||
Sbjct: 11472961 ctcgccgccgtcttcgtcgt 11472980
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                           
Query: 278     tgtttgtggcgctctgcgtggtgggcgcctggatgatgacgtcg 321
               |||| |||||||||||| | || ||||| ||||||||| |||||
Sbjct: 3966539 tgttcgtggcgctctgcctcgtcggcgcgtggatgatgtcgtcg 3966582
to top
>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 132682

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 278  tgtttgtggcgctctgcgtggtgggcgcctggatgatgacgtcg 321
            |||| |||||||||||| | || ||||| ||||||||| |||||
Sbjct: 2973 tgttcgtggcgctctgcctcgtcggcgcgtggatgatgtcgtcg 3016
to top
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 152090

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                          
Query: 278    tgtttgtggcgctctgcgtggtgggcgcctggatgatgacgtcg 321
              |||| |||||||||||| | || ||||| ||||||||| |||||
Sbjct: 128541 tgttcgtggcgctctgcctcgtcggcgcgtggatgatgtcgtcg 128584
to top
>gb|M30609.1|MXARTMSD M.xanthus reverse transcriptase (Mx65-RT) gene, multicopy
            single-stranded DNA (msDNA) and RNA (msdRNA) genes,
            complete cds
          Length = 1640

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 63   ggccggcgaggtgcgcgcggtgtg 86
            ||||| ||||||||||||||||||
Sbjct: 1485 ggccgtcgaggtgcgcgcggtgtg 1462
to top
>emb|AL607108.17| Mouse DNA sequence from clone RP23-42F6 on chromosome 11, complete
              sequence
          Length = 202842

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     ggagccgcgccccagctccc 61
              ||||||||||||||||||||
Sbjct: 147553 ggagccgcgccccagctccc 147534
to top
>dbj|AB033571.1| Eptatretus burgeri hgPTPR2Ab mRNA, partial cds
          Length = 1878

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 277  gtgtttgtggcgctctgcgtggtg 300
            ||||||||||||||| ||||||||
Sbjct: 1225 gtgtttgtggcgctcagcgtggtg 1248


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,978,564
Number of Sequences: 3902068
Number of extensions: 2978564
Number of successful extensions: 97890
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97201
Number of HSP's gapped (non-prelim): 683
length of query: 467
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 445
effective length of database: 17,147,199,772
effective search space: 7630503898540
effective search space used: 7630503898540
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top