>ITA11_MOUSE (P61622) Integrin alpha-11 precursor|
          Length = 1188

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
 Frame = +1

Query: 289  GTRLLHLSKFISSQGTFGCDVEHNT-----------VSHVPQKNSGDS 399
            G RLL L  F + QG   C++  N+           +SH PQ+N  +S
Sbjct: 1016 GNRLLMLRDFFTDQGNTSCNIWGNSTEYRSTPTEEDLSHAPQRNHSNS 1063

>CI097_PONPY (Q5RCP1) Protein C9orf97 homolog|
          Length = 516

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 422 VYCCFSRLESPEFFCGTWDTVLCSTSH 342
           +Y C+  LE P++ C  W T LC   H
Sbjct: 172 LYYCYRDLEDPQWIC-AWQTALCQQLH 197

>CI097_HUMAN (Q5T7W7) Protein C9orf97|
          Length = 516

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 422 VYCCFSRLESPEFFCGTWDTVLCSTSH 342
           +Y C+  LE P++ C  W T LC   H
Sbjct: 172 LYYCYHDLEDPQWIC-AWQTALCQHLH 197

>USPB_PHOLL (P59988) Universal stress protein B|
          Length = 111

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 10/41 (24%), Positives = 24/41 (58%)
 Frame = +2

Query: 182 YLEKHEPSILVRKGSTNQEWLLGQSSGGTIFLSTLMGLVYY 304
           YL+ H+P +++R     ++++L  S  G + +  +  L++Y
Sbjct: 71  YLDHHDPEVVLRCERLRKQFILTSSLSGLVVICLISMLIWY 111


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,481,084
Number of Sequences: 219361
Number of extensions: 1256303
Number of successful extensions: 3405
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3404
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)